Psyllid ID: psy2674

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180---
Protein Sequence
MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVICSNIAEGRRLNVFKT
Secondary Structure (PSIPRED)
ccccEEEcccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHccccccEEEEEEEEEcccccEEEEEccccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHccccccccccEEEEcccccccccccccccccccccHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
cEEEEEEcccccccccccEEEEEEEccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccEEEEEEEcccccHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHcEEccccEEEEEccccccccccccccccccccHHHHHcccccccccc
Coil and Loop (DISEMBL)
mslipnarglkasdpqdtSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGicrdgdphyllleytdwGDLKQFLLATRkdskdksgsgkprvrslsTSQAVTMAYQVALGLehisdkrlihkdiaarnclissdLSVKISLSGLSKDTYQKEYYKYRWVICSNiaegrrlnvfkt
Flexible Loop (DISEMBL)
mslipnarglkasdpqdtSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATrkdskdksgsgkprvrslstsqaVTMAYQVALGLEHISDKRLIHKDIAARnclissdlsvkislsglskdtyqkeyYKYRWVIcsniaegrrlnvfkt
Low Complexity Region (SEG)
MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRkdskdksgsgkPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVICSNIAEGRRLNVFKT
Disordered region (IsUnstruct)
*********************************ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA***********************AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVICSNIAEGRRLN****
Disordered Region (DISOPRED)
MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL*******************LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVICSNIAEGRRLNVFKT
Disordered Region (DISEMBL)
MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR*******************SQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVICSNIAEGRRLNVFKT
Disordered Region (DISPRO)
MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVICSNIAEGRRLNVFK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVICSNIAEGRRLNVFKT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	183	2.2.26 [Sep-21-2011]
Q13308	1070	Inactive tyrosine-protein	no	N/A	0.852	0.145	0.473	1e-39
Q8BKG3	1062	Inactive tyrosine-protein	yes	N/A	0.770	0.132	0.506	1e-39
Q91048	1051	Inactive tyrosine-protein	yes	N/A	0.841	0.146	0.453	1e-37
B3MH43	1037	Tyrosine-protein kinase-l	N/A	N/A	0.797	0.140	0.465	8e-37
Q6AWJ9	1033	Tyrosine-protein kinase-l	yes	N/A	0.786	0.139	0.482	1e-36
B4P5Q9	1033	Tyrosine-protein kinase-l	N/A	N/A	0.786	0.139	0.482	1e-36
B4QC63	1029	Tyrosine-protein kinase-l	N/A	N/A	0.786	0.139	0.482	1e-36
B4HNW4	1029	Tyrosine-protein kinase-l	N/A	N/A	0.786	0.139	0.482	1e-36
B3NS99	1033	Tyrosine-protein kinase-l	N/A	N/A	0.786	0.139	0.482	1e-36
B4KPU0	1045	Tyrosine-protein kinase-l	N/A	N/A	0.786	0.137	0.465	2e-36

>sp|Q13308|PTK7_HUMAN Inactive tyrosine-protein kinase 7 OS=Homo sapiens GN=PTK7 PE=1 SV=2

 Score =  162 bits (410), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 79/167 (47%), Positives = 118/167 (70%), Gaps = 11/167 (6%)

Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD 62
            +  A+GL+    +  ++++ KSL  SKD++   +F+RE+++F KL+HA+VV+++G+CR+
Sbjct: 811 FLAKAQGLEEGVAE--TLVLVKSL-QSKDEQQQLDFRRELEMFGKLNHANVVRLLGLCRE 867

Query: 63  GDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI 122
            +PHY++LEY D GDLKQFL  ++  SKD+    +P    LST Q V +  QVALG+EH+
Sbjct: 868 AEPHYMVLEYVDLGDLKQFLRISK--SKDEKLKSQP----LSTKQKVALCTQVALGMEHL 921

Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
           S+ R +HKD+AARNCL+S+   VK+S  GLSKD Y  EYY +R  WV
Sbjct: 922 SNNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWV 968

Inactive tyrosine kinase involved in Wnt signaling pathway. Component of both the non-canonical (also known as the Wnt/planar cell polarity signaling) and the canonical Wnt signaling pathway. Functions in cell adhesion, cell migration, cell polarity, proliferation, actin cytoskeleton reorganization and apoptosis. Has a role in embryogenesis, epithelial tissue organization and angiogenesis.
Homo sapiens (taxid: 9606)

>sp|Q8BKG3|PTK7_MOUSE Inactive tyrosine-protein kinase 7 OS=Mus musculus GN=Ptk7 PE=1 SV=1

 Score =  162 bits (409), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 77/152 (50%), Positives = 111/152 (73%), Gaps = 11/152 (7%)

Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
           ++++ KSL  S+D++   +F+RE+++F KL+HA+VV+++G+CR+ +PHY++LEY D GDL
Sbjct: 817 TLVLVKSL-QSRDEQQQLDFRREVEMFGKLNHANVVRLLGLCREAEPHYMVLEYVDLGDL 875

Query: 79  KQFL-LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC 137
           KQFL ++  KD K KS       + LST Q V +  QVALG+EH+S+ R +HKD+AARNC
Sbjct: 876 KQFLRISKNKDEKLKS-------QPLSTKQKVALCSQVALGMEHLSNNRFVHKDLAARNC 928

Query: 138 LISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
           LIS+   VK+S  GLSKD Y  EYY +R  WV
Sbjct: 929 LISAQRQVKVSALGLSKDVYNSEYYHFRQAWV 960

Inactive tyrosine kinase involved in Wnt signaling pathway. Component of both the non-canonical (also known as the Wnt/planar cell polarity signaling) and the canonical Wnt signaling pathway. Functions in cell adhesion, cell migration, cell polarity, proliferation, actin cytoskeleton reorganization and apoptosis. Has a role in embryogenesis, epithelial tissue organization and angiogenesis.

Mus musculus (taxid: 10090)

>sp|Q91048|PTK7_CHICK Inactive tyrosine-protein kinase 7 OS=Gallus gallus GN=PTK7 PE=2 SV=1

 Score =  155 bits (393), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 74/163 (45%), Positives = 113/163 (69%), Gaps = 9/163 (5%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+   A D +  ++++ KSL  ++D++   +F+RE ++F KL+H +VV+++G+CR+ +PH
Sbjct: 794 AKAKGAEDAEGEALVLVKSL-QTRDEQLQLDFRREAEMFGKLNHVNVVRLLGLCREAEPH 852

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
           Y++LEY D GDLKQFL    + SK K  S KP+   LST   V++  QVALG+EH+S+ R
Sbjct: 853 YMVLEYVDLGDLKQFL----RISKSKDESLKPQ--PLSTKHKVSLCTQVALGMEHLSNGR 906

Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
            +H+D+AARNCL+S+   VK+S   LSKD Y  EYY +R  W+
Sbjct: 907 FVHRDLAARNCLVSAQRQVKVSALSLSKDVYNSEYYHFRQAWI 949

Inactive tyrosine kinase involved in Wnt signaling. pathway.

Gallus gallus (taxid: 9031)

>sp|B3MH43|PTK7_DROAN Tyrosine-protein kinase-like otk OS=Drosophila ananassae GN=otk PE=3 SV=1

 Score =  152 bits (385), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 99/146 (67%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
           +++ K+L   KD++A  EF+R++DL   + H  VV++ G+CR+ DPHY++LEYTDWGDLK
Sbjct: 785 LVLVKALNKVKDEQACQEFRRQLDLLRGISHKGVVRLFGLCREKDPHYMVLEYTDWGDLK 844

Query: 80  QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
           QFLLAT       S +       L+TSQ + +AYQ+A G++ I   R  H+D+A RNC+I
Sbjct: 845 QFLLATAGKVNTASAAATSSPPPLTTSQVLAVAYQIARGMDAIYRARFTHRDLATRNCVI 904

Query: 140 SSDLSVKISLSGLSKDTYQKEYYKYR 165
           SS+  VK+S   L KD Y +EY+K+R
Sbjct: 905 SSEFIVKVSYPALCKDKYSREYHKHR 930

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila ananassae (taxid: 7217)

>sp|Q6AWJ9|PTK7_DROME Tyrosine-protein kinase-like otk OS=Drosophila melanogaster GN=otk PE=1 SV=1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/147 (48%), Positives = 103/147 (70%), Gaps = 3/147 (2%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
           +++ K+L   KD++A  EF+R++DL   + H  VV++ G+CR+ DPHY++LEYTDWGDLK
Sbjct: 782 LVLVKALNKVKDEQACQEFRRQLDLLRAISHKGVVRLFGLCREKDPHYMVLEYTDWGDLK 841

Query: 80  QFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
           QFLLAT  K +   +GS  P    L+TSQ + +AYQ+A G++ I   R  H+D+A RNC+
Sbjct: 842 QFLLATAGKVNTATAGSSSP--PPLTTSQVLAVAYQIARGMDAIYRARFTHRDLATRNCV 899

Query: 139 ISSDLSVKISLSGLSKDTYQKEYYKYR 165
           ISS+  VK+S   L KD Y +EY+K+R
Sbjct: 900 ISSEFIVKVSYPALCKDKYSREYHKHR 926

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila melanogaster (taxid: 7227)

>sp|B4P5Q9|PTK7_DROYA Tyrosine-protein kinase-like otk OS=Drosophila yakuba GN=otk PE=3 SV=1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/147 (48%), Positives = 103/147 (70%), Gaps = 3/147 (2%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
           +++ K+L   KD++A  EF+R++DL   + H  VV++ G+CR+ DPHY++LEYTDWGDLK
Sbjct: 782 LVLVKALNKVKDEQACQEFRRQLDLLRAISHKGVVRLFGLCREKDPHYMVLEYTDWGDLK 841

Query: 80  QFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
           QFLLAT  K +   +GS  P    L+TSQ + +AYQ+A G++ I   R  H+D+A RNC+
Sbjct: 842 QFLLATAGKVNTATAGSSSP--PPLTTSQVLAVAYQIARGMDAIYRARFTHRDLATRNCV 899

Query: 139 ISSDLSVKISLSGLSKDTYQKEYYKYR 165
           ISS+  VK+S   L KD Y +EY+K+R
Sbjct: 900 ISSEFIVKVSYPALCKDKYSREYHKHR 926

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila yakuba (taxid: 7245)

>sp|B4QC63|PTK7_DROSI Tyrosine-protein kinase-like otk OS=Drosophila simulans GN=otk PE=3 SV=1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/147 (48%), Positives = 103/147 (70%), Gaps = 3/147 (2%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
           +++ K+L   KD++A  EF+R++DL   + H  VV++ G+CR+ DPHY++LEYTDWGDLK
Sbjct: 778 LVLVKALNKVKDEQACQEFRRQLDLLRAISHKGVVRLFGLCREKDPHYMVLEYTDWGDLK 837

Query: 80  QFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
           QFLLAT  K +   +GS  P    L+TSQ + +AYQ+A G++ I   R  H+D+A RNC+
Sbjct: 838 QFLLATAGKVNTATAGSSSP--PPLTTSQVLAVAYQIARGMDAIYRARFTHRDLATRNCV 895

Query: 139 ISSDLSVKISLSGLSKDTYQKEYYKYR 165
           ISS+  VK+S   L KD Y +EY+K+R
Sbjct: 896 ISSEFIVKVSYPALCKDKYSREYHKHR 922

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila simulans (taxid: 7240)

>sp|B4HNW4|PTK7_DROSE Tyrosine-protein kinase-like otk OS=Drosophila sechellia GN=otk PE=3 SV=1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/147 (48%), Positives = 103/147 (70%), Gaps = 3/147 (2%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
           +++ K+L   KD++A  EF+R++DL   + H  VV++ G+CR+ DPHY++LEYTDWGDLK
Sbjct: 778 LVLVKALNKVKDEQACQEFRRQLDLLRAISHKGVVRLFGLCREKDPHYMVLEYTDWGDLK 837

Query: 80  QFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
           QFLLAT  K +   +GS  P    L+TSQ + +AYQ+A G++ I   R  H+D+A RNC+
Sbjct: 838 QFLLATAGKVNTATAGSSSP--PPLTTSQVLAVAYQIARGMDAIYRARFTHRDLATRNCV 895

Query: 139 ISSDLSVKISLSGLSKDTYQKEYYKYR 165
           ISS+  VK+S   L KD Y +EY+K+R
Sbjct: 896 ISSEFIVKVSYPALCKDKYSREYHKHR 922

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila sechellia (taxid: 7238)

>sp|B3NS99|PTK7_DROER Tyrosine-protein kinase-like otk OS=Drosophila erecta GN=otk PE=3 SV=1

 Score =  152 bits (384), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 71/147 (48%), Positives = 103/147 (70%), Gaps = 3/147 (2%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
           +++ K+L   KD++A  EF+R++DL   + H  VV++ G+CR+ DPHY++LEYTDWGDLK
Sbjct: 782 LVLVKALNKVKDEQACQEFRRQLDLLRAISHKGVVRLFGLCREKDPHYMVLEYTDWGDLK 841

Query: 80  QFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
           QFLLAT  K +   +GS  P    L+TSQ + +AYQ+A G++ I   R  H+D+A RNC+
Sbjct: 842 QFLLATAGKVNTATAGSSSP--PPLTTSQVLAVAYQIARGMDAIYRARFTHRDLATRNCV 899

Query: 139 ISSDLSVKISLSGLSKDTYQKEYYKYR 165
           ISS+  VK+S   L KD Y +EY+K+R
Sbjct: 900 ISSEFIVKVSYPALCKDKYSREYHKHR 926

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila erecta (taxid: 7220)

>sp|B4KPU0|PTK7_DROMO Tyrosine-protein kinase-like otk OS=Drosophila mojavensis GN=otk PE=3 SV=1

 Score =  152 bits (383), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 68/146 (46%), Positives = 100/146 (68%), Gaps = 2/146 (1%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
           ++M K+L   KD++A  EF+R++DL   + H  VV++ G+CR+ DPHY++LEYTDWGDLK
Sbjct: 795 LVMVKALNKVKDEQACQEFRRQLDLLRAISHKGVVRLFGLCREKDPHYMVLEYTDWGDLK 854

Query: 80  QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
           QFLLAT       + +  P    L+TSQ + +AYQ+A G++ I   R  H+D+A RNC+I
Sbjct: 855 QFLLATAGKVNTATATSSP--PPLTTSQLLAVAYQIARGMDAIYRARFTHRDLATRNCVI 912

Query: 140 SSDLSVKISLSGLSKDTYQKEYYKYR 165
           SS+  VK++   L KD Y +EY+K+R
Sbjct: 913 SSEFIVKVAYPALCKDKYSREYHKHR 938

Acts as a calcium-dependent, homophilic cell adhesion molecule that regulates neural recognition during the development of the nervous system. Component of the repulsive Plexin signaling response to regulate motor axon guidance at the embryonic stage. Also component of a receptor complex that is required in the adult visual system to innervate the lamina layer; specific targeting of R1-R6 axons.

Drosophila mojavensis (taxid: 7230)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
307173150	942	Tyrosine-protein kinase-like 7 [Camponot	0.803	0.156	0.550	1e-43
328792325	990	PREDICTED: tyrosine-protein kinase-like	0.803	0.148	0.557	1e-43
380014239	517	PREDICTED: tyrosine-protein kinase-like	0.836	0.295	0.541	2e-43
350419258	1110	PREDICTED: tyrosine-protein kinase-like	0.803	0.132	0.550	3e-43
340709064	1092	PREDICTED: tyrosine-protein kinase-like	0.803	0.134	0.550	4e-43
307198546	1006	Tyrosine-protein kinase-like 7 [Harpegna	0.803	0.146	0.550	1e-42
383865062	1012	PREDICTED: tyrosine-protein kinase-like	0.803	0.145	0.543	1e-42
332031157	1128	Tyrosine-protein kinase-like 7 [Acromyrm	0.803	0.130	0.550	2e-42
156554986	1117	PREDICTED: tyrosine-protein kinase-like	0.775	0.127	0.545	1e-40
300794382	1070	inactive tyrosine-protein kinase 7 precu	0.852	0.145	0.473	1e-38

>gi|307173150|gb|EFN64250.1| Tyrosine-protein kinase-like 7 [Camponotus floridanus]

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 82/149 (55%), Positives = 119/149 (79%), Gaps = 2/149 (1%)

Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
           S++M KSL+++KD+ AL EFKR++DL  KL+H +VVK+IG+CR+ +P Y++LEYTDWGDL
Sbjct: 688 SLVMVKSLINTKDEIALQEFKRQLDLLHKLNHENVVKLIGLCREEEPDYMILEYTDWGDL 747

Query: 79  KQFLLATRKDSKDKSG--SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           KQFL+A+RKD+       S  PR   LS +Q ++++ Q A GL+H++D RL+HKDIAARN
Sbjct: 748 KQFLIASRKDNNPSPTHESKPPRAPQLSVAQILSLSNQAAKGLKHLADNRLVHKDIAARN 807

Query: 137 CLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           CLI+S+L++KISL  ++K+ YQ+EY K+R
Sbjct: 808 CLIASNLTIKISLPCMTKEPYQQEYTKHR 836

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328792325|ref|XP_394162.4| PREDICTED: tyrosine-protein kinase-like otk-like [Apis mellifera]

 Score =  181 bits (458), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 83/149 (55%), Positives = 118/149 (79%), Gaps = 2/149 (1%)

Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
           S++M KSL+++KD+ AL EFKR +DL  KL+H +VVK+IG+CR+ +P Y++LEYTDWGDL
Sbjct: 736 SLVMVKSLINTKDETALQEFKRHLDLLHKLNHENVVKLIGLCREEEPDYMILEYTDWGDL 795

Query: 79  KQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           KQFL+A+RKD  S     S  PR   LS +Q ++++ Q A GL+H++D RL+HKDIAARN
Sbjct: 796 KQFLIASRKDNTSSPTHESKAPRAPQLSVAQILSLSNQAAKGLKHLADTRLVHKDIAARN 855

Query: 137 CLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           CLI+S+L++KISL  ++K+ YQ+EY K+R
Sbjct: 856 CLIASNLTIKISLPCMTKEPYQQEYTKHR 884

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014239|ref|XP_003691147.1| PREDICTED: tyrosine-protein kinase-like otk-like [Apis florea]

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 84/155 (54%), Positives = 120/155 (77%), Gaps = 2/155 (1%)

Query: 13  SDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
           +D    S++M KSL+++KD+ AL EFKR +DL  KL+H +VVK+IG+CR+ +P Y++LEY
Sbjct: 257 ADGDKESLVMVKSLINTKDEIALQEFKRHLDLLHKLNHENVVKLIGLCREEEPDYMILEY 316

Query: 73  TDWGDLKQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           TDWGDLKQFL+A+RKD  S     S  PR   LS +Q ++++ Q A GL+H++D RL+HK
Sbjct: 317 TDWGDLKQFLIASRKDNTSSPTHESKPPRAPQLSVAQILSLSNQAAKGLKHLADTRLVHK 376

Query: 131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           DIAARNCLI+S+L++KISL  ++K+ YQ+EY K+R
Sbjct: 377 DIAARNCLIASNLTIKISLPCMTKEPYQQEYTKHR 411

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419258|ref|XP_003492122.1| PREDICTED: tyrosine-protein kinase-like otk-like [Bombus impatiens]

 Score =  179 bits (455), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 82/149 (55%), Positives = 118/149 (79%), Gaps = 2/149 (1%)

Query: 19   SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
            +++M KSL+++KD+ AL EFKR +DL  KL+H +VVK+IG+CR+ +P Y++LEYTDWGDL
Sbjct: 856  TLVMVKSLINTKDETALQEFKRHLDLLHKLNHENVVKLIGLCREEEPDYMILEYTDWGDL 915

Query: 79   KQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            KQFL+A+RKD  S     S  PR   LS +Q ++++ Q A GL+H++D RL+HKDIAARN
Sbjct: 916  KQFLIASRKDNNSSPTHESKPPRAPQLSVAQILSLSNQAAKGLKHLADSRLVHKDIAARN 975

Query: 137  CLISSDLSVKISLSGLSKDTYQKEYYKYR 165
            CLI+S+L++KISL  ++K+ YQ+EY K+R
Sbjct: 976  CLIASNLTIKISLPCMTKEPYQQEYTKHR 1004

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340709064|ref|XP_003393135.1| PREDICTED: tyrosine-protein kinase-like otk-like [Bombus terrestris]

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 82/149 (55%), Positives = 118/149 (79%), Gaps = 2/149 (1%)

Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
           +++M KSL+++KD+ AL EFKR +DL  KL+H +VVK+IG+CR+ +P Y++LEYTDWGDL
Sbjct: 838 TLVMVKSLINTKDETALQEFKRHLDLLHKLNHENVVKLIGLCREEEPDYMILEYTDWGDL 897

Query: 79  KQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           KQFL+A+RKD  S     S  PR   LS +Q ++++ Q A GL+H++D RL+HKDIAARN
Sbjct: 898 KQFLIASRKDNNSSPTHESKPPRAPQLSVAQILSLSNQAAKGLKHLADSRLVHKDIAARN 957

Query: 137 CLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           CLI+S+L++KISL  ++K+ YQ+EY K+R
Sbjct: 958 CLIASNLTIKISLPCMTKEPYQQEYTKHR 986

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307198546|gb|EFN79431.1| Tyrosine-protein kinase-like 7 [Harpegnathos saltator]

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 82/149 (55%), Positives = 115/149 (77%), Gaps = 2/149 (1%)

Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
           S++M KSL ++KD+ AL EFKR +DL  KL+H +VVK+IG+CR+ +P Y++LEYTDWGDL
Sbjct: 752 SLVMVKSLTNTKDEMALQEFKRHLDLLHKLNHENVVKLIGLCREEEPDYMILEYTDWGDL 811

Query: 79  KQFLLATRKDSKDKSG--SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           KQFL+A+RKDS       S  PR   LS +Q + ++ Q A GL+H++D RL+HKDIAARN
Sbjct: 812 KQFLIASRKDSNSSPTHESKPPRAPQLSVAQILALSNQAAKGLKHLADNRLVHKDIAARN 871

Query: 137 CLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           CLI+S+L++KISL  ++K+ Y +EY K+R
Sbjct: 872 CLIASNLTIKISLPCMTKEPYHQEYTKHR 900

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383865062|ref|XP_003707994.1| PREDICTED: tyrosine-protein kinase-like otk-like [Megachile rotundata]

 Score =  177 bits (449), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 81/149 (54%), Positives = 115/149 (77%), Gaps = 2/149 (1%)

Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
           S++M KSL ++KD+ AL EFKR +DL  KL H +VVK+IG+CR+ +P Y++LEYTDWGDL
Sbjct: 758 SLVMVKSLTNTKDETALQEFKRHLDLLHKLSHENVVKLIGLCREEEPDYMILEYTDWGDL 817

Query: 79  KQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           KQFL+A+RKD  S     +  PR   LS +Q ++++ Q A GL+H++D RL+HKDIAARN
Sbjct: 818 KQFLIASRKDNNSSPTQETKPPRAPQLSVAQILSLSNQAAKGLKHLADSRLVHKDIAARN 877

Query: 137 CLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           CLI+S+L++KIS   ++K+ YQ+EY K+R
Sbjct: 878 CLIASNLTIKISFPCMTKEPYQQEYTKHR 906

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332031157|gb|EGI70734.1| Tyrosine-protein kinase-like 7 [Acromyrmex echinatior]

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 82/149 (55%), Positives = 117/149 (78%), Gaps = 2/149 (1%)

Query: 19   SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
            S++M KSL ++KD+ AL EFKR +DL  KL+H +VVK+IG+CR+ +P Y++LEYTDWGDL
Sbjct: 874  SLVMVKSLTNTKDEIALQEFKRHLDLVHKLNHENVVKLIGLCREEEPDYMILEYTDWGDL 933

Query: 79   KQFLLATRKD--SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            KQFL+A+RKD  S     +  PR   LS +Q ++++ Q A GL+H++D RL+HKDIAARN
Sbjct: 934  KQFLIASRKDNNSSPTHETKVPRAPQLSVAQILSLSNQAAKGLKHLADNRLVHKDIAARN 993

Query: 137  CLISSDLSVKISLSGLSKDTYQKEYYKYR 165
            CLI+S+L++KISL  ++K+ YQ+EY K+R
Sbjct: 994  CLIASNLTIKISLPCMTKEPYQQEYTKHR 1022

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156554986|ref|XP_001602704.1| PREDICTED: tyrosine-protein kinase-like otk-like [Nasonia vitripennis]

 Score =  171 bits (432), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 78/143 (54%), Positives = 110/143 (76%), Gaps = 1/143 (0%)

Query: 24   KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
            K+L ++KD+  L EFKR +DL  KL+H HV ++IG+CRD +P Y+++EYTDWGDLK FLL
Sbjct: 868  KTLTNTKDENVLQEFKRHLDLLHKLNHEHVARLIGLCRDEEPDYMIIEYTDWGDLKTFLL 927

Query: 84   ATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
            A++ K+    +  GKPR   L+ +Q +++A Q A GL+HISD RL+HKD+AARNCLISS 
Sbjct: 928  ASKSKEMAASTDGGKPRAPQLTVAQILSLANQAARGLKHISDHRLVHKDVAARNCLISSA 987

Query: 143  LSVKISLSGLSKDTYQKEYYKYR 165
            L VKISLS ++K+ +Q+EY K++
Sbjct: 988  LHVKISLSCMTKEPHQQEYTKHK 1010

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|300794382|ref|NP_001179894.1| inactive tyrosine-protein kinase 7 precursor [Bos taurus] gi|296474480|tpg|DAA16595.1| TPA: PTK7 protein tyrosine kinase 7 [Bos taurus]

 Score =  164 bits (416), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 79/167 (47%), Positives = 118/167 (70%), Gaps = 11/167 (6%)

Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD 62
            +  A+GL+   P+  ++++ KSL  S+D++   +F+RE ++F KL+HA+VV+++G+CR+
Sbjct: 811 FLAKAQGLEEGSPE--TLVLVKSL-QSRDEQQQLDFRREFEMFGKLNHANVVRLLGLCRE 867

Query: 63  GDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI 122
            +PHY++LEY D GDLKQFL  ++  SKD+    +P    LST Q V +  QVALG+EH+
Sbjct: 868 AEPHYMVLEYVDLGDLKQFLRISK--SKDEKLKSQP----LSTKQKVGLCTQVALGMEHL 921

Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
           S+ R +HKD+AARNCL+S+   VK+S  GLSKD Y  EYY +R  WV
Sbjct: 922 SNNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWV 968

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	183
UNIPROTKB|C9JQR6	257	PTK7 "Inactive tyrosine-protei	0.846	0.603	0.469	1.9e-35
UNIPROTKB|H0Y8F1	365	PTK7 "Inactive tyrosine-protei	0.846	0.424	0.469	1.9e-35
ZFIN|ZDB-GENE-050522-216	1061	zgc:112211 "zgc:112211" [Danio	0.808	0.139	0.458	1.2e-34
UNIPROTKB|F1MWK8	1070	PTK7 "Uncharacterized protein"	0.846	0.144	0.451	1.5e-34
UNIPROTKB|Q13308	1070	PTK7 "Inactive tyrosine-protei	0.846	0.144	0.469	3.2e-34
MGI|MGI:1918711	1062	Ptk7 "PTK7 protein tyrosine ki	0.846	0.145	0.463	8.4e-34
UNIPROTKB|B4GBH0	1035	otk "Tyrosine-protein kinase-l	0.841	0.148	0.440	1e-33
UNIPROTKB|Q290N5	1037	otk "Tyrosine-protein kinase-l	0.841	0.148	0.440	1e-33
UNIPROTKB|B4MR28	1059	otk "Tyrosine-protein kinase-l	0.819	0.141	0.460	1.7e-33
UNIPROTKB|F1RRN0	1060	PTK7 "Uncharacterized protein"	0.846	0.146	0.457	2.9e-33

UNIPROTKB|C9JQR6 PTK7 "Inactive tyrosine-protein kinase 7" [Homo sapiens (taxid:9606)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 78/166 (46%), Positives = 114/166 (68%)

Query:     4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
             +  A+GL+     +T VL+ KSL  SKD++   +F+RE+++F KL+HA+VV+++G+CR+ 
Sbjct:    80 LAKAQGLEEG-VAETLVLV-KSL-QSKDEQQQLDFRRELEMFGKLNHANVVRLLGLCREA 136

Query:    64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
             +PHY++LEY D GDLKQFL  ++            + + LST Q V +  QVALG+EH+S
Sbjct:   137 EPHYMVLEYVDLGDLKQFLRISKSKDEKL------KSQPLSTKQKVALCTQVALGMEHLS 190

Query:   124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
             + R +HKD+AARNCL+S+   VK+S  GLSKD Y  EYY +R  WV
Sbjct:   191 NNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWV 236

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|H0Y8F1 PTK7 "Inactive tyrosine-protein kinase 7" [Homo sapiens (taxid:9606)]

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 78/166 (46%), Positives = 114/166 (68%)

Query:     4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
             +  A+GL+     +T VL+ KSL  SKD++   +F+RE+++F KL+HA+VV+++G+CR+ 
Sbjct:   107 LAKAQGLEEG-VAETLVLV-KSL-QSKDEQQQLDFRRELEMFGKLNHANVVRLLGLCREA 163

Query:    64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
             +PHY++LEY D GDLKQFL  ++            + + LST Q V +  QVALG+EH+S
Sbjct:   164 EPHYMVLEYVDLGDLKQFLRISKSKDEKL------KSQPLSTKQKVALCTQVALGMEHLS 217

Query:   124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
             + R +HKD+AARNCL+S+   VK+S  GLSKD Y  EYY +R  WV
Sbjct:   218 NNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWV 263

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-050522-216 zgc:112211 "zgc:112211" [Danio rerio (taxid:7955)]

 Score = 387 (141.3 bits), Expect = 1.2e-34, P = 1.2e-34
 Identities = 71/155 (45%), Positives = 110/155 (70%)

Query:    11 KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
             KA++ ++ +V++ KSL  ++D++   +F+ E D+F KL H++V +++GICR+ +PHY+++
Sbjct:   808 KAAEDEEETVVLVKSL-QTRDEQMQMDFRHECDMFAKLSHSNVARLLGICREVEPHYMIM 866

Query:    71 EYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
             EYTD GDLKQ+L  ++            +V+ LST Q V++  QVA G+EH+S++R +HK
Sbjct:   867 EYTDMGDLKQYLRVSKSKDEKV------KVQPLSTKQKVSVCLQVARGMEHLSNQRFVHK 920

Query:   131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
             D+AARNCLISS   +K+S  GLSKD Y  EYY YR
Sbjct:   921 DLAARNCLISSKRQIKVSSLGLSKDVYSSEYYHYR 955

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1MWK8 PTK7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 386 (140.9 bits), Expect = 1.5e-34, P = 1.5e-34
 Identities = 75/166 (45%), Positives = 114/166 (68%)

Query:     4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
             +  A+GL+   P+  ++++ KSL  S+D++   +F+RE ++F KL+HA+VV+++G+CR+ 
Sbjct:   812 LAKAQGLEEGSPE--TLVLVKSL-QSRDEQQQLDFRREFEMFGKLNHANVVRLLGLCREA 868

Query:    64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
             +PHY++LEY D GDLKQFL  ++            + + LST Q V +  QVALG+EH+S
Sbjct:   869 EPHYMVLEYVDLGDLKQFLRISKSKDEKL------KSQPLSTKQKVGLCTQVALGMEHLS 922

Query:   124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
             + R +HKD+AARNCL+S+   VK+S  GLSKD Y  EYY +R  WV
Sbjct:   923 NNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWV 968

GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IEA

GO:0090103 "cochlea morphogenesis" evidence=IEA

GO:0071300 "cellular response to retinoic acid" evidence=IEA

GO:0060484 "lung-associated mesenchyme development" evidence=IEA

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IEA

GO:0060026 "convergent extension" evidence=IEA

GO:0045198 "establishment of epithelial cell apical/basal polarity" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0003401 "axis elongation" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0001736 "establishment of planar polarity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|Q13308 PTK7 "Inactive tyrosine-protein kinase 7" [Homo sapiens (taxid:9606)]

 Score = 383 (139.9 bits), Expect = 3.2e-34, P = 3.2e-34
 Identities = 78/166 (46%), Positives = 114/166 (68%)

Query:     4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
             +  A+GL+     +T VL+ KSL  SKD++   +F+RE+++F KL+HA+VV+++G+CR+ 
Sbjct:   812 LAKAQGLEEG-VAETLVLV-KSL-QSKDEQQQLDFRRELEMFGKLNHANVVRLLGLCREA 868

Query:    64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
             +PHY++LEY D GDLKQFL  ++            + + LST Q V +  QVALG+EH+S
Sbjct:   869 EPHYMVLEYVDLGDLKQFLRISKSKDEKL------KSQPLSTKQKVALCTQVALGMEHLS 922

Query:   124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
             + R +HKD+AARNCL+S+   VK+S  GLSKD Y  EYY +R  WV
Sbjct:   923 NNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWV 968

GO:0005524 "ATP binding" evidence=IEA

GO:0007155 "cell adhesion" evidence=IEA

GO:0001736 "establishment of planar polarity" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0003401 "axis elongation" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0045198 "establishment of epithelial cell apical/basal polarity" evidence=IEA

GO:0060026 "convergent extension" evidence=IEA

GO:0060484 "lung-associated mesenchyme development" evidence=IEA

GO:0090103 "cochlea morphogenesis" evidence=IEA

GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IDA

GO:0016477 "cell migration" evidence=IMP

GO:0031532 "actin cytoskeleton reorganization" evidence=IMP

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=TAS

GO:0005887 "integral to plasma membrane" evidence=TAS

GO:0007165 "signal transduction" evidence=TAS

GO:0071300 "cellular response to retinoic acid" evidence=IMP

GO:0010976 "positive regulation of neuron projection development" evidence=IMP

MGI|MGI:1918711 Ptk7 "PTK7 protein tyrosine kinase 7" [Mus musculus (taxid:10090)]

 Score = 379 (138.5 bits), Expect = 8.4e-34, P = 8.4e-34
 Identities = 77/166 (46%), Positives = 114/166 (68%)

Query:     4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
             +  A+G++     +T VL+ KSL  S+D++   +F+RE+++F KL+HA+VV+++G+CR+ 
Sbjct:   804 LAKAQGVEEG-ATETLVLV-KSL-QSRDEQQQLDFRREVEMFGKLNHANVVRLLGLCREA 860

Query:    64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
             +PHY++LEY D GDLKQFL  ++            + + LST Q V +  QVALG+EH+S
Sbjct:   861 EPHYMVLEYVDLGDLKQFLRISKNKDEKL------KSQPLSTKQKVALCSQVALGMEHLS 914

Query:   124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
             + R +HKD+AARNCLIS+   VK+S  GLSKD Y  EYY +R  WV
Sbjct:   915 NNRFVHKDLAARNCLISAQRQVKVSALGLSKDVYNSEYYHFRQAWV 960

GO:0001736 "establishment of planar polarity" evidence=IMP

GO:0001843 "neural tube closure" evidence=IGI;IMP

GO:0003401 "axis elongation" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004714 "transmembrane receptor protein tyrosine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=IC

GO:0005911 "cell-cell junction" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0007155 "cell adhesion" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=ISO

GO:0016020 "membrane" evidence=IDA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016055 "Wnt receptor signaling pathway" evidence=IEA

GO:0016301 "kinase activity" evidence=IDA

GO:0016477 "cell migration" evidence=ISO

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0030054 "cell junction" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=ISO

GO:0042060 "wound healing" evidence=IGI

GO:0045198 "establishment of epithelial cell apical/basal polarity" evidence=IMP

GO:0060026 "convergent extension" evidence=IMP

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=ISO

GO:0060484 "lung-associated mesenchyme development" evidence=IMP

GO:0071300 "cellular response to retinoic acid" evidence=ISO

GO:0090103 "cochlea morphogenesis" evidence=IMP

GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IGI

UNIPROTKB|B4GBH0 otk "Tyrosine-protein kinase-like otk" [Drosophila persimilis (taxid:7234)]

 Score = 378 (138.1 bits), Expect = 1.0e-33, P = 1.0e-33
 Identities = 70/159 (44%), Positives = 106/159 (66%)

Query:    10 LKASDPQDTSV---LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
             +K  +P+ +++   ++ K+L   KD++A  EF+R++DL   + H  VV++ G+CR+ DPH
Sbjct:   771 IKEEEPEQSALEQLVLVKALNKVKDEQACQEFRRQLDLLRGISHKGVVRLFGLCREKDPH 830

Query:    67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
             Y++LEYTDWGDLKQFLLAT            P   +L+TSQ + +AYQ+A G++ I   R
Sbjct:   831 YMVLEYTDWGDLKQFLLATAGKVNTATATSSPP--ALTTSQVLAVAYQIARGMDAIYRSR 888

Query:   127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
               H+D+A RNC+ISS+  VK+S   L KD Y +EY+K+R
Sbjct:   889 CTHRDLATRNCVISSEFVVKVSYPALCKDKYSREYHKHR 927

GO:0004672 "protein kinase activity" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007155 "cell adhesion" evidence=ISS

GO:0031290 "retinal ganglion cell axon guidance" evidence=ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS

UNIPROTKB|Q290N5 otk "Tyrosine-protein kinase-like otk" [Drosophila pseudoobscura pseudoobscura (taxid:46245)]

 Score = 378 (138.1 bits), Expect = 1.0e-33, P = 1.0e-33
 Identities = 70/159 (44%), Positives = 106/159 (66%)

Query:    10 LKASDPQDTSV---LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
             +K  +P+ +++   ++ K+L   KD++A  EF+R++DL   + H  VV++ G+CR+ DPH
Sbjct:   773 IKEEEPEQSALEQLVLVKALNKVKDEQACQEFRRQLDLLRGISHKGVVRLFGLCREKDPH 832

Query:    67 YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
             Y++LEYTDWGDLKQFLLAT            P   +L+TSQ + +AYQ+A G++ I   R
Sbjct:   833 YMVLEYTDWGDLKQFLLATAGKVNTATATSSPP--ALTTSQVLAVAYQIARGMDAIYRSR 890

Query:   127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
               H+D+A RNC+ISS+  VK+S   L KD Y +EY+K+R
Sbjct:   891 CTHRDLATRNCVISSEFVVKVSYPALCKDKYSREYHKHR 929

GO:0004672 "protein kinase activity" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007155 "cell adhesion" evidence=ISS

GO:0031290 "retinal ganglion cell axon guidance" evidence=ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS

UNIPROTKB|B4MR28 otk "Tyrosine-protein kinase-like otk" [Drosophila willistoni (taxid:7260)]

 Score = 376 (137.4 bits), Expect = 1.7e-33, P = 1.7e-33
 Identities = 70/152 (46%), Positives = 100/152 (65%)

Query:    16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
             Q   ++M K+L   KD++A  EF+R++DL   L H  +V++ G+CR+ DPHYL+LEYTDW
Sbjct:   802 QQDQLVMVKALNKVKDEQACQEFRRQLDLLRALSHKGIVRLYGLCREKDPHYLVLEYTDW 861

Query:    76 GDLKQFLLAT--RXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             GDLKQFLLAT  +             +  L+TSQ + +AYQ+A G++ I   R  H+D+A
Sbjct:   862 GDLKQFLLATAGKVNTATTATSSTTPLPPLTTSQVLAVAYQIARGMDAIYRARFTHRDLA 921

Query:   134 ARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
              RNC+ISS+  VK+S   L KD Y +EY+K+R
Sbjct:   922 TRNCVISSEFIVKVSYPALCKDKYSREYHKHR 953

GO:0004672 "protein kinase activity" evidence=ISS

GO:0004872 "receptor activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0007155 "cell adhesion" evidence=ISS

GO:0031290 "retinal ganglion cell axon guidance" evidence=ISS

GO:0050839 "cell adhesion molecule binding" evidence=ISS

UNIPROTKB|F1RRN0 PTK7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 374 (136.7 bits), Expect = 2.9e-33, P = 2.9e-33
 Identities = 76/166 (45%), Positives = 112/166 (67%)

Query:     4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
             +  A+GL+     +T VL+ KSL  S+D++   +F+RE+++F KL H +VV+++G+CR+ 
Sbjct:   802 LAKAQGLEEG-VAETLVLV-KSL-QSRDEQQQLDFRRELEMFGKLSHPNVVRLLGLCREA 858

Query:    64 DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
             +PHY++LEY D GDLKQFL  ++            + + LST Q V +  QVALG+EH+S
Sbjct:   859 EPHYMVLEYVDLGDLKQFLRISKSKDEKL------KSQPLSTKQKVALCAQVALGMEHLS 912

Query:   124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--WV 167
             + R +HKD+AARNCL+S+   VK+S  GLSKD Y  EYY +R  WV
Sbjct:   913 NNRFVHKDLAARNCLVSAQRQVKVSALGLSKDVYNSEYYHFRQAWV 958

GO:0090179 "planar cell polarity pathway involved in neural tube closure" evidence=IEA

GO:0090103 "cochlea morphogenesis" evidence=IEA

GO:0071300 "cellular response to retinoic acid" evidence=IEA

GO:0060484 "lung-associated mesenchyme development" evidence=IEA

GO:0060070 "canonical Wnt receptor signaling pathway" evidence=IEA

GO:0060026 "convergent extension" evidence=IEA

GO:0045198 "establishment of epithelial cell apical/basal polarity" evidence=IEA

GO:0042060 "wound healing" evidence=IEA

GO:0031532 "actin cytoskeleton reorganization" evidence=IEA

GO:0016477 "cell migration" evidence=IEA

GO:0010976 "positive regulation of neuron projection development" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0003401 "axis elongation" evidence=IEA

GO:0001843 "neural tube closure" evidence=IEA

GO:0001736 "establishment of planar polarity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8BKG3	PTK7_MOUSE	No assigned EC number	0.5065	0.7704	0.1327	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	183
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	7e-64
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-49
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-49
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	5e-47
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	6e-44
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	5e-34
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	8e-32
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	7e-31
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	8e-31
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	1e-29
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	5e-29
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	8e-29
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	3e-28
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	5e-27
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	8e-27
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	5e-25
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-24
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-24
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	7e-24
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	8e-24
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	9e-24
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	1e-23
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	2e-23
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-23
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	4e-23
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	5e-23
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	6e-23
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	1e-21
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	4e-21
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	4e-21
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-21
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	6e-21
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	1e-20
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	6e-20
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	6e-20
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	8e-20
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	3e-19
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-19
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	4e-19
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	8e-19
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	1e-18
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-18
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	4e-18
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	5e-18
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	5e-18
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	5e-18
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-17
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-17
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-17
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	4e-17
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-17
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-16
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	3e-16
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	3e-16
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	1e-15
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-15
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-15
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-15
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-15
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-15
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	1e-14
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-14
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	3e-14
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-14
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	4e-14
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	6e-14
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-13
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	2e-13
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	4e-13
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-12
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-12
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	8e-12
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-11
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-11
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	4e-11
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-11
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	4e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-11
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	9e-11
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	1e-10
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-10
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-10
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	2e-10
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-10
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-10
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-10
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	2e-10
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-10
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	3e-10
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	4e-10
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	5e-10
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	1e-09
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	1e-09
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-09
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	2e-09
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-09
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-09
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-09
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	3e-09
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	3e-09
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	3e-09
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-09
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	1e-08
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-08
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-08
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	7e-08
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	7e-08
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	8e-08
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	9e-08
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	1e-07
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	2e-07
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	3e-07
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	4e-07
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	4e-07
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	1e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	1e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-06
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-06
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	2e-06
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	3e-06
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	4e-06
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	4e-06
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	4e-06
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-06
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-06
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	5e-06
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-06
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	6e-06
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	8e-06
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	8e-06
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	9e-06
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-05
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	2e-05
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-05
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	3e-05
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	3e-05
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-05
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	3e-05
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	4e-05
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	4e-05
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	5e-05
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	6e-05
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	8e-05
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	1e-04
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-04
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	1e-04
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-04
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	1e-04
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	2e-04
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-04
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-04
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-04
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	3e-04
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	4e-04
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	4e-04
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	5e-04
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	5e-04
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	5e-04
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	6e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	6e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	6e-04
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	6e-04
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	8e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	9e-04
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	9e-04
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	0.001
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.001
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	0.001
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	0.001
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	0.001
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	0.001
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	0.001
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	0.002
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	0.002
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	0.002
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	0.002
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	0.002
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	0.002
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.003
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	0.003
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	0.003
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	0.004

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score =  197 bits (503), Expect = 7e-64
 Identities = 76/157 (48%), Positives = 110/157 (70%), Gaps = 7/157 (4%)

Query: 10  LKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
            K  + +   ++++ K+L  +KD+    EF+RE+D+F KL H +VV+++G+CR+ +PHY+
Sbjct: 26  AKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYM 85

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           +LEYTD GDLKQFL AT+  SKD+     P    LST Q V +  Q+ALG++H+S+ R +
Sbjct: 86  ILEYTDLGDLKQFLRATK--SKDEKLKPPP----LSTKQKVALCTQIALGMDHLSNARFV 139

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           H+D+AARNCL+SS   VK+SL  LSKD Y  EYYK R
Sbjct: 140 HRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLR 176

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  160 bits (406), Expect = 2e-49
 Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 21/150 (14%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L     ++ + EF RE  +  KLDH +VVK++G+C + +P Y+++EY + GDL  +L 
Sbjct: 34  KTLKEDASEQQIEEFLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLR 93

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
             R                LS S  ++ A Q+A G+E++  K  IH+D+AARNCL+  +L
Sbjct: 94  KNRP--------------KLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL 139

Query: 144 SVKISLSGLSKDTYQKEYYK-------YRW 166
            VKIS  GLS+D Y  +YY+        RW
Sbjct: 140 VVKISDFGLSRDLYDDDYYRKRGGKLPIRW 169

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  160 bits (406), Expect = 2e-49
 Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 20/150 (13%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L     ++ + EF RE  +  KLDH ++VK++G+C + +P  +++EY   GDL  +L 
Sbjct: 34  KTLKEDASEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLR 93

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                        K R + LS S  ++ A Q+A G+E++  K  IH+D+AARNCL+  +L
Sbjct: 94  -------------KNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL 140

Query: 144 SVKISLSGLSKDTYQKEYYK-------YRW 166
            VKIS  GLS+D Y  +YYK        RW
Sbjct: 141 VVKISDFGLSRDLYDDDYYKVKGGKLPIRW 170

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  153 bits (390), Expect = 5e-47
 Identities = 55/154 (35%), Positives = 89/154 (57%), Gaps = 7/154 (4%)

Query: 11  KASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           K       +  +A K+L     +E   +F +E  +  KL H +VV+++G+C + +P YL+
Sbjct: 15  KLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLV 74

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY + GDL  +L  +R        S      +LS    ++ A Q+A G+E+++ K+ +H
Sbjct: 75  LEYMEGGDLLDYLRKSRPVFPSPEKS------TLSLKDLLSFAIQIAKGMEYLASKKFVH 128

Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           +D+AARNCL+  DL VKIS  GLS+D Y  +YY+
Sbjct: 129 RDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYR 162

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  146 bits (370), Expect = 6e-44
 Identities = 54/157 (34%), Positives = 85/157 (54%), Gaps = 15/157 (9%)

Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +G    D + T   +A K+L     +E   EF  E  +  KL H ++V+++G+C  G+P 
Sbjct: 17  KGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKLSHPNIVRLLGVCTQGEPL 76

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
           Y++ EY   GDL  FL                    L+    + MA Q+A G+E++  K 
Sbjct: 77  YIVTEYMPGGDLLDFLRKHG--------------EKLTLKDLLQMALQIAKGMEYLESKN 122

Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
            +H+D+AARNCL++ +L VKIS  GLS+D Y+ +YY+
Sbjct: 123 FVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYR 159

Length = 258

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  121 bits (304), Expect = 5e-34
 Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 1/153 (0%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
                 D  ++  K+L  +  ++A  +F+RE +L     H ++VK  G+C +GDP  ++ 
Sbjct: 28  HLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVF 87

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           EY + GDL +FL +   D+        P    L+ SQ + +A Q+A G+ +++ +  +H+
Sbjct: 88  EYMEHGDLNKFLRSHGPDAAFLKSPDSPMGE-LTLSQLLQIAVQIASGMVYLASQHFVHR 146

Query: 131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           D+A RNCL+  DL VKI   G+S+D Y  +YY+
Sbjct: 147 DLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYR 179

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score =  115 bits (290), Expect = 8e-32
 Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 7/164 (4%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           AR       +  +++  K L      +   +F+RE  L  + DH ++VK++G+C  G P 
Sbjct: 24  ARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRS-------LSTSQAVTMAYQVALGL 119
            LL EY  +GDL +FL      ++          R        LS ++ + +A QVA G+
Sbjct: 84  CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGM 143

Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
            ++S+++ +H+D+A RNCL+  ++ VKI+  GLS++ Y  +YYK
Sbjct: 144 AYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 187

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score =  113 bits (284), Expect = 7e-31
 Identities = 46/154 (29%), Positives = 86/154 (55%), Gaps = 5/154 (3%)

Query: 13  SDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLE 71
           +D  D  VL+A K L     D A  +F +E+ +  +L   ++ +++G+C    P  +++E
Sbjct: 40  NDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIME 99

Query: 72  YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD 131
           Y + GDL QFL    +    ++       +SLS S  + MA Q+A G+ ++     +H+D
Sbjct: 100 YMENGDLNQFL----QKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRD 155

Query: 132 IAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           +A RNCL+  + ++KI+  G+S++ Y  +YY+ +
Sbjct: 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQ 189

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score =  112 bits (282), Expect = 8e-31
 Identities = 53/149 (35%), Positives = 86/149 (57%), Gaps = 2/149 (1%)

Query: 15  PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           P+   +L+A   +    D A  +F RE +L   L H H+VK  G+C +GDP  ++ EY  
Sbjct: 31  PEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK 90

Query: 75  WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            GDL +FL A   D+   +   +P    L+ SQ + +A Q+A G+ +++ +  +H+D+A 
Sbjct: 91  HGDLNKFLRAHGPDAVLMAEGNRP--AELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT 148

Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           RNCL+  +L VKI   G+S+D Y  +YY+
Sbjct: 149 RNCLVGENLLVKIGDFGMSRDVYSTDYYR 177

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score =  109 bits (274), Expect = 1e-29
 Identities = 49/149 (32%), Positives = 83/149 (55%)

Query: 15  PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           P+   +L+A   +    + A  +F+RE +L   L H H+V+  G+C +G P  ++ EY  
Sbjct: 31  PEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMR 90

Query: 75  WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            GDL +FL +   D+K  +G        L+  Q + +A Q+A G+ +++    +H+D+A 
Sbjct: 91  HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLAT 150

Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           RNCL+   L VKI   G+S+D Y  +YY+
Sbjct: 151 RNCLVGQGLVVKIGDFGMSRDIYSTDYYR 179

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  108 bits (271), Expect = 5e-29
 Identities = 60/168 (35%), Positives = 94/168 (55%), Gaps = 10/168 (5%)

Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD 77
           TSV + K+L  + + +   EF++E +L   L H ++V ++G+C    P  +L EY   GD
Sbjct: 36  TSVAI-KTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGD 94

Query: 78  LKQFLLATRKDSKDKSGSGKPRVR-SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           L +FL+     S   + SG   V+ SL  S  + +A Q+A G+E++S    +H+D+AARN
Sbjct: 95  LHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARN 154

Query: 137 CLISSDLSVKISLSGLSKDTYQKEYYKY--------RWVICSNIAEGR 176
           CL+   L+VKIS  GLS+D Y  +YY+         RW+    I  G+
Sbjct: 155 CLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGK 202

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score =  107 bits (269), Expect = 8e-29
 Identities = 55/151 (36%), Positives = 86/151 (56%), Gaps = 3/151 (1%)

Query: 15  PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           P    +L+A   +      A  +F+RE +L   L H H+VK  G+C DGDP  ++ EY  
Sbjct: 31  PTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMK 90

Query: 75  WGDLKQFLLATRKDSKDKSGSGKPRVRS--LSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
            GDL +FL A   D+      G+PR     L  SQ + +A Q+A G+ +++ +  +H+D+
Sbjct: 91  HGDLNKFLRAHGPDAMILV-DGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDL 149

Query: 133 AARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           A RNCL+ ++L VKI   G+S+D Y  +YY+
Sbjct: 150 ATRNCLVGANLLVKIGDFGMSRDVYSTDYYR 180

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  105 bits (265), Expect = 3e-28
 Identities = 41/127 (32%), Positives = 80/127 (62%), Gaps = 5/127 (3%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           EF  E  +  + +  HVV+++G+   G P  +++E    GDLK +L + R ++++  G G
Sbjct: 55  EFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLG 114

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P     +  + + MA ++A G+ +++ K+ +H+D+AARNC+++ DL+VKI   G+++D 
Sbjct: 115 PP-----TLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDI 169

Query: 157 YQKEYYK 163
           Y+ +YY+
Sbjct: 170 YETDYYR 176

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score =  102 bits (257), Expect = 5e-27
 Identities = 47/140 (33%), Positives = 80/140 (57%), Gaps = 8/140 (5%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFL 82
           K++     +  +    +E  L   L H +++ ++ +C  DG+P ++L  Y +WG+LK FL
Sbjct: 41  KTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFL 100

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
              R    +         ++LST Q V MA Q+A G+ ++  + +IHKDIAARNC+I  +
Sbjct: 101 QQCRLGEANNP-------QALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE 153

Query: 143 LSVKISLSGLSKDTYQKEYY 162
           L VKI+ + LS+D +  +Y+
Sbjct: 154 LQVKITDNALSRDLFPMDYH 173

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score =  101 bits (254), Expect = 8e-27
 Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 16/158 (10%)

Query: 13  SDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
           S P   +V   K+L     D+   EF +E  L    +H ++VK++G+C   +P Y+++E 
Sbjct: 24  SGPIRVAV---KTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
            + GDL  +L   R +              L+  + + +   VA G  ++     IH+D+
Sbjct: 81  MEGGDLLSYLRDARVERFGPPL--------LTLKELLDICLDVAKGCVYLEQMHFIHRDL 132

Query: 133 AARNCLISS-----DLSVKISLSGLSKDTYQKEYYKYR 165
           AARNCL+S      D  VKI   GL++D Y+ +YY+  
Sbjct: 133 AARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKE 170

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 98.1 bits (244), Expect = 5e-25
 Identities = 53/160 (33%), Positives = 90/160 (56%), Gaps = 4/160 (2%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDP 65
           A G+  S P  T  +  K L  +  D+ L +   E++L   +  H +++ ++G+C    P
Sbjct: 33  AYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGP 92

Query: 66  HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRV--RSLSTSQAVTMAYQVALGLEHIS 123
            Y+++EY   G+L++FL A R    D +     +V    LS    V+ AYQVA G+E++ 
Sbjct: 93  LYVIVEYAAKGNLREFLRARRPPGPDYTFDI-TKVPEEQLSFKDLVSCAYQVARGMEYLE 151

Query: 124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
            +R IH+D+AARN L++ D  +KI+  GL++  +  +YYK
Sbjct: 152 SRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYK 191

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 96.4 bits (240), Expect = 1e-24
 Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 12/153 (7%)

Query: 14  DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           D  +  V + K+L  S  ++   +F  E  +  K +H ++V++IG+  +  P ++LLE  
Sbjct: 33  DAVELQVAV-KTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELM 91

Query: 74  DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             GDLK FL   R   +  S        SL+    +  A  VA G +++ +   IH+DIA
Sbjct: 92  AGGDLKSFLRENRPRPERPS--------SLTMKDLLFCARDVAKGCKYLEENHFIHRDIA 143

Query: 134 ARNCLISS---DLSVKISLSGLSKDTYQKEYYK 163
           ARNCL++        KI+  G+++D Y+  YY+
Sbjct: 144 ARNCLLTCKGPGRVAKIADFGMARDIYRASYYR 176

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 96.2 bits (239), Expect = 2e-24
 Identities = 51/177 (28%), Positives = 96/177 (54%), Gaps = 12/177 (6%)

Query: 9   GLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHY 67
           G  A +     VL+A K L       A ++F +EI +  +L + ++++++G+C   DP  
Sbjct: 34  GEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLC 93

Query: 68  LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL 127
           ++ EY + GDL QFL     +S     +  P   S+S +  + MA Q+A G+++++    
Sbjct: 94  MITEYMENGDLNQFLSQREIESTFTHANNIP---SVSIANLLYMAVQIASGMKYLASLNF 150

Query: 128 IHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGR 176
           +H+D+A RNCL+ +  ++KI+  G+S++ Y  +YY+         RW+   +I  G+
Sbjct: 151 VHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGK 207

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 95.0 bits (236), Expect = 7e-24
 Identities = 45/151 (29%), Positives = 86/151 (56%), Gaps = 5/151 (3%)

Query: 14  DPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
              +  VL+A K L    +  A ++F +EI +  +L   ++++++ +C   DP  ++ EY
Sbjct: 41  VSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEY 100

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
            + GDL QFL         +  + K  V ++S S  + MA Q+A G++++S    +H+D+
Sbjct: 101 MENGDLNQFLSRHEP----QEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDL 156

Query: 133 AARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           A RNCL+  + ++KI+  G+S++ Y  +YY+
Sbjct: 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDYYR 187

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 94.7 bits (235), Expect = 8e-24
 Identities = 42/147 (28%), Positives = 84/147 (57%), Gaps = 13/147 (8%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           EF  E  +       HVV+++G+   G P  +++E    GDLK +L + R ++++  G  
Sbjct: 55  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 114

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++ +     + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI   G+++D 
Sbjct: 115 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 169

Query: 157 YQKEYYK--------YRWVICSNIAEG 175
           Y+ +YY+         RW+   ++ +G
Sbjct: 170 YETDYYRKGGKGLLPVRWMAPESLKDG 196

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 94.4 bits (235), Expect = 9e-24
 Identities = 48/158 (30%), Positives = 81/158 (51%), Gaps = 20/158 (12%)

Query: 14  DPQD---TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYL 68
           DP        +  KSL HS +++   +F+REI++   LDH ++VK  G+C    G    L
Sbjct: 26  DPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRL 85

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY   G L+ +L   R                ++  + +  + Q+  G++++  +R I
Sbjct: 86  IMEYLPSGSLRDYLQRHRD--------------QINLKRLLLFSSQICKGMDYLGSQRYI 131

Query: 129 HKDIAARNCLISSDLSVKISLSGLSK-DTYQKEYYKYR 165
           H+D+AARN L+ S+  VKIS  GL+K     K+YY  +
Sbjct: 132 HRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVK 169

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 94.0 bits (234), Expect = 1e-23
 Identities = 50/160 (31%), Positives = 88/160 (55%), Gaps = 6/160 (3%)

Query: 7   ARGL-KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
           A GL   ++    +V M K     KD   L +   E+++   +  H +++ ++G+C    
Sbjct: 33  AVGLDNPNETSTVAVKMLKDDATEKD---LSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89

Query: 65  PHYLLLEYTDWGDLKQFLLATR-KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS 123
           P Y+++EY   G+L+ FL A R           +P   +L+    V+ AYQVA G+E ++
Sbjct: 90  PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA 149

Query: 124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
            K+ IH+D+AARN L++ D  +KI+  GL++D +  +YY+
Sbjct: 150 SKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYR 189

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 93.8 bits (233), Expect = 2e-23
 Identities = 44/136 (32%), Positives = 84/136 (61%), Gaps = 8/136 (5%)

Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKS 93
           A ++F +E+ +  +L   ++++++G+C D DP  ++ EY + GDL QFL +   D  DK 
Sbjct: 62  ARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLD--DKE 119

Query: 94  GSGKPRVR------SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
            +G   V       ++S S  + +A Q+A G++++S    +H+D+A RNCL+  +L++KI
Sbjct: 120 ENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKI 179

Query: 148 SLSGLSKDTYQKEYYK 163
           +  G+S++ Y  +YY+
Sbjct: 180 ADFGMSRNLYAGDYYR 195

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 93.1 bits (231), Expect = 2e-23
 Identities = 43/134 (32%), Positives = 81/134 (60%), Gaps = 9/134 (6%)

Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK---------DSKD 91
           E +L  +++H HV+K+ G C    P  L++EY  +G L+ FL  +RK          +++
Sbjct: 53  EFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRN 112

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
            S    P  R+L+    ++ A+Q++ G++++++ +L+H+D+AARN L++    +KIS  G
Sbjct: 113 SSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFG 172

Query: 152 LSKDTYQKEYYKYR 165
           LS+D Y+++ Y  R
Sbjct: 173 LSRDVYEEDSYVKR 186

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 92.2 bits (229), Expect = 4e-23
 Identities = 50/153 (32%), Positives = 84/153 (54%), Gaps = 18/153 (11%)

Query: 13  SDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLL 70
           SD Q     + KSL    D E + +F +E  +     H +V+ ++GIC   +G P  ++L
Sbjct: 19  SDGQKIHCAV-KSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPL-VVL 76

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
            Y   GDL+ F+   R ++ +      P V+ L     +    QVA G+E+++ K+ +H+
Sbjct: 77  PYMKHGDLRNFI---RSETHN------PTVKDL-----IGFGLQVAKGMEYLASKKFVHR 122

Query: 131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           D+AARNC++    +VK++  GL++D Y KEYY 
Sbjct: 123 DLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 92.4 bits (229), Expect = 5e-23
 Identities = 50/185 (27%), Positives = 99/185 (53%), Gaps = 19/185 (10%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+ T V + K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 27  AKGVVKDEPE-TRVAI-KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 84

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R + ++      P     S  + + MA ++A G+ +++  +
Sbjct: 85  LVIMELMTRGDLKSYLRSLRPEMENNPVQAPP-----SLKKMIQMAGEIADGMAYLNANK 139

Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D Y+ +YY+         RW+   ++ +G   
Sbjct: 140 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 196

Query: 179 NVFKT 183
            VF T
Sbjct: 197 -VFTT 200

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 92.8 bits (230), Expect = 6e-23
 Identities = 50/163 (30%), Positives = 90/163 (55%), Gaps = 2/163 (1%)

Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICR 61
           ++  A G+    P     +  K L     D+ L +   E+++   +  H +++ ++G C 
Sbjct: 29  VMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88

Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLE 120
              P Y+L+EY   G+L+++L A R    D S  + K     L+    V+ AYQVA G+E
Sbjct: 89  QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGME 148

Query: 121 HISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           +++ ++ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 149 YLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYK 191

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 88.9 bits (220), Expect = 1e-21
 Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 2/163 (1%)

Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 35  VMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 94

Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLE 120
              P Y+++EY   G+L+++L A R    +      +     LS    V+ AYQVA G+E
Sbjct: 95  QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGME 154

Query: 121 HISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           +++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 155 YLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 197

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 87.2 bits (216), Expect = 4e-21
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 19/162 (11%)

Query: 10  LKASD--PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC-----RD 62
           L   D      +V   K  +H+  +  + EF  E       DH +V+K+IG+C       
Sbjct: 20  LSQDDGSQLKVAVKTMKLDIHTYSE--IEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQ 77

Query: 63  GDPHYL-LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEH 121
             P  + +L +   GDL  FLL +R     +          L     +     +ALG+E+
Sbjct: 78  KIPKPMVILPFMKHGDLHSFLLYSRLGGLPEK---------LPLQTLLKFMVDIALGMEY 128

Query: 122 ISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           +S++  IH+D+AARNC++  D++V ++  GLSK  Y  +YY+
Sbjct: 129 LSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYR 170

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 87.4 bits (216), Expect = 4e-21
 Identities = 50/132 (37%), Positives = 77/132 (58%), Gaps = 8/132 (6%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL--ATRKD---SKD 91
           EF++E  L  +L H ++V ++G+     P  +L EY + GDL +FL+  +   D   S D
Sbjct: 53  EFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSD 112

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
           + G+ K    SL     + +A Q+A G+E++S    +HKD+AARN LI   L VKIS  G
Sbjct: 113 EDGTVK---SSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLG 169

Query: 152 LSKDTYQKEYYK 163
           LS++ Y  +YY+
Sbjct: 170 LSREIYSADYYR 181

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 85.8 bits (213), Expect = 4e-21
 Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 15/133 (11%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K +        L E  REI++  KL+H ++VK+ G+  D +  YL++EY + G LK  L 
Sbjct: 24  KIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLL- 82

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD- 142
                        K     LS  + + +  Q+  GLE++    +IH+D+   N L+ SD 
Sbjct: 83  -------------KENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDN 129

Query: 143 LSVKISLSGLSKD 155
             VK++  GLSK 
Sbjct: 130 GKVKLADFGLSKL 142

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 86.0 bits (214), Expect = 6e-21
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 16/148 (10%)

Query: 17  DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
            T  L+A K +   K  +      REI +  KL H ++V++  +  D D  YL++EY + 
Sbjct: 22  KTGKLVAIKVIKKKKIKKDRERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEG 81

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           GDL   L                +   LS  +A     Q+   LE++  K ++H+D+   
Sbjct: 82  GDLFDLLK---------------KRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPE 126

Query: 136 NCLISSDLSVKISLSGLSKDTYQKEYYK 163
           N L+  D  VK++  GL++     E   
Sbjct: 127 NILLDEDGHVKLADFGLARQLDPGEKLT 154

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 85.8 bits (212), Expect = 1e-20
 Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 10/145 (6%)

Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD 77
            + ++ K L  S   +   +F  E   +  L H+++++ +G C +  P+ L++E+   GD
Sbjct: 22  PAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81

Query: 78  LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC 137
           LK +L + RK     +    P   +L       MA ++ALGL H+     IH D+A RNC
Sbjct: 82  LKGYLRSCRK-----AELMTPDPTTLQR-----MACEIALGLLHLHKNNFIHSDLALRNC 131

Query: 138 LISSDLSVKISLSGLSKDTYQKEYY 162
           L+++DL+VKI   GLS + Y+++YY
Sbjct: 132 LLTADLTVKIGDYGLSHNKYKEDYY 156

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 83.8 bits (207), Expect = 6e-20
 Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 10/125 (8%)

Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
           F +E+  + +L+H +V++ +G C +  P+ L+LE+   GDLK +L   R +    +   +
Sbjct: 42  FLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYL---RSNRGMVAQMAQ 98

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
             V          MA +VA GL  +     IH D+A RNC +++DLSVKI   GL+ + Y
Sbjct: 99  KDVLQ-------RMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151

Query: 158 QKEYY 162
            ++YY
Sbjct: 152 PEDYY 156

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 83.6 bits (207), Expect = 6e-20
 Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 16/151 (10%)

Query: 14  DPQDTSVLMAKSLVHSKDDEALHE-FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
            P++  + +A     +    ++ E F +E  +  + DH H+VK+IG+  + +P ++++E 
Sbjct: 29  SPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMEL 87

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
              G+L+ +L    K S             L  +  +  +YQ++  L ++  KR +H+DI
Sbjct: 88  APLGELRSYL-QVNKYS-------------LDLASLILYSYQLSTALAYLESKRFVHRDI 133

Query: 133 AARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           AARN L+SS   VK+   GLS+    + YYK
Sbjct: 134 AARNVLVSSPDCVKLGDFGLSRYLEDESYYK 164

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 83.2 bits (206), Expect = 8e-20
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 21/148 (14%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L          EF RE  +  +LDH  +V++IG+C+ G+P  L++E    G L ++L 
Sbjct: 29  KTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYL- 86

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                 K +        R +  S    +A+QVA+G+ ++  K  +H+D+AARN L+ +  
Sbjct: 87  ------KKR--------REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH 132

Query: 144 SVKISLSGLSKDT-YQKEYYKY----RW 166
             KIS  G+S+      +YY+     RW
Sbjct: 133 QAKISDFGMSRALGAGSDYYRATTAGRW 160

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 82.4 bits (203), Expect = 3e-19
 Identities = 43/163 (26%), Positives = 89/163 (54%), Gaps = 2/163 (1%)

Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 32  VMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91

Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGS-GKPRVRSLSTSQAVTMAYQVALGLE 120
              P Y+++EY   G+L+++L A R    + S    +     ++    V+  YQVA G+E
Sbjct: 92  QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGME 151

Query: 121 HISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           +++ ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 152 YLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYK 194

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 81.6 bits (202), Expect = 3e-19
 Identities = 42/124 (33%), Positives = 65/124 (52%), Gaps = 13/124 (10%)

Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
           F +E  +  KL H  +V++  +C + +P Y++ EY   G L  FL         KSG G 
Sbjct: 48  FLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFL---------KSGEG- 97

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++  +  IH+D+AARN L+  +L  KI+  GL++   
Sbjct: 98  ---KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIE 154

Query: 158 QKEY 161
             EY
Sbjct: 155 DDEY 158

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 81.7 bits (202), Expect = 4e-19
 Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 21/145 (14%)

Query: 30  KDDEALH--EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
           K D+ L   +F++E+    +L H H++ +  +C  G+P Y++ E  + G L  FL     
Sbjct: 39  KSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFL----- 93

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                     P  + L  +  + MA QVA G+ ++ ++  IH+D+AARN L+  DL  K+
Sbjct: 94  --------RSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKV 145

Query: 148 SLSGLSK----DTYQKEYYK--YRW 166
           +  GL++    D Y     K  Y+W
Sbjct: 146 ADFGLARLIKEDVYLSSDKKIPYKW 170

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 81.2 bits (200), Expect = 8e-19
 Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 1/149 (0%)

Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           + T  +  K+L    +     EFK E  +  +L H ++V ++G+     P  ++  Y   
Sbjct: 33  EQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSH 92

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            DL +FL+     S   S      V+S L  +  V +  Q+A G+E +S   ++HKD+A 
Sbjct: 93  SDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLAT 152

Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           RN L+   L+VKIS  GL ++ Y  +YYK
Sbjct: 153 RNVLVFDKLNVKISDLGLFREVYAADYYK 181

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 80.1 bits (197), Expect = 1e-18
 Identities = 44/154 (28%), Positives = 79/154 (51%), Gaps = 23/154 (14%)

Query: 35  LHEFKREIDLFCKLDHAHVVKMIGIC-----RDGDPH-YLLLEYTDWGDLKQFLLATRKD 88
           + +F  E     + DH +V+++IG+C      +G P   ++L +   GDL  FLL +R  
Sbjct: 44  MEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLG 103

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
              +          L T   V     +A G+E++S K  IH+D+AARNC+++ +++V ++
Sbjct: 104 DCPQY---------LPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVA 154

Query: 149 LSGLSKDTYQKEYYK--------YRWVICSNIAE 174
             GLSK  Y  +YY+         +W+   ++A+
Sbjct: 155 DFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD 188

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 80.0 bits (197), Expect = 2e-18
 Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 17/154 (11%)

Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH------YLL 69
           Q  +V M K+ + S  D  + EF RE     + DH +V+K+IG+              ++
Sbjct: 28  QKVAVKMLKADIFSSSD--IEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVI 85

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           L +   GDL  FLL +R   +       P    L T   V     +A G+E++S K  IH
Sbjct: 86  LPFMKHGDLHTFLLMSRIGEE-------PFTLPLQT--LVRFMIDIASGMEYLSSKNFIH 136

Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           +D+AARNC+++ +++V ++  GLSK  Y  +YY+
Sbjct: 137 RDLAARNCMLNENMTVCVADFGLSKKIYSGDYYR 170

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 78.7 bits (194), Expect = 4e-18
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L    +  
Sbjct: 41  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQE 100

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                        ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 101 -------------VNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 147

Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 148 FGLSRLMTGDTY 159

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 79.0 bits (195), Expect = 5e-18
 Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 21/158 (13%)

Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD-GDPHY-L 68
           DP QD +  V+  K L HS  +  L +F+REI++   L H ++VK  G+C   G  +  L
Sbjct: 26  DPLQDNTGEVVAVKKLQHSTAEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRL 84

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   R+               L   + +  A Q+  G+E++  KR +
Sbjct: 85  VMEYLPYGSLRDYLQKHRE--------------RLDHRKLLLYASQICKGMEYLGSKRYV 130

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYR 165
           H+D+A RN L+ S+  VKI   GL+K   Q KEYYK R
Sbjct: 131 HRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVR 168

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 78.4 bits (193), Expect = 5e-18
 Identities = 45/145 (31%), Positives = 66/145 (45%), Gaps = 19/145 (13%)

Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ M K    S+D     EF  E  +  KL H  +V++ G+C    P Y++ EY   G
Sbjct: 30  DVAIKMIKEGSMSED-----EFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNG 84

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L    K                  SQ + M   V  G+ ++  K+ IH+D+AARN
Sbjct: 85  CLLNYLREHGK--------------RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARN 130

Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
           CL+     VK+S  GLS+     EY
Sbjct: 131 CLVDDQGCVKVSDFGLSRYVLDDEY 155

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 78.9 bits (194), Expect = 5e-18
 Identities = 44/146 (30%), Positives = 81/146 (55%), Gaps = 5/146 (3%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLL 69
           K     + ++ M K      D     +F  E+++ CKL  H +++ ++G C +    Y+ 
Sbjct: 25  KDGLKMNAAIKMLKEFASENDHR---DFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLI 128
           +EY  +G+L  FL  +R    D + + +    S L++ Q +  A  VA G++++S+K+ I
Sbjct: 82  IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFI 141

Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+AARN L+  +L+ KI+  GLS+
Sbjct: 142 HRDLAARNVLVGENLASKIADFGLSR 167

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 78.3 bits (193), Expect = 1e-17
 Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 18/151 (11%)

Query: 7   ARGLKASDPQ-DTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
           A GL  SD     +V M K   HS + EAL     E+ +   L +H ++V ++G C  G 
Sbjct: 56  AYGLSKSDAVMKVAVKMLKPTAHSSEREALMS---ELKIMSHLGNHENIVNLLGACTIGG 112

Query: 65  PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD 124
           P  ++ EY  +GDL  FL   R+               L+    ++ +YQVA G+  ++ 
Sbjct: 113 PILVITEYCCYGDLLNFLRRKRE-------------SFLTLEDLLSFSYQVAKGMAFLAS 159

Query: 125 KRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
           K  IH+D+AARN L++    VKI   GL++D
Sbjct: 160 KNCIHRDLAARNVLLTHGKIVKICDFGLARD 190

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 77.1 bits (190), Expect = 1e-17
 Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 14/125 (11%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           +F +E ++  + DH ++VK+IG+C    P Y+++E    G L  FL   RK         
Sbjct: 38  KFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFL---RKKKN------ 88

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
                 L+  + + M+   A G+E++  K  IH+D+AARNCL+  +  +KIS  G+S++ 
Sbjct: 89  -----RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREE 143

Query: 157 YQKEY 161
               Y
Sbjct: 144 EGGIY 148

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 75.9 bits (187), Expect = 4e-17
 Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 16/133 (12%)

Query: 29  SKDD-EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
            KDD  A   F  E  +   L H ++V+++G+   G+P Y++ EY   G L  +L     
Sbjct: 37  LKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYL----- 91

Query: 88  DSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
                    + R R+ ++ +Q +  A  V  G+E++ +K  +H+D+AARN L+S DL  K
Sbjct: 92  ---------RSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAK 142

Query: 147 ISLSGLSKDTYQK 159
           +S  GL+K+  Q 
Sbjct: 143 VSDFGLAKEASQG 155

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 75.8 bits (187), Expect = 4e-17
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 15/131 (11%)

Query: 27  VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR 86
             S+  +     +REI +  +L H ++V++I    D D  YL++EY + GDL  +L    
Sbjct: 34  KRSEKSKKDQTARREIRILRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLS--- 90

Query: 87  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
                       R   LS  +A  +A Q+  GLE++    +IH+D+   N L+  +  VK
Sbjct: 91  ------------RGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVVK 138

Query: 147 ISLSGLSKDTY 157
           I+  GL+K   
Sbjct: 139 IADFGLAKKLL 149

Length = 260

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 75.6 bits (186), Expect = 6e-17
 Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 19/145 (13%)

Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ M +    S+DD     F  E  +  KL H ++V++ G+C    P +++ EY   G
Sbjct: 30  DVAIKMIREGAMSEDD-----FIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANG 84

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L   +                L T   + M   V   +E++     IH+D+AARN
Sbjct: 85  CLLNYLRERKG--------------KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARN 130

Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
           CL+  D  VK+S  GL++     +Y
Sbjct: 131 CLVGEDNVVKVSDFGLARYVLDDQY 155

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 75.1 bits (184), Expect = 1e-16
 Identities = 41/120 (34%), Positives = 68/120 (56%), Gaps = 2/120 (1%)

Query: 37  EFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGS 95
           +F  E+++ CKL  H +++ ++G C      YL +EY   G+L  FL  +R    D + +
Sbjct: 41  DFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFA 100

Query: 96  GKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
                 S LS+ Q +  A  VA G++++S K+ IH+D+AARN L+  +   KI+  GLS+
Sbjct: 101 IANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR 160

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 74.3 bits (182), Expect = 3e-16
 Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 6/137 (4%)

Query: 29  SKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
           SKDD    +F  E+++ CKL  H +++ ++G C      YL +EY   G+L  FL  +R 
Sbjct: 47  SKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 104

Query: 88  DSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
              D + +      S LS+ Q +  A  VA G++++S K+ IH+D+AARN L+  +   K
Sbjct: 105 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 164

Query: 147 ISLSGLSKDTYQKEYYK 163
           I+  GLS+   Q+ Y K
Sbjct: 165 IADFGLSRG--QEVYVK 179

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 73.8 bits (181), Expect = 3e-16
 Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 22/158 (13%)

Query: 14  DP--QDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           DP    T  ++A K+L      +    +K+EI++   L H ++VK  G C +     L L
Sbjct: 26  DPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85

Query: 71  --EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
             EY   G L+ +L               P+   L+ +Q +  A Q+  G+ ++  +  I
Sbjct: 86  IMEYVPLGSLRDYL---------------PK-HKLNLAQLLLFAQQICEGMAYLHSQHYI 129

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYR 165
           H+D+AARN L+ +D  VKI   GL+K   +  EYY+ R
Sbjct: 130 HRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 167

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 72.2 bits (177), Expect = 1e-15
 Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 13/147 (8%)

Query: 17  DTSV--LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           DT V  ++ K L  +   +  +EF ++ D +  L H ++++ +G C +  P+ L+ EY +
Sbjct: 19  DTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCE 78

Query: 75  WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            GDLK +L       +    + +             MA ++A G+ H+     +H D+A 
Sbjct: 79  LGDLKSYL----SQEQWHRRNSQ-------LLLLQRMACEIAAGVTHMHKHNFLHSDLAL 127

Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEY 161
           RNC ++SDL+VK+   G+    Y+++Y
Sbjct: 128 RNCFLTSDLTVKVGDYGIGPSRYKEDY 154

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 71.9 bits (177), Expect = 1e-15
 Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 15/127 (11%)

Query: 27  VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR 86
           +    +EAL    +EIDL   L H ++VK IG     D  Y++LEY + G L+Q +    
Sbjct: 35  LEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQII---- 90

Query: 87  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
                K G           S      YQV  GL ++ ++ +IH+DI A N L + D  VK
Sbjct: 91  ----KKFG-------PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVK 139

Query: 147 ISLSGLS 153
           ++  G++
Sbjct: 140 LADFGVA 146

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 71.6 bits (176), Expect = 2e-15
 Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 14/137 (10%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L     D+   +F  E  +  + DH +++++ G+     P  ++ EY + G L +FL 
Sbjct: 38  KTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFL- 96

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
               D K             +  Q V M   +A G++++S+   +H+D+AARN L++S+L
Sbjct: 97  -RENDGK------------FTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL 143

Query: 144 SVKISLSGLSKDTYQKE 160
             K+S  GLS+     E
Sbjct: 144 VCKVSDFGLSRRLEDSE 160

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 71.2 bits (174), Expect = 2e-15
 Identities = 38/139 (27%), Positives = 71/139 (51%), Gaps = 14/139 (10%)

Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D + +  KS   +   +   +F +E  +  +  H ++V++IG+C    P Y+++E    G
Sbjct: 19  DNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           D   FL         ++   + +V+ L     + M    A G+E++  K  IH+D+AARN
Sbjct: 79  DFLTFL---------RTEGPRLKVKEL-----IQMVENAAAGMEYLESKHCIHRDLAARN 124

Query: 137 CLISSDLSVKISLSGLSKD 155
           CL++    +KIS  G+S++
Sbjct: 125 CLVTEKNVLKISDFGMSRE 143

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 71.0 bits (175), Expect = 3e-15
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 19/142 (13%)

Query: 17  DTSVLMA-KSL-VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEY 72
           DT  LMA KS+ +    +E L   +REI +   L H ++V+  G  RD + +   + LEY
Sbjct: 23  DTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEY 82

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
              G L   L       K      +P +R            Q+  GL ++    ++H+DI
Sbjct: 83  VSGGSLSSLL-------KKFGKLPEPVIRKY--------TRQILEGLAYLHSNGIVHRDI 127

Query: 133 AARNCLISSDLSVKISLSGLSK 154
              N L+ SD  VK++  G +K
Sbjct: 128 KGANILVDSDGVVKLADFGCAK 149

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 70.8 bits (173), Expect = 3e-15
 Identities = 40/118 (33%), Positives = 61/118 (51%), Gaps = 14/118 (11%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           +F  E  +  + DH ++VK+IG+C    P Y+++E    GD   FL   RK   +     
Sbjct: 38  KFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFL---RKKKDE----- 89

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
                 L T Q V  A   A G+ ++  K  IH+D+AARNCL+  +  +KIS  G+S+
Sbjct: 90  ------LKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSR 141

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 69.6 bits (170), Expect = 1e-14
 Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 18/146 (12%)

Query: 20  VLMAKSLVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
            +  K L +  +D AL  E  RE ++  +LD+ ++V+MIGIC + +   L++E  + G L
Sbjct: 24  TVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGIC-EAESWMLVMELAELGPL 82

Query: 79  KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
            +FL    K   +K+                 + +QV++G++++ +   +H+D+AARN L
Sbjct: 83  NKFL-QKNKHVTEKN--------------ITELVHQVSMGMKYLEETNFVHRDLAARNVL 127

Query: 139 ISSDLSVKISLSGLSKDTYQKE-YYK 163
           + +    KIS  GLSK     E YYK
Sbjct: 128 LVTQHYAKISDFGLSKALGADENYYK 153

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 68.8 bits (168), Expect = 2e-14
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           +F  E  +  KL H  +V++ G+C +  P  L+ E+ + G L  +L A R          
Sbjct: 45  DFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRG--------- 95

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
                  S    + M   V  G+ ++    +IH+D+AARNCL+  +  VK+S  G+++  
Sbjct: 96  -----KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFV 150

Query: 157 YQKEY 161
              +Y
Sbjct: 151 LDDQY 155

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 68.4 bits (167), Expect = 3e-14
 Identities = 40/135 (29%), Positives = 72/135 (53%), Gaps = 20/135 (14%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           E  RE ++  +LD+ ++V+MIG+C + +   L++E    G L +FL   + +        
Sbjct: 41  EMMREAEIMHQLDNPYIVRMIGVC-EAEALMLVMEMASGGPLNKFLSGKKDE-------- 91

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK-- 154
                 ++ S  V + +QV++G++++  K  +H+D+AARN L+ +    KIS  GLSK  
Sbjct: 92  ------ITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKAL 145

Query: 155 ---DTYQKEYYKYRW 166
              D+Y K     +W
Sbjct: 146 GADDSYYKARSAGKW 160

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 68.2 bits (167), Expect = 3e-14
 Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 13/125 (10%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           +F  E  +  KL H  ++++  +C   +P Y++ E   +G L ++L       +  +G  
Sbjct: 47  DFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYL-------QGGAG-- 97

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
               R+L   Q + MA QVA G+ ++  +  IH+D+AARN L+  +   K++  GL++  
Sbjct: 98  ----RALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVI 153

Query: 157 YQKEY 161
            +  Y
Sbjct: 154 KEDIY 158

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 68.0 bits (166), Expect = 4e-14
 Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 22/156 (14%)

Query: 14  DPQ--DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYL 68
           DP+  +T   +A KSL        + + K+EI++   L H ++VK  GIC +  G+   L
Sbjct: 26  DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 85

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPR-VRSLSTSQAVTMAYQVALGLEHISDKRL 127
           ++E+   G LK++L               PR    ++  Q +  A Q+  G++++  ++ 
Sbjct: 86  IMEFLPSGSLKEYL---------------PRNKNKINLKQQLKYAVQICKGMDYLGSRQY 130

Query: 128 IHKDIAARNCLISSDLSVKISLSGLSKDTY-QKEYY 162
           +H+D+AARN L+ S+  VKI   GL+K     KEYY
Sbjct: 131 VHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYY 166

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 67.4 bits (165), Expect = 6e-14
 Identities = 43/140 (30%), Positives = 69/140 (49%), Gaps = 17/140 (12%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K L      +A  E   E  +   +DH HVV+++GIC       L+ +    G L  ++ 
Sbjct: 42  KVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICL-SSQVQLITQLMPLGCLLDYV- 99

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
              ++ KD  GS             +    Q+A G+ ++ +KRL+H+D+AARN L+ +  
Sbjct: 100 ---RNHKDNIGS----------QYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ 146

Query: 144 SVKISLSGLSK--DTYQKEY 161
            VKI+  GL+K  D  +KEY
Sbjct: 147 HVKITDFGLAKLLDVDEKEY 166

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 15/141 (10%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K L   K  + + +F +E  +   LDH +++++ G+     P  ++ E    G L   L 
Sbjct: 29  KCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRL- 86

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                        K  +     S     A Q+A G+ ++  KR IH+D+AARN L++SD 
Sbjct: 87  ------------RKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD 134

Query: 144 SVKISLSGLSKDTYQ-KEYYK 163
            VKI   GL +   Q +++Y 
Sbjct: 135 KVKIGDFGLMRALPQNEDHYV 155

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 66.1 bits (162), Expect = 2e-13
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 14/138 (10%)

Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD 77
           T   +A  ++  +  E   +   EI +  K  H ++VK  G     D  ++++E+   G 
Sbjct: 24  TGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGS 83

Query: 78  LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC 137
           LK  L              K   ++L+ SQ   +  ++  GLE++    +IH+DI A N 
Sbjct: 84  LKDLL--------------KSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANI 129

Query: 138 LISSDLSVKISLSGLSKD 155
           L++SD  VK+   GLS  
Sbjct: 130 LLTSDGEVKLIDFGLSAQ 147

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 65.3 bits (159), Expect = 4e-13
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 14/125 (11%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           +F  E  +  KL H  +V++ G+C    P Y++ E+ + G L  +L       + + G  
Sbjct: 45  DFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYL-------RQRQGK- 96

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
                 LS    ++M   V  G+E++     IH+D+AARNCL+SS   VK+S  G+++  
Sbjct: 97  ------LSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYV 150

Query: 157 YQKEY 161
              EY
Sbjct: 151 LDDEY 155

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 63.8 bits (155), Expect = 1e-12
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 18/127 (14%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
           K D     F  E  +  KL H ++V+++G I  +G   Y+++E    G+L  FL      
Sbjct: 38  KCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNG--LYIVMELMSKGNLVNFL------ 89

Query: 89  SKDKSGSGKPRVRSL-STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                   + R R+L S  Q +  +  VA G+E++  K+L+H+D+AARN L+S D   K+
Sbjct: 90  --------RTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKV 141

Query: 148 SLSGLSK 154
           S  GL++
Sbjct: 142 SDFGLAR 148

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 63.0 bits (153), Expect = 3e-12
 Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 15/145 (10%)

Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++  V + K+L     ++   +F  E  +  + DH +++ + G+     P  ++
Sbjct: 25  LKLPGKREIPVAI-KTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL   + D +             +  Q V M   +A G++++SD   +H
Sbjct: 84  TEYMENGSLDAFL--RKHDGQ------------FTVIQLVGMLRGIASGMKYLSDMGYVH 129

Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN L++S+L  K+S  GLS+
Sbjct: 130 RDLAARNILVNSNLVCKVSDFGLSR 154

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 61.5 bits (149), Expect = 8e-12
 Identities = 39/145 (26%), Positives = 75/145 (51%), Gaps = 15/145 (10%)

Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ +V + K+L     ++   +F  E  +  +  H +++++ G+     P  ++
Sbjct: 26  LKMPGRKEVAVAI-KTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L ++L       +D  G         S+ Q V M   +A G++++SD   +H
Sbjct: 85  TEYMENGALDKYL-------RDHDGE-------FSSYQLVGMLRGIAAGMKYLSDMNYVH 130

Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN L++S+L  K+S  GLS+
Sbjct: 131 RDLAARNILVNSNLECKVSDFGLSR 155

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 61.3 bits (149), Expect = 1e-11
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 15/122 (12%)

Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDK 92
           EA+ + ++EI L  KL H ++V+ +G  R+ D  Y+ LE    G L + L         K
Sbjct: 44  EAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLL--------KK 95

Query: 93  SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
            GS    V  L T        Q+ LGLE++ D+  +H+DI   N L+ ++  VK++  G+
Sbjct: 96  YGSFPEPVIRLYTR-------QILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGM 148

Query: 153 SK 154
           +K
Sbjct: 149 AK 150

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 60.3 bits (147), Expect = 3e-11
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 16/118 (13%)

Query: 39  KREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
           K E ++  +L+ H  ++K+    +D +  Y +LEY   G+L Q++               
Sbjct: 49  KIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIR-------------- 94

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
            +  SL        A ++ L LE++  K +IH+D+   N L+  D+ +KI+  G +K 
Sbjct: 95  -KYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKV 151

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 59.9 bits (145), Expect = 4e-11
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 14/124 (11%)

Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL         K+  G 
Sbjct: 48  FLAEANLMKQLQHPRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL---------KTPEGI 97

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
                L+ ++ + MA Q+A G+  I  K  IH+D+ A N L+S  L  KI+  GL++   
Sbjct: 98  ----KLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIE 153

Query: 158 QKEY 161
             EY
Sbjct: 154 DNEY 157

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 19/155 (12%)

Query: 16  QDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGI-CRDGDPHYLLLEYT 73
           + T  + A   +H   DE    +  RE+      +  +VVK  G   ++G+   ++LEY 
Sbjct: 23  KPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEIS-IVLEYM 81

Query: 74  DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDI 132
           D G L   L         K G     V +        +A Q+  GL+++ + + +IH+DI
Sbjct: 82  DGGSLADLL--------KKVGKIPEPVLAY-------IARQILKGLDYLHTKRHIIHRDI 126

Query: 133 AARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWV 167
              N LI+S   VKI+  G+SK           +V
Sbjct: 127 KPSNLLINSKGEVKIADFGISKVLENTLDQCNTFV 161

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 60.0 bits (146), Expect = 4e-11
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFK-REIDLFCKLD---HAHVVKMIGICRDGDPH 66
           KA D      +  K +     +E +     REI L  +L+   H ++V+++ +C      
Sbjct: 17  KARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTD 76

Query: 67  -----YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEH 121
                 L+ E+ D  DL  +L         K G     ++ L          Q+  G++ 
Sbjct: 77  RELKLTLVFEHVDQ-DLATYL-----SKCPKPGLPPETIKDLM--------RQLLRGVDF 122

Query: 122 ISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           +   R++H+D+  +N L++SD  VKI+  GL++
Sbjct: 123 LHSHRIVHRDLKPQNILVTSDGQVKIADFGLAR 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 59.8 bits (143), Expect = 6e-11
 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 14/129 (10%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHA-HVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR 86
                + +  F REI +   L+H  ++VK+    +D    YL++EY D G L+  L    
Sbjct: 34  LESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLL---- 89

Query: 87  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-V 145
                       R   LS S+A+ +  Q+   LE++  K +IH+DI   N L+  D   V
Sbjct: 90  --------KKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVV 141

Query: 146 KISLSGLSK 154
           K+   GL+K
Sbjct: 142 KLIDFGLAK 150

Length = 384

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 58.6 bits (143), Expect = 9e-11
 Identities = 34/115 (29%), Positives = 59/115 (51%), Gaps = 15/115 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L H ++VK++ +       YL+ EY D  DLK++L                R
Sbjct: 47  REISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYL--------------DKR 91

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              LS +   ++ YQ+  GL +    R++H+D+  +N LI+ D  +K++  GL++
Sbjct: 92  PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLAR 146

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 58.3 bits (141), Expect = 1e-10
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 14/131 (10%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L     ++   +F  E  +  + DH +++ + G+     P  ++ E+ + G L  FL 
Sbjct: 38  KTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFL- 96

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                   +   G+      +  Q V M   +A G++++S+   +H+D+AARN L++S+L
Sbjct: 97  --------RQNDGQ-----FTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL 143

Query: 144 SVKISLSGLSK 154
             K+S  GLS+
Sbjct: 144 VCKVSDFGLSR 154

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 58.2 bits (141), Expect = 1e-10
 Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 17/145 (11%)

Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD 77
           T +  A  ++  + +E L +F  EID+  +  H ++V +       +  ++L+E+ D G 
Sbjct: 29  TGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGA 88

Query: 78  LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC 137
           L   +L                 R L+  Q   +  Q+   L  +   ++IH+D+ A N 
Sbjct: 89  LDSIMLELE--------------RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNI 134

Query: 138 LISSDLSVKIS---LSGLSKDTYQK 159
           L++ D  VK++   +S  +K T QK
Sbjct: 135 LLTLDGDVKLADFGVSAKNKSTLQK 159

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 58.3 bits (141), Expect = 1e-10
 Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 47/160 (29%)

Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFL-------------------------L 83
           H +VV ++G C + G P  +++EY  +G+L  +L                          
Sbjct: 70  HLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGK 129

Query: 84  ATRKDSKDKSGSGKPRV----RSLSTSQA-----------------VTMAYQVALGLEHI 122
             R DS   S S         +SLS  +                  ++ ++QVA G+E +
Sbjct: 130 KQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFL 189

Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           + ++ IH+D+AARN L+S +  VKI   GL++D Y+   Y
Sbjct: 190 ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY 229

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 58.5 bits (141), Expect = 2e-10
 Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 48/162 (29%)

Query: 49  DHAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRK---DSKDKSGSGKPRVRSL- 103
           +H +VV ++G C +   P  +++E+  +G+L  FL A R+     ++KS   + R R++ 
Sbjct: 69  NHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMV 128

Query: 104 -----------------------STSQAV--------------TM------AYQVALGLE 120
                                  STS +               TM      ++QVA G+E
Sbjct: 129 EQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGME 188

Query: 121 HISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
            ++ ++ IH+D+AARN L+S +  VKI   GL++D Y+   Y
Sbjct: 189 FLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY 230

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 58.1 bits (140), Expect = 2e-10
 Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 14/138 (10%)

Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           ++T VL A  ++ +K +E L ++  EID+    DH ++VK++      +  ++L+E+   
Sbjct: 27  KETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G +   +L                 R L+  Q   +  Q    L ++ + ++IH+D+ A 
Sbjct: 87  GAVDAVMLELE--------------RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAG 132

Query: 136 NCLISSDLSVKISLSGLS 153
           N L + D  +K++  G+S
Sbjct: 133 NILFTLDGDIKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 58.2 bits (140), Expect = 2e-10
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 33/135 (24%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGD--------PHYLLLEYTDWGDLKQFLLATRKD 88
           EF  E  +   +DH H+V+++G+C            PH  LL+Y               +
Sbjct: 55  EFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLDYV-------------HE 101

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
            KD  GS             +    Q+A G+ ++ ++RL+H+D+AARN L+ S   VKI+
Sbjct: 102 HKDNIGS----------QLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKIT 151

Query: 149 LSGLSK--DTYQKEY 161
             GL++  +  +KEY
Sbjct: 152 DFGLARLLEGDEKEY 166

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 57.7 bits (139), Expect = 2e-10
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 14/124 (11%)

Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
           F  E  +  KL H  +V++  +  + +P Y++ EY   G L  FL         K G G 
Sbjct: 48  FLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL---------KDGEG- 96

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              R+L     V MA QVA G+ +I     IH+D+ + N L+   L  KI+  GL++   
Sbjct: 97  ---RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIE 153

Query: 158 QKEY 161
             EY
Sbjct: 154 DNEY 157

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 58.3 bits (141), Expect = 2e-10
 Identities = 47/193 (24%), Positives = 74/193 (38%), Gaps = 59/193 (30%)

Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGD 77
           +V M K+  H+ + EAL     E+ +   L  H ++V ++G C  G P  ++ EY  +GD
Sbjct: 72  AVKMLKASAHTDEREALMS---ELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGD 128

Query: 78  LKQFL-----------------LATRKDSKD--------KSGSG---------------- 96
           L  FL                   T  D K+        +S SG                
Sbjct: 129 LLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS 188

Query: 97  --------------KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
                               L     +  + QVA G++ ++ K  IH+D+AARN L++  
Sbjct: 189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG 248

Query: 143 LSVKISLSGLSKD 155
              KI   GL++D
Sbjct: 249 RVAKICDFGLARD 261

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 58.1 bits (140), Expect = 2e-10
 Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 53/166 (31%)

Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRKD-----SKD------KSGSG- 96
           H +VV ++G C + G P  +++E+  +G+L  +L + R +     +KD      KSG G 
Sbjct: 70  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGD 129

Query: 97  -----KPRVRSLSTSQA-----------------------------------VTMAYQVA 116
                K R+ S+++SQ+                                   +  ++QVA
Sbjct: 130 ISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVA 189

Query: 117 LGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
            G+E ++ ++ IH+D+AARN L+S +  VKI   GL++D Y+   Y
Sbjct: 190 KGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY 235

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 57.4 bits (139), Expect = 3e-10
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 11/115 (9%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           +EIDL  +LDH +V+K +    + +   ++LE  D GDL + +   +K            
Sbjct: 51  KEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQK---------- 100

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
            R +          Q+   LEH+  KR++H+DI   N  I++   VK+   GL +
Sbjct: 101 -RLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGR 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 56.7 bits (138), Expect = 4e-10
 Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 11/115 (9%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
            E+ +  KL+H +++K      +     +++EY D GDL Q +   +K+ K         
Sbjct: 48  NEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGK--------- 98

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
                  Q +    Q+ L L+++  ++++H+DI  +N  ++S+  VK+   G+SK
Sbjct: 99  --PFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISK 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 57.2 bits (138), Expect = 5e-10
 Identities = 53/211 (25%), Positives = 82/211 (38%), Gaps = 65/211 (30%)

Query: 7   ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
           A GL  SD   T +V M K   H  + EAL     E+ +   L +H ++V ++G C  G 
Sbjct: 56  AYGLFKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHINIVNLLGACTVGG 112

Query: 65  PHYLLLEYTDWGDLKQFLLATRKD--------------------SKDKSGSG-------K 97
           P  ++ EY  +GDL  FL   R                       ++ S          K
Sbjct: 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMK 172

Query: 98  PRVRSLSTSQA---------------------------------VTMAYQVALGLEHISD 124
           P V  +  ++A                                 ++ +YQVA G+  ++ 
Sbjct: 173 PGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS 232

Query: 125 KRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
           K  IH+D+AARN L++     KI   GL++D
Sbjct: 233 KNCIHRDLAARNILLTHGRITKICDFGLARD 263

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 55.7 bits (134), Expect = 1e-09
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 23/137 (16%)

Query: 48  LDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQ 107
           LDHA++V+++GIC  G    L+ + +  G L   +   R               SL   +
Sbjct: 66  LDHAYIVRLLGIC-PGASLQLVTQLSPLGSLLDHVRQHRD--------------SLDPQR 110

Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY--QKEYY--- 162
            +    Q+A G+ ++ + R++H+++AARN L+ SD  V+I+  G++   Y   K+Y+   
Sbjct: 111 LLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSE 170

Query: 163 ---KYRWVICSNIAEGR 176
                +W+   +I  GR
Sbjct: 171 HKTPIKWMALESILFGR 187

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 55.4 bits (133), Expect = 1e-09
 Identities = 39/124 (31%), Positives = 59/124 (47%), Gaps = 14/124 (11%)

Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
           F +E  +  KL H  +V +  +  + +P Y++ E+   G L  FL         K G GK
Sbjct: 48  FLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMGKGSLLDFL---------KEGDGK 97

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
                L   Q V MA Q+A G+ +I     IH+D+ A N L+  +L  KI+  GL++   
Sbjct: 98  ----YLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIE 153

Query: 158 QKEY 161
             EY
Sbjct: 154 DNEY 157

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 55.3 bits (133), Expect = 1e-09
 Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 13/104 (12%)

Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKP 98
           K+E+ L  K+ H ++V      ++    ++++EY D GDL + +              + 
Sbjct: 47  KKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRI-------------NRQ 93

Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
           R    S  Q ++   Q++LGL+HI D++++H+DI ++N  +S +
Sbjct: 94  RGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKN 137

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 55.2 bits (133), Expect = 1e-09
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 13/115 (11%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
            E  +  KLD +++++      D     +++EY + GDL + L   R             
Sbjct: 48  DEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRG------------ 95

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
            R L   Q      Q+ LGL H+  K+++H+DI + N  + +  +VKI   G++K
Sbjct: 96  -RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAK 149

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 15/115 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI       H +VVK++ +   G    L++EY    DL + L              +  
Sbjct: 48  REIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVL--------------RDE 92

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
            R L  +Q  +    +  G+ ++    ++H+D+   N LIS+D  +KI+  GL++
Sbjct: 93  ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLAR 147

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 55.4 bits (133), Expect = 2e-09
 Identities = 30/138 (21%), Positives = 68/138 (49%), Gaps = 14/138 (10%)

Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           ++T  L A  ++ +K +E L ++  EI++    +H ++VK++G        ++++E+   
Sbjct: 34  KETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPG 93

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G +   +L                 R L+  Q   +  Q+   L+++   ++IH+D+ A 
Sbjct: 94  GAVDAIMLELD--------------RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAG 139

Query: 136 NCLISSDLSVKISLSGLS 153
           N L++ D  +K++  G+S
Sbjct: 140 NVLLTLDGDIKLADFGVS 157

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 14/122 (11%)

Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKD 91
           +E L E  +EI +  + D  ++VK  G        ++++EY   G +   +  T K    
Sbjct: 39  EEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNK---- 94

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
                     +L+  +   + YQ   GLE++   + IH+DI A N L++ +   K++  G
Sbjct: 95  ----------TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFG 144

Query: 152 LS 153
           +S
Sbjct: 145 VS 146

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 54.3 bits (130), Expect = 3e-09
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 14/124 (11%)

Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL         K   GK
Sbjct: 48  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFL---------KGEMGK 97

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
                L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 98  ----YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 153

Query: 158 QKEY 161
             EY
Sbjct: 154 DNEY 157

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 54.5 bits (132), Expect = 3e-09
 Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 18/123 (14%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
           REI L  KL H ++V++  I         Y++ EY D  DL   L     + K       
Sbjct: 47  REIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLD--SPEVK------- 96

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
                 + SQ      Q+  GL+++    ++H+DI   N LI++D  +K++  GL++  Y
Sbjct: 97  -----FTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLAR-PY 150

Query: 158 QKE 160
            K 
Sbjct: 151 TKR 153

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 54.6 bits (131), Expect = 3e-09
 Identities = 42/158 (26%), Positives = 78/158 (49%), Gaps = 18/158 (11%)

Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 25  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 84

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++    ++ KD  GS             +    Q+A G+ ++ ++R
Sbjct: 85  -LITQLMPFGCLLDYV----REHKDNIGS----------QYLLNWCVQIAKGMNYLEERR 129

Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 130 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYH 167

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 54.2 bits (130), Expect = 3e-09
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
            +L     D+    F  E     + DH+++V++ G+   G+   ++ EY   G L  FL 
Sbjct: 39  HTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFL- 97

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
             RK               L   Q + M   +A G++++S+   +HK +AA   L++SDL
Sbjct: 98  --RKHEG-----------QLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL 144

Query: 144 SVKIS 148
             KIS
Sbjct: 145 VCKIS 149

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 53.9 bits (129), Expect = 4e-09
 Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 13/128 (10%)

Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKS 93
           ++  F  E +L   L H  +V++  +    +P Y++ EY   G L  FL       K   
Sbjct: 44  SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFL-------KSDE 96

Query: 94  GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           G        +   + +  + Q+A G+ +I  K  IH+D+ A N L+S  L  KI+  GL+
Sbjct: 97  GG------KVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 150

Query: 154 KDTYQKEY 161
           +     EY
Sbjct: 151 RVIEDNEY 158

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 20/132 (15%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L+H +++K++ + R     YL+ E+ D  DL + +              K R
Sbjct: 47  REIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-TDLYKLI--------------KDR 91

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL-----SK 154
            R L  S   +  YQ+  GL       ++H+D+   N LI+++  +K++  GL     S 
Sbjct: 92  QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151

Query: 155 DTYQKEYYKYRW 166
                 Y   RW
Sbjct: 152 VRPYTHYVVTRW 163

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 51.8 bits (124), Expect = 2e-08
 Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 27/133 (20%)

Query: 18  TSVLMAKSLV------HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHY-LLL 70
           T  LMA   V       S+ +E +   ++EI L  +L+H H+++M+G   + D H+ L +
Sbjct: 24  TGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE-DSHFNLFV 82

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAY--QVALGLEHISDKRLI 128
           E+   G +   L         K G         +  +AV + Y  Q+  GL ++ + ++I
Sbjct: 83  EWMAGGSVSHLL--------SKYG---------AFKEAVIINYTEQLLRGLSYLHENQII 125

Query: 129 HKDIAARNCLISS 141
           H+D+   N LI S
Sbjct: 126 HRDVKGANLLIDS 138

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 51.0 bits (122), Expect = 4e-08
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+     D+   SG     
Sbjct: 48  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFM-----DASPLSG----- 96

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              +      +  +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 97  ---IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 50.4 bits (120), Expect = 7e-08
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 16/128 (12%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
           K+D     F  E  +  +L H+++V+++G I  +    Y++ EY   G L  +L      
Sbjct: 38  KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL------ 91

Query: 89  SKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                   + R RS L     +  +  V   +E++     +H+D+AARN L+S D   K+
Sbjct: 92  --------RSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKV 143

Query: 148 SLSGLSKD 155
           S  GL+K+
Sbjct: 144 SDFGLTKE 151

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 50.2 bits (121), Expect = 7e-08
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 19/132 (14%)

Query: 40  REIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKP 98
           RE+    KL +H ++VK+  + R+ D  Y + EY + G+L Q L+  RK        GKP
Sbjct: 46  REVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYME-GNLYQ-LMKDRK--------GKP 95

Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
                S S   ++ YQ+  GL HI      H+D+   N L+S    VKI+  GL+++   
Sbjct: 96  ----FSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRS 151

Query: 159 K----EYYKYRW 166
           +    +Y   RW
Sbjct: 152 RPPYTDYVSTRW 163

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 50.4 bits (120), Expect = 8e-08
 Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 17/120 (14%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH-YLLLEYTDWGDLKQFLLATRKD 88
           K   A+ + ++E  L  K+ H ++V       + D H Y+++EY D GDL Q        
Sbjct: 37  KSSSAVEDSRKEAVLLAKMKHPNIVAFKE-SFEADGHLYIVMEYCDGGDLMQ-------- 87

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAY-QVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
            K K   GK     L     +   + Q+ LG++HI +KR++H+DI ++N  ++ +  VK+
Sbjct: 88  -KIKLQRGK-----LFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKL 141

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 50.2 bits (120), Expect = 9e-08
 Identities = 37/167 (22%), Positives = 72/167 (43%), Gaps = 25/167 (14%)

Query: 2   SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICR 61
            L   +        Q+ SV++   ++ S   ++L  F     L  +L H H+VK+ G+C 
Sbjct: 15  VLRVQSDLDIVGPGQEVSVVL--KVLGSDHRDSL-AFFETASLMSQLSHKHLVKLYGVCV 71

Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEH 121
             D + ++ EY  +G L  FL   +               ++S    + +A Q+A  L +
Sbjct: 72  -RDENIMVEEYVKFGPLDVFLHREKN--------------NVSLHWKLDVAKQLASALHY 116

Query: 122 ISDKRLIHKDIAARNCLISSD-------LSVKISLSGLSKDTYQKEY 161
           + DK+L+H ++  +N L++           +K+S  G+      +E 
Sbjct: 117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREE 163

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 50.0 bits (119), Expect = 1e-07
 Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 18/158 (11%)

Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +G+   D ++  + +A K L  +   +A  E   E  +   +   +V +++GIC      
Sbjct: 25  KGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQ 84

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++    +++KD+ GS             +    Q+A G+ ++ + R
Sbjct: 85  -LVTQLMPYGCLLDYV----RENKDRIGS----------QDLLNWCVQIAKGMSYLEEVR 129

Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ S   VKI+  GL++  D  + EY+
Sbjct: 130 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 167

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 49.5 bits (118), Expect = 2e-07
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 17/121 (14%)

Query: 35  LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSG 94
           L    REI L  +L H ++V+ +G   D D   + LEY   G +   L        +  G
Sbjct: 50  LDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALL--------NNYG 101

Query: 95  S-GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           +  +  VR+           Q+  GL ++ ++ +IH+DI   N L+ +   +KIS  G+S
Sbjct: 102 AFEETLVRNF--------VRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS 153

Query: 154 K 154
           K
Sbjct: 154 K 154

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 48.7 bits (116), Expect = 3e-07
 Identities = 37/147 (25%), Positives = 62/147 (42%), Gaps = 24/147 (16%)

Query: 44  LFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSL 103
           +  +L H H+V   G+C  GD   ++ EY  +G L  +L              K     +
Sbjct: 52  MMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYL--------------KKNKNLI 97

Query: 104 STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI--------SSDLSVKISLSGLSKD 155
           + S  + +A Q+A  L  + DK L H ++ A+N L+         +   +K+S  G+S  
Sbjct: 98  NISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157

Query: 156 TYQKEYYKYR--WVICSNIAEGRRLNV 180
              KE    R  WV    I   + L++
Sbjct: 158 VLPKEILLERIPWVPPECIENPQNLSL 184

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 48.5 bits (115), Expect = 4e-07
 Identities = 23/60 (38%), Positives = 36/60 (60%)

Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           L+T   ++  YQVA G+E ++ K  +H+D+AARN L++    VKI   GL++D      Y
Sbjct: 234 LTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNY 293

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 48.5 bits (115), Expect = 4e-07
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 14/128 (10%)

Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKS 93
           ++  F  E ++   L H  +VK+  +    +P Y++ E+   G L  FL       K   
Sbjct: 44  SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFL-------KSDE 95

Query: 94  GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           GS +P        + +  + Q+A G+  I  +  IH+D+ A N L+S+ L  KI+  GL+
Sbjct: 96  GSKQP------LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 149

Query: 154 KDTYQKEY 161
           +     EY
Sbjct: 150 RVIEDNEY 157

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 47.3 bits (112), Expect = 1e-06
 Identities = 25/60 (41%), Positives = 35/60 (58%)

Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           LS    V  +YQVA G+E ++ K  +H+D+AARN LI     VKI   GL++D  +   Y
Sbjct: 236 LSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNY 295

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 47.3 bits (113), Expect = 1e-06
 Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 23/145 (15%)

Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIG--ICRDGDPH------YLL 69
             V + K L+H++ D       REI +  KL H +VV +I   + R           Y++
Sbjct: 34  RVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMV 93

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
             Y D  DL   L               P V+ L+ SQ      Q+  G+ ++ +  ++H
Sbjct: 94  TPYMD-HDLSGLL-------------ENPSVK-LTESQIKCYMLQLLEGINYLHENHILH 138

Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +DI A N LI +   +KI+  GL++
Sbjct: 139 RDIKAANILIDNQGILKIADFGLAR 163

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 47.1 bits (112), Expect = 1e-06
 Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 19/142 (13%)

Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            T V +A   +  +D   +     EI L   L H ++V+ +G   +     + +E    G
Sbjct: 31  STQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGG 90

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAY---QVALGLEHISDKRLIHKDIA 133
            L   L +     KD                  T+ +   Q+  GL+++ D +++H+DI 
Sbjct: 91  SLSALLRSKWGPLKDNEQ---------------TIIFYTKQILEGLKYLHDNQIVHRDIK 135

Query: 134 ARNCLISSDLSV-KISLSGLSK 154
             N L+++   V KIS  G SK
Sbjct: 136 GDNVLVNTYSGVVKISDFGTSK 157

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 46.6 bits (110), Expect = 1e-06
 Identities = 33/125 (26%), Positives = 61/125 (48%), Gaps = 13/125 (10%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
           D +A  +  +EIDL  +L+H +V+K +    + +   ++LE  D GDL Q +   +K   
Sbjct: 42  DAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQ-- 99

Query: 91  DKSGSGKPRVRSLSTSQAVTMAY-QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                     + L   + V   + Q+   +EH+  +R++H+DI   N  I++   VK+  
Sbjct: 100 ----------KRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGD 149

Query: 150 SGLSK 154
            GL +
Sbjct: 150 LGLGR 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 15/118 (12%)

Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKP 98
           + EI+    LDH ++V+ +G     +   + LEY   G +   L   R   + +    + 
Sbjct: 56  RSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCL---RTYGRFE----EQ 108

Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            VR  +         QV  GL ++  K ++H+D+ A N L+ +D   KIS  G+SK +
Sbjct: 109 LVRFFTE--------QVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKS 158

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 31/115 (26%), Positives = 63/115 (54%), Gaps = 14/115 (12%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L+H ++V+++ +    +  YL+ E+ D  DLK+++     DS   +G   P 
Sbjct: 47  REISLLKELNHPNIVRLLDVVHSENKLYLVFEFLDL-DLKKYM-----DSSPLTGLDPPL 100

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          YQ+  G+ +    R++H+D+  +N LI  + ++K++  GL++
Sbjct: 101 IKSYL--------YQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 46.2 bits (110), Expect = 2e-06
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 16/139 (11%)

Query: 18  TSVLMAKSLVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           T  +MA   +  + +EA+  +  RE+D+  K +  ++V   G   +     + +EY D G
Sbjct: 25  TGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGG 84

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-LIHKDIAAR 135
            L + L         K   G+   R L       +A  V  GL ++ +K  +IH+D+   
Sbjct: 85  SLDKIL---------KEVQGRIPERILG-----KIAVAVLKGLTYLHEKHKIIHRDVKPS 130

Query: 136 NCLISSDLSVKISLSGLSK 154
           N L++S   +K+   G+S 
Sbjct: 131 NILVNSRGQIKLCDFGVSG 149

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 13/125 (10%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
           D +A  +  +EIDL  +L+H +V+K      + +   ++LE  D GDL + +   +K   
Sbjct: 42  DAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQ-- 99

Query: 91  DKSGSGKPRVRSLSTSQAVTMAY-QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                     + L   + V   + Q+   LEH+  +R++H+DI   N  I++   VK+  
Sbjct: 100 ----------KRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGD 149

Query: 150 SGLSK 154
            GL +
Sbjct: 150 LGLGR 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 46.0 bits (109), Expect = 3e-06
 Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 19/131 (14%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K +  + +D    +  REI++   ++H +VVK   +        +LLE+ D G L+   +
Sbjct: 105 KVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHI 164

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
           A  +   D                   +A Q+  G+ ++  + ++H+DI   N LI+S  
Sbjct: 165 ADEQFLAD-------------------VARQILSGIAYLHRRHIVHRDIKPSNLLINSAK 205

Query: 144 SVKISLSGLSK 154
           +VKI+  G+S+
Sbjct: 206 NVKIADFGVSR 216

Length = 353

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 45.7 bits (109), Expect = 4e-06
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 17/130 (13%)

Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
            V + K  +  ++ E +     EI +     H ++V        GD  ++++EY D G L
Sbjct: 46  EVAIKKMRLRKQNKELI---INEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSL 102

Query: 79  KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
              +                    ++  Q   +  +V  GLE++  + +IH+DI + N L
Sbjct: 103 TDIITQNFVR--------------MNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNIL 148

Query: 139 ISSDLSVKIS 148
           +S D SVK++
Sbjct: 149 LSKDGSVKLA 158

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 25/118 (21%), Positives = 60/118 (50%), Gaps = 13/118 (11%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           E ++E+ +   + H ++V+      +    Y++++Y + GDL + + A R         G
Sbjct: 45  ESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQR---------G 95

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
                     Q +    Q+ L L+H+ D++++H+DI ++N  ++ D ++K+   G+++
Sbjct: 96  VL----FPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIAR 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 45.6 bits (108), Expect = 4e-06
 Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 18/122 (14%)

Query: 40  REIDLFCKLDHA-HVVKMIGI----CRDGDPH-YLLLEYTDWGDLKQFLLATRKDSKDKS 93
           REI L   L  + ++V+++ +     ++G P  YL+ EY D  DLK+F+ +  +      
Sbjct: 49  REISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLD-SDLKKFMDSNGR------ 101

Query: 94  GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV-KISLSGL 152
           G G+P    L      +  YQ+  G+ H     ++H+D+  +N L+     + KI+  GL
Sbjct: 102 GPGRP----LPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGL 157

Query: 153 SK 154
            +
Sbjct: 158 GR 159

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 45.4 bits (108), Expect = 4e-06
 Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 29/161 (18%)

Query: 17  DTSVLMA-KSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
            T  ++A K    S+DDE + +   RE+ +  +L H ++V +    R     YL+ EY +
Sbjct: 24  ATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVE 83

Query: 75  WGDLKQFLLATRKDSKDKSGSGKPR--VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
              L+           + S  G P   VRS          +Q+   + +     +IH+DI
Sbjct: 84  RTLLELL---------EASPGGLPPDAVRSYI--------WQLLQAIAYCHSHNIIHRDI 126

Query: 133 AARNCLISSDLSVKI-------SLSGLSKDTYQKEYYKYRW 166
              N L+S    +K+       +L      +   +Y   RW
Sbjct: 127 KPENILVSESGVLKLCDFGFARALRA-RPASPLTDYVATRW 166

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 15/116 (12%)

Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKP 98
           + EI L   L H  +V+  G  RD +   + +EY   G +K  L A              
Sbjct: 52  ECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKA-------------- 97

Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              +L+ +       Q+  G+E++    ++H+DI   N L  S  +VK+   G SK
Sbjct: 98  -YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASK 152

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 5e-06
 Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 14/136 (10%)

Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD 77
           T  L+A  ++  +  +     ++EI +  +  H ++V   G     D  ++++EY   G 
Sbjct: 27  TGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGS 86

Query: 78  LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC 137
           L+     TR                LS  Q   +  +   GL ++ +   IH+DI   N 
Sbjct: 87  LQDIYQVTR--------------GPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANI 132

Query: 138 LISSDLSVKISLSGLS 153
           L++ D  VK++  G+S
Sbjct: 133 LLTEDGDVKLADFGVS 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 45.0 bits (106), Expect = 6e-06
 Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 21/154 (13%)

Query: 16  QDTSVLMAKSLVHSKD---DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
           +DT  + A  ++   D    E +   + E D+  + D A VVKM    +D    YL++E+
Sbjct: 23  KDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEF 82

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
              GD+   L+  +KD             +LS         +  L ++ I     IH+DI
Sbjct: 83  LPGGDMMTLLM--KKD-------------TLSEEATQFYIAETVLAIDAIHQLGFIHRDI 127

Query: 133 AARNCLISSDLSVKISLSGLS---KDTYQKEYYK 163
              N L+ +   VK+S  GL    K  ++ E+Y+
Sbjct: 128 KPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYR 161

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 45.0 bits (106), Expect = 6e-06
 Identities = 32/144 (22%), Positives = 62/144 (43%), Gaps = 16/144 (11%)

Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
            K  D +   V+  K +   + ++ + + ++EI +  + D  +V K  G    G   +++
Sbjct: 21  FKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII 80

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           +EY   G     L                R       Q  TM  ++  GL+++  ++ IH
Sbjct: 81  MEYLGGGSALDLL----------------RAGPFDEFQIATMLKEILKGLDYLHSEKKIH 124

Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI A N L+S    VK++  G++
Sbjct: 125 RDIKAANVLLSEQGDVKLADFGVA 148

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 44.9 bits (106), Expect = 8e-06
 Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 11/87 (12%)

Query: 68  LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL 127
           L+L+Y + GDL+Q       + K ++ + +         +A  +  QV L + H+  K +
Sbjct: 116 LVLDYANAGDLRQ-------EIKSRAKTNRT----FREHEAGLLFIQVLLAVHHVHSKHM 164

Query: 128 IHKDIAARNCLISSDLSVKISLSGLSK 154
           IH+DI + N L+ S+  VK+   G SK
Sbjct: 165 IHRDIKSANILLCSNGLVKLGDFGFSK 191

Length = 496

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 44.3 bits (105), Expect = 8e-06
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 22/128 (17%)

Query: 24  KSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD---WGDLK 79
           K  + S+DD+ + +   REI +  +L H ++V +I + R     YL+ E+ D     DL+
Sbjct: 32  KKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLE 91

Query: 80  QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
           ++           +G  + RVR           +Q+  G+E      +IH+DI   N L+
Sbjct: 92  KY----------PNGLDESRVRK--------YLFQILRGIEFCHSHNIIHRDIKPENILV 133

Query: 140 SSDLSVKI 147
           S    VK+
Sbjct: 134 SQSGVVKL 141

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 44.1 bits (104), Expect = 9e-06
 Identities = 35/128 (27%), Positives = 64/128 (50%), Gaps = 16/128 (12%)

Query: 13  SDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
           ++ ++  V++ K L  S  D AL  F     L  ++ H H+  + G+C  G  + ++ E+
Sbjct: 40  NNGRELRVVL-KVLDPSHRDIAL-AFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEF 97

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
            + G L   L   RK+        K RV     +  +T+A Q+A  L ++ DK L+H ++
Sbjct: 98  VEHGPLDVCL---RKE--------KGRVP---VAWKITVAQQLASALSYLEDKNLVHGNV 143

Query: 133 AARNCLIS 140
            A+N L++
Sbjct: 144 CAKNILLA 151

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 44.1 bits (105), Expect = 1e-05
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 21/113 (18%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH-----YLLLEYTDWGDLKQFLLATRKDSKDKSG 94
           REI L   L H +++ ++ I R   P      Y++ E  +  DL + +         KS 
Sbjct: 48  REIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-TDLHKVI---------KSP 97

Query: 95  SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                 + L+        YQ+  GL+++    +IH+D+   N L++S+  +KI
Sbjct: 98  ------QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKI 144

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 19/118 (16%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L H +++ ++ +        L+ E+ +  DL++ +       KDKS      
Sbjct: 51  REIKLLQELKHPNIIGLLDVFGHKSNINLVFEFMET-DLEKVI-------KDKS------ 96

Query: 100 VRSLSTSQAVTMAY--QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
              +  + A   +Y      GLE++    ++H+D+   N LI+SD  +K++  GL++ 
Sbjct: 97  ---IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARS 151

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 43.4 bits (102), Expect = 2e-05
 Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 15/115 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           RE+ L   L HA++V +  I        L+ EY D  DLKQ++        D  G+    
Sbjct: 53  REVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-KDLKQYM--------DDCGN---- 99

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              +S        YQ+  GL +   ++++H+D+  +N LI+    +K++  GL++
Sbjct: 100 --IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 42.9 bits (102), Expect = 3e-05
 Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 15/107 (14%)

Query: 48  LDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQ 107
           + H  +V + G  +D    YL++EY   G+L   L   RK                    
Sbjct: 58  IRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHL---RK------------SGRFPEPV 102

Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           A   A QV L LE++    ++++D+   N L+ SD  +KI+  G +K
Sbjct: 103 ARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAK 149

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 21/142 (14%)

Query: 17  DTSVLMA-KSL-VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           DT  LMA K + +   D + + E   E+ +   L H ++VK  G+    +  Y+ +EY  
Sbjct: 23  DTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCS 82

Query: 75  WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVAL--GLEHISDKRLIHKDI 132
            G L++ L   R                    + V   Y + L  GL ++    ++H+DI
Sbjct: 83  GGTLEELLEHGRILD-----------------EHVIRVYTLQLLEGLAYLHSHGIVHRDI 125

Query: 133 AARNCLISSDLSVKISLSGLSK 154
              N  +  +  +K+   G + 
Sbjct: 126 KPANIFLDHNGVIKLGDFGCAV 147

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.0 bits (102), Expect = 3e-05
 Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 18/121 (14%)

Query: 26  LVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLAT 85
           L  ++D+  + + ++EI    +    ++ K  G    G   ++++EY   G     L   
Sbjct: 36  LEEAEDE--IEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLL--- 90

Query: 86  RKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV 145
                 K G        L  +    +  +V LGLE++ ++  IH+DI A N L+S +  V
Sbjct: 91  ------KPGK-------LDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDV 137

Query: 146 K 146
           K
Sbjct: 138 K 138

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 42.6 bits (100), Expect = 3e-05
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 13/144 (9%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           KA   +   VL    +     +E +    +E  L  KLDH  +VK      + D   ++ 
Sbjct: 23  KAVAEERLKVLKEIPVGELNPNETVQA-NQEAQLLSKLDHPAIVKFHASFLERDAFCIIT 81

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           EY +  DL             K    K   ++LS +Q      Q+ LG+ ++  +R++H+
Sbjct: 82  EYCEGRDLD-----------CKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHR 130

Query: 131 DIAARNCLISSDLSVKISLSGLSK 154
           D+ A+N  + ++L +KI   G+S+
Sbjct: 131 DLKAKNIFLKNNL-LKIGDFGVSR 153

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 42.8 bits (101), Expect = 3e-05
 Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 13/135 (9%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
           V M K  + S+++       REI L  +L H ++V +  +       YL+ E+    DLK
Sbjct: 28  VAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLSM-DLK 86

Query: 80  QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
           ++L +  K             + +      +  YQ+  G+     +R++H+D+  +N LI
Sbjct: 87  KYLDSLPKG------------QYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLI 134

Query: 140 SSDLSVKISLSGLSK 154
            +   +K++  GL++
Sbjct: 135 DNKGVIKLADFGLAR 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 42.5 bits (100), Expect = 4e-05
 Identities = 29/115 (25%), Positives = 58/115 (50%), Gaps = 13/115 (11%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L H ++V++  +    +   L+ EY D  DLK+++     D+    G+  P 
Sbjct: 47  REISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KDLKKYM-----DTHGVRGALDP- 99

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
                 +   +  YQ+  G+    + R++H+D+  +N LI+    +K++  GL++
Sbjct: 100 ------NTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLAR 148

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 42.5 bits (100), Expect = 4e-05
 Identities = 41/148 (27%), Positives = 61/148 (41%), Gaps = 26/148 (17%)

Query: 24  KSLVHS---KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ 80
           K+L+ S   K D+  H  K E D+  + D   VV +    +D    YL++E+   GDL  
Sbjct: 32  KTLLKSEMFKKDQLAH-VKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMT 90

Query: 81  FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAY--QVALGLEHISDKRLIHKDIAARNCL 138
            L+     S+D                 VT  Y  +  L +E +     IH+DI   N L
Sbjct: 91  MLIKYDTFSED-----------------VTRFYMAECVLAIEAVHKLGFIHRDIKPDNIL 133

Query: 139 ISSDLSVKISLSGLSK---DTYQKEYYK 163
           I     +K+S  GLS      +   YY+
Sbjct: 134 IDRGGHIKLSDFGLSTGFHKQHDSAYYQ 161

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 42.3 bits (99), Expect = 5e-05
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 21/154 (13%)

Query: 16  QDTSVLMAKSLVHSKD---DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
           +DT  + A  ++   D    E +   + E D+  + D   VVKM    +D    YL++E+
Sbjct: 23  KDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEF 82

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
              GD+   L+  +KD             +L+  +      +  L ++ I     IH+DI
Sbjct: 83  LPGGDMMTLLM--KKD-------------TLTEEETQFYIAETVLAIDSIHQLGFIHRDI 127

Query: 133 AARNCLISSDLSVKISLSGLS---KDTYQKEYYK 163
              N L+ S   VK+S  GL    K  ++ E+Y+
Sbjct: 128 KPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYR 161

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 41.9 bits (98), Expect = 6e-05
 Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 23/154 (14%)

Query: 17  DTSVLMAKSLVHSKD----DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
           DT  L A   +  KD    ++  H  K E D+  + D+  VVK+    +D D  Y +++Y
Sbjct: 24  DTHALYAMKTLRKKDVLNRNQVAH-VKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 82

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
              GD+   L+               R+       A     ++ L +E +     IH+DI
Sbjct: 83  IPGGDMMSLLI---------------RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDI 127

Query: 133 AARNCLISSDLSVKISLSGLSKD---TYQKEYYK 163
              N LI  D  +K++  GL      T+  +YY+
Sbjct: 128 KPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQ 161

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
           K R R L   +  +  YQ+   L+H+    + H+DI   N LI  D+ +K++  G  +  
Sbjct: 91  KGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKDDI-LKLADFGSCRGI 149

Query: 157 YQK----EYYKYRW 166
           Y K    EY   RW
Sbjct: 150 YSKPPYTEYISTRW 163

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 41.5 bits (97), Expect = 1e-04
 Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 15/115 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           RE+ L   L HA++V +  I        L+ EY D  DLKQ+L        D  G+    
Sbjct: 52  REVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQYL--------DNCGN---- 98

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              +S        +Q+  GL +   ++++H+D+  +N LI+    +K++  GL++
Sbjct: 99  --LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 33/145 (22%), Positives = 65/145 (44%), Gaps = 16/145 (11%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           KA + +   ++  K +    DDE +     REI L  +L H ++V++  +        L+
Sbjct: 18  KAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLV 77

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY D  DLK++           S +G          ++    +Q+  GL       ++H
Sbjct: 78  FEYCD-QDLKKYF---------DSCNGDI---DPEIVKSFM--FQLLKGLAFCHSHNVLH 122

Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+  +N LI+ +  +K++  GL++
Sbjct: 123 RDLKPQNLLINKNGELKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 41.0 bits (96), Expect = 1e-04
 Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 16/146 (10%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           KA D      +  K +   ++DE +     REI L  ++ H ++V++  +       YL+
Sbjct: 20  KARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY D  DLK+ + ++   +K+      PR+         T  YQ+  G+ +    R++H
Sbjct: 80  FEYLDL-DLKKHMDSSPDFAKN------PRLIK-------TYLYQILRGIAYCHSHRVLH 125

Query: 130 KDIAARNCLIS-SDLSVKISLSGLSK 154
           +D+  +N LI     ++K++  GL++
Sbjct: 126 RDLKPQNLLIDRRTNALKLADFGLAR 151

Length = 294

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 40.8 bits (96), Expect = 1e-04
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 21/127 (16%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           RE  L   L HA++V +  I        L+ EY D  DLKQ++        D  G G   
Sbjct: 52  REASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDLKQYM--------DDCGGG--- 99

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK----- 154
              LS        +Q+  GL +   +R++H+D+  +N LIS    +K++  GL++     
Sbjct: 100 ---LSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156

Query: 155 -DTYQKE 160
             TY  E
Sbjct: 157 SKTYSNE 163

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 41.3 bits (97), Expect = 1e-04
 Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 7/111 (6%)

Query: 31  DDEALHE-FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR-KD 88
           ++  L + F RE  +   L H  +V +  IC DGDP Y  + Y +   LK  L +   K+
Sbjct: 41  ENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKE 100

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
           S  K  + K  V +      +++ +++   +E++  K ++H+D+   N L+
Sbjct: 101 SLSKELAEKTSVGAF-----LSIFHKICATIEYVHSKGVLHRDLKPDNILL 146

Length = 932

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 15/115 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           RE+ L   L HA++V +  I        L+ EY D  DLKQ+L        D  G+    
Sbjct: 53  REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYL--------DDCGN---- 99

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
             S++        +Q+  GL +   ++++H+D+  +N LI+    +K++  GL++
Sbjct: 100 --SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 19/114 (16%), Positives = 44/114 (38%), Gaps = 13/114 (11%)

Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRV 100
           EI +   L H +++       D +   + +EY + G L   ++  +              
Sbjct: 49  EIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKG------------- 95

Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           +       +   +Q+   + +I    ++H+DI   N  ++    +K+   G+SK
Sbjct: 96  QLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISK 149

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 27/115 (23%), Positives = 59/115 (51%), Gaps = 13/115 (11%)

Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRV 100
           EI +   ++H +++       DG+   +++EY  +GDL + +            S + + 
Sbjct: 49  EIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAI------------SKRKKK 96

Query: 101 RSLSTSQAV-TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           R L   Q +  +  Q+  GL+ + +++++H+D+ + N L+ ++  VKI   G+SK
Sbjct: 97  RKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISK 151

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 40.0 bits (94), Expect = 3e-04
 Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 30/139 (21%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH-------YLLLEYTDWGDLKQFLLATRKDSKDK 92
           REI L   LDH +V+ +  I     PH       Y++ E  D  DL Q + +++      
Sbjct: 53  REIKLLRHLDHENVIAIKDIMPP--PHREAFNDVYIVYELMD-TDLHQIIRSSQ------ 103

Query: 93  SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL 152
                    +LS        YQ+  GL++I    ++H+D+   N L++++  +KI   GL
Sbjct: 104 ---------TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGL 154

Query: 153 SKDTYQK-----EYYKYRW 166
           ++ T +K     EY   RW
Sbjct: 155 ARTTSEKGDFMTEYVVTRW 173

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 37/150 (24%), Positives = 68/150 (45%), Gaps = 21/150 (14%)

Query: 11  KASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPH-- 66
           K ++ +D S+   K L    D DE   E + E ++   L +H +VVK  G+    D    
Sbjct: 40  KVTNKKDGSLAAVKILDPISDVDE---EIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96

Query: 67  ---YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS 123
              +L+LE  + G + + +                  + L  +    + Y   LGL+H+ 
Sbjct: 97  GQLWLVLELCNGGSVTELVKGLLI-----------CGQRLDEAMISYILYGALLGLQHLH 145

Query: 124 DKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           + R+IH+D+   N L++++  VK+   G+S
Sbjct: 146 NNRIIHRDVKGNNILLTTEGGVKLVDFGVS 175

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 40.0 bits (93), Expect = 3e-04
 Identities = 37/154 (24%), Positives = 63/154 (40%), Gaps = 23/154 (14%)

Query: 17  DTSVLMAKSLVHSKD----DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
           DT  L A   +  KD    ++  H  K E D+  + D+  VV++    +D D  Y +++Y
Sbjct: 24  DTKALYAMKTLRKKDVLLRNQVAH-VKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDY 82

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
              GD+   L+               R+       A     ++   +E +     IH+DI
Sbjct: 83  IPGGDMMSLLI---------------RMGIFPEDLARFYIAELTCAVESVHKMGFIHRDI 127

Query: 133 AARNCLISSDLSVKISLSGLSKD---TYQKEYYK 163
              N LI  D  +K++  GL      T+  +YY+
Sbjct: 128 KPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQ 161

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 17/51 (33%), Positives = 30/51 (58%)

Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
               +A     Q+  GLEH+  +R+I++D+   N L+ +D +V+IS  GL+
Sbjct: 94  FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLA 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 27/114 (23%), Positives = 53/114 (46%), Gaps = 20/114 (17%)

Query: 50  HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAV 109
           H ++V+M      GD  ++++E+ + G L   +  TR                ++  Q  
Sbjct: 75  HPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTHTR----------------MNEEQIA 118

Query: 110 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG----LSKDTYQK 159
           T+   V   L  +  + +IH+DI + + L++SD  VK+S  G    +SK+  ++
Sbjct: 119 TVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR 172

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 22/124 (17%)

Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPH----YLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           E+++  +L H ++V+     R  D      Y+++EY + GDL Q +   +K+ K      
Sbjct: 49  EVNILRELKHPNIVRYYD--RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERK------ 100

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHI-----SDKRLIHKDIAARNCLISSDLSVKISLSG 151
                 +       +  Q+ L L            ++H+D+   N  + ++ +VK+   G
Sbjct: 101 -----YIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG 155

Query: 152 LSKD 155
           L+K 
Sbjct: 156 LAKI 159

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 39.3 bits (92), Expect = 5e-04
 Identities = 35/157 (22%), Positives = 63/157 (40%), Gaps = 22/157 (14%)

Query: 17  DTSVLMA-KSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           +T  ++A K  V S+DD  + +   REI +  +L H ++V +I + R     +L+ EY D
Sbjct: 24  ETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCD 83

Query: 75  WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
              L +          +K+  G P            + +Q    +        IH+D+  
Sbjct: 84  HTVLNEL---------EKNPRGVPEH------LIKKIIWQTLQAVNFCHKHNCIHRDVKP 128

Query: 135 RNCLISSDLSVKISLSGLSK-----DTYQKEYYKYRW 166
            N LI+    +K+   G ++          +Y   RW
Sbjct: 129 ENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRW 165

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 39.2 bits (91), Expect = 5e-04
 Identities = 33/145 (22%), Positives = 64/145 (44%), Gaps = 14/145 (9%)

Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
            + SDP++  V  AK ++ + + +A +  + E+      DH  +VK     +  D   L+
Sbjct: 87  TRGSDPKEKVV--AKFVMLNDERQAAYA-RSELHCLAACDHFGIVKHFDDFKSDDKLLLI 143

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           +EY   GDL        K  K +     P        +   + YQ+ L L+ +  ++++H
Sbjct: 144 MEYGSGGDLN-------KQIKQRLKEHLP----FQEYEVGLLFYQIVLALDEVHSRKMMH 192

Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+ + N  +     +K+   G SK
Sbjct: 193 RDLKSANIFLMPTGIIKLGDFGFSK 217

Length = 478

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 39.2 bits (92), Expect = 6e-04
 Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 15/119 (12%)

Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGS 95
            +   E D+  +    +VVK+    +     YL++EY   GDL   L        +  GS
Sbjct: 38  DQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLL--------ENVGS 89

Query: 96  GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
                  L    A     ++ L LE++    +IH+D+   N LI S+  +K++  GLSK
Sbjct: 90  -------LDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSK 141

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 39.1 bits (91), Expect = 6e-04
 Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 14/140 (10%)

Query: 16  QDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           + T V MA K +    D+   ++   E+D+  K    ++V   G        Y+ +EY D
Sbjct: 23  RPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMD 82

Query: 75  WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIA 133
            G L            DK  +G      +       + Y V  GL+ + ++  +IH+D+ 
Sbjct: 83  AGSL------------DKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVK 130

Query: 134 ARNCLISSDLSVKISLSGLS 153
             N L++ +  VK+   G+S
Sbjct: 131 PTNVLVNGNGQVKLCDFGVS 150

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 39.2 bits (91), Expect = 6e-04
 Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 21/131 (16%)

Query: 33  EALHEFKREID-----LFCKLDHAHVVKMIGI-----CRDGDPHYLLLEYTDWGDLKQFL 82
           + +H+   EI+     L    DH +VVK  G+      ++GD  +L+LE  + G +   +
Sbjct: 52  DPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLV 111

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
               K           R   +       + ++  +GL+H+   + IH+D+   N L++++
Sbjct: 112 KGFLK-----------RGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTE 160

Query: 143 LSVKISLSGLS 153
             VK+   G+S
Sbjct: 161 GGVKLVDFGVS 171

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 38.8 bits (90), Expect = 6e-04
 Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 14/96 (14%)

Query: 47  KLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTS 106
           ++ H H+V + G+C     + ++ E+ ++G L  F+   RK               L+T 
Sbjct: 60  QVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFM--HRKSD------------VLTTP 105

Query: 107 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
               +A Q+A  L ++ DK L+H ++  +N L++ +
Sbjct: 106 WKFKVAKQLASALSYLEDKDLVHGNVCTKNILLARE 141

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 12/130 (9%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K +   K   ++ E ++E+    + +H +VVK       GD  +L++ Y   G L    L
Sbjct: 32  KRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSL----L 87

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
              K S  + G        L  +   T+  +V  GLE++     IH+DI A N L+  D 
Sbjct: 88  DIMKSSYPRGG--------LDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG 139

Query: 144 SVKISLSGLS 153
           SVKI+  G+S
Sbjct: 140 SVKIADFGVS 149

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 38.7 bits (90), Expect = 9e-04
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 15/113 (13%)

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
           YL++EY   GD+K  L       ++                AV    +VAL L+++    
Sbjct: 80  YLVMEYLIGGDVKSLLHIYGYFDEE---------------MAVKYISEVALALDYLHRHG 124

Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVICSNIAEGRRLN 179
           +IH+D+   N LIS++  +K++  GLSK T  +E      +   ++A+ +   
Sbjct: 125 IIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDY 177

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 9e-04
 Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 20/145 (13%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + KS +  K+  A H  + E D+  + D+  VVK+    +D +  YL++EY   GD+   
Sbjct: 34  LRKSEMLEKEQVA-H-VRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTL 91

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L+  +KD+              +  +      +  L ++ I     IH+DI   N L+ +
Sbjct: 92  LM--KKDT-------------FTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA 136

Query: 142 DLSVKISLSGLS---KDTYQKEYYK 163
              +K+S  GL    K +++ E+Y+
Sbjct: 137 KGHIKLSDFGLCTGLKKSHRTEFYR 161

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)

Query: 7   ARGLKASDP-QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGD 64
           A GL  S P    +V M K    S + +AL     E+ +   L  H ++V ++G C    
Sbjct: 58  AYGLSRSQPVMKVAVKMLKPTARSSEKQALMS---ELKIMTHLGPHLNIVNLLGACTKSG 114

Query: 65  PHYLLLEYTDWGDLKQFLLATRKD 88
           P Y++ EY  +GDL  +L   R +
Sbjct: 115 PIYIITEYCFYGDLVNYLHKNRDN 138

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 5/78 (6%)

Query: 7   ARGLKASDPQ-DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGD 64
           A GL  S      +V M KS   S + +AL     E+ +   L  H ++V ++G C  G 
Sbjct: 58  AHGLSHSQSTMKVAVKMLKSTARSSEKQALMS---ELKIMSHLGPHLNIVNLLGACTKGG 114

Query: 65  PHYLLLEYTDWGDLKQFL 82
           P Y++ EY  +GDL  +L
Sbjct: 115 PIYIITEYCRYGDLVDYL 132

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 38.5 bits (89), Expect = 0.001
 Identities = 31/143 (21%), Positives = 64/143 (44%), Gaps = 16/143 (11%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           K  D +   V+  K +   + ++ + + ++EI +  + D  ++ +  G    G   ++++
Sbjct: 22  KGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM 81

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           EY   G     L              KP    L  +   T+  ++  GL+++  +R IH+
Sbjct: 82  EYLGGGSALDLL--------------KPG--PLEETYIATILREILKGLDYLHSERKIHR 125

Query: 131 DIAARNCLISSDLSVKISLSGLS 153
           DI A N L+S    VK++  G++
Sbjct: 126 DIKAANVLLSEQGDVKLADFGVA 148

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 28/150 (18%), Positives = 65/150 (43%), Gaps = 23/150 (15%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
           V+    ++  K ++ +H  KR   +  ++ H  ++++     D    Y+L+EY   G+L 
Sbjct: 33  VMAIPEVIRLKQEQHVHNEKR---VLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELF 89

Query: 80  QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
            +L  + +                S S  +  A ++   LE++  K ++++D+   N L+
Sbjct: 90  SYLRNSGR---------------FSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILL 134

Query: 140 SSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
             +  +K++  G +K    +      W +C
Sbjct: 135 DKEGHIKLTDFGFAKKLRDRT-----WTLC 159

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 31/144 (21%), Positives = 64/144 (44%), Gaps = 16/144 (11%)

Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
            K  D +   V+  K +   + ++ + + ++EI +  + D  +V K  G        +++
Sbjct: 21  FKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 80

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           +EY   G     L              +P    L  +Q  T+  ++  GL+++  ++ IH
Sbjct: 81  MEYLGGGSALDLL--------------EPG--PLDETQIATILREILKGLDYLHSEKKIH 124

Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI A N L+S    VK++  G++
Sbjct: 125 RDIKAANVLLSEHGEVKLADFGVA 148

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 38.2 bits (89), Expect = 0.001
 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 15/107 (14%)

Query: 53  VVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMA 112
           V K+    +  D  YL++EY + GD    +                 +  L    A    
Sbjct: 59  VAKLYYSFQSKDYLYLVMEYLNGGDCASLI---------------KTLGGLPEDWAKQYI 103

Query: 113 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK 159
            +V LG+E +  + +IH+DI   N LI     +K++  GLS++  + 
Sbjct: 104 AEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLEN 150

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 16/55 (29%), Positives = 32/55 (58%)

Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                ++A+  A Q+  GLEH+  +R++++D+   N L+    +V+IS  GL+ +
Sbjct: 90  PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVE 144

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 37.7 bits (88), Expect = 0.002
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 23/129 (17%)

Query: 40  REIDLFCKLDHAHVVKMIGICR--------DGDPHYLLLEYTDWGDLKQFLLATRKDSKD 91
           REI +   L H +VV +I ICR             YL+ E+ +  DL   L         
Sbjct: 60  REIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLL--------- 109

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
                   V+  + S+   +   +  GL +I   +++H+D+ A N LI+ D  +K++  G
Sbjct: 110 ----SNKNVK-FTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFG 164

Query: 152 LSKDTYQKE 160
           L++     +
Sbjct: 165 LARAFSLSK 173

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 37.6 bits (87), Expect = 0.002
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 23/153 (15%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALH-EFKREIDLFCKL---DHAHVVKMIGICRDGDPH 66
           KA DP     +  KS+    +++ L     RE+ L  +L   DH ++V+++ +C      
Sbjct: 18  KARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD 77

Query: 67  Y-----LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEH 121
                 L+ E+ D  DL+ +L     D     G     ++ L          Q   GL+ 
Sbjct: 78  RETKVTLVFEHVD-QDLRTYL-----DKVPPPGLPAETIKDLMR--------QFLRGLDF 123

Query: 122 ISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           +    ++H+D+   N L++S   VK++  GL++
Sbjct: 124 LHANCIVHRDLKPENILVTSGGQVKLADFGLAR 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 31/141 (21%), Positives = 59/141 (41%), Gaps = 18/141 (12%)

Query: 18  TSVLMAKSLVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPH----YLLLEY 72
           T ++ A   + +  +  L  +  RE+++       ++VK  G   D         + +EY
Sbjct: 25  TGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD--ESSSSIGIAMEY 82

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
            + G L     +  K  K + G    +V          +A  V  GL ++  +++IH+DI
Sbjct: 83  CEGGSLD----SIYKKVKKRGGRIGEKV-------LGKIAESVLKGLSYLHSRKIIHRDI 131

Query: 133 AARNCLISSDLSVKISLSGLS 153
              N L++    VK+   G+S
Sbjct: 132 KPSNILLTRKGQVKLCDFGVS 152

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 37.8 bits (88), Expect = 0.002
 Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 32/140 (22%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKM--------------IGICRDGDPHYLLLEYTDW 75
            D +++    REI +  +LDH ++VK+              +G   + +  Y++ EY + 
Sbjct: 41  TDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYME- 99

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
            DL   L                    LS   A    YQ+  GL++I    ++H+D+   
Sbjct: 100 TDLANVLEQGP----------------LSEEHARLFMYQLLRGLKYIHSANVLHRDLKPA 143

Query: 136 NCLISS-DLSVKISLSGLSK 154
           N  I++ DL +KI   GL++
Sbjct: 144 NVFINTEDLVLKIGDFGLAR 163

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 9/63 (14%)

Query: 113 YQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK---------DTYQKEYYK 163
           YQ+  GL++I    ++H+D+   N L+++D  +KI   GL++           +  EY  
Sbjct: 112 YQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVA 171

Query: 164 YRW 166
            RW
Sbjct: 172 TRW 174

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 37.4 bits (87), Expect = 0.002
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 25/125 (20%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDP----------HYLLLEYTDWGDLKQFLLATRKDS 89
           REI +  +L+H ++V +  I  D              YL+ EY D  DL   L       
Sbjct: 55  REIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMD-HDLMGLL------- 106

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
             +SG     +   S     +   Q+  GL +   K  +H+DI   N L+++   +K++ 
Sbjct: 107 --ESG-----LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLAD 159

Query: 150 SGLSK 154
            GL++
Sbjct: 160 FGLAR 164

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 37.0 bits (85), Expect = 0.003
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 15/115 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           RE  L   L HA++V +  I    +   L+ EY    DL Q++        DK   G   
Sbjct: 52  REASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQYM--------DKHPGG--- 99

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              L         +Q+  GL +I  + ++H+D+  +N LIS    +K++  GL++
Sbjct: 100 ---LHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 37.4 bits (86), Expect = 0.003
 Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 14/133 (10%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           + + EI    +L+H +++K+  I R     Y++ +  D+ DL  F+     D KD+    
Sbjct: 209 QLENEILALGRLNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDR---- 263

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++     Q   +  Q+   +E+I DK+LIH+DI   N  ++ D  + +   G +   
Sbjct: 264 -PLLK-----QTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFG-TAMP 316

Query: 157 YQKEY--YKYRWV 167
           ++KE   + Y WV
Sbjct: 317 FEKEREAFDYGWV 329

Length = 501

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 36.7 bits (86), Expect = 0.003
 Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 17/134 (12%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + K  +  + +        E ++  +++H  +VK+    +  +  YL+LEY   G+L   
Sbjct: 26  LKKKKIIKRKEVEH--TLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSH 83

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L                +    S  +A   A ++ L LE++    +I++D+   N L+ +
Sbjct: 84  LS---------------KEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDA 128

Query: 142 DLSVKISLSGLSKD 155
           D  +K++  GL+K+
Sbjct: 129 DGHIKLTDFGLAKE 142

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 36.7 bits (85), Expect = 0.004
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           EI    KL H ++VK+IG+CR     YL+ EY +  +L + L 
Sbjct: 733 EIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR 775

Length = 968

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	183
KOG0595|consensus	429		100.0
KOG0615|consensus	475		100.0
KOG0593|consensus	396		100.0
KOG0581|consensus	364		100.0
KOG0575|consensus	592		100.0
KOG0600|consensus	560		100.0
KOG0659|consensus	318		100.0
KOG0591|consensus	375		100.0
KOG0611|consensus	668		100.0
KOG0598|consensus	357		100.0
KOG0616|consensus	355		100.0
KOG0661|consensus	538		100.0
KOG0583|consensus	370		100.0
KOG0588|consensus	786		100.0
KOG0592|consensus	604		100.0
KOG0594|consensus	323		100.0
KOG0663|consensus	419		100.0
KOG0192|consensus	362		100.0
KOG0597|consensus	808		100.0
KOG0578|consensus	550		100.0
KOG0198|consensus	313		100.0
KOG0582|consensus	516		100.0
KOG1026|consensus	774		100.0
KOG0605|consensus	550		99.98
KOG0589|consensus	426		99.98
KOG0586|consensus	596		99.97
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.97
KOG4717|consensus	864		99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
KOG0660|consensus	359		99.97
KOG1187|consensus	361		99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
KOG0585|consensus	576		99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
KOG0658|consensus	364		99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
KOG0599|consensus	411		99.97
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.97
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
KOG0197|consensus	468		99.97
KOG0667|consensus	586		99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
KOG0032|consensus	382		99.97
KOG0694|consensus	694		99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
KOG0577|consensus	948		99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.97
KOG0033|consensus	355		99.97
KOG0580|consensus	281		99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.96
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.96
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.96
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.96
KOG4236|consensus	888		99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.96
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.96
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.96
KOG4250|consensus	732		99.96
PTZ00267	478	NIMA-related protein kinase; Provisional	99.96
KOG0201|consensus	467		99.96
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.96
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.96
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.96
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.96
KOG0194|consensus	474		99.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.96
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.96
PHA03212	391	serine/threonine kinase US3; Provisional	99.96
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.96
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.96
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.96
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.96
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
KOG1095|consensus	1025		99.96
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.96
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.96
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.96
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.96
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.96
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.96
KOG0584|consensus	632		99.96
KOG0579|consensus	1187		99.96
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
KOG0607|consensus	463		99.96
PTZ00283	496	serine/threonine protein kinase; Provisional	99.96
KOG0666|consensus	438		99.96
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.96
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.96
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.95
KOG0574|consensus	502		99.95
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.95
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.95
KOG0662|consensus	292		99.95
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.95
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.95
PHA03211	461	serine/threonine kinase US3; Provisional	99.95
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.95
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.95
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.95
PHA03209	357	serine/threonine kinase US3; Provisional	99.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.95
KOG1094|consensus	807		99.95
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.95
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.95
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.95
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.95
KOG1989|consensus	738		99.95
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.95
KOG1152|consensus	772		99.95
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.95
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.95
KOG0604|consensus	400		99.95
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.95
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.95
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.95
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.95
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.95
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.95
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.95
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.95
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.95
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.95
PHA02988	283	hypothetical protein; Provisional	99.95
KOG0986|consensus	591		99.95
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.95
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.95
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.95
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.95
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.95
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.95
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.95
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.95
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.95
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.95
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.95
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.95
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.95
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.95
KOG4645|consensus	1509		99.95
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.95
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.95
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.95
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.95
PTZ00036	440	glycogen synthase kinase; Provisional	99.95
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.95
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.95
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.95
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.95
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.95
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.95
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.94
KOG0690|consensus	516		99.94
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.94
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.94
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.94
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.94
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.94
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.94
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.94
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.94
KOG0193|consensus	678		99.94
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.94
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.94
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.94
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.94
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.94
PHA03207	392	serine/threonine kinase US3; Provisional	99.94
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.94
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.94
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.94
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.94
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.94
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.94
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.94
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.94
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.94
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.94
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.94
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.94
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.94
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.94
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.94
KOG0610|consensus	459		99.94
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.94
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.94
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.94
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.94
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.94
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.94
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.94
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.94
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.94
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.94
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.94
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.94
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.94
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.94
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.94
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.94
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.94
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.94
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.94
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.94
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.94
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.94
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.94
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.94
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.94
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.94
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.94
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.94
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.94
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.94
KOG0612|consensus	1317		99.94
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.94
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.94
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.94
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.94
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.94
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.94
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.94
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.94
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.94
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.94
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.94
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.94
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.94
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.94
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.94
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.94
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.94
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.94
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.94
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.94
KOG0608|consensus	1034		99.94
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.94
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.94
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.94
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.93
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.93
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.93
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.93
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.93
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.93
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.93
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.93
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.93
KOG4257|consensus	974		99.93
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.93
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.93
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.93
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.93
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.93
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.93
KOG4721|consensus	904		99.93
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.93
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.93
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.93
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.93
PLN00009	294	cyclin-dependent kinase A; Provisional	99.93
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.93
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.93
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.93
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.93
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.93
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.93
PTZ00284	467	protein kinase; Provisional	99.93
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.93
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.93
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.93
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.93
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.93
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.93
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.93
KOG0196|consensus	996		99.93
KOG4279|consensus	1226		99.93
KOG0984|consensus	282		99.93
KOG3653|consensus	534		99.93
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.93
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.93
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.93
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.93
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.93
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.93
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.93
KOG0587|consensus	953		99.92
KOG0669|consensus	376		99.92
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.92
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.92
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.92
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.92
KOG2052|consensus	513		99.92
KOG0664|consensus	449		99.92
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.92
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.92
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.92
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.92
KOG0614|consensus	732		99.92
PHA03210	501	serine/threonine kinase US3; Provisional	99.92
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.92
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.92
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.92
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.92
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.92
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.92
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.92
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.92
KOG1035|consensus	1351		99.92
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.92
KOG0665|consensus	369		99.92
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.92
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.92
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.92
KOG0695|consensus	593		99.92
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.92
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.92
KOG0983|consensus	391		99.91
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.91
KOG0200|consensus	609		99.91
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.91
KOG0596|consensus	677		99.91
PRK09188	365	serine/threonine protein kinase; Provisional	99.91
KOG1006|consensus	361		99.91
KOG4278|consensus	1157		99.91
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.91
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.91
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.91
KOG0696|consensus	683		99.91
KOG2345|consensus	302		99.91
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.9
KOG0671|consensus	415		99.9
KOG0670|consensus	752		99.9
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.9
KOG0576|consensus	829		99.89
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.89
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.89
KOG0668|consensus	338		99.89
KOG0199|consensus	1039		99.89
KOG0603|consensus	612		99.89
PHA02882	294	putative serine/threonine kinase; Provisional	99.89
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.89
KOG1151|consensus	775		99.89
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.89
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.88
KOG1025|consensus	1177		99.86
KOG1027|consensus	903		99.86
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.85
KOG1345|consensus	378		99.85
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.85
PRK10345	210	hypothetical protein; Provisional	99.83
KOG1163|consensus	341		99.8
smart00090	237	RIO RIO-like kinase.	99.79
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.79
KOG1167|consensus	418		99.78
PLN00181	793	protein SPA1-RELATED; Provisional	99.78
PRK12274	218	serine/threonine protein kinase; Provisional	99.78
PRK14879	211	serine/threonine protein kinase; Provisional	99.78
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.77
KOG1164|consensus	322		99.74
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.74
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.73
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.72
KOG1024|consensus	563		99.71
KOG1165|consensus	449		99.7
KOG0590|consensus	601		99.7
KOG1166|consensus	974		99.7
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.69
KOG1290|consensus	590		99.67
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.64
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.62
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.49
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.48
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.46
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.45
KOG3087|consensus	229		99.43
KOG0603|consensus	612		99.43
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.4
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.38
KOG4158|consensus	598		99.35
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.35
KOG1023|consensus	484		99.3
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.3
KOG1243|consensus	690		99.25
KOG1240|consensus	1431		99.23
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.19
KOG3741|consensus	655		99.18
KOG0195|consensus	448		99.15
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.15
KOG1033|consensus	516		99.14
KOG0590|consensus	601		99.14
KOG0606|consensus	1205		99.08
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	99.07
KOG0601|consensus	524		98.93
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.87
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.78
KOG1266|consensus	458		98.64
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.61
PRK09902	216	hypothetical protein; Provisional	98.57
KOG0601|consensus	524		98.57
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.55
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.52
KOG1235|consensus	538		98.42
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.37
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	98.13
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.07
PLN02876	822	acyl-CoA dehydrogenase	98.07
PF01636	239	APH: Phosphotransferase enzyme family This family	97.95
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.77
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.73
KOG0576|consensus	829		97.65
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.59
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	97.54
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.49
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.46
PRK05231	319	homoserine kinase; Provisional	97.43
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	97.36
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.31
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.27
KOG0606|consensus	1205		97.19
PRK10593	297	hypothetical protein; Provisional	97.18
KOG2270|consensus	520		96.65
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	96.56
KOG2137|consensus	700		96.45
COG4248	637	Uncharacterized protein with protein kinase and he	96.42
KOG2268|consensus	465		96.24
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	96.23
PLN02756	418	S-methyl-5-thioribose kinase	96.16
PRK06148	1013	hypothetical protein; Provisional	95.99
KOG1035|consensus	1351		95.72
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	95.64
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	95.53
PRK10271	188	thiK thiamine kinase; Provisional	95.31
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	95.29
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	95.19
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	94.93
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	94.57
COG2334	331	Putative homoserine kinase type II (protein kinase	94.47
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	94.46
PTZ00384	383	choline kinase; Provisional	94.15
PLN02236	344	choline kinase	93.94
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	93.75
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	93.56
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	93.15
KOG1290|consensus	590		92.16
PRK06149	972	hypothetical protein; Provisional	92.02
PRK12396	409	5-methylribose kinase; Reviewed	91.97

>KOG0595|consensus

Probab=100.00  E-value=4.3e-41  Score=248.33  Aligned_cols=164  Identities=20%  Similarity=0.325  Sum_probs=150.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      +|.-++|.||++++..++.+||+|.+...+ ....++.+..|+.+|+.++|||||.+++++++++.+|+|||||+||+|.
T Consensus        18 iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs   97 (429)
T KOG0595|consen   18 IGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLS   97 (429)
T ss_pred             ccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHH
Confidence            467789999999999999999999998554 7777888899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC------CceEEecccCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD------LSVKISLSGLS  153 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~------~~~ki~dfg~a  153 (183)
                      +++...+               .+++.+++.++.|++.|+++||+++||||||||.|||++..      ...||+|||+|
T Consensus        98 ~yi~~~~---------------~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA  162 (429)
T KOG0595|consen   98 DYIRRRG---------------RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA  162 (429)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence            9999886               49999999999999999999999999999999999999754      56899999999


Q ss_pred             CCCCcc----cccceeeeeecccCCCcccc
Q psy2674         154 KDTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +....+    ..+|++.|||||++....||
T Consensus       163 R~L~~~~~a~tlcGSplYMAPEV~~~~~Yd  192 (429)
T KOG0595|consen  163 RFLQPGSMAETLCGSPLYMAPEVIMSQQYD  192 (429)
T ss_pred             hhCCchhHHHHhhCCccccCHHHHHhcccc
Confidence            988765    46889999999999887776

>KOG0615|consensus

Probab=100.00  E-value=4.8e-39  Score=237.80  Aligned_cols=164  Identities=20%  Similarity=0.286  Sum_probs=144.1

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCH------HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDD------EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      +|--++|.|..|.+..+|+.||+|++++....      .......+|+++|++++||+|+++.++|+.++..|+|+||++
T Consensus       180 LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~  259 (475)
T KOG0615|consen  180 LGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVE  259 (475)
T ss_pred             ecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEec
Confidence            46778999999999999999999999843211      122245799999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC---CceEEeccc
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---LSVKISLSG  151 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~---~~~ki~dfg  151 (183)
                      ||+|.+.+-..+               .+.+.....++.|++.|+.|||++||+||||||+|||+..+   ..+||+|||
T Consensus       260 GGeLfd~vv~nk---------------~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFG  324 (475)
T KOG0615|consen  260 GGELFDKVVANK---------------YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFG  324 (475)
T ss_pred             CccHHHHHHhcc---------------ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccc
Confidence            999999998775               48888899999999999999999999999999999999755   889999999


Q ss_pred             CCCCCCc----ccccceeeeeecccCCCcccc
Q psy2674         152 LSKDTYQ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       152 ~a~~~~~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +|+....    +..|||+.|.|||++.++.+.
T Consensus       325 lAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~  356 (475)
T KOG0615|consen  325 LAKVSGEGSFMKTLCGTPSYVAPEVLASKGVE  356 (475)
T ss_pred             hhhccccceehhhhcCCccccChhheecCCee
Confidence            9997643    468999999999999886654

>KOG0593|consensus

Probab=100.00  E-value=1.9e-39  Score=232.20  Aligned_cols=165  Identities=21%  Similarity=0.320  Sum_probs=145.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--..+.|++|++..+|+.||+|++..+.+ +...+-..||+.++++++|+|+|.++++|.....+++|+|||+ -++.+
T Consensus        11 GEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~d-hTvL~   89 (396)
T KOG0593|consen   11 GEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCD-HTVLH   89 (396)
T ss_pred             ccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecc-hHHHH
Confidence            456678899999999999999999985555 5544455899999999999999999999999999999999999 77777


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-cc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-QK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-~~  159 (183)
                      .+.+...              +++...+..+++|++.|+.|||+++++||||||+|||++.++.+|+||||+|+... ++
T Consensus        90 eLe~~p~--------------G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg  155 (396)
T KOG0593|consen   90 ELERYPN--------------GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG  155 (396)
T ss_pred             HHHhccC--------------CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence            7777654              69999999999999999999999999999999999999999999999999999776 33


Q ss_pred             ----cccceeeeeecccCCC-----cccccc
Q psy2674         160 ----EYYKYRWVICSNIAEG-----RRLNVF  181 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~-----~~~~~~  181 (183)
                          +|..|+||+|||++-|     ++.|+|
T Consensus       156 d~YTDYVATRWYRaPELLvGDtqYG~pVDiW  186 (396)
T KOG0593|consen  156 DNYTDYVATRWYRAPELLVGDTQYGKPVDIW  186 (396)
T ss_pred             chhhhhhhhhhccChhhhcccCcCCCcccch
Confidence                5677999999999876     555666

>KOG0581|consensus

Probab=100.00  E-value=1.9e-38  Score=231.96  Aligned_cols=164  Identities=18%  Similarity=0.239  Sum_probs=151.2

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc-cEEEEeeCCCCCHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP-HYLLLEYTDWGDLK   79 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~e~~~~~~L~   79 (183)
                      +|.-..|.|+++.+..+++.+|+|.+....+++.+.++.+|+++++.++||+||.+++.|.+++. +.++||||++|+|.
T Consensus        87 lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd  166 (364)
T KOG0581|consen   87 LGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLD  166 (364)
T ss_pred             cccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHH
Confidence            35667889999999999999999999877788888899999999999999999999999999884 99999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ..+...+               .+++.....++.++++||.|||+ .+|+||||||+|+|++..|.+||+|||.+.....
T Consensus       167 ~~~k~~g---------------~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn  231 (364)
T KOG0581|consen  167 DILKRVG---------------RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN  231 (364)
T ss_pred             HHHhhcC---------------CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence            9998775               49999999999999999999995 8999999999999999999999999999985543


Q ss_pred             ---ccccceeeeeecccCCCcccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~~  179 (183)
                         +.+.||..|||||-+.|..|+
T Consensus       232 S~a~tfvGT~~YMsPERi~g~~Ys  255 (364)
T KOG0581|consen  232 SIANTFVGTSAYMSPERISGESYS  255 (364)
T ss_pred             hhcccccccccccChhhhcCCcCC
Confidence               578899999999999998874

>KOG0575|consensus

Probab=100.00  E-value=7.3e-37  Score=235.41  Aligned_cols=162  Identities=21%  Similarity=0.292  Sum_probs=147.5

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|--++|+||.+++..+|..||+|++.+..  .+..++.+.+||++-+.++|||||+++++|++.+.+|++.|+|..++|
T Consensus        26 LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL  105 (592)
T KOG0575|consen   26 LGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSL  105 (592)
T ss_pred             eccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccH
Confidence            356789999999999999999999998542  455677899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ..++++.+               .++|..++.++.||+.|+.|||+++|+|||||..|++++++..+||+|||+|.....
T Consensus       106 ~el~Krrk---------------~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~  170 (592)
T KOG0575|consen  106 MELLKRRK---------------PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEY  170 (592)
T ss_pred             HHHHHhcC---------------CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecC
Confidence            99998664               599999999999999999999999999999999999999999999999999986653


Q ss_pred             -----ccccceeeeeecccCCCcc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~  177 (183)
                           ...|||+.|.|||++....
T Consensus       171 ~~Erk~TlCGTPNYIAPEVl~k~g  194 (592)
T KOG0575|consen  171 DGERKKTLCGTPNYIAPEVLNKSG  194 (592)
T ss_pred             cccccceecCCCcccChhHhccCC
Confidence                 2679999999999997543

>KOG0600|consensus

Probab=100.00  E-value=6.8e-37  Score=231.25  Aligned_cols=159  Identities=23%  Similarity=0.296  Sum_probs=139.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   78 (183)
                      |--.++.||+|++..+|+.||+|.+.... ++.......|||.+|+.++||||+++.+...+.  +.+|+|+|||+ .+|
T Consensus       126 GeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMd-hDL  204 (560)
T KOG0600|consen  126 GEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMD-HDL  204 (560)
T ss_pred             cCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEeccc-chh
Confidence            44567889999999999999999987333 333444678999999999999999999999876  68999999999 889


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .-++...+-              .+++.++..++.|++.||+|||.+|++|||||.+|||+|++|.+||+|||+|+.+..
T Consensus       205 ~GLl~~p~v--------------kft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~  270 (560)
T KOG0600|consen  205 SGLLSSPGV--------------KFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP  270 (560)
T ss_pred             hhhhcCCCc--------------ccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence            888866432              699999999999999999999999999999999999999999999999999996655


Q ss_pred             cc------ccceeeeeecccCCC
Q psy2674         159 KE------YYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~~------~~~~~~~~~pe~~~~  175 (183)
                      ..      ...|.||+|||++.|
T Consensus       271 ~~~~~~T~rVvTLWYRpPELLLG  293 (560)
T KOG0600|consen  271 SGSAPYTSRVVTLWYRPPELLLG  293 (560)
T ss_pred             CCCcccccceEEeeccChHHhcC
Confidence            43      345899999999998

>KOG0659|consensus

Probab=100.00  E-value=1.3e-36  Score=213.96  Aligned_cols=158  Identities=23%  Similarity=0.267  Sum_probs=140.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.+|.||+|++..+|+.||+|++....  +.-.. ...|||..|+.++|+||+.++++|.+.+.+.+|+||++ .+|+
T Consensus        11 GEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~-talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe   88 (318)
T KOG0659|consen   11 GEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINR-TALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLE   88 (318)
T ss_pred             cCcceEEEEEEEecCCCcEEEEEEeeccccccCccH-HHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-ccHH
Confidence            55678899999999999999999998443  22222 67899999999999999999999999999999999998 9999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ..++....              .++...+..|+.+++.|+.|||++.|+|||+||.|+|++.+|.+||+|||+|+...+.
T Consensus        89 ~vIkd~~i--------------~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p  154 (318)
T KOG0659|consen   89 VVIKDKNI--------------ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP  154 (318)
T ss_pred             HHhccccc--------------ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence            99987643              6889999999999999999999999999999999999999999999999999977654


Q ss_pred             c-----ccceeeeeecccCCC
Q psy2674         160 E-----YYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ~-----~~~~~~~~~pe~~~~  175 (183)
                      .     ...|+||+|||++.|
T Consensus       155 ~~~~~~~V~TRWYRAPELLfG  175 (318)
T KOG0659|consen  155 NRIQTHQVVTRWYRAPELLFG  175 (318)
T ss_pred             CcccccceeeeeccChHHhcc
Confidence            2     256899999999987

>KOG0591|consensus

Probab=100.00  E-value=1.1e-37  Score=221.33  Aligned_cols=169  Identities=20%  Similarity=0.244  Sum_probs=149.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeecc-CCCCHHHHHHHHHHHHHHhcCCCcceeeEEe-EEecCCc-cEEEEeeCCCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLV-HSKDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDP-HYLLLEYTDWGD   77 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~-~~~~~~~-~~lv~e~~~~~~   77 (183)
                      +|.-.+++||++.+..+|..+|.|.++ ..-+..+++....|+.+|++++||||+++++ .|..+.. ++++||+|++|+
T Consensus        27 IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GD  106 (375)
T KOG0591|consen   27 IGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGD  106 (375)
T ss_pred             HcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccC
Confidence            466778999999999999999999998 3346677888999999999999999999988 5555555 899999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--CC--ceecccccceeEeccCCceEEecccCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD--KR--LIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~--~~--ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      |.+++....+.           ...+++..+|.++.|+|.|+..||.  ..  +.||||||.||+++.+|.+|++|||++
T Consensus       107 LsqmIk~~K~q-----------kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~  175 (375)
T KOG0591|consen  107 LSQMIKHFKKQ-----------KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLG  175 (375)
T ss_pred             HHHHHHHHHhc-----------cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhH
Confidence            99999987652           2468999999999999999999999  34  899999999999999999999999999


Q ss_pred             CCCCcc-----cccceeeeeecccCCCccccc
Q psy2674         154 KDTYQK-----EYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       154 ~~~~~~-----~~~~~~~~~~pe~~~~~~~~~  180 (183)
                      +...+.     .+.|||.||+||.+.+.+|+.
T Consensus       176 r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~  207 (375)
T KOG0591|consen  176 RFLSSKTTFAHSLVGTPYYMSPERIHESGYNF  207 (375)
T ss_pred             hHhcchhHHHHhhcCCCcccCHHHHhcCCCCc
Confidence            977665     578999999999999999964

>KOG0611|consensus

Probab=100.00  E-value=2.2e-36  Score=224.40  Aligned_cols=164  Identities=21%  Similarity=0.337  Sum_probs=150.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--..++|.+|++...|+.||+|.+.+.  .+.++.-.+.+||+++..++||||+.++++|++.+.+.+||||..+|.|.
T Consensus        62 GkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLY  141 (668)
T KOG0611|consen   62 GKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELY  141 (668)
T ss_pred             cCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHH
Confidence            4556788999999999999999999844  45666778999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ++++..+.               +++..++.++.||.+++-|||.++++|||+|..|||+|.++.+||+|||++..+..+
T Consensus       142 DYiSer~~---------------LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~  206 (668)
T KOG0611|consen  142 DYISERGS---------------LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK  206 (668)
T ss_pred             HHHHHhcc---------------ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc
Confidence            99998864               999999999999999999999999999999999999999999999999999877665


Q ss_pred             ----cccceeeeeecccCCCccccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~~  180 (183)
                          .+||++.|++||+..|.||..
T Consensus       207 kfLqTFCGSPLYASPEIvNG~PY~G  231 (668)
T KOG0611|consen  207 KFLQTFCGSPLYASPEIVNGTPYKG  231 (668)
T ss_pred             cHHHHhcCCcccCCccccCCCCCCC
Confidence                578899999999999999843

>KOG0598|consensus

Probab=100.00  E-value=2.9e-36  Score=220.47  Aligned_cols=164  Identities=20%  Similarity=0.306  Sum_probs=148.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--++++|+.++...+++.+|+|++++..  .....+....|.+++..++||+||.++-.|++.+.+|+|+||+.||.|.
T Consensus        34 GkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf  113 (357)
T KOG0598|consen   34 GKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELF  113 (357)
T ss_pred             eccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHH
Confidence            55678999999999999999999998553  2334668899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC--
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY--  157 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~--  157 (183)
                      .++++.+.               +++..+..++.+|+.||.|||++||||||+||+|||+|..|.++|+|||+|+...  
T Consensus       114 ~hL~~eg~---------------F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~  178 (357)
T KOG0598|consen  114 YHLQREGR---------------FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD  178 (357)
T ss_pred             HHHHhcCC---------------cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence            99998864               9999999999999999999999999999999999999999999999999998433  


Q ss_pred             ---cccccceeeeeecccCCCccccc
Q psy2674         158 ---QKEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       158 ---~~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                         ....+||+-|+|||++.+.+||.
T Consensus       179 ~~~t~tfcGT~eYmAPEil~~~gy~~  204 (357)
T KOG0598|consen  179 GDATRTFCGTPEYMAPEILLGKGYDK  204 (357)
T ss_pred             CCccccccCCccccChHHHhcCCCCc
Confidence               34679999999999999988864

>KOG0616|consensus

Probab=100.00  E-value=9.2e-36  Score=212.46  Aligned_cols=164  Identities=20%  Similarity=0.282  Sum_probs=151.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|.-.+++|..+++..+|.-+|+|++++..  ...+.+...+|..+|+.+.||+++++++.|.+.+.++++|||++||.|
T Consensus        52 lGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGEl  131 (355)
T KOG0616|consen   52 LGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGEL  131 (355)
T ss_pred             eccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccH
Confidence            477889999999999999999999998553  345667888999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++++.++               +++..++.+++||+.|++|||+++|++||+||+|||+|.+|.+||+|||+|+....
T Consensus       132 FS~Lrk~~r---------------F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~  196 (355)
T KOG0616|consen  132 FSYLRKSGR---------------FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG  196 (355)
T ss_pred             HHHHHhcCC---------------CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence            999998864               99999999999999999999999999999999999999999999999999997776


Q ss_pred             c--cccceeeeeecccCCCcccc
Q psy2674         159 K--EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ~--~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +  ..|||+-|.|||++.+++|+
T Consensus       197 rT~TlCGTPeYLAPEii~sk~yn  219 (355)
T KOG0616|consen  197 RTWTLCGTPEYLAPEIIQSKGYN  219 (355)
T ss_pred             cEEEecCCccccChHHhhcCCCC
Confidence            6  56899999999999999885

>KOG0661|consensus

Probab=100.00  E-value=1.2e-36  Score=228.54  Aligned_cols=159  Identities=25%  Similarity=0.358  Sum_probs=140.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCC-ccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGD-PHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~   79 (183)
                      |--.+|.|++|....++..||+|.++.+--......=.||+..|++++ ||||+++++++.+.+ .+++|||||+ .+|.
T Consensus        19 GDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLY   97 (538)
T KOG0661|consen   19 GDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLY   97 (538)
T ss_pred             cCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHH
Confidence            556788899999999999999999984433222224579999999997 999999999999877 8999999999 9999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ++++.+.+              .+++..++.|+.||++||.|+|.+|+.|||+||+|||+.....+||+|||+|+...+.
T Consensus        98 qLmK~R~r--------------~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk  163 (538)
T KOG0661|consen   98 QLMKDRNR--------------LFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK  163 (538)
T ss_pred             HHHhhcCC--------------cCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccC
Confidence            99988754              7999999999999999999999999999999999999998999999999999977664


Q ss_pred             ----cccceeeeeecccCCC
Q psy2674         160 ----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~  175 (183)
                          +|..|+||+|||++..
T Consensus       164 pPYTeYVSTRWYRAPEvLLr  183 (538)
T KOG0661|consen  164 PPYTEYVSTRWYRAPEVLLR  183 (538)
T ss_pred             CCcchhhhcccccchHHhhh
Confidence                5778999999999865

>KOG0583|consensus

Probab=100.00  E-value=2.8e-35  Score=223.99  Aligned_cols=167  Identities=17%  Similarity=0.253  Sum_probs=146.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCC----CCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHS----KDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      +|.-.+|+|+.+.+..++..||+|++...    ......+.+.+|+.+++.++ ||||+++++++..+..++++|||+.|
T Consensus        25 lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~g  104 (370)
T KOG0583|consen   25 LGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSG  104 (370)
T ss_pred             ecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCC
Confidence            35667899999999999999999987643    11133446779999999997 99999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC-CceEEecccCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGLSK  154 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~-~~~ki~dfg~a~  154 (183)
                      |+|.+++...+               .+.+..+..++.|+++||+|||++||+||||||+|++++.+ +.+||+|||++.
T Consensus       105 GdL~~~i~~~g---------------~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~  169 (370)
T KOG0583|consen  105 GDLFDYIVNKG---------------RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSA  169 (370)
T ss_pred             ccHHHHHHHcC---------------CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence            99999999854               48899999999999999999999999999999999999988 999999999998


Q ss_pred             CCC-----cccccceeeeeecccCCCcc-ccccc
Q psy2674         155 DTY-----QKEYYKYRWVICSNIAEGRR-LNVFK  182 (183)
Q Consensus       155 ~~~-----~~~~~~~~~~~~pe~~~~~~-~~~~~  182 (183)
                      ...     ....+|++.|+|||++.++. |++.+
T Consensus       170 ~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~  203 (370)
T KOG0583|consen  170 ISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKA  203 (370)
T ss_pred             ccCCCCCcccCCCCCcccCCHHHhCCCCCcCCch
Confidence            662     24678999999999999988 86543

>KOG0588|consensus

Probab=100.00  E-value=3.3e-35  Score=228.30  Aligned_cols=166  Identities=17%  Similarity=0.223  Sum_probs=150.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.-++|-.|++..+|+.+|||++.+.  ..+.....+.+||-+|+.+.|||++++++++++...+|++.||+++|.|.
T Consensus        21 G~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELF  100 (786)
T KOG0588|consen   21 GKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELF  100 (786)
T ss_pred             cCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhH
Confidence            4556678899999999999999999844  33445568899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++-+.++               +++..+..+++||+.|+.|||..+|+|||+||.|+|+|.++.+||+|||.|.....+
T Consensus       101 dylv~kG~---------------l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen  101 DYLVRKGP---------------LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG  165 (786)
T ss_pred             HHHHhhCC---------------CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence            99988864               999999999999999999999999999999999999999888999999999977665


Q ss_pred             ----cccceeeeeecccCCCccccccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLNVFK  182 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~~~~  182 (183)
                          ..||.+.|+|||++.|++||+.+
T Consensus       166 klLeTSCGSPHYA~PEIV~G~pYdG~~  192 (786)
T KOG0588|consen  166 KLLETSCGSPHYAAPEIVSGRPYDGRP  192 (786)
T ss_pred             ccccccCCCcccCCchhhcCCCCCCCc
Confidence                67899999999999999997654

>KOG0592|consensus

Probab=100.00  E-value=6.2e-34  Score=216.88  Aligned_cols=164  Identities=19%  Similarity=0.235  Sum_probs=143.8

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      +|.-.++.|++|++..+++++|+|++.+.-  .+.......+|-+.|..+ .||+|++++-.|.|+..+|+++||+++|+
T Consensus        81 lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGd  160 (604)
T KOG0592|consen   81 LGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGD  160 (604)
T ss_pred             eccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCc
Confidence            466778899999999999999999997542  122233567888889999 89999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.+.+.               +++..++.++.+|+.||+|||++|||||||||+|||+|.++.++|.|||.|....
T Consensus       161 ll~~i~K~Gs---------------fde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~  225 (604)
T KOG0592|consen  161 LLDLIKKYGS---------------FDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILS  225 (604)
T ss_pred             HHHHHHHhCc---------------chHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence            9999999864               9999999999999999999999999999999999999999999999999988543


Q ss_pred             c------------------ccccceeeeeecccCCCcccc
Q psy2674         158 Q------------------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~------------------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +                  ..++||..|.+||++.+++.+
T Consensus       226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~  265 (604)
T KOG0592|consen  226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAG  265 (604)
T ss_pred             hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCC
Confidence            2                  136789999999999876554

>KOG0594|consensus

Probab=100.00  E-value=1.4e-33  Score=205.78  Aligned_cols=163  Identities=21%  Similarity=0.307  Sum_probs=139.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcc-eeeEEeEEecCC------ccEEEEeeC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAH-VVKMIGICRDGD------PHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~------~~~lv~e~~   73 (183)
                      |--+.+.||+|++..+|+.||+|++....+ .-......+|+.+++.++|+| |+.+.+++.+.+      .+++++||+
T Consensus        20 GeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~   99 (323)
T KOG0594|consen   20 GEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFL   99 (323)
T ss_pred             CCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEee
Confidence            556788999999999999999999984433 223346789999999999999 999999998766      789999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      + .+|..++....+..           ..++...+..++.|++.||.|||+++|+|||+||.|+++++.+.+||+|||+|
T Consensus       100 d-~DL~~ymd~~~~~~-----------~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlA  167 (323)
T KOG0594|consen  100 D-RDLKKYMDSLPKKP-----------QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLA  167 (323)
T ss_pred             c-ccHHHHHHhccccc-----------cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchH
Confidence            8 99999998875311           25777899999999999999999999999999999999999999999999999


Q ss_pred             CCCCcc-----cccceeeeeecccCCCc
Q psy2674         154 KDTYQK-----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       154 ~~~~~~-----~~~~~~~~~~pe~~~~~  176 (183)
                      +...-.     ....|.||+|||++.|.
T Consensus       168 ra~~ip~~~yt~evvTlWYRaPEvLlGs  195 (323)
T KOG0594|consen  168 RAFSIPMRTYTPEVVTLWYRAPEVLLGS  195 (323)
T ss_pred             HHhcCCcccccccEEEeeccCHHHhcCC
Confidence            955422     34568999999999985

>KOG0663|consensus

Probab=100.00  E-value=1.3e-33  Score=204.58  Aligned_cols=158  Identities=23%  Similarity=0.368  Sum_probs=137.4

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCCCCHHH-HHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCCCHHH
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEA-LHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~~   80 (183)
                      -.++.||++++..+.+.||+|.++...+.+. .-.-.|||+++..++||||+.+.++....  +.+|++|||++ .+|.+
T Consensus        87 GtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~E-hDLks  165 (419)
T KOG0663|consen   87 GTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVE-HDLKS  165 (419)
T ss_pred             CcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHH-hhHHH
Confidence            4567899999999999999999985443221 11457899999999999999999998753  56999999999 99999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++...+.              .+....+..++.|++.|++|||++.|+|||+||+|+|++..|-+||+|||+|+.+.+. 
T Consensus       166 l~d~m~q--------------~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  166 LMETMKQ--------------PFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             HHHhccC--------------CCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc
Confidence            9988763              6889999999999999999999999999999999999999999999999999977654 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ....|.||+|||++.|.
T Consensus       232 k~~T~lVVTLWYRaPELLLG~  252 (419)
T KOG0663|consen  232 KPYTPLVVTLWYRAPELLLGA  252 (419)
T ss_pred             ccCcceEEEeeecCHHHhcCC
Confidence                34568999999999984

>KOG0192|consensus

Probab=100.00  E-value=9.8e-33  Score=208.73  Aligned_cols=163  Identities=23%  Similarity=0.329  Sum_probs=137.4

Q ss_pred             CCCCCceeeeccCCCCcce-EEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-ccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSV-LMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-PHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~-vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L   78 (183)
                      |.-+++.||++.-  .|.. ||+|.+... .+....+.|.+|+.++.+++||||++++|++.++. ...+||||+++|+|
T Consensus        50 G~G~~g~V~~~~~--~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL  127 (362)
T KOG0192|consen   50 GSGSFGTVYKGKW--RGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSL  127 (362)
T ss_pred             ccCCceeEEEEEe--CCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcH
Confidence            5567788885543  4455 999999843 34444778999999999999999999999999877 79999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-ceecccccceeEeccCC-ceEEecccCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-LIHKDIAARNCLISSDL-SVKISLSGLSKDT  156 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-ivH~di~~~nil~~~~~-~~ki~dfg~a~~~  156 (183)
                      .+++....+             ..++...++.++.||+.|+.|||+++ |||||+||.|+|++.+. ++||+|||+++..
T Consensus       128 ~~~l~~~~~-------------~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~  194 (362)
T KOG0192|consen  128 SVLLHKKRK-------------RKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREK  194 (362)
T ss_pred             HHHHhhccc-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceee
Confidence            999987411             26999999999999999999999999 99999999999999997 9999999999744


Q ss_pred             Cc-----ccccceeeeeecccCC--Ccccc
Q psy2674         157 YQ-----KEYYKYRWVICSNIAE--GRRLN  179 (183)
Q Consensus       157 ~~-----~~~~~~~~~~~pe~~~--~~~~~  179 (183)
                      ..     ....||..|||||++.  +.+||
T Consensus       195 ~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~  224 (362)
T KOG0192|consen  195 VISKTSMTSVAGTYRWMAPEVLRGEKSPYT  224 (362)
T ss_pred             ccccccccCCCCCccccChhhhcCCCCcCC
Confidence            32     2357789999999999  55664

>KOG0597|consensus

Probab=100.00  E-value=1.1e-33  Score=216.92  Aligned_cols=163  Identities=18%  Similarity=0.308  Sum_probs=150.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.+++||+++...+.+.||+|.+.+ ++.....+.+.+|+++++.++||||+.++++|+...+.|+|.||+. |+|..
T Consensus        11 G~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~-g~L~~   89 (808)
T KOG0597|consen   11 GEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAV-GDLFT   89 (808)
T ss_pred             cCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhh-hhHHH
Confidence            566789999999999999999999984 4566678899999999999999999999999999999999999998 59999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE  160 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~  160 (183)
                      ++...+               .++++.+..++.++++|+.|||+++|+|||+||.|||++.++.+|++|||+|+....+.
T Consensus        90 il~~d~---------------~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t  154 (808)
T KOG0597|consen   90 ILEQDG---------------KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNT  154 (808)
T ss_pred             HHHhcc---------------CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCc
Confidence            998765               49999999999999999999999999999999999999999999999999999877663


Q ss_pred             -----ccceeeeeecccCCCccccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~~~  180 (183)
                           .-||+.|||||+..+.+||-
T Consensus       155 ~vltsikGtPlYmAPElv~e~pyd~  179 (808)
T KOG0597|consen  155 SVLTSIKGTPLYMAPELVEEQPYDH  179 (808)
T ss_pred             eeeeeccCcccccCHHHHcCCCccc
Confidence                 45799999999999999974

>KOG0578|consensus

Probab=100.00  E-value=3.2e-33  Score=213.79  Aligned_cols=162  Identities=18%  Similarity=0.275  Sum_probs=144.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |-.+-+-||.|....+++.||+|.+....-+ ..+-+.+|+.+++..+|+||+.+++.|...+.+|++|||++||+|.+.
T Consensus       282 gqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~-~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDv  360 (550)
T KOG0578|consen  282 GQGATGGVYVARKISTKQEVAIKRMDLRKQP-KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDV  360 (550)
T ss_pred             ccccccceeeeeeccCCceEEEEEEEeccCC-chhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhh
Confidence            5566677899999999999999999744322 234678999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .++|.++..++.+++.||+|||.+||+|||||.+|||++.++.+||+||||+..+...  
T Consensus       361 Vt~~----------------~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~  424 (550)
T KOG0578|consen  361 VTKT----------------RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS  424 (550)
T ss_pred             hhcc----------------cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC
Confidence            9776                5899999999999999999999999999999999999999999999999999876553  


Q ss_pred             ---cccceeeeeecccCCCccccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~~~  180 (183)
                         ..+||++|||||+...+.|++
T Consensus       425 KR~TmVGTPYWMAPEVvtrk~YG~  448 (550)
T KOG0578|consen  425 KRSTMVGTPYWMAPEVVTRKPYGP  448 (550)
T ss_pred             ccccccCCCCccchhhhhhcccCc
Confidence               578999999999998887754

>KOG0198|consensus

Probab=100.00  E-value=3.9e-32  Score=200.44  Aligned_cols=159  Identities=18%  Similarity=0.259  Sum_probs=139.3

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC--ccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD--PHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L   78 (183)
                      +|--.++.|+.+....+|...|+|.+....... .+.+.+|+.+|..++|||||+++|......  .++++|||+++|+|
T Consensus        25 lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL  103 (313)
T KOG0198|consen   25 LGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSL  103 (313)
T ss_pred             ccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcH
Confidence            356678899999999999999999988553333 567899999999999999999999744433  68899999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~  157 (183)
                      .+++.+.+.              .+++..++.+..|++.|+.|||++|++|+||||+|||++. ++.+||+|||++....
T Consensus       104 ~~~~~~~g~--------------~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~  169 (313)
T KOG0198|consen  104 SDLIKRYGG--------------KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE  169 (313)
T ss_pred             HHHHHHcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence            999998752              4899999999999999999999999999999999999999 7999999999988555


Q ss_pred             c--------ccccceeeeeecccCC
Q psy2674         158 Q--------KEYYKYRWVICSNIAE  174 (183)
Q Consensus       158 ~--------~~~~~~~~~~~pe~~~  174 (183)
                      .        ....+|+.|||||++.
T Consensus       170 ~~~~~~~~~~~~~Gtp~~maPEvi~  194 (313)
T KOG0198|consen  170 SKGTKSDSELSVQGTPNYMAPEVIR  194 (313)
T ss_pred             cccccccccccccCCccccCchhhc
Confidence            2        2467899999999998

>KOG0582|consensus

Probab=100.00  E-value=3.7e-32  Score=203.20  Aligned_cols=157  Identities=18%  Similarity=0.242  Sum_probs=140.5

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHH
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL   83 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   83 (183)
                      -+-|.||.|+....+..||+|+++..+-....+.+.+|++.+..++||||+.++..|..+..+|+||.+|.+|++.+.++
T Consensus        37 G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik  116 (516)
T KOG0582|consen   37 GASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIK  116 (516)
T ss_pred             cceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHH
Confidence            34478999999999999999999966655557899999999999999999999999999999999999999999999999


Q ss_pred             hhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-----
Q psy2674          84 ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-----  158 (183)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-----  158 (183)
                      ...+             .+++|..+..+..+++.||.|||++|.||||+|+.|||++.+|.+||+|||.+.-...     
T Consensus       117 ~~~~-------------~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~  183 (516)
T KOG0582|consen  117 TYYP-------------DGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQ  183 (516)
T ss_pred             HHcc-------------ccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCcee
Confidence            8755             3599999999999999999999999999999999999999999999999998653322     


Q ss_pred             ----ccccceeeeeecccC
Q psy2674         159 ----KEYYKYRWVICSNIA  173 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~  173 (183)
                          +...++++|+|||++
T Consensus       184 ~~rf~tfvgtp~wmAPEvl  202 (516)
T KOG0582|consen  184 VTRFNTFVGTPCWMAPEVL  202 (516)
T ss_pred             eEeeccccCcccccChHHh
Confidence                345678999999994

>KOG1026|consensus

Probab=100.00  E-value=2.8e-32  Score=216.96  Aligned_cols=173  Identities=34%  Similarity=0.594  Sum_probs=146.1

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      ||-|+.|+.+--....+...||||.++..++.++++.|+||++++..++|||||+++|+|..+++.++++|||..|||.+
T Consensus       499 FGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~e  578 (774)
T KOG1026|consen  499 FGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHE  578 (774)
T ss_pred             hhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHH
Confidence            45566666665556678899999999988888888999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE  160 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~  160 (183)
                      ++....+......... .....++..+.+.++.||+.|++||.++.+|||||..+|+|+..+..+||+|||+++...+.+
T Consensus       579 FLra~sP~a~~~~~g~-~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssD  657 (774)
T KOG1026|consen  579 FLRARSPKADKLASGQ-DTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSD  657 (774)
T ss_pred             HHHhhCCccccccCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhh
Confidence            9988765322221111 125578999999999999999999999999999999999999999999999999999988887


Q ss_pred             ccce-------eeeeecccCC
Q psy2674         161 YYKY-------RWVICSNIAE  174 (183)
Q Consensus       161 ~~~~-------~~~~~pe~~~  174 (183)
                      ||..       -.|||||.+.
T Consensus       658 YYk~~~~t~lPIRWMppEsIl  678 (774)
T KOG1026|consen  658 YYKVRGNTLLPIRWMPPESIL  678 (774)
T ss_pred             hhcccCCceeeeecCCHHHhh
Confidence            7762       2356777654

>KOG0605|consensus

Probab=99.98  E-value=5.1e-32  Score=206.14  Aligned_cols=138  Identities=25%  Similarity=0.313  Sum_probs=127.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--++|.|+.|....+|..+|+|++.++..  ..+.+....|-.+|....++.||+++-+|++.+.+|++|||++||++.
T Consensus       150 gkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~m  229 (550)
T KOG0605|consen  150 GKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMM  229 (550)
T ss_pred             ccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHH
Confidence            556899999999999999999999986543  335567888999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      .++...+               .+++..++.++++++.||+-+|+.|+|||||||+|+|+|..|.+||+|||++.
T Consensus       230 TLL~~~~---------------~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  230 TLLMRKD---------------TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLST  289 (550)
T ss_pred             HHHHhcC---------------cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccc
Confidence            9999886               49999999999999999999999999999999999999999999999999985

>KOG0589|consensus

Probab=99.98  E-value=4e-32  Score=205.71  Aligned_cols=165  Identities=19%  Similarity=0.312  Sum_probs=148.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc-cEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP-HYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-~~lv~e~~~~~~L~   79 (183)
                      |.-+++.++.+++..++..+++|.+...+ ....++...+|+.++++++||||+.+.+.|..++. .+|+|+||+||++.
T Consensus        13 G~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~   92 (426)
T KOG0589|consen   13 GRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLA   92 (426)
T ss_pred             CccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHH
Confidence            56678888899999999999999998333 33344578899999999999999999999998887 99999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+.....             ..++++.++.|+.|++.|+.|||++.|+|||||+.||+++.++.++++|||+|+...+.
T Consensus        93 ~~i~~~k~-------------~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~  159 (426)
T KOG0589|consen   93 QLIKEQKG-------------VLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE  159 (426)
T ss_pred             HHHHHHhh-------------ccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence            99988752             26899999999999999999999999999999999999999999999999999987776


Q ss_pred             c-----ccceeeeeecccCCCcccc
Q psy2674         160 E-----YYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ~-----~~~~~~~~~pe~~~~~~~~  179 (183)
                      .     +.||+.|++||++.+.+|+
T Consensus       160 ~~~a~tvvGTp~YmcPEil~d~pYn  184 (426)
T KOG0589|consen  160 DSLASTVVGTPYYMCPEILSDIPYN  184 (426)
T ss_pred             hhhhheecCCCcccCHHHhCCCCCC
Confidence            4     8899999999999999985

>KOG0586|consensus

Probab=99.97  E-value=1.3e-31  Score=206.79  Aligned_cols=166  Identities=19%  Similarity=0.286  Sum_probs=150.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |-.-+|.|..+++..++..||+|++.+ ..+...++.+.+|+++++.++||||++++.+.+.+..+|+||||+.+|.+.+
T Consensus        65 g~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~  144 (596)
T KOG0586|consen   65 GKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFD  144 (596)
T ss_pred             ccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHH
Confidence            445678899999999999999999984 4566667779999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      ++...++               ..+..+..++.|++++++|||++.|+|||||+.|++++.+..+||+|||++.....  
T Consensus       145 yl~~~gr---------------~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~  209 (596)
T KOG0586|consen  145 YLVKHGR---------------MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL  209 (596)
T ss_pred             HHHhccc---------------chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccc
Confidence            9998875               66688999999999999999999999999999999999999999999999986654  


Q ss_pred             --ccccceeeeeecccCCCccccccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLNVFK  182 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~~~~  182 (183)
                        ..+++++-|+|||+..|..||+..
T Consensus       210 ~lqt~cgsppyAaPEl~~g~~y~gpe  235 (596)
T KOG0586|consen  210 MLQTFCGSPPYAAPELFNGKKYDGPE  235 (596)
T ss_pred             cccccCCCCCccChHhhcCcccCCcc
Confidence              467889999999999999998754

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.97  E-value=3.4e-31  Score=199.85  Aligned_cols=162  Identities=15%  Similarity=0.171  Sum_probs=140.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.+|+|++....  .......+.+|+.+++.++||||+++.+.+..++..+++|||+++++|.
T Consensus         4 G~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~   83 (323)
T cd05571           4 GKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELF   83 (323)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHH
Confidence            55678899999999999999999987432  2334456788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +.+....               .+++..+..++.|++.||+|||+++++||||||+||+++.++.++|+|||++..... 
T Consensus        84 ~~l~~~~---------------~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~  148 (323)
T cd05571          84 FHLSRER---------------VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD  148 (323)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC
Confidence            8887653               488999999999999999999999999999999999999999999999999875322 


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....+++.|+|||++.+..|
T Consensus       149 ~~~~~~~~gt~~y~aPE~~~~~~~  172 (323)
T cd05571         149 GATMKTFCGTPEYLAPEVLEDNDY  172 (323)
T ss_pred             CCcccceecCccccChhhhcCCCC
Confidence                23567899999999987655

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG4717|consensus

Probab=99.97  E-value=1.3e-31  Score=204.04  Aligned_cols=165  Identities=17%  Similarity=0.163  Sum_probs=149.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--.+|.|..|++.=+|..||||++.+.+ +......+.+|+.-++.++||||++++++...+..+|+++|.-++|+|.+
T Consensus        27 G~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~D  106 (864)
T KOG4717|consen   27 GRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFD  106 (864)
T ss_pred             cCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHH
Confidence            55667889999999999999999998554 55566789999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-cCCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-~~~~~ki~dfg~a~~~~~~  159 (183)
                      ++..+..              ++.+.....++.||+.++.|||+..+||||+||.|+.+. .-|.+|+.||||+..+.+.
T Consensus       107 yImKHe~--------------Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG  172 (864)
T KOG4717|consen  107 YIMKHEE--------------GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG  172 (864)
T ss_pred             HHHhhhc--------------cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence            9998875              799999999999999999999999999999999999886 6699999999999988775


Q ss_pred             ----cccceeeeeecccCCCccccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~~  180 (183)
                          ..||...|.|||++.|..||.
T Consensus       173 ~kL~TsCGSLAYSAPEILLGDsYDA  197 (864)
T KOG4717|consen  173 KKLTTSCGSLAYSAPEILLGDSYDA  197 (864)
T ss_pred             chhhcccchhhccCchhhhcCccCC
Confidence                567889999999999999874

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=3.3e-31  Score=202.87  Aligned_cols=163  Identities=21%  Similarity=0.234  Sum_probs=140.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.+|+|++....  .......+.+|+.++..++|++|+++++.+.+....+++|||+++++|.
T Consensus        10 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~   89 (363)
T cd05628          10 GRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMM   89 (363)
T ss_pred             EeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHH
Confidence            45577899999999999999999986432  2334457788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++...+               .+++..+..++.|++.||.|||++|++||||||+|||++.++.++|+|||++..... 
T Consensus        90 ~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~  154 (363)
T cd05628          90 TLLMKKD---------------TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA  154 (363)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence            9997653               488999999999999999999999999999999999999999999999999864321 


Q ss_pred             ---------------------------------------ccccceeeeeecccCCCcccc
Q psy2674         159 ---------------------------------------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ---------------------------------------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                                                             ...+||+.|+|||++.+..|+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~  214 (363)
T cd05628         155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYN  214 (363)
T ss_pred             ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCC
Confidence                                                   124678999999999876653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0660|consensus

Probab=99.97  E-value=7.1e-32  Score=196.97  Aligned_cols=162  Identities=23%  Similarity=0.368  Sum_probs=141.4

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeecc-CCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC-----CccEEEEeeCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLV-HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG-----DPHYLLLEYTD   74 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~   74 (183)
                      +|.-+.+-|-.|.+..+|+.||+|++. ...+.-..++..||+.+++.++|+||+.+.+.+..+     ..+|+++|+|+
T Consensus        30 iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elMe  109 (359)
T KOG0660|consen   30 IGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELME  109 (359)
T ss_pred             ccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHHh
Confidence            366677788889999999999999997 555666677899999999999999999999998752     34899999997


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       .+|.+.++...               .++..-+..+++|++.|+.|+|+.+++|||+||+|++++.+...||+|||+|+
T Consensus       110 -tDL~~iik~~~---------------~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR  173 (359)
T KOG0660|consen  110 -TDLHQIIKSQQ---------------DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLAR  173 (359)
T ss_pred             -hHHHHHHHcCc---------------cccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEecccccee
Confidence             99999998763               38999999999999999999999999999999999999999999999999999


Q ss_pred             CCCc-------ccccceeeeeecccCCC-ccc
Q psy2674         155 DTYQ-------KEYYKYRWVICSNIAEG-RRL  178 (183)
Q Consensus       155 ~~~~-------~~~~~~~~~~~pe~~~~-~~~  178 (183)
                      ....       .+++.|+||+|||++.+ ..|
T Consensus       174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Y  205 (359)
T KOG0660|consen  174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEY  205 (359)
T ss_pred             eccccCcccchhcceeeeeecCHHHHhccccc
Confidence            7743       36778999999999754 444

>KOG1187|consensus

Probab=99.97  E-value=4.2e-31  Score=200.74  Aligned_cols=165  Identities=24%  Similarity=0.359  Sum_probs=137.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-ccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-PHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~   80 (183)
                      |-..++.||++.-... ..||||.+....... ..+|.+|++++..++|||+++++|+|.+.+ ...+|+||+++|+|.+
T Consensus        84 g~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d  161 (361)
T KOG1187|consen   84 GEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLED  161 (361)
T ss_pred             ecCCCeEEEEEEECCC-CEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHH
Confidence            3345677887765544 999999887554432 335999999999999999999999999988 4999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---CceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK---RLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      ++.....             ..++|..++.|+.+++.||+|||..   .|+|||||++|||+|.+...||+|||+|+...
T Consensus       162 ~L~~~~~-------------~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~  228 (361)
T KOG1187|consen  162 HLHGKKG-------------EPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGP  228 (361)
T ss_pred             HhCCCCC-------------CCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCC
Confidence            9976532             0589999999999999999999985   49999999999999999999999999998766


Q ss_pred             c-ccc-----cceeeeeecccCCC----cccccc
Q psy2674         158 Q-KEY-----YKYRWVICSNIAEG----RRLNVF  181 (183)
Q Consensus       158 ~-~~~-----~~~~~~~~pe~~~~----~~~~~~  181 (183)
                      . ...     .+|.+|++||....    ...|+|
T Consensus       229 ~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVy  262 (361)
T KOG1187|consen  229 EGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVY  262 (361)
T ss_pred             ccccceeeecCCCCccCChhhhccCCcCcccccc
Confidence            4 322     67889999999853    455665

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=6.7e-31  Score=202.32  Aligned_cols=138  Identities=22%  Similarity=0.324  Sum_probs=124.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.+|+|++....  .......+.+|+++++.++|+||+++++.+.+++..+++|||+++++|.
T Consensus        10 G~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~   89 (381)
T cd05626          10 GIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMM   89 (381)
T ss_pred             eecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHH
Confidence            55678899999999999999999987432  3344567889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++....               .+++..+..++.|++.||.|||+.+++||||||+||+++.++.++|+|||++.
T Consensus        90 ~~l~~~~---------------~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~  149 (381)
T cd05626          90 SLLIRME---------------VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCT  149 (381)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCc
Confidence            9987653               48889999999999999999999999999999999999999999999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=8.4e-31  Score=196.81  Aligned_cols=163  Identities=13%  Similarity=0.185  Sum_probs=141.2

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|.-.++.||++.+..+++.||+|.+...  ........+.+|+.+++.++||||+++++.+.+++..++++||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            35667889999999999999999998632  2333455788999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.+....               .+++..+..++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        81 ~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~  145 (312)
T cd05585          81 FHHLQREG---------------RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMK  145 (312)
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCcc
Confidence            99987653               488899999999999999999999999999999999999999999999999875322


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....+++.|+|||++.+..|
T Consensus       146 ~~~~~~~~~gt~~y~aPE~~~~~~~  170 (312)
T cd05585         146 DDDKTNTFCGTPEYLAPELLLGHGY  170 (312)
T ss_pred             CCCccccccCCcccCCHHHHcCCCC
Confidence                 23567899999999987655

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0585|consensus

Probab=99.97  E-value=2.3e-31  Score=200.37  Aligned_cols=159  Identities=31%  Similarity=0.363  Sum_probs=133.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH-------------HHHHHHHHHHHHHhcCCCcceeeEEeEEecC--Ccc
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD-------------EALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPH   66 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~   66 (183)
                      |.-..|.|.+|++..+++.||+|++.+....             ...+...+||.+++++.|+|||+++++..++  +.+
T Consensus       106 G~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~  185 (576)
T KOG0585|consen  106 GSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKL  185 (576)
T ss_pred             cCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCce
Confidence            5566789999999999999999999743211             1235788999999999999999999999774  579


Q ss_pred             EEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceE
Q psy2674          67 YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK  146 (183)
Q Consensus        67 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~k  146 (183)
                      |||+|||..|.+...-...               ..+.+.+++.++.+++.||+|||.+||+||||||+|+|++.+|++|
T Consensus       186 YlVley~s~G~v~w~p~d~---------------~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VK  250 (576)
T KOG0585|consen  186 YLVLEYCSKGEVKWCPPDK---------------PELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVK  250 (576)
T ss_pred             EEEEEeccCCccccCCCCc---------------ccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEE
Confidence            9999999988775533221               1288999999999999999999999999999999999999999999


Q ss_pred             EecccCCCCCCc----------ccccceeeeeecccCCC
Q psy2674         147 ISLSGLSKDTYQ----------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       147 i~dfg~a~~~~~----------~~~~~~~~~~~pe~~~~  175 (183)
                      |+|||.+.....          ....||+.|+|||.+.+
T Consensus       251 IsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~  289 (576)
T KOG0585|consen  251 ISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSG  289 (576)
T ss_pred             eeccceeeecccCCccccHHHHhhcCCCccccchHhhcC
Confidence            999999875521          13578999999999877

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=3.7e-31  Score=200.12  Aligned_cols=162  Identities=18%  Similarity=0.235  Sum_probs=141.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++....  .....+.+.+|+.+++.++||||+++++.+.+++..+++|||+.+++|.
T Consensus        27 g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  106 (329)
T PTZ00263         27 GTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELF  106 (329)
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHH
Confidence            44567889999999999999999986432  2334557889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+...+               .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++......
T Consensus       107 ~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  171 (329)
T PTZ00263        107 THLRKAG---------------RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR  171 (329)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence            9987653               4788899999999999999999999999999999999999999999999999865443


Q ss_pred             --cccceeeeeecccCCCccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~  178 (183)
                        ...+++.|+|||++.+..+
T Consensus       172 ~~~~~gt~~y~aPE~~~~~~~  192 (329)
T PTZ00263        172 TFTLCGTPEYLAPEVIQSKGH  192 (329)
T ss_pred             cceecCChhhcCHHHHcCCCC
Confidence              3567899999999987654

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=9.3e-31  Score=201.28  Aligned_cols=138  Identities=24%  Similarity=0.305  Sum_probs=123.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++....  .....+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.
T Consensus        10 G~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~   89 (377)
T cd05629          10 GKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLM   89 (377)
T ss_pred             eecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHH
Confidence            45567899999999999999999986322  2334567889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++....               .+++..++.++.|++.||+|||+++++||||||+||+++.++.++|+|||++.
T Consensus        90 ~~l~~~~---------------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~  149 (377)
T cd05629          90 TMLIKYD---------------TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLST  149 (377)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccc
Confidence            9987653               48889999999999999999999999999999999999999999999999985

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=1.1e-30  Score=201.15  Aligned_cols=138  Identities=21%  Similarity=0.295  Sum_probs=123.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.+|+|++....  .......+.+|+.+++.++|+||+++++.+.+++..+++|||+++++|.
T Consensus        10 G~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~   89 (382)
T cd05625          10 GIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMM   89 (382)
T ss_pred             EeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHH
Confidence            45678899999999999999999987432  2334557889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +.+....               .+++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+|||++.
T Consensus        90 ~~l~~~~---------------~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625          90 SLLIRMG---------------IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence            9987653               47889999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=1.7e-30  Score=196.45  Aligned_cols=162  Identities=14%  Similarity=0.186  Sum_probs=140.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.||+|++....  .......+.+|+.+++.++||||+++.+.+.+++..+++|||+++++|.
T Consensus         4 G~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~   83 (328)
T cd05593           4 GKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELF   83 (328)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHH
Confidence            55678899999999999999999987432  2334557889999999999999999999999999999999999999998


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      ..+....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++..... 
T Consensus        84 ~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~  148 (328)
T cd05593          84 FHLSRER---------------VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD  148 (328)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc
Confidence            8886543               488999999999999999999999999999999999999999999999999875322 


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....+++.|+|||++.+..+
T Consensus       149 ~~~~~~~~gt~~y~aPE~~~~~~~  172 (328)
T cd05593         149 AATMKTFCGTPEYLAPEVLEDNDY  172 (328)
T ss_pred             ccccccccCCcCccChhhhcCCCC
Confidence                23467899999999887655

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=8.2e-31  Score=200.66  Aligned_cols=139  Identities=22%  Similarity=0.310  Sum_probs=124.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.||+|++....  .......+.+|+.+++.++|+||+++++.+.+++..+++|||+++++|.
T Consensus        10 G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~   89 (364)
T cd05599          10 GRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMM   89 (364)
T ss_pred             EecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHH
Confidence            45567899999999999999999987432  2334456789999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      +++....               .+++..++.++.|++.||.|||+++++||||||+|||++.++.++|+|||++..
T Consensus        90 ~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  150 (364)
T cd05599          90 TLLMKKD---------------TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTG  150 (364)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeeccccee
Confidence            9987653               488999999999999999999999999999999999999999999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>KOG0658|consensus

Probab=99.97  E-value=8.4e-32  Score=196.93  Aligned_cols=157  Identities=20%  Similarity=0.247  Sum_probs=131.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-----ccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-----PHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~   76 (183)
                      |.-.++.||.+....++++||+|.....+..     -.+|+++|+.+.||||+++.-+|....     ...+||||++ .
T Consensus        33 G~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP-~  106 (364)
T KOG0658|consen   33 GSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP-E  106 (364)
T ss_pred             eecccceEEEEEEcCCCceeEEEEecCCCCc-----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch-H
Confidence            6677889999999999999999998644332     246899999999999999988876422     2458999999 9


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKD  155 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~  155 (183)
                      +|.+.+......           +..++...+..+++|+++|+.|||+.||+||||||.|+|+|. .+.+||+|||.|+.
T Consensus       107 tL~~~~r~~~~~-----------~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~  175 (364)
T KOG0658|consen  107 TLYRVIRHYTRA-----------NQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV  175 (364)
T ss_pred             HHHHHHHHHhhc-----------CCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence            999999865331           135778889999999999999999999999999999999995 49999999999996


Q ss_pred             CCcc----cccceeeeeecccCCC
Q psy2674         156 TYQK----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       156 ~~~~----~~~~~~~~~~pe~~~~  175 (183)
                      ...+    .|..+++|+|||++.|
T Consensus       176 L~~~epniSYicSRyYRaPELifg  199 (364)
T KOG0658|consen  176 LVKGEPNISYICSRYYRAPELIFG  199 (364)
T ss_pred             eccCCCceeEEEeccccCHHHHcC
Confidence            6543    5778999999999988

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=1.5e-30  Score=196.42  Aligned_cols=162  Identities=15%  Similarity=0.193  Sum_probs=139.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..++..||+|++...  ........+.+|+.+++.++||||+++.+.+...+..+++|||+++++|.
T Consensus         4 G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~   83 (323)
T cd05595           4 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF   83 (323)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHH
Confidence            5567889999999999999999998743  22334456788999999999999999999999999999999999999998


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      ..+....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++..... 
T Consensus        84 ~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  148 (323)
T cd05595          84 FHLSRER---------------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  148 (323)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC
Confidence            8886543               488999999999999999999999999999999999999999999999999875322 


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....++..|+|||++.+..+
T Consensus       149 ~~~~~~~~gt~~y~aPE~~~~~~~  172 (323)
T cd05595         149 GATMKTFCGTPEYLAPEVLEDNDY  172 (323)
T ss_pred             CCccccccCCcCcCCcccccCCCC
Confidence                23567899999999987655

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-30  Score=196.96  Aligned_cols=162  Identities=19%  Similarity=0.234  Sum_probs=141.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.||+|++....  .......+.+|+++++.++|+||+++++.+.+++..+++|||+++++|.
T Consensus        10 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~   89 (333)
T cd05600          10 GQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFR   89 (333)
T ss_pred             eecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHH
Confidence            44567899999999999999999987432  2234457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++....               .+++..++.++.|++.||.+||+++++||||+|+||+++.++.++|+|||++..... 
T Consensus        90 ~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~  154 (333)
T cd05600          90 TLLNNLG---------------VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTY  154 (333)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccc
Confidence            9997653               488899999999999999999999999999999999999999999999999985543 


Q ss_pred             -ccccceeeeeecccCCCccc
Q psy2674         159 -KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~~  178 (183)
                       ....+++.|+|||++.+..+
T Consensus       155 ~~~~~gt~~y~aPE~~~~~~~  175 (333)
T cd05600         155 ANSVVGSPDYMAPEVLRGKGY  175 (333)
T ss_pred             cCCcccCccccChhHhcCCCC
Confidence             35678899999999887655

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0599|consensus

Probab=99.97  E-value=3e-31  Score=188.25  Aligned_cols=157  Identities=15%  Similarity=0.241  Sum_probs=139.2

Q ss_pred             ceeeeccCCCCcceEEEeeccCCC-------CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           7 ARGLKASDPQDTSVLMAKSLVHSK-------DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         7 ~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +.+-+|.+..+|.+.|+|++....       ....++...+|+.+++++ .||+|+.+.++++.+...++++|.++.|.|
T Consensus        31 s~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGEL  110 (411)
T KOG0599|consen   31 SVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGEL  110 (411)
T ss_pred             hhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchH
Confidence            446677889999999999986221       123456778899999999 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++...+.++.|++.+++|||.++|+|||+||.|||++++.+++|+|||+|....+
T Consensus       111 FDyLts~V---------------tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~  175 (411)
T KOG0599|consen  111 FDYLTSKV---------------TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEP  175 (411)
T ss_pred             HHHhhhhe---------------eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCC
Confidence            99998875               489999999999999999999999999999999999999999999999999998877


Q ss_pred             c----cccceeeeeecccCCCccc
Q psy2674         159 K----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      +    +.|||++|.|||.+...-|
T Consensus       176 GekLrelCGTPgYLAPEtikC~m~  199 (411)
T KOG0599|consen  176 GEKLRELCGTPGYLAPETIKCSMY  199 (411)
T ss_pred             chhHHHhcCCCcccChhheeeecc
Confidence            5    5789999999999876544

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=6e-31  Score=195.80  Aligned_cols=162  Identities=15%  Similarity=0.225  Sum_probs=140.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.+|+|++....  .....+.+.+|+++++.++||||+++++.+.+++..+++|||+++++|.
T Consensus        10 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~   89 (291)
T cd05612          10 GTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELF   89 (291)
T ss_pred             ecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHH
Confidence            45567899999999999999999986332  2234457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++....               .+++.....++.|++.|+.|||++|++||||+|+||+++.++.++|+|||++......
T Consensus        90 ~~~~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~  154 (291)
T cd05612          90 SYLRNSG---------------RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR  154 (291)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence            9987653               4888999999999999999999999999999999999999999999999999865443


Q ss_pred             --cccceeeeeecccCCCccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~  178 (183)
                        ...+++.|+|||++.+..+
T Consensus       155 ~~~~~gt~~y~aPE~~~~~~~  175 (291)
T cd05612         155 TWTLCGTPEYLAPEVIQSKGH  175 (291)
T ss_pred             cccccCChhhcCHHHHcCCCC
Confidence              3467889999999887654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=1.6e-30  Score=199.82  Aligned_cols=138  Identities=21%  Similarity=0.289  Sum_probs=122.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.+|+|++....  .......+.+|+.+++.++|+||+++++.+.+++..+++|||+++++|.
T Consensus        10 G~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~   89 (376)
T cd05598          10 GIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMM   89 (376)
T ss_pred             EeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHH
Confidence            55678899999999999999999986321  1223456789999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++...+               .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+|.
T Consensus        90 ~~i~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          90 SLLIRLG---------------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            9997653               47888999999999999999999999999999999999999999999999974

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=4.3e-30  Score=194.01  Aligned_cols=162  Identities=15%  Similarity=0.191  Sum_probs=138.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.+|+|++...  ........+.+|+++++.++|+||+++.+.+.+++..+++|||+++++|.
T Consensus         4 G~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~   83 (325)
T cd05594           4 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF   83 (325)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHH
Confidence            5567889999999999999999998743  22334456788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ..+....               .+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++.....
T Consensus        84 ~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~  148 (325)
T cd05594          84 FHLSRER---------------VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK  148 (325)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCC
Confidence            8886543               48899999999999999999997 7999999999999999999999999999874322


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....++..|+|||++.+..+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (325)
T cd05594         149 DGATMKTFCGTPEYLAPEVLEDNDY  173 (325)
T ss_pred             CCcccccccCCcccCCHHHHccCCC
Confidence                 23467899999999877654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.97  E-value=3.3e-30  Score=197.10  Aligned_cols=163  Identities=21%  Similarity=0.238  Sum_probs=140.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.+|+|++...  ........+.+|+.++..++|++|+++++.+.+++..+++|||+++++|.
T Consensus        10 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~   89 (360)
T cd05627          10 GRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMM   89 (360)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHH
Confidence            4556789999999999999999998632  12334557888999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++....               .+++..+..++.|++.||.+||++|++||||||+||+++.++.++|+|||++..... 
T Consensus        90 ~~l~~~~---------------~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~  154 (360)
T cd05627          90 TLLMKKD---------------TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA  154 (360)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence            9987653               488999999999999999999999999999999999999999999999999864321 


Q ss_pred             ---------------------------------------ccccceeeeeecccCCCcccc
Q psy2674         159 ---------------------------------------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ---------------------------------------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                                                             ....+|+.|+|||++.+..|+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~  214 (360)
T cd05627         155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYN  214 (360)
T ss_pred             cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCC
Confidence                                                   123578999999999876653

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.97  E-value=2.8e-30  Score=198.11  Aligned_cols=159  Identities=18%  Similarity=0.180  Sum_probs=137.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.+|+|++...  ........+.+|+.+++.++||||+++++.+.+++..+++|||+++++|.
T Consensus        52 G~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~  131 (370)
T cd05621          52 GRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV  131 (370)
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHH
Confidence            4456788999999999999999998632  12223446788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++...                .+++..+..++.|++.||+|||+++++||||||+|||++.++.+||+|||+|..... 
T Consensus       132 ~~l~~~----------------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~  195 (370)
T cd05621         132 NLMSNY----------------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET  195 (370)
T ss_pred             HHHHhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccC
Confidence            988643                478889999999999999999999999999999999999999999999999985532 


Q ss_pred             -----ccccceeeeeecccCCCc
Q psy2674         159 -----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~  176 (183)
                           ....+|+.|+|||++.+.
T Consensus       196 ~~~~~~~~~gt~~Y~aPE~~~~~  218 (370)
T cd05621         196 GMVRCDTAVGTPDYISPEVLKSQ  218 (370)
T ss_pred             CceecccCCCCcccCCHHHHhcc
Confidence                 234678999999998654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=2.5e-30  Score=196.41  Aligned_cols=162  Identities=18%  Similarity=0.210  Sum_probs=137.7

Q ss_pred             CCCCCceeeeccCCCC-cceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQD-TSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~-~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++....+ +..||+|.+...  ......+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|
T Consensus        39 g~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L  118 (340)
T PTZ00426         39 GTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEF  118 (340)
T ss_pred             eecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcH
Confidence            4556788999876554 478999998632  2233455788999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..+..++.|++.||.|||+++++||||||+|||++.++.++|+|||++.....
T Consensus       119 ~~~i~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~  183 (340)
T PTZ00426        119 FTFLRRNK---------------RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT  183 (340)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence            99997653               488999999999999999999999999999999999999999999999999986543


Q ss_pred             c--cccceeeeeecccCCCccc
Q psy2674         159 K--EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~--~~~~~~~~~~pe~~~~~~~  178 (183)
                      .  ...+++.|+|||++.+..+
T Consensus       184 ~~~~~~gt~~y~aPE~~~~~~~  205 (340)
T PTZ00426        184 RTYTLCGTPEYIAPEILLNVGH  205 (340)
T ss_pred             CcceecCChhhcCHHHHhCCCC
Confidence            2  4567889999999876544

>KOG0197|consensus

Probab=99.97  E-value=2.4e-30  Score=196.98  Aligned_cols=164  Identities=28%  Similarity=0.453  Sum_probs=131.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.--+|.|+.+.-. ....||+|.+......  .+.+.+|++++++++|++|++++++|..+++++|||||++.|+|.++
T Consensus       215 G~G~FG~V~~g~~~-~~~~vavk~ik~~~m~--~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~y  291 (468)
T KOG0197|consen  215 GSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS--PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDY  291 (468)
T ss_pred             cCCccceEEEEEEc-CCCcccceEEeccccC--hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHH
Confidence            44455666644332 2337899998755332  23688999999999999999999999998999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY  161 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~  161 (183)
                      +.....             ..+.....+.++.|||+|++||.++++|||||.++|||++++..+||+|||+|+....+.|
T Consensus       292 Lr~~~~-------------~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y  358 (468)
T KOG0197|consen  292 LRTREG-------------GLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEY  358 (468)
T ss_pred             hhhcCC-------------CccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCce
Confidence            987322             3688899999999999999999999999999999999999999999999999995544433


Q ss_pred             -------cceeeeeecccCC-C---ccccccc
Q psy2674         162 -------YKYRWVICSNIAE-G---RRLNVFK  182 (183)
Q Consensus       162 -------~~~~~~~~pe~~~-~---~~~~~~~  182 (183)
                             ++..|| |||.+. +   ...|+|+
T Consensus       359 ~~~~~~kfPIkWt-APEa~~~~~FS~kSDVWS  389 (468)
T KOG0197|consen  359 TASEGGKFPIKWT-APEALNYGKFSSKSDVWS  389 (468)
T ss_pred             eecCCCCCCceec-CHHHHhhCCcccccceee
Confidence                   345677 566654 3   3347764

>KOG0667|consensus

Probab=99.97  E-value=2.8e-30  Score=200.67  Aligned_cols=163  Identities=20%  Similarity=0.240  Sum_probs=143.4

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-C-----cceeeEEeEEecCCccEEEEeeCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-H-----AHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      +|-..+|.|.+|.+..+++.||+|++++...-  ..+...|+.+|..++ |     -|+|+++++|...++++||+|.++
T Consensus       194 LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f--~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL~  271 (586)
T KOG0667|consen  194 LGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF--LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELLS  271 (586)
T ss_pred             ecccccceeEEEEecCCCcEEEEEeeccChHH--HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhhh
Confidence            36678999999999999999999999866443  346778999999985 4     389999999999999999999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec--cCCceEEecccC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS--SDLSVKISLSGL  152 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~--~~~~~ki~dfg~  152 (183)
                       .+|.++++....             .+++...++.++.||+.+|.+||+.+|||+||||+|||+.  ....+||+|||.
T Consensus       272 -~NLYellK~n~f-------------~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGS  337 (586)
T KOG0667|consen  272 -TNLYELLKNNKF-------------RGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGS  337 (586)
T ss_pred             -hhHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccc
Confidence             999999988754             4689999999999999999999999999999999999995  345799999999


Q ss_pred             CCCCCcc--cccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQK--EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~~--~~~~~~~~~~pe~~~~~~~~  179 (183)
                      |......  .|+.+++|+|||++.|-+||
T Consensus       338 Sc~~~q~vytYiQSRfYRAPEVILGlpY~  366 (586)
T KOG0667|consen  338 SCFESQRVYTYIQSRFYRAPEVILGLPYD  366 (586)
T ss_pred             ccccCCcceeeeeccccccchhhccCCCC
Confidence            9866554  67889999999999999984

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=5e-30  Score=193.98  Aligned_cols=163  Identities=18%  Similarity=0.291  Sum_probs=140.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.+|.||++.+..+++.||+|++...  ........+.+|..++..+ +||||+++++.+.+++..+++|||+++++|
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L   83 (329)
T cd05588           4 GRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDL   83 (329)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCH
Confidence            4556789999999999999999999743  2334455688999999888 799999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      ..++....               .+++..++.++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.... 
T Consensus        84 ~~~~~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~  148 (329)
T cd05588          84 MFHMQRQR---------------KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR  148 (329)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc
Confidence            98886553               48999999999999999999999999999999999999999999999999987422 


Q ss_pred             ----cccccceeeeeecccCCCcccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          .....++..|+|||++.+..++
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (329)
T cd05588         149 PGDTTSTFCGTPNYIAPEILRGEDYG  174 (329)
T ss_pred             CCCccccccCCccccCHHHHcCCCCC
Confidence                1245678999999999886653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=6.9e-30  Score=189.55  Aligned_cols=164  Identities=16%  Similarity=0.183  Sum_probs=139.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.||+|.+....  .......+.+|+.+++.++|++++.+.+.+.+++..++++||+++++|.
T Consensus         9 g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~   88 (285)
T cd05631           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLK   88 (285)
T ss_pred             ecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHH
Confidence            45677899999999999999999986432  2223346788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +.+.....             ..+++..+..++.|++.|+.|||+++++||||||+||+++.++.++|+|||++..... 
T Consensus        89 ~~~~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05631          89 FHIYNMGN-------------PGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG  155 (285)
T ss_pred             HHHHhhCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence            88765422             2478899999999999999999999999999999999999999999999999976433 


Q ss_pred             ---ccccceeeeeecccCCCccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~  178 (183)
                         ....++..|+|||++.+..|
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~  178 (285)
T cd05631         156 ETVRGRVGTVGYMAPEVINNEKY  178 (285)
T ss_pred             CeecCCCCCCCccCHhhhcCCCC
Confidence               23457889999999987665

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0032|consensus

Probab=99.97  E-value=8.7e-30  Score=194.13  Aligned_cols=163  Identities=18%  Similarity=0.243  Sum_probs=143.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      +|--.++.|+.|.+..+|+.+|+|.+.+...  ....+.+.+|+.+++.+. ||||+.+.++|++....+++||++.||.
T Consensus        43 lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGe  122 (382)
T KOG0032|consen   43 LGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGE  122 (382)
T ss_pred             hCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCch
Confidence            3566789999999999999999999985433  335568899999999997 9999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc----CCceEEecccCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS----DLSVKISLSGLS  153 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~----~~~~ki~dfg~a  153 (183)
                      |.+.+...                .+++..+..++.|++.++.|||+.|++|||+||+|+|+..    ++.++++|||+|
T Consensus       123 Lfd~i~~~----------------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla  186 (382)
T KOG0032|consen  123 LFDRIVKK----------------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA  186 (382)
T ss_pred             HHHHHHHc----------------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence            99999754                2889999999999999999999999999999999999952    358999999999


Q ss_pred             CCCCcc----cccceeeeeecccCCCcccc
Q psy2674         154 KDTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ......    ..+||+.|+|||++.+.+|+
T Consensus       187 ~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~  216 (382)
T KOG0032|consen  187 KFIKPGERLHTIVGTPEYVAPEVLGGRPYG  216 (382)
T ss_pred             eEccCCceEeeecCCccccCchhhcCCCCC
Confidence            977653    46789999999999987774

>KOG0694|consensus

Probab=99.97  E-value=1.2e-30  Score=203.59  Aligned_cols=163  Identities=19%  Similarity=0.265  Sum_probs=142.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.+|+|+.+....+++.+|+|.+++..  ..++.+....|..++... +||+++.++..|++.++++++|||+.||++
T Consensus       377 GkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm  456 (694)
T KOG0694|consen  377 GRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDL  456 (694)
T ss_pred             ccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcE
Confidence            55678999999999999999999998653  233466788898888887 699999999999999999999999999994


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      .+.. ..+               .+++..++.|+++|+.||+|||++|||+||+|.+|||+|..|.+||+|||+++... 
T Consensus       457 ~~~~-~~~---------------~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~  520 (694)
T KOG0694|consen  457 MHHI-HTD---------------VFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG  520 (694)
T ss_pred             EEEE-ecc---------------cccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCC
Confidence            4333 322               59999999999999999999999999999999999999999999999999999654 


Q ss_pred             ----cccccceeeeeecccCCCccccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                          ....+||+-|+|||++.+..|+.
T Consensus       521 ~g~~TsTfCGTpey~aPEil~e~~Yt~  547 (694)
T KOG0694|consen  521 QGDRTSTFCGTPEFLAPEVLTEQSYTR  547 (694)
T ss_pred             CCCccccccCChhhcChhhhccCcccc
Confidence                34789999999999999988864

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=1.1e-29  Score=192.05  Aligned_cols=162  Identities=19%  Similarity=0.303  Sum_probs=139.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.++.||++.+..+++.+|+|++...  .+......+.+|+.++..+ +||||+++++++.+++..+++|||+++++|
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L   83 (329)
T cd05618           4 GRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL   83 (329)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCH
Confidence            5567889999999999999999998743  2344455678899888777 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+....               .+++..++.++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        84 ~~~~~~~~---------------~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~  148 (329)
T cd05618          84 MFHMQRQR---------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  148 (329)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC
Confidence            88886553               488999999999999999999999999999999999999999999999999875321


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....++..|+|||++.+..+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (329)
T cd05618         149 PGDTTSTFCGTPNYIAPEILRGEDY  173 (329)
T ss_pred             CCCccccccCCccccCHHHHcCCCC
Confidence                 23567899999999987655

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>KOG0577|consensus

Probab=99.97  E-value=7.3e-31  Score=202.58  Aligned_cols=159  Identities=18%  Similarity=0.258  Sum_probs=143.1

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC---CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK---DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      +|+..+|-||.|++..+...||+|++.-+.   ...| ..+..|+..|++++|||++.+.+.|..+.+.|+|||||- |+
T Consensus        34 IGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKW-qDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl-GS  111 (948)
T KOG0577|consen   34 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKW-QDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL-GS  111 (948)
T ss_pred             hcCCccceeEEeeccCccceeeeeeccccccccHHHH-HHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-cc
Confidence            477788889999999999999999998332   2333 368899999999999999999999999999999999998 88


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      -.+++....+              ++.+..+..++.+.+.|+.|||+.+.||||||+.|||++..|.+|++|||.|....
T Consensus       112 AsDlleVhkK--------------plqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~  177 (948)
T KOG0577|consen  112 ASDLLEVHKK--------------PLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA  177 (948)
T ss_pred             HHHHHHHHhc--------------cchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC
Confidence            8898888776              78999999999999999999999999999999999999999999999999998765


Q ss_pred             c-ccccceeeeeecccCCC
Q psy2674         158 Q-KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~-~~~~~~~~~~~pe~~~~  175 (183)
                      + +.++|||+|||||++..
T Consensus       178 PAnsFvGTPywMAPEVILA  196 (948)
T KOG0577|consen  178 PANSFVGTPYWMAPEVILA  196 (948)
T ss_pred             chhcccCCccccchhHhee
Confidence            4 68999999999999864

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=6.1e-30  Score=190.11  Aligned_cols=159  Identities=22%  Similarity=0.307  Sum_probs=135.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..||+|.+...........+.+|+.+++.++||||+++++++.+++..++++||++ ++|.+.
T Consensus        14 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~   92 (288)
T cd07871          14 GEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SDLKQY   92 (288)
T ss_pred             ecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cCHHHH
Confidence            4456788999999999999999998744333334467889999999999999999999999889999999998 699988


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....              .+++..+..++.|++.|+.|||+++++||||||+||+++.++.+||+|||++.....   
T Consensus        93 l~~~~~--------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~  158 (288)
T cd07871          93 LDNCGN--------------LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK  158 (288)
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence            865532              478889999999999999999999999999999999999999999999999874332   


Q ss_pred             --ccccceeeeeecccCCC
Q psy2674         159 --KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~  175 (183)
                        ....++.+|+|||++.+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~  177 (288)
T cd07871         159 TYSNEVVTLWYRPPDVLLG  177 (288)
T ss_pred             cccCceecccccChHHhcC
Confidence              23456889999999865

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.97  E-value=9.5e-30  Score=195.23  Aligned_cols=159  Identities=17%  Similarity=0.170  Sum_probs=136.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..++..+|+|++...  ......+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|.
T Consensus        52 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~  131 (370)
T cd05596          52 GRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLV  131 (370)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHH
Confidence            4456788999999999999999998632  12223345778999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++...                .+++..+..++.|++.||.|||+++++||||||+|||++.++.++|+|||++..... 
T Consensus       132 ~~l~~~----------------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~  195 (370)
T cd05596         132 NLMSNY----------------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN  195 (370)
T ss_pred             HHHHhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence            988653                478888999999999999999999999999999999999999999999999875433 


Q ss_pred             -----ccccceeeeeecccCCCc
Q psy2674         159 -----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~  176 (183)
                           ....+++.|+|||++.+.
T Consensus       196 ~~~~~~~~~gt~~y~aPE~~~~~  218 (370)
T cd05596         196 GMVRCDTAVGTPDYISPEVLKSQ  218 (370)
T ss_pred             CcccCCCCCCCcCeECHHHhccC
Confidence                 234578999999998653

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=1.3e-29  Score=190.95  Aligned_cols=162  Identities=19%  Similarity=0.227  Sum_probs=135.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHH-HHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREID-LFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..+++.+|+|++....  .......+.+|.. +++.++|+||+++.+.+.+.+..+++|||+++++|
T Consensus         4 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   83 (321)
T cd05603           4 GKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGEL   83 (321)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCH
Confidence            55678899999999999999999986432  2222334555554 57788999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+....               .+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++.....
T Consensus        84 ~~~l~~~~---------------~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~  148 (321)
T cd05603          84 FFHLQRER---------------CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE  148 (321)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCC
Confidence            88886543               478889999999999999999999999999999999999999999999999875322


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....+++.|+|||++.+..+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (321)
T cd05603         149 PEETTSTFCGTPEYLAPEVLRKEPY  173 (321)
T ss_pred             CCCccccccCCcccCCHHHhcCCCC
Confidence                 23567899999999887655

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.97  E-value=1.3e-29  Score=190.76  Aligned_cols=162  Identities=17%  Similarity=0.270  Sum_probs=136.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.++.||++.+..+++.||+|.+....  .....+.+..|..++... +||||+++++.+..++..+++|||+++++|
T Consensus         4 G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L   83 (316)
T cd05592           4 GKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDL   83 (316)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcH
Confidence            55678899999999999999999987432  222344556677777655 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+....               .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        84 ~~~~~~~~---------------~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~  148 (316)
T cd05592          84 MFHIQSSG---------------RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMN  148 (316)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCC
Confidence            99887653               488899999999999999999999999999999999999999999999999874322


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....++..|+|||++.+..+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (316)
T cd05592         149 GEGKASTFCGTPDYIAPEILKGQKY  173 (316)
T ss_pred             CCCccccccCCccccCHHHHcCCCC
Confidence                 24567899999999987655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=1.5e-29  Score=190.87  Aligned_cols=162  Identities=19%  Similarity=0.235  Sum_probs=135.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHH-HHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREID-LFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..+++.||+|++....  .......+.+|.. +++.++||||+++++.+.+.+..+++|||+++++|
T Consensus         4 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L   83 (323)
T cd05575           4 GKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGEL   83 (323)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCH
Confidence            55678899999999999999999986332  2222334555554 55778999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+....               .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus        84 ~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~  148 (323)
T cd05575          84 FFHLQRER---------------SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE  148 (323)
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc
Confidence            98887653               488899999999999999999999999999999999999999999999999874322


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....+++.|+|||++.+..+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (323)
T cd05575         149 HSKTTSTFCGTPEYLAPEVLRKQPY  173 (323)
T ss_pred             CCCccccccCChhhcChhhhcCCCC
Confidence                 23457889999999987665

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=1.5e-29  Score=190.78  Aligned_cols=163  Identities=17%  Similarity=0.204  Sum_probs=138.4

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      +|.-.++.||++.+..+++.||+|++....  .....+.+..|.+++..+ +||+|+++++++.+++..+++|||+++++
T Consensus         3 lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   82 (321)
T cd05591           3 LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGD   82 (321)
T ss_pred             cccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCc
Confidence            356678899999999999999999987432  233445677888888866 89999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |...+....               .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++....
T Consensus        83 L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~  147 (321)
T cd05591          83 LMFQIQRSR---------------KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGI  147 (321)
T ss_pred             HHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecc
Confidence            998886553               48889999999999999999999999999999999999999999999999987432


Q ss_pred             c-----ccccceeeeeecccCCCccc
Q psy2674         158 Q-----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~-----~~~~~~~~~~~pe~~~~~~~  178 (183)
                      .     ....++..|+|||++.+..|
T Consensus       148 ~~~~~~~~~~gt~~y~aPE~~~~~~~  173 (321)
T cd05591         148 LNGVTTTTFCGTPDYIAPEILQELEY  173 (321)
T ss_pred             cCCccccccccCccccCHHHHcCCCC
Confidence            2     23457889999999887655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.97  E-value=1.2e-29  Score=193.59  Aligned_cols=154  Identities=21%  Similarity=0.240  Sum_probs=134.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.||+|++...........+.+|+++++.++|+||+++++++.+.+.+++++||+++++|.+.
T Consensus        83 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  162 (353)
T PLN00034         83 GSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT  162 (353)
T ss_pred             cCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCccccc
Confidence            55678899999999999999999997655566667889999999999999999999999999999999999999988542


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      .                   ...+..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++.....   
T Consensus       163 ~-------------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~  223 (353)
T PLN00034        163 H-------------------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD  223 (353)
T ss_pred             c-------------------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc
Confidence            2                   356677888999999999999999999999999999999999999999999975432   


Q ss_pred             --ccccceeeeeecccCC
Q psy2674         159 --KEYYKYRWVICSNIAE  174 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~  174 (183)
                        ....++..|+|||++.
T Consensus       224 ~~~~~~gt~~y~aPE~~~  241 (353)
T PLN00034        224 PCNSSVGTIAYMSPERIN  241 (353)
T ss_pred             cccccccCccccCccccc
Confidence              2356789999999874

>KOG0033|consensus

Probab=99.97  E-value=2.6e-31  Score=185.86  Aligned_cols=161  Identities=16%  Similarity=0.203  Sum_probs=137.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--+++.|++|.+..+|+.+|+|+++.. -.....+.+.+|+.+.++++||||+++.+.....+..|+++|.++|++|-.
T Consensus        20 gkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~   99 (355)
T KOG0033|consen   20 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE   99 (355)
T ss_pred             ccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHH
Confidence            3346778899999999999999999832 233355689999999999999999999999999999999999999999864


Q ss_pred             H-HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec---cCCceEEecccCCCCC
Q psy2674          81 F-LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDLSVKISLSGLSKDT  156 (183)
Q Consensus        81 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~---~~~~~ki~dfg~a~~~  156 (183)
                      - ..+.                ..++..+..++.||+.++.|||.++|||||+||.|+++-   ...-+|++|||+|...
T Consensus       100 eIV~R~----------------~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l  163 (355)
T KOG0033|consen  100 DIVARE----------------FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV  163 (355)
T ss_pred             HHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEe
Confidence            4 4443                478899999999999999999999999999999999994   4566999999999877


Q ss_pred             Ccc----cccceeeeeecccCCCccc
Q psy2674         157 YQK----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...    +..||+.|++||++...||
T Consensus       164 ~~g~~~~G~~GtP~fmaPEvvrkdpy  189 (355)
T KOG0033|consen  164 NDGEAWHGFAGTPGYLSPEVLKKDPY  189 (355)
T ss_pred             CCccccccccCCCcccCHHHhhcCCC
Confidence            654    4677999999999986555

>KOG0580|consensus

Probab=99.97  E-value=6.3e-31  Score=182.81  Aligned_cols=166  Identities=25%  Similarity=0.317  Sum_probs=145.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |-.-+++||.++...++-.||+|++.++-  .....+++.+|+++...++||||++++++|.+....|+++||...|++.
T Consensus        31 gkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~  110 (281)
T KOG0580|consen   31 GKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELY  110 (281)
T ss_pred             cCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHH
Confidence            44567899999999999999999987432  1223357889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ..+.....             ..+++...+.++.|++.|+.|||..+++||||||.|+|++..+..|++|||-+.....+
T Consensus       111 k~L~~~~~-------------~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~  177 (281)
T KOG0580|consen  111 KDLQEGRM-------------KRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN  177 (281)
T ss_pred             HHHHhccc-------------ccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence            99984322             24889999999999999999999999999999999999999999999999999876543


Q ss_pred             ---cccceeeeeecccCCCccccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~~~  180 (183)
                         ..+||.-|.|||+..|..+|-
T Consensus       178 kR~tlcgt~dyl~pEmv~~~~hd~  201 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEGRGHDK  201 (281)
T ss_pred             CceeeecccccCCHhhcCCCCccc
Confidence               578999999999999988763

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=2.7e-29  Score=185.92  Aligned_cols=168  Identities=17%  Similarity=0.234  Sum_probs=140.4

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|--.++.||.+.+..+++.+|+|.+....  .....+.+..|+++++.++|+||+++.+++..++..+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            356678899999999999999999986432  222335678899999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+.....           ....+++..++.++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~~~~~~~~~-----------~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~  149 (280)
T cd05608          81 RYHIYNVDE-----------ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKD  149 (280)
T ss_pred             HHHHHhccc-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCC
Confidence            888754321           112588999999999999999999999999999999999999999999999999875433


Q ss_pred             c-----cccceeeeeecccCCCcccc
Q psy2674         159 K-----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ~-----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .     ...+++.|+|||++.+..++
T Consensus       150 ~~~~~~~~~g~~~y~aPE~~~~~~~~  175 (280)
T cd05608         150 GQSKTKGYAGTPGFMAPELLQGEEYD  175 (280)
T ss_pred             CCccccccCCCcCccCHHHhcCCCCC
Confidence            2     34678899999999876653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=1.2e-29  Score=191.31  Aligned_cols=162  Identities=16%  Similarity=0.210  Sum_probs=138.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.++.||++.+..+++.||+|++....  .....+.+.+|..++... +||||+++++++.+.+..+++|||+++++|
T Consensus         4 g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L   83 (320)
T cd05590           4 GKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDL   83 (320)
T ss_pred             eeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchH
Confidence            55678899999999999999999986321  223345677888888876 799999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        84 ~~~i~~~~---------------~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~  148 (320)
T cd05590          84 MFHIQKSR---------------RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF  148 (320)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc
Confidence            98887653               488999999999999999999999999999999999999999999999999875322


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....+++.|+|||++.+..+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (320)
T cd05590         149 NGKTTSTFCGTPDYIAPEILQEMLY  173 (320)
T ss_pred             CCCcccccccCccccCHHHHcCCCC
Confidence                 23567899999999887655

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=1.4e-29  Score=191.49  Aligned_cols=160  Identities=17%  Similarity=0.182  Sum_probs=138.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.+|+|.+....  .......+.+|+.+++.++|+||+++.+.+.+.+..+++|||+++++|.
T Consensus        10 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   89 (330)
T cd05601          10 GRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLL   89 (330)
T ss_pred             EeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHH
Confidence            44567899999999999999999987432  2334557889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .+++..+..++.|++.||.+||+++++||||||+||+++.++.++|+|||++......
T Consensus        90 ~~l~~~~~--------------~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          90 SLLNRYED--------------QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             HHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence            99977532              5889999999999999999999999999999999999999999999999999755432


Q ss_pred             ------cccceeeeeecccCCC
Q psy2674         160 ------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~~  175 (183)
                            ...+++.|+|||++.+
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~  177 (330)
T cd05601         156 KMVNSKLPVGTPDYIAPEVLTT  177 (330)
T ss_pred             CceeeecccCCccccCHHHhcc
Confidence                  2356889999999863

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=1.9e-29  Score=190.51  Aligned_cols=162  Identities=17%  Similarity=0.211  Sum_probs=135.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHH-HHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREID-LFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..+++.+|+|++....  .......+.+|.. +++.++||||+++++.+..++..+++|||+++++|
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L   83 (325)
T cd05604           4 GKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGEL   83 (325)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCH
Confidence            55678899999999999999999986432  2223335555555 46778999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+....               .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus        84 ~~~l~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~  148 (325)
T cd05604          84 FFHLQRER---------------SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA  148 (325)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCC
Confidence            88886543               488999999999999999999999999999999999999999999999999874322


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....++..|+|||++.+..+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (325)
T cd05604         149 QSDTTTTFCGTPEYLAPEVIRKQPY  173 (325)
T ss_pred             CCCCcccccCChhhCCHHHHcCCCC
Confidence                 23567889999999887655

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=7.5e-30  Score=194.28  Aligned_cols=162  Identities=22%  Similarity=0.287  Sum_probs=140.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++....  .......+.+|+++++.++|+||+++++.+.+++..+++|||+++++|.
T Consensus        10 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   89 (350)
T cd05573          10 GRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLM   89 (350)
T ss_pred             EeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHH
Confidence            45567889999999999999999987332  2234457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+....               .+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus        90 ~~l~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  154 (350)
T cd05573          90 NLLIRKD---------------VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA  154 (350)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence            9997653               4889999999999999999999999999999999999999999999999998754332


Q ss_pred             ----------------------------------cccceeeeeecccCCCccc
Q psy2674         160 ----------------------------------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----------------------------------~~~~~~~~~~pe~~~~~~~  178 (183)
                                                        ...+++.|+|||++.+..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  207 (350)
T cd05573         155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPY  207 (350)
T ss_pred             CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCC
Confidence                                              2457889999999987654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=1.3e-29  Score=189.57  Aligned_cols=160  Identities=21%  Similarity=0.275  Sum_probs=135.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.+|+|++...........+.+|+.+++.++||||+++.+++.+++..++++||++ ++|.+.
T Consensus        14 g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~~   92 (303)
T cd07869          14 GEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVH-TDLCQY   92 (303)
T ss_pred             EecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCC-cCHHHH
Confidence            4456788999999999999999998744333333467789999999999999999999999999999999997 788887


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....              .+++..+..++.|++.|+.|||+++++||||||+||+++.++.+||+|||++.....   
T Consensus        93 ~~~~~~--------------~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  158 (303)
T cd07869          93 MDKHPG--------------GLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH  158 (303)
T ss_pred             HHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc
Confidence            765432              478889999999999999999999999999999999999999999999999874322   


Q ss_pred             --ccccceeeeeecccCCCc
Q psy2674         159 --KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~  176 (183)
                        ....++.+|+|||++.+.
T Consensus       159 ~~~~~~~~~~y~aPE~~~~~  178 (303)
T cd07869         159 TYSNEVVTLWYRPPDVLLGS  178 (303)
T ss_pred             cCCCCcccCCCCChHHHcCC
Confidence              234568899999998653

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.96  E-value=2e-29  Score=190.39  Aligned_cols=162  Identities=17%  Similarity=0.210  Sum_probs=134.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHH-HHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREI-DLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |...++.||++.+..+++.+|+|++....  .......+.+|. .+++.++|+||+++++.+.+++..+++|||+++++|
T Consensus         4 g~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L   83 (325)
T cd05602           4 GKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL   83 (325)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcH
Confidence            55678899999999999999999987432  111222444444 456778999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.+....               .+.+..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....
T Consensus        84 ~~~~~~~~---------------~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~  148 (325)
T cd05602          84 FYHLQRER---------------CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE  148 (325)
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCccccc
Confidence            99887653               477888889999999999999999999999999999999999999999999874322


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....+++.|+|||++.+..+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (325)
T cd05602         149 HNGTTSTFCGTPEYLAPEVLHKQPY  173 (325)
T ss_pred             CCCCcccccCCccccCHHHHcCCCC
Confidence                 23567899999999887655

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=2.5e-29  Score=189.66  Aligned_cols=162  Identities=19%  Similarity=0.280  Sum_probs=135.4

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCC---CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHS---KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |-..++.||++..   ..+++.||+|++...   .+......+.+|+++++.++||||+++++.+.+++..+++|||+++
T Consensus         5 g~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   84 (323)
T cd05584           5 GKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSG   84 (323)
T ss_pred             eecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCC
Confidence            4556778887765   457899999998642   2223345678899999999999999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+...+               .+.+..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++.
T Consensus        85 ~~L~~~~~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~  149 (323)
T cd05584          85 GELFMHLEREG---------------IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKE  149 (323)
T ss_pred             chHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCee
Confidence            99999887653               477888899999999999999999999999999999999999999999999874


Q ss_pred             CCc-----ccccceeeeeecccCCCccc
Q psy2674         156 TYQ-----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~-----~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...     ....++..|+|||++.+..+
T Consensus       150 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~  177 (323)
T cd05584         150 SIHEGTVTHTFCGTIEYMAPEILMRSGH  177 (323)
T ss_pred             cccCCCcccccCCCccccChhhccCCCC
Confidence            322     23467889999999876543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.96  E-value=4.8e-29  Score=188.73  Aligned_cols=163  Identities=16%  Similarity=0.218  Sum_probs=143.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..+|+|.+...........+.+|+++++.++|+||+++++++.+++..+++|||+++++|.++
T Consensus        14 g~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~   93 (331)
T cd06649          14 GAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV   93 (331)
T ss_pred             cCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHH
Confidence            45567889999999999999999998655555667899999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      +....               .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++|+|||++.....  
T Consensus        94 l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  158 (331)
T cd06649          94 LKEAK---------------RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  158 (331)
T ss_pred             HHHcC---------------CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc
Confidence            87653               478899999999999999999986 699999999999999999999999999875433  


Q ss_pred             -ccccceeeeeecccCCCcccc
Q psy2674         159 -KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~~~  179 (183)
                       ....++..|+|||++.+..++
T Consensus       159 ~~~~~g~~~y~aPE~~~~~~~~  180 (331)
T cd06649         159 ANSFVGTRSYMSPERLQGTHYS  180 (331)
T ss_pred             cccCCCCcCcCCHhHhcCCCCC
Confidence             245678899999999886653

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.96  E-value=2.5e-29  Score=190.03  Aligned_cols=163  Identities=19%  Similarity=0.295  Sum_probs=140.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.++.||++....+++.+|+|++....  .....+.+.+|+.++..+ +|++|+.+++.+.+.+..+++|||+++++|
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   83 (327)
T cd05617           4 GRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDL   83 (327)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcH
Confidence            55678899999999999999999997432  334456788999999888 799999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      ...+....               .+++..++.++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.... 
T Consensus        84 ~~~~~~~~---------------~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~  148 (327)
T cd05617          84 MFHMQRQR---------------KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG  148 (327)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccC
Confidence            98886543               48899999999999999999999999999999999999999999999999987432 


Q ss_pred             ----cccccceeeeeecccCCCcccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          .....+++.|+|||++.+..|+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~~  174 (327)
T cd05617         149 PGDTTSTFCGTPNYIAPEILRGEEYG  174 (327)
T ss_pred             CCCceecccCCcccCCHHHHCCCCCC
Confidence                1235678999999999876653

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG4236|consensus

Probab=99.96  E-value=1e-29  Score=194.28  Aligned_cols=163  Identities=14%  Similarity=0.199  Sum_probs=139.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC-HH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD-LK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~-L~   79 (183)
                      |.--++.||-+.+..+|+.||||++.+.+ .....+++.+|+.+|+.+.||.|+.+.-.|+.++.++++||-+- |+ |.
T Consensus       573 GSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GDMLE  651 (888)
T KOG4236|consen  573 GSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GDMLE  651 (888)
T ss_pred             cCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-chHHH
Confidence            44557788888999999999999998554 22233578999999999999999999999999999999999997 55 55


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec---cCCceEEecccCCCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDLSVKISLSGLSKDT  156 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~---~~~~~ki~dfg~a~~~  156 (183)
                      ..++....              .+++.....+..||+.|++|||.++|+|+|+||+|||+.   +...+||+|||+|+.+
T Consensus       652 MILSsEkg--------------RL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI  717 (888)
T KOG4236|consen  652 MILSSEKG--------------RLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII  717 (888)
T ss_pred             HHHHhhcc--------------cchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence            55555432              699999999999999999999999999999999999994   4577999999999988


Q ss_pred             Ccc----cccceeeeeecccCCCcccc
Q psy2674         157 YQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       157 ~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...    ...||+.|.|||+++++.|+
T Consensus       718 gEksFRrsVVGTPAYLaPEVLrnkGyN  744 (888)
T KOG4236|consen  718 GEKSFRRSVVGTPAYLAPEVLRNKGYN  744 (888)
T ss_pred             chhhhhhhhcCCccccCHHHHhhcccc
Confidence            765    56789999999999998874

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.9e-29  Score=190.99  Aligned_cols=159  Identities=16%  Similarity=0.158  Sum_probs=136.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||.+.+..+++.||+|++...  ......+.+.+|+.+++.++|+||+.+++++.+++..+++|||+++++|.
T Consensus        10 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~   89 (331)
T cd05597          10 GRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLL   89 (331)
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHH
Confidence            4456788999999999999999998632  12223456788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++......
T Consensus        90 ~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~  155 (331)
T cd05597          90 TLLSKFED--------------RLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD  155 (331)
T ss_pred             HHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence            99976432              5889999999999999999999999999999999999999999999999998754332


Q ss_pred             ------cccceeeeeecccCC
Q psy2674         160 ------EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~  174 (183)
                            ...+++.|+|||++.
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~  176 (331)
T cd05597         156 GTVQSNVAVGTPDYISPEILQ  176 (331)
T ss_pred             CCccccceeccccccCHHHHh
Confidence                  235788999999986

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.96  E-value=2.2e-29  Score=193.22  Aligned_cols=159  Identities=18%  Similarity=0.171  Sum_probs=136.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.+|+|++...  ........+.+|+.+++.++||||+++++.+.+++..+++|||+++++|.
T Consensus        52 G~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~  131 (371)
T cd05622          52 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV  131 (371)
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHH
Confidence            4456788999999999999999998632  12233446778999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++...                .+++..+..++.|++.||+|||+++++||||||+||+++.++.++|+|||++..... 
T Consensus       132 ~~~~~~----------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~  195 (371)
T cd05622         132 NLMSNY----------------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE  195 (371)
T ss_pred             HHHHhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence            988653                478888999999999999999999999999999999999999999999999975432 


Q ss_pred             -----ccccceeeeeecccCCCc
Q psy2674         159 -----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~  176 (183)
                           ....+|+.|+|||++.+.
T Consensus       196 ~~~~~~~~~gt~~y~aPE~l~~~  218 (371)
T cd05622         196 GMVRCDTAVGTPDYISPEVLKSQ  218 (371)
T ss_pred             CcccccCcccCccccCHHHHhcc
Confidence                 245678999999998653

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=5.2e-29  Score=188.93  Aligned_cols=177  Identities=23%  Similarity=0.362  Sum_probs=135.4

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC-CccEEEEeeCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG-DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~~~~lv~e~~~   74 (183)
                      |.-.++.||++.     ...++..||+|++...........+.+|+.+++.+ +||||+++++++..+ +.++++|||++
T Consensus        16 G~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~   95 (338)
T cd05102          16 GHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCK   95 (338)
T ss_pred             ccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCC
Confidence            445667777764     34567899999998655555566789999999999 899999999998764 46889999999


Q ss_pred             CCCHHHHHHhhccCCCCC-----------------------------------------------CCCCCCCCCCCCHHH
Q psy2674          75 WGDLKQFLLATRKDSKDK-----------------------------------------------SGSGKPRVRSLSTSQ  107 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~  107 (183)
                      +|+|.+++..........                                               ..........+++..
T Consensus        96 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  175 (338)
T cd05102          96 YGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMED  175 (338)
T ss_pred             CCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHH
Confidence            999999987542110000                                               000001123578888


Q ss_pred             HHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-------cccceeeeeecccCCCccc
Q psy2674         108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       108 ~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      +..++.|++.|+.|||+++++||||||.||+++.++.++|+|||+++.....       ...++..|+|||++.+..|
T Consensus       176 ~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  253 (338)
T cd05102         176 LICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVY  253 (338)
T ss_pred             HHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCC
Confidence            9999999999999999999999999999999999999999999999854332       1223467999999877655

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.96  E-value=2.4e-29  Score=189.23  Aligned_cols=162  Identities=16%  Similarity=0.216  Sum_probs=136.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.++.||++.+..++..||+|.+....  .......+..|..++... +|++|+++++.+.+.+..+++|||+.+++|
T Consensus         4 g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L   83 (316)
T cd05620           4 GKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDL   83 (316)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcH
Confidence            45678899999999999999999987431  122334567778777755 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      ...+....               .+++..+..++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.... 
T Consensus        84 ~~~i~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~  148 (316)
T cd05620          84 MFHIQDKG---------------RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF  148 (316)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeeccc
Confidence            98886653               47889999999999999999999999999999999999999999999999987432 


Q ss_pred             ----cccccceeeeeecccCCCccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~  178 (183)
                          .....++..|+|||++.+..+
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (316)
T cd05620         149 GDNRASTFCGTPDYIAPEILQGLKY  173 (316)
T ss_pred             CCCceeccCCCcCccCHHHHcCCCC
Confidence                224567899999999987665

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.96  E-value=2.9e-29  Score=188.92  Aligned_cols=162  Identities=19%  Similarity=0.257  Sum_probs=135.3

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |--.++.||++.+   ..++..+|+|++.... .......+.+|+++++.++||||+++++.+.+++..++++||+++++
T Consensus         5 g~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~   84 (318)
T cd05582           5 GQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGD   84 (318)
T ss_pred             eeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCc
Confidence            4455677876654   4688999999987432 22234467789999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+....               .+++..++.++.|++.||.|||+++++||||+|+||+++.++.++|+|||++....
T Consensus        85 L~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~  149 (318)
T cd05582          85 LFTRLSKEV---------------MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI  149 (318)
T ss_pred             HHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccC
Confidence            999886543               48899999999999999999999999999999999999999999999999987543


Q ss_pred             cc-----cccceeeeeecccCCCccc
Q psy2674         158 QK-----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~-----~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..     ...++..|+|||++.+..+
T Consensus       150 ~~~~~~~~~~g~~~y~aPE~~~~~~~  175 (318)
T cd05582         150 DHEKKAYSFCGTVEYMAPEVVNRRGH  175 (318)
T ss_pred             CCCCceecccCChhhcCHHHHcCCCC
Confidence            32     3457889999999876543

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG4250|consensus

Probab=99.96  E-value=5.6e-30  Score=200.47  Aligned_cols=167  Identities=16%  Similarity=0.272  Sum_probs=144.4

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYTD   74 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~   74 (183)
                      +|--++|.||+.++..+|+.||||.+.+......++++.+|++++++++|+|||+++++=++..      ...++||||.
T Consensus        21 LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~  100 (732)
T KOG4250|consen   21 LGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCS  100 (732)
T ss_pred             hcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecC
Confidence            4677899999999999999999999997666666778999999999999999999999865433      4679999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec----cCCceEEecc
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS----SDLSVKISLS  150 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~----~~~~~ki~df  150 (183)
                      ||+|...+.+....            .++++...+.+..+++.|+.|||.+||+||||||.||++-    .....||+||
T Consensus       101 gGsL~~~L~~PEN~------------~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDf  168 (732)
T KOG4250|consen  101 GGSLRKVLNSPENA------------YGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDF  168 (732)
T ss_pred             CCcHHHHhcCcccc------------cCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecc
Confidence            99999999765322            3699999999999999999999999999999999999983    3345899999


Q ss_pred             cCCCCCCcc----cccceeeeeecccCCC-cccc
Q psy2674         151 GLSKDTYQK----EYYKYRWVICSNIAEG-RRLN  179 (183)
Q Consensus       151 g~a~~~~~~----~~~~~~~~~~pe~~~~-~~~~  179 (183)
                      |.|+....+    ..+||+.|.+||+... +.|+
T Consensus       169 G~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~  202 (732)
T KOG4250|consen  169 GAARELDDNSLFTSLVGTEEYLHPELYERQKKYT  202 (732)
T ss_pred             cccccCCCCCeeeeecCchhhcChHHHhhccCcC
Confidence            999988776    4678999999999984 5553

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.96  E-value=5.9e-29  Score=196.50  Aligned_cols=164  Identities=20%  Similarity=0.327  Sum_probs=136.7

Q ss_pred             CCCCceeeeccCCCC-cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           3 LIPNARGLKASDPQD-TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      .-.++.+|.+....+ +..|++|.+... +......+.+|+.+++.++||||+++++.+..++..+++|||+++++|.+.
T Consensus        77 ~G~~g~vy~a~~~~~~~~~vv~K~~~~~-~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~  155 (478)
T PTZ00267         77 RNPTTAAFVATRGSDPKEKVVAKFVMLN-DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQ  155 (478)
T ss_pred             eCCCcEEEEEEEcCCCCeEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHH
Confidence            345677888888777 788888876533 334445678899999999999999999999999999999999999999988


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....           ....+++..+..++.|++.||.+||+++++||||||.||+++.++.++|+|||++.....   
T Consensus       156 l~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~  224 (478)
T PTZ00267        156 IKQRLK-----------EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS  224 (478)
T ss_pred             HHHHHh-----------ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence            765321           112578889999999999999999999999999999999999999999999999985432   


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....+|+.|+|||++.+..+
T Consensus       225 ~~~~~~~~gt~~y~aPE~~~~~~~  248 (478)
T PTZ00267        225 LDVASSFCGTPYYLAPELWERKRY  248 (478)
T ss_pred             cccccccCCCccccCHhHhCCCCC
Confidence                23457899999999987665

>KOG0201|consensus

Probab=99.96  E-value=4.6e-31  Score=196.83  Aligned_cols=164  Identities=18%  Similarity=0.309  Sum_probs=148.4

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      .|.-.+++||++.+..+++.||+|++.........+.+++|+.++..++++||.++++.+..+..+|++|||+.||++.+
T Consensus        21 IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~  100 (467)
T KOG0201|consen   21 IGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLD  100 (467)
T ss_pred             ccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhh
Confidence            36678899999999999999999999977666667789999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      .+....               .+.+.....++.+++.|+.|+|.++.+|||||+.||++...+.+|++|||.+.....  
T Consensus       101 lL~~~~---------------~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~  165 (467)
T KOG0201|consen  101 LLKSGN---------------ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV  165 (467)
T ss_pred             hhccCC---------------CCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechh
Confidence            997663               347788888899999999999999999999999999999999999999999986543  


Q ss_pred             ---ccccceeeeeecccCCCcccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~~  179 (183)
                         +.+.||++|||||++.+..||
T Consensus       166 ~rr~tfvGTPfwMAPEVI~~~~Y~  189 (467)
T KOG0201|consen  166 KRRKTFVGTPFWMAPEVIKQSGYD  189 (467)
T ss_pred             hccccccccccccchhhhcccccc
Confidence               468899999999999987775

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.96  E-value=1.9e-28  Score=183.30  Aligned_cols=177  Identities=23%  Similarity=0.402  Sum_probs=137.8

Q ss_pred             CCCCCceeeeccC----------------CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc
Q psy2674           2 SLIPNARGLKASD----------------PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP   65 (183)
Q Consensus         2 ~~~~~~~~~~~~~----------------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   65 (183)
                      |.-.++.||++..                ..++..||+|.+...........+.+|++++..++||||+++++++.+.+.
T Consensus        14 g~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   93 (304)
T cd05096          14 GEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDP   93 (304)
T ss_pred             cccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCc
Confidence            4455677777653                234568999999866566666789999999999999999999999999999


Q ss_pred             cEEEEeeCCCCCHHHHHHhhccCCCCCC----CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc
Q psy2674          66 HYLLLEYTDWGDLKQFLLATRKDSKDKS----GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS  141 (183)
Q Consensus        66 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~  141 (183)
                      .++++||+++++|.+++...........    .........+++...+.++.|++.|+.|||+.+++|+||||+||+++.
T Consensus        94 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~  173 (304)
T cd05096          94 LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGE  173 (304)
T ss_pred             eEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcC
Confidence            9999999999999999866432111100    001122235778889999999999999999999999999999999999


Q ss_pred             CCceEEecccCCCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         142 DLSVKISLSGLSKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       142 ~~~~ki~dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ++.+||+|||+++......       ..++..|+|||++.+..+
T Consensus       174 ~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  217 (304)
T cd05096         174 NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKF  217 (304)
T ss_pred             CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCC
Confidence            9999999999998543322       223567999999876554

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.96  E-value=5.1e-29  Score=188.05  Aligned_cols=162  Identities=17%  Similarity=0.231  Sum_probs=137.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCC-cceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..+++.||+|++...  ......+.+..|..+++.++| ++|+.+.+.+.+.+..+++|||+++++|
T Consensus         9 g~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L   88 (324)
T cd05587           9 GKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL   88 (324)
T ss_pred             eeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcH
Confidence            4567789999999999999999998742  123345577889999999965 5688899999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      .+.+....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++.... 
T Consensus        89 ~~~~~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~  153 (324)
T cd05587          89 MYHIQQVG---------------KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIF  153 (324)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence            99887653               47889999999999999999999999999999999999999999999999987432 


Q ss_pred             ----cccccceeeeeecccCCCccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~  178 (183)
                          .....++..|+|||++.+.++
T Consensus       154 ~~~~~~~~~gt~~y~aPE~~~~~~~  178 (324)
T cd05587         154 GGKTTRTFCGTPDYIAPEIIAYQPY  178 (324)
T ss_pred             CCCceeeecCCccccChhhhcCCCC
Confidence                123467899999999988765

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.96  E-value=2.3e-28  Score=178.16  Aligned_cols=163  Identities=24%  Similarity=0.362  Sum_probs=138.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++....++..+|+|.+......+....+.+|+++++.++|+||+++.+++.+.+..++++||+++++|.++
T Consensus         4 g~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   83 (252)
T cd05084           4 GRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTF   83 (252)
T ss_pred             CcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHH
Confidence            45567889999999999999999987555555566889999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY  161 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~  161 (183)
                      +.....              .+++..++.++.|++.++.|||+++++|+||+|+||+++.++.++++|||++........
T Consensus        84 ~~~~~~--------------~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  149 (252)
T cd05084          84 LRTEGP--------------RLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY  149 (252)
T ss_pred             HHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccc
Confidence            865432              478899999999999999999999999999999999999999999999999875433211


Q ss_pred             -------cceeeeeecccCCCccc
Q psy2674         162 -------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       162 -------~~~~~~~~pe~~~~~~~  178 (183)
                             ..+..|+|||.+.+..+
T Consensus       150 ~~~~~~~~~~~~y~aPE~~~~~~~  173 (252)
T cd05084         150 ASTGGMKQIPVKWTAPEALNYGRY  173 (252)
T ss_pred             cccCCCCCCceeecCchhhcCCCC
Confidence                   11345999999877654

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.96  E-value=9.6e-29  Score=187.26  Aligned_cols=162  Identities=17%  Similarity=0.223  Sum_probs=141.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..+|+|.+...........+.+|+++++.++|+||+++++++.+++..+++|||+.+++|.++
T Consensus        14 g~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~   93 (333)
T cd06650          14 GAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV   93 (333)
T ss_pred             cCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHH
Confidence            55677889999999999999999987655555566889999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      +...+               .+++..+..++.+++.++.|||+. +++|+||||+||+++.++.++|+|||++.....  
T Consensus        94 l~~~~---------------~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~  158 (333)
T cd06650          94 LKKAG---------------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  158 (333)
T ss_pred             HHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc
Confidence            97653               478889999999999999999975 799999999999999999999999999875433  


Q ss_pred             -ccccceeeeeecccCCCccc
Q psy2674         159 -KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~~  178 (183)
                       ....++..|+|||++.+..+
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~  179 (333)
T cd06650         159 ANSFVGTRSYMSPERLQGTHY  179 (333)
T ss_pred             cccCCCCccccCHHHhcCCCC
Confidence             34567889999999987654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0194|consensus

Probab=99.96  E-value=6.8e-29  Score=191.20  Aligned_cols=162  Identities=30%  Similarity=0.418  Sum_probs=134.8

Q ss_pred             CCCCCceeeeccCCCCc----ceEEEeeccC--CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDT----SVLMAKSLVH--SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~----~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |-.+++.|+++.-...+    .+||+|....  ....++...+.+|++++++++||||++++|++.++.+++++||+|.|
T Consensus       166 GeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~g  245 (474)
T KOG0194|consen  166 GEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNG  245 (474)
T ss_pred             ecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCC
Confidence            55667777766654432    2389999874  35577788999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      |+|.+++...+.              .++......++.+.+.||+|||+++++||||.++|+|++.++.+||+|||+++.
T Consensus       246 GsL~~~L~k~~~--------------~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~  311 (474)
T KOG0194|consen  246 GSLDDYLKKNKK--------------SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRA  311 (474)
T ss_pred             CcHHHHHHhCCC--------------CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence            999999988753              488999999999999999999999999999999999999999999999999986


Q ss_pred             CCcc------cccceeeeeecccCCCccc
Q psy2674         156 TYQK------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~~------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....      ...+++| .|||.+....|
T Consensus       312 ~~~~~~~~~~~klPirW-LAPEtl~~~~~  339 (474)
T KOG0194|consen  312 GSQYVMKKFLKKLPIRW-LAPETLNTGIF  339 (474)
T ss_pred             CcceeeccccccCccee-cChhhhccCcc
Confidence            6421      1233454 56888765444

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.8e-29  Score=187.47  Aligned_cols=161  Identities=14%  Similarity=0.203  Sum_probs=133.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC---CCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL---DHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      +|--.++.||++.+..+++.||+|++....  ..........|..++...   .||+|+.+++.+.+++..+++|||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            366678899999999999999999986321  122233455666666554   699999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|...+....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++..
T Consensus        81 g~L~~~l~~~~---------------~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~  145 (330)
T cd05586          81 GELFWHLQKEG---------------RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKA  145 (330)
T ss_pred             ChHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcC
Confidence            99998887653               488999999999999999999999999999999999999999999999999875


Q ss_pred             CCc-----ccccceeeeeecccCCCc
Q psy2674         156 TYQ-----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       156 ~~~-----~~~~~~~~~~~pe~~~~~  176 (183)
                      ...     ....++..|+|||++.+.
T Consensus       146 ~~~~~~~~~~~~gt~~y~aPE~~~~~  171 (330)
T cd05586         146 NLTDNKTTNTFCGTTEYLAPEVLLDE  171 (330)
T ss_pred             CCCCCCCccCccCCccccCHHHHcCC
Confidence            322     245678999999998653

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.96  E-value=5e-29  Score=187.56  Aligned_cols=162  Identities=17%  Similarity=0.233  Sum_probs=136.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.++.||++.+..+++.||+|++....  ..........|..++... +||||+++++++.+.+..+++|||+++++|
T Consensus         4 G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L   83 (316)
T cd05619           4 GKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDL   83 (316)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcH
Confidence            55678899999999999999999987431  122234566777777765 999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+....               .+++..+..++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        84 ~~~l~~~~---------------~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~  148 (316)
T cd05619          84 MFHIQSCH---------------KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENML  148 (316)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCC
Confidence            99987653               478889999999999999999999999999999999999999999999999874321


Q ss_pred             -----ccccceeeeeecccCCCccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~  178 (183)
                           ....++..|+|||++.+..|
T Consensus       149 ~~~~~~~~~gt~~y~aPE~~~~~~~  173 (316)
T cd05619         149 GDAKTCTFCGTPDYIAPEILLGQKY  173 (316)
T ss_pred             CCCceeeecCCccccCHHHHcCCCC
Confidence                 23557889999999987665

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=6.4e-29  Score=191.75  Aligned_cols=155  Identities=15%  Similarity=0.168  Sum_probs=134.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||+|.+..+++.||+|...       ...+.+|+++++.++||||+++++++......++++|++. ++|..+
T Consensus       101 g~G~~g~V~~~~d~~~~~~vaiK~~~-------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~  172 (391)
T PHA03212        101 TPGAEGFAFACIDNKTCEHVVIKAGQ-------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCY  172 (391)
T ss_pred             cCCCCeEEEEEEECCCCCEEEEechh-------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHH
Confidence            45677889999999999999999753       2356789999999999999999999999999999999986 788888


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +....               .+++..++.++.|++.||.|||+++|+||||||+||+++..+.++|+|||+|.....   
T Consensus       173 l~~~~---------------~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~  237 (391)
T PHA03212        173 LAAKR---------------NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA  237 (391)
T ss_pred             HHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence            76543               478889999999999999999999999999999999999999999999999864321   


Q ss_pred             ---ccccceeeeeecccCCCcccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~~  179 (183)
                         ....+|+.|+|||++.+.+|+
T Consensus       238 ~~~~~~~gt~~y~aPE~~~~~~~~  261 (391)
T PHA03212        238 NKYYGWAGTIATNAPELLARDPYG  261 (391)
T ss_pred             cccccccCccCCCChhhhcCCCCC
Confidence               135679999999999876654

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.96  E-value=3.6e-29  Score=185.66  Aligned_cols=162  Identities=19%  Similarity=0.311  Sum_probs=136.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.+|+|.+.... .....+.+.+|+++++.++|+||+++.+.+..++..+++|||++++.+..
T Consensus        10 g~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~   89 (287)
T cd07848          10 GEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLEL   89 (287)
T ss_pred             cccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHH
Confidence            45567889999999999999999987432 33345577899999999999999999999999999999999999766654


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ... ..              ..+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||++...... 
T Consensus        90 ~~~-~~--------------~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~  154 (287)
T cd07848          90 LEE-MP--------------NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS  154 (287)
T ss_pred             HHh-cC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence            432 22              14888999999999999999999999999999999999999999999999999864322 


Q ss_pred             -----cccceeeeeecccCCCccc
Q psy2674         160 -----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~~~  178 (183)
                           ...++..|+|||++.+..+
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~  178 (287)
T cd07848         155 NANYTEYVATRWYRSPELLLGAPY  178 (287)
T ss_pred             cccccccccccccCCcHHHcCCCC
Confidence                 3467889999999887665

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.96  E-value=8.8e-29  Score=186.69  Aligned_cols=163  Identities=18%  Similarity=0.222  Sum_probs=137.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..++..+|+|++....  .......+..|..++..+ .|++|+.+.+.+.+.+..+++|||+++++|
T Consensus         9 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L   88 (323)
T cd05616           9 GKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL   88 (323)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCH
Confidence            45677899999999999999999987432  223344567788888777 689999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.+....               .+++..++.++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        89 ~~~~~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~  153 (323)
T cd05616          89 MYQIQQVG---------------RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMW  153 (323)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence            98887653               488899999999999999999999999999999999999999999999999874322


Q ss_pred             -----ccccceeeeeecccCCCcccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                           ....+++.|+|||++.+.+++
T Consensus       154 ~~~~~~~~~gt~~y~aPE~~~~~~~~  179 (323)
T cd05616         154 DGVTTKTFCGTPDYIAPEIIAYQPYG  179 (323)
T ss_pred             CCCccccCCCChhhcCHHHhcCCCCC
Confidence                 245678999999999887653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=7.5e-29  Score=187.69  Aligned_cols=160  Identities=16%  Similarity=0.150  Sum_probs=136.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.+|+|++...  ........+.+|..++..++|++|+.+++.+.+++..+++|||+++++|.
T Consensus        10 G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~   89 (331)
T cd05624          10 GRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLL   89 (331)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHH
Confidence            4556788999999999999999998642  12233445788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .+++..+..++.|++.||.+||+++++||||||+||+++.++.++|+|||++......
T Consensus        90 ~~l~~~~~--------------~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          90 TLLSKFED--------------RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             HHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence            99976432              4788999999999999999999999999999999999999999999999998754432


Q ss_pred             ------cccceeeeeecccCCC
Q psy2674         160 ------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~~  175 (183)
                            ...++..|+|||++.+
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05624         156 GTVQSSVAVGTPDYISPEILQA  177 (331)
T ss_pred             CceeeccccCCcccCCHHHHhc
Confidence                  2457889999999764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.96  E-value=7.2e-29  Score=187.95  Aligned_cols=158  Identities=22%  Similarity=0.324  Sum_probs=132.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-----ccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-----PHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~   75 (183)
                      |.-.++.||++.+..++..||+|.+... .......++.+|+++++.++||||+++++++...+     ..++++||++ 
T Consensus         9 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-   87 (338)
T cd07859           9 GKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-   87 (338)
T ss_pred             eecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-
Confidence            4456788999999999999999998732 22333457889999999999999999999886432     4799999997 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+....               .+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++..
T Consensus        88 ~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~  152 (338)
T cd07859          88 SDLHQVIKAND---------------DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARV  152 (338)
T ss_pred             CCHHHHHHhcc---------------cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccc
Confidence            78998886553               488999999999999999999999999999999999999999999999999874


Q ss_pred             CCc--------ccccceeeeeecccCCC
Q psy2674         156 TYQ--------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       156 ~~~--------~~~~~~~~~~~pe~~~~  175 (183)
                      ...        ....++++|+|||++.+
T Consensus       153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~  180 (338)
T cd07859         153 AFNDTPTAIFWTDYVATRWYRAPELCGS  180 (338)
T ss_pred             cccccCccccccCCCCCCCcCCHHHHhc
Confidence            322        23467899999999765

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.96  E-value=5.6e-29  Score=187.84  Aligned_cols=161  Identities=19%  Similarity=0.262  Sum_probs=134.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHH---hcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLF---CKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l---~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-..+.||++.+..+++.||+|++....  .....+.+.+|+.++   +.++||||+++++++.+.+..+++|||++++
T Consensus         8 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   87 (324)
T cd05589           8 GRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGG   87 (324)
T ss_pred             eecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCC
Confidence            45567889999999999999999987432  222344666776655   4567999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|...+...                .+++..++.++.|++.|+.|||+++++||||||+||+++.++.+||+|||++...
T Consensus        88 ~L~~~~~~~----------------~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~  151 (324)
T cd05589          88 DLMMHIHTD----------------VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG  151 (324)
T ss_pred             cHHHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence            998877432                4889999999999999999999999999999999999999999999999998743


Q ss_pred             Cc-----ccccceeeeeecccCCCccc
Q psy2674         157 YQ-----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~-----~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..     ....+++.|+|||++.+..+
T Consensus       152 ~~~~~~~~~~~g~~~y~aPE~~~~~~~  178 (324)
T cd05589         152 MGFGDRTSTFCGTPEFLAPEVLTETSY  178 (324)
T ss_pred             CCCCCcccccccCccccCHhHhcCCCC
Confidence            22     23567899999999887654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.96  E-value=5.7e-29  Score=187.74  Aligned_cols=163  Identities=17%  Similarity=0.224  Sum_probs=137.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..+++.||+|++....  .....+.+..|..+++.+ +|++|+++.+.+.+++..+++|||+++++|
T Consensus         9 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L   88 (323)
T cd05615           9 GKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL   88 (323)
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcH
Confidence            45677899999999999999999987421  223345677888888888 467888899999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus        89 ~~~i~~~~---------------~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~  153 (323)
T cd05615          89 MYHIQQVG---------------KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV  153 (323)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence            99887653               488999999999999999999999999999999999999999999999999875432


Q ss_pred             -----ccccceeeeeecccCCCcccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                           ....++..|+|||++.+.+++
T Consensus       154 ~~~~~~~~~gt~~y~aPE~~~~~~~~  179 (323)
T cd05615         154 DGVTTRTFCGTPDYIAPEIIAYQPYG  179 (323)
T ss_pred             CCccccCccCCccccCHHHHcCCCCC
Confidence                 234578999999999876653

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.96  E-value=8.4e-29  Score=186.46  Aligned_cols=163  Identities=18%  Similarity=0.242  Sum_probs=139.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..++..+|+|++....  .......+.+|..+++.+ +||||+++++++.+.+..+++|||+++++|
T Consensus         4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   83 (318)
T cd05570           4 GKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDL   83 (318)
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCH
Confidence            55678899999999999999999987432  233445677888888887 799999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+....               .+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||+++....
T Consensus        84 ~~~~~~~~---------------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~  148 (318)
T cd05570          84 MFHIQRSG---------------RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL  148 (318)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCc
Confidence            98887653               488999999999999999999999999999999999999999999999999874322


Q ss_pred             -----ccccceeeeeecccCCCcccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                           ....++..|+|||++.+..++
T Consensus       149 ~~~~~~~~~g~~~y~aPE~~~~~~~~  174 (318)
T cd05570         149 GGVTTSTFCGTPDYIAPEILSYQPYG  174 (318)
T ss_pred             CCCcccceecCccccCHHHhcCCCCC
Confidence                 234578899999999887663

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-28  Score=182.70  Aligned_cols=164  Identities=17%  Similarity=0.186  Sum_probs=138.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-..+.||++.+..++..||+|++....  .......+.+|+.+++.++|+||+.+++.+.+++..+++|||+++++|.
T Consensus         9 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~   88 (285)
T cd05605           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK   88 (285)
T ss_pred             ecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHH
Confidence            44567889999999999999999986432  2223346778999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+.....             ..+++..+..++.|++.|+.|||+++++|+||+|+||++++++.++|+|||++......
T Consensus        89 ~~~~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05605          89 FHIYNMGN-------------PGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG  155 (285)
T ss_pred             HHHHhcCc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence            88865422             24889999999999999999999999999999999999999999999999998765332


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++..|+|||++.+..+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~  178 (285)
T cd05605         156 ETIRGRVGTVGYMAPEVVKNERY  178 (285)
T ss_pred             CccccccCCCCccCcHHhcCCCC
Confidence                2356789999999876544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG1095|consensus

Probab=99.96  E-value=7.1e-29  Score=203.65  Aligned_cols=172  Identities=30%  Similarity=0.494  Sum_probs=142.8

Q ss_pred             CCCCCceeeeccCCCC-----cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQD-----TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-+++.||.+.-...     ...||+|.+....+.+....|.+|..++++++||||++++|++.+.+..++++|||++|
T Consensus       701 G~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gG  780 (1025)
T KOG1095|consen  701 GKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGG  780 (1025)
T ss_pred             ccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccC
Confidence            3445555555444332     44599999998888888899999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.++++.......+        ...+...+.+.++.+|+.|+.||+++++|||||..+|+|++....+||+|||+|+.+
T Consensus       781 DL~sflr~~r~~~~~--------~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDi  852 (1025)
T KOG1095|consen  781 DLLSFLRESRPAPFQ--------PSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDI  852 (1025)
T ss_pred             cHHHHHHhcccccCC--------CCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhh
Confidence            999999987543322        246899999999999999999999999999999999999999999999999999977


Q ss_pred             Ccccccc-------eeeeeecccCCC----cccccc
Q psy2674         157 YQKEYYK-------YRWVICSNIAEG----RRLNVF  181 (183)
Q Consensus       157 ~~~~~~~-------~~~~~~pe~~~~----~~~~~~  181 (183)
                      ...+|+.       .-.|||||.+..    ...|+|
T Consensus       853 y~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvW  888 (1025)
T KOG1095|consen  853 YDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVW  888 (1025)
T ss_pred             hhchheeccCccccceecCCHHHHhhcccccccchh
Confidence            7766654       234678998763    344665

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.96  E-value=3.2e-28  Score=179.94  Aligned_cols=165  Identities=13%  Similarity=0.173  Sum_probs=137.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|--.++.||++....+|+.+|+|.+....  .......+..|+++++.++||||+++.+.+.++...+++|||+++++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            355678899999999999999999986322  112233556799999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...+.....             ..+++..+..++.|++.|++|||+.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        81 ~~~~~~~~~-------------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~  147 (277)
T cd05607          81 KYHIYNVGE-------------RGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD  147 (277)
T ss_pred             HHHHHhccc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence            988865432             2478888899999999999999999999999999999999999999999999875543


Q ss_pred             c----cccceeeeeecccCCCccc
Q psy2674         159 K----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      .    ...++..|+|||++.+..+
T Consensus       148 ~~~~~~~~~~~~y~aPE~~~~~~~  171 (277)
T cd05607         148 GKTITQRAGTNGYMAPEILKEEPY  171 (277)
T ss_pred             CceeeccCCCCCccCHHHHccCCC
Confidence            2    2456789999999877654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.96  E-value=2e-28  Score=188.20  Aligned_cols=176  Identities=23%  Similarity=0.303  Sum_probs=134.6

Q ss_pred             CCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           3 LIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         3 ~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      --.++.||++.     ...++..||+|++.........+.+.+|+.+++.+ +||||+++++++.+.+..+++|||+++|
T Consensus        45 ~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g  124 (375)
T cd05104          45 AGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYG  124 (375)
T ss_pred             CCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCC
Confidence            33455565553     45678899999997554444556788999999999 8999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCC-------------------------------------CCCC-----------------------C
Q psy2674          77 DLKQFLLATRKDSKD-------------------------------------KSGS-----------------------G   96 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~-------------------------------------~~~~-----------------------~   96 (183)
                      +|.+++.........                                     ....                       .
T Consensus       125 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (375)
T cd05104         125 DLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEIL  204 (375)
T ss_pred             cHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHH
Confidence            999998754210000                                     0000                       0


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-------ccceeeeee
Q psy2674          97 KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-------YYKYRWVIC  169 (183)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-------~~~~~~~~~  169 (183)
                      ......+++..++.++.|++.|+.|||+++++||||||.||+++.++.++|+|||++.......       ...+..|+|
T Consensus       205 ~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~a  284 (375)
T cd05104         205 EEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMA  284 (375)
T ss_pred             hccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeC
Confidence            0011247788899999999999999999999999999999999999999999999997554322       122356999


Q ss_pred             cccCCCccc
Q psy2674         170 SNIAEGRRL  178 (183)
Q Consensus       170 pe~~~~~~~  178 (183)
                      ||++.+..+
T Consensus       285 PE~~~~~~~  293 (375)
T cd05104         285 PESIFNCVY  293 (375)
T ss_pred             hhHhcCCCC
Confidence            999877655

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.96  E-value=1.4e-28  Score=186.23  Aligned_cols=159  Identities=16%  Similarity=0.162  Sum_probs=135.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++....+++.+|+|++...  ........+.+|+.++..++|++|+.+.+.+.+++..+++|||+++++|.
T Consensus        10 G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~   89 (332)
T cd05623          10 GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLL   89 (332)
T ss_pred             EeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHH
Confidence            4556788999999999999999998632  12223345788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .+++..++.++.|++.++.+||+++++||||||+||+++.++.++|+|||++......
T Consensus        90 ~~l~~~~~--------------~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~  155 (332)
T cd05623          90 TLLSKFED--------------RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  155 (332)
T ss_pred             HHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence            99976432              4788899999999999999999999999999999999999999999999998754322


Q ss_pred             ------cccceeeeeecccCC
Q psy2674         160 ------EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~  174 (183)
                            ...+++.|+|||++.
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~  176 (332)
T cd05623         156 GTVQSSVAVGTPDYISPEILQ  176 (332)
T ss_pred             CcceecccccCccccCHHHHh
Confidence                  246789999999975

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.96  E-value=1.8e-28  Score=185.63  Aligned_cols=160  Identities=16%  Similarity=0.238  Sum_probs=133.6

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCC---CCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHS---KDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-.++.||.+..   ..+++.+|+|++...   ......+.+.+|+++++.+ +|++|+++++.+..++..+++|||++
T Consensus         9 g~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~   88 (332)
T cd05614           9 GTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVS   88 (332)
T ss_pred             eecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCC
Confidence            4456777886654   457899999998632   1223345678899999999 69999999999999999999999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+.+....               .+++..+..++.|++.||.|||+++++||||||+|||++.++.++|+|||++.
T Consensus        89 ~g~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~  153 (332)
T cd05614          89 GGEMFTHLYQRD---------------NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSK  153 (332)
T ss_pred             CCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence            999999886553               48889999999999999999999999999999999999999999999999987


Q ss_pred             CCCcc------cccceeeeeecccCCCc
Q psy2674         155 DTYQK------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       155 ~~~~~------~~~~~~~~~~pe~~~~~  176 (183)
                      .....      ...++..|+|||++.+.
T Consensus       154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~  181 (332)
T cd05614         154 EFLSEEKERTYSFCGTIEYMAPEIIRGK  181 (332)
T ss_pred             cccccCCCccccccCCccccCHHHhcCC
Confidence            54221      34678999999998764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.96  E-value=6e-28  Score=177.44  Aligned_cols=163  Identities=20%  Similarity=0.220  Sum_probs=135.4

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.++.||++..   ...+..||+|.+...........+.+|+..++.++||||+++++++..++..+++|||+++++|
T Consensus        14 g~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   93 (266)
T cd05064          14 GTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGAL   93 (266)
T ss_pred             cccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcH
Confidence            4445677776643   3567899999998665555566789999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.|+.|||+++++|+||+|+||+++.++.++++|||.+.....
T Consensus        94 ~~~l~~~~~--------------~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~  159 (266)
T cd05064          94 DSFLRKHEG--------------QLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS  159 (266)
T ss_pred             HHHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence            999876432              478899999999999999999999999999999999999999999999998765432


Q ss_pred             cc------ccceeeeeecccCCCccc
Q psy2674         159 KE------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~------~~~~~~~~~pe~~~~~~~  178 (183)
                      ..      ..++..|+|||.+.+.++
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (266)
T cd05064         160 EAIYTTMSGKSPVLWAAPEAIQYHHF  185 (266)
T ss_pred             cchhcccCCCCceeecCHHHHhhCCc
Confidence            21      123467999999877655

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.96  E-value=6e-28  Score=185.53  Aligned_cols=177  Identities=21%  Similarity=0.318  Sum_probs=136.1

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |--.++.||++..     ..++..||+|.+.........+.+.+|+++++.+ +|+||+++++.+.+++..+++|||+++
T Consensus        47 G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~  126 (374)
T cd05106          47 GAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCY  126 (374)
T ss_pred             cCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccC
Confidence            4445667776653     3455689999998665555566788999999999 899999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCC-------------------------------------------------------CCCCCCCC
Q psy2674          76 GDLKQFLLATRKDSKDK-------------------------------------------------------SGSGKPRV  100 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~-------------------------------------------------------~~~~~~~~  100 (183)
                      |+|.+++..........                                                       ........
T Consensus       127 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  206 (374)
T cd05106         127 GDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDS  206 (374)
T ss_pred             CcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccccchhccCCC
Confidence            99999986542110000                                                       00001122


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-------ccceeeeeecccC
Q psy2674         101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-------YYKYRWVICSNIA  173 (183)
Q Consensus       101 ~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-------~~~~~~~~~pe~~  173 (183)
                      ..+++..++.++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.......       ..++..|+|||++
T Consensus       207 ~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~  286 (374)
T cd05106         207 WPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESI  286 (374)
T ss_pred             CCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHh
Confidence            357888899999999999999999999999999999999999999999999987543321       1224569999998


Q ss_pred             CCccc
Q psy2674         174 EGRRL  178 (183)
Q Consensus       174 ~~~~~  178 (183)
                      .+..|
T Consensus       287 ~~~~~  291 (374)
T cd05106         287 FDCVY  291 (374)
T ss_pred             cCCCC
Confidence            76554

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0584|consensus

Probab=99.96  E-value=4.5e-29  Score=193.18  Aligned_cols=158  Identities=18%  Similarity=0.223  Sum_probs=140.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeecc---CCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc--cEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLV---HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP--HYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~---~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~lv~e~~~~~   76 (183)
                      |.-++=+||++.+..+|.+||.-.++   ...++..++++..|+.+|+.++|+||++++.+|.+...  +.+++|.+..|
T Consensus        49 GrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSG  128 (632)
T KOG0584|consen   49 GRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSG  128 (632)
T ss_pred             ccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCC
Confidence            55566679999999999999977665   44567778899999999999999999999999998665  78999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--CceecccccceeEec-cCCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--RLIHKDIAARNCLIS-SDLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--~ivH~di~~~nil~~-~~~~~ki~dfg~a  153 (183)
                      +|..++.+.++               ++...+..|+.||+.||.|||++  +|+|||||-+||+++ ..|.+||+|+|+|
T Consensus       129 tLr~Y~kk~~~---------------vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLA  193 (632)
T KOG0584|consen  129 TLREYRKKHRR---------------VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLA  193 (632)
T ss_pred             cHHHHHHHhcc---------------CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHH
Confidence            99999999865               88899999999999999999988  799999999999997 5699999999999


Q ss_pred             CCCCc---ccccceeeeeecccCC
Q psy2674         154 KDTYQ---KEYYKYRWVICSNIAE  174 (183)
Q Consensus       154 ~~~~~---~~~~~~~~~~~pe~~~  174 (183)
                      .....   ....|||-|||||+..
T Consensus       194 tl~r~s~aksvIGTPEFMAPEmYE  217 (632)
T KOG0584|consen  194 TLLRKSHAKSVIGTPEFMAPEMYE  217 (632)
T ss_pred             HHhhccccceeccCccccChHHHh
Confidence            85543   3578999999999986

>KOG0579|consensus

Probab=99.96  E-value=1.6e-29  Score=196.76  Aligned_cols=164  Identities=19%  Similarity=0.339  Sum_probs=146.2

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      +|-.++|+||+|....++...|.|++..... +.++.+.-||++|..+.||+|+++++.|..++.+|++.|+|+||.+..
T Consensus        40 LGDGAFGKVyKA~nket~~lAAaKvIetkse-EELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDa  118 (1187)
T KOG0579|consen   40 LGDGAFGKVYKAVNKETKLLAAAKVIETKSE-EELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDA  118 (1187)
T ss_pred             hcCccchhhhhhhcccchhhhhhhhhcccch-hHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhH
Confidence            3567899999999999999999999975544 446688999999999999999999999999999999999999999998


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      .+-.-+.              .+.+.++..++.|+|.+|.|||++.|||||+|+.|||++.+|.++++|||.+.....  
T Consensus       119 imlEL~r--------------~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~  184 (1187)
T KOG0579|consen  119 IMLELGR--------------VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR  184 (1187)
T ss_pred             HHHHhcc--------------ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHH
Confidence            8877654              799999999999999999999999999999999999999999999999999875443  


Q ss_pred             ---ccccceeeeeecccCC-----Ccccc
Q psy2674         159 ---KEYYKYRWVICSNIAE-----GRRLN  179 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~-----~~~~~  179 (183)
                         +.+.||++|||||+..     ..|||
T Consensus       185 qkRDsFIGTPYWMAPEVvmCET~KD~PYD  213 (1187)
T KOG0579|consen  185 QKRDSFIGTPYWMAPEVVMCETFKDQPYD  213 (1187)
T ss_pred             hhhccccCCcccccchheeeccccCCCch
Confidence               5789999999999964     47775

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.96  E-value=5.5e-28  Score=184.81  Aligned_cols=159  Identities=20%  Similarity=0.311  Sum_probs=132.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~   74 (183)
                      |.-.++.||++.+..++..+|+|.+... .+......+.+|+.+++.++||||+++++++...+      ..+++|||++
T Consensus        30 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~  109 (359)
T cd07876          30 GSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD  109 (359)
T ss_pred             ecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCC
Confidence            4567788999999999999999998733 33444557889999999999999999999986543      4689999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       ++|.+.+..                 .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++.
T Consensus       110 -~~l~~~~~~-----------------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~  171 (359)
T cd07876         110 -ANLCQVIHM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  171 (359)
T ss_pred             -cCHHHHHhc-----------------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence             567666532                 37788889999999999999999999999999999999999999999999997


Q ss_pred             CCCcc----cccceeeeeecccCCCccc
Q psy2674         155 DTYQK----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       155 ~~~~~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....+    ...++..|+|||++.+..+
T Consensus       172 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~  199 (359)
T cd07876         172 TACTNFMMTPYVVTRYYRAPEVILGMGY  199 (359)
T ss_pred             ccccCccCCCCcccCCCCCchhccCCCC
Confidence            54332    3566889999999988665

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=2.7e-28  Score=182.91  Aligned_cols=159  Identities=22%  Similarity=0.316  Sum_probs=134.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..+|+|.+...........+.+|+++++.++|+||+++++++..++..++++||++ ++|.+.
T Consensus        15 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~   93 (309)
T cd07872          15 GEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-KDLKQY   93 (309)
T ss_pred             cccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC-CCHHHH
Confidence            4556788999999999999999998744333333467789999999999999999999999999999999998 688888


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....              .+++..+..++.|++.||.|||+++++||||+|+||+++.++.++|+|||++.....   
T Consensus        94 ~~~~~~--------------~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          94 MDDCGN--------------IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK  159 (309)
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence            765532              478888999999999999999999999999999999999999999999999874322   


Q ss_pred             --ccccceeeeeecccCCC
Q psy2674         159 --KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~  175 (183)
                        ....++.+|+|||++.+
T Consensus       160 ~~~~~~~~~~y~aPE~~~~  178 (309)
T cd07872         160 TYSNEVVTLWYRPPDVLLG  178 (309)
T ss_pred             ccccccccccccCCHHHhC
Confidence              13455789999998765

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG0607|consensus

Probab=99.96  E-value=3.3e-29  Score=181.22  Aligned_cols=158  Identities=17%  Similarity=0.211  Sum_probs=137.5

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      +|--+.|.|..|....+|.++|||++.+... ..+.+..+|++++..+ .|+||+.++++|+++..+|+|||-+.||+|.
T Consensus        86 LGeGAyasVqtcv~i~t~~EYAVKiidKq~g-HsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplL  164 (463)
T KOG0607|consen   86 LGEGAYASVQTCVSIQTGKEYAVKIIDKQPG-HSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLL  164 (463)
T ss_pred             hcCccceeeeeeeeeccchhhhhhhhhcCCc-hHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHH
Confidence            4667889999999999999999999987744 3567899999999999 6999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---CCceEEecccCCCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSKDT  156 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---~~~~ki~dfg~a~~~  156 (183)
                      +++....               .+++..+..+..+|+.||.|||.+||.|||+||.|||...   ..-+||+||.++..+
T Consensus       165 shI~~~~---------------~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~  229 (463)
T KOG0607|consen  165 SHIQKRK---------------HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGI  229 (463)
T ss_pred             HHHHHhh---------------hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeecccccccc
Confidence            9988774               5999999999999999999999999999999999999953   345899999998744


Q ss_pred             Ccc------------cccceeeeeecccCC
Q psy2674         157 YQK------------EYYKYRWVICSNIAE  174 (183)
Q Consensus       157 ~~~------------~~~~~~~~~~pe~~~  174 (183)
                      ..+            .-+|+.-|||||+..
T Consensus       230 k~~~~~spastP~L~tPvGSAEfMAPEVVd  259 (463)
T KOG0607|consen  230 KLNNDCSPASTPELLTPVGSAEFMAPEVVD  259 (463)
T ss_pred             ccCCCCCCCCCccccCcccchhhcchhHHh
Confidence            332            234567899999963

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.96  E-value=7.5e-28  Score=190.70  Aligned_cols=167  Identities=22%  Similarity=0.248  Sum_probs=138.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC--------ccEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD--------PHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~~~lv~e~   72 (183)
                      |.-.++.||++.+..+++.||+|.+... ........+.+|+..+..++|+|++++.+.+...+        ..++++||
T Consensus        41 G~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey  120 (496)
T PTZ00283         41 GSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDY  120 (496)
T ss_pred             ecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeC
Confidence            4556788999999999999999998743 34555667889999999999999999988775432        26799999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      +++++|.+.+.....           ....+++..+..++.|++.+|.|+|+++++||||||+||+++.++.+||+|||+
T Consensus       121 ~~~gsL~~~l~~~~~-----------~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGl  189 (496)
T PTZ00283        121 ANAGDLRQEIKSRAK-----------TNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF  189 (496)
T ss_pred             CCCCcHHHHHHHhhc-----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEeccc
Confidence            999999999875432           113588999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCc-------ccccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQ-------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~-------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++....       ....+++.|+|||++.+.+|+
T Consensus       190 s~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s  223 (496)
T PTZ00283        190 SKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYS  223 (496)
T ss_pred             CeeccccccccccccccCCcceeCHHHhCCCCCC
Confidence            875432       235678999999999887653

>KOG0666|consensus

Probab=99.96  E-value=1.7e-29  Score=182.03  Aligned_cols=163  Identities=21%  Similarity=0.317  Sum_probs=132.9

Q ss_pred             CCCCCceeeeccCCCC----cceEEEeeccCCCCHHHH-HHHHHHHHHHhcCCCcceeeEEeEEec-CCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQD----TSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRD-GDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~----~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~   75 (183)
                      |.-..+.||+|....+    .+.+|+|.++..++.... ....||+.+++.++|+|++.+..+|.. +..+++++||.+ 
T Consensus        33 g~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAE-  111 (438)
T KOG0666|consen   33 GRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAE-  111 (438)
T ss_pred             cccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhh-
Confidence            3445677888855443    338999999854332211 256789999999999999999999876 778999999998 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC----CceEEeccc
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD----LSVKISLSG  151 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~----~~~ki~dfg  151 (183)
                      .+|.+.+..+..          +....++...+..+++||+.|+.|||++=++|||+||.|||+..+    |.+||+|||
T Consensus       112 hDL~~II~fHr~----------~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG  181 (438)
T KOG0666|consen  112 HDLWHIIKFHRA----------SKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG  181 (438)
T ss_pred             hhHHHHHHHhcc----------chhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence            899999977643          122368889999999999999999999999999999999999766    999999999


Q ss_pred             CCCCCC--------cccccceeeeeecccCCC
Q psy2674         152 LSKDTY--------QKEYYKYRWVICSNIAEG  175 (183)
Q Consensus       152 ~a~~~~--------~~~~~~~~~~~~pe~~~~  175 (183)
                      +|+.+.        .+....|-||+|||++.|
T Consensus       182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLG  213 (438)
T KOG0666|consen  182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLG  213 (438)
T ss_pred             HHHHhhccccccccCCceEEEEEecChHHhcc
Confidence            999543        356677999999999998

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.96  E-value=1.6e-27  Score=178.71  Aligned_cols=162  Identities=15%  Similarity=0.203  Sum_probs=141.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..+++|.+..........++.+|+++++.++||||+++++.+.+++..++++||+++++|.++
T Consensus        10 g~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~   89 (308)
T cd06615          10 GAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV   89 (308)
T ss_pred             cCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHH
Confidence            44567889999999999999999987554555566788999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      +....               .+++..+..++.|++.++.|||+ .+++|+||+|+||+++.++.++++|||++.....  
T Consensus        90 l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  154 (308)
T cd06615          90 LKKAG---------------RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  154 (308)
T ss_pred             HHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence            97653               47889999999999999999997 5999999999999999999999999999875432  


Q ss_pred             -ccccceeeeeecccCCCccc
Q psy2674         159 -KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~~  178 (183)
                       ....++..|+|||++.+..+
T Consensus       155 ~~~~~~~~~~~aPE~~~~~~~  175 (308)
T cd06615         155 ANSFVGTRSYMSPERLQGTHY  175 (308)
T ss_pred             cccCCCCcCccChhHhcCCCC
Confidence             34567889999999877654

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.96  E-value=9.5e-28  Score=197.49  Aligned_cols=173  Identities=19%  Similarity=0.186  Sum_probs=140.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |-..++.||++.+..+++.||+|++...  ......+++.+|+++++.++||||+++++++.+.+..+++|||++|++|.
T Consensus        11 GkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~   90 (932)
T PRK13184         11 GKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLK   90 (932)
T ss_pred             ecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHH
Confidence            4567789999999999999999998743  23445567899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++.......    ..........+...++.++.|++.|+.+||++|++||||||+||+++.++.++|+|||++..... 
T Consensus        91 ~lL~s~~~~~----~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~  166 (932)
T PRK13184         91 SLLKSVWQKE----SLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLE  166 (932)
T ss_pred             HHHHHhhhcc----ccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccc
Confidence            9987542111    00001112356677889999999999999999999999999999999999999999999875411 


Q ss_pred             ----------------------ccccceeeeeecccCCCccc
Q psy2674         159 ----------------------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----------------------~~~~~~~~~~~pe~~~~~~~  178 (183)
                                            ....+|+.|+|||++.+.++
T Consensus       167 ~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~  208 (932)
T PRK13184        167 EEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPA  208 (932)
T ss_pred             cccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCC
Confidence                                  12357899999999988665

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.96  E-value=2.3e-27  Score=175.24  Aligned_cols=177  Identities=28%  Similarity=0.478  Sum_probs=139.7

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++..     ..++..+|+|.+......+..+.+.+|+++++.++|+|++++++++...+..+++|||++++
T Consensus        14 g~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   93 (280)
T cd05049          14 GEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHG   93 (280)
T ss_pred             cccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCC
Confidence            3445566666654     35578999999986655555678999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++...+....... ........+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++++|||++...
T Consensus        94 ~L~~~i~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~  172 (280)
T cd05049          94 DLNKFLRSHGPDAAFLK-SPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDV  172 (280)
T ss_pred             CHHHHHHhcCCchhhhc-ccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceec
Confidence            99999977643211110 01112235788899999999999999999999999999999999999999999999998754


Q ss_pred             Ccc-------cccceeeeeecccCCCcccc
Q psy2674         157 YQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       157 ~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...       ....+..|+|||++.+..++
T Consensus       173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  202 (280)
T cd05049         173 YTTDYYRVGGHTMLPIRWMPPESIMYRKFT  202 (280)
T ss_pred             ccCcceecCCCCcccceecChhhhccCCcc
Confidence            332       22235679999998876653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.95  E-value=1.4e-27  Score=177.15  Aligned_cols=164  Identities=16%  Similarity=0.158  Sum_probs=138.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+++||++.+..+++.+|+|.+....  .......+.+|+++++.++|++++.+.+.+.+++..++++||+.+++|.
T Consensus         9 g~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   88 (285)
T cd05632           9 GKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLK   88 (285)
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHH
Confidence            45567889999999999999999986432  2233446788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ..+.....             ..+++..+..++.|++.++.|||+.+++|+||+|+||+++.++.++|+|||++......
T Consensus        89 ~~~~~~~~-------------~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          89 FHIYNMGN-------------PGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             HHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence            88865432             25899999999999999999999999999999999999999999999999998654322


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++..|+|||++.+..+
T Consensus       156 ~~~~~~~g~~~~~aPE~~~~~~~  178 (285)
T cd05632         156 ESIRGRVGTVGYMAPEVLNNQRY  178 (285)
T ss_pred             CcccCCCCCcCccChHHhcCCCC
Confidence                3456889999999877555

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>KOG0574|consensus

Probab=99.95  E-value=2e-29  Score=181.40  Aligned_cols=161  Identities=22%  Similarity=0.280  Sum_probs=144.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--..+.|++|.+..+|..+|+|.+....+   ++.+..|+.+++++++++++++++.+.....+|+|||||..|+..+.
T Consensus        42 GEGSYGSV~KAIH~EsG~v~AIK~VPV~sD---LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI  118 (502)
T KOG0574|consen   42 GEGSYGSVHKAIHRESGHVLAIKKVPVDTD---LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDI  118 (502)
T ss_pred             cCCcchHHHHHHHhccCcEEEEEecCccch---HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHH
Confidence            455677899999999999999999875543   45789999999999999999999999988899999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      ++...+              ++.+..+..++.+.+.|++|||...-+|||||..|||++.+|..|++|||.|.....   
T Consensus       119 ~R~R~K--------------~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA  184 (502)
T KOG0574|consen  119 MRARRK--------------PLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA  184 (502)
T ss_pred             HHHhcC--------------CccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence            987755              799999999999999999999999999999999999999999999999999986543   


Q ss_pred             --ccccceeeeeecccCCCcccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~  179 (183)
                        +...||++|||||++.--.||
T Consensus       185 KRNTVIGTPFWMAPEVI~EIGY~  207 (502)
T KOG0574|consen  185 KRNTVIGTPFWMAPEVIEEIGYD  207 (502)
T ss_pred             hhCccccCcccccHHHHHHhccc
Confidence              578999999999998765554

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.95  E-value=1.9e-27  Score=183.99  Aligned_cols=177  Identities=23%  Similarity=0.380  Sum_probs=135.2

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |.-.++.||++..     ..++..||+|++.........+.+.+|+++++.+. ||||+++++++.+.+..+++|||+++
T Consensus        46 G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~  125 (400)
T cd05105          46 GSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFY  125 (400)
T ss_pred             cCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCC
Confidence            3445566666653     34456899999976555555678999999999995 99999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCC--------------------------------------C------------------------
Q psy2674          76 GDLKQFLLATRKDSKDK--------------------------------------S------------------------   93 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~--------------------------------------~------------------------   93 (183)
                      |+|.+++..........                                      .                        
T Consensus       126 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (400)
T cd05105         126 GDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQR  205 (400)
T ss_pred             CcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhccc
Confidence            99999886542110000                                      0                        


Q ss_pred             ------CC-------------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          94 ------GS-------------GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        94 ------~~-------------~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                            ..             .......+++..++.++.|++.|+.|||+++++|+||+|.||+++.++.++|+|||++.
T Consensus       206 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~  285 (400)
T cd05105         206 SNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLAR  285 (400)
T ss_pred             CcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcce
Confidence                  00             00011247788889999999999999999999999999999999999999999999987


Q ss_pred             CCCcc-------cccceeeeeecccCCCccc
Q psy2674         155 DTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       155 ~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      .....       ...++..|+|||++.+..+
T Consensus       286 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  316 (400)
T cd05105         286 DIMHDSNYVSKGSTFLPVKWMAPESIFDNLY  316 (400)
T ss_pred             eccccccccccCCcCCCcceEChhhhcCCCC
Confidence            54332       2234567999999877654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=4.4e-28  Score=186.16  Aligned_cols=159  Identities=20%  Similarity=0.336  Sum_probs=134.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-----ccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-----PHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~   75 (183)
                      |.-.++.||++.+..+++.||+|.+... .+.....++.+|+.+++.++|+||+++++++..++     ..++++||+. 
T Consensus         9 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-   87 (372)
T cd07853           9 GYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-   87 (372)
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-
Confidence            4557788999999999999999998743 33344567889999999999999999999998766     7899999997 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+....               .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||++..
T Consensus        88 ~~l~~~~~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~  152 (372)
T cd07853          88 SDLHKIIVSPQ---------------PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARV  152 (372)
T ss_pred             cCHHHHHhcCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceee
Confidence            78888775432               488999999999999999999999999999999999999999999999999875


Q ss_pred             CCcc------cccceeeeeecccCCCc
Q psy2674         156 TYQK------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       156 ~~~~------~~~~~~~~~~pe~~~~~  176 (183)
                      ....      ...++++|+|||++.|.
T Consensus       153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~  179 (372)
T cd07853         153 EEPDESKHMTQEVVTQYYRAPEILMGS  179 (372)
T ss_pred             cccCccccCCCCCcCCCcCCHHHHcCC
Confidence            4322      23567899999998774

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.95  E-value=7.6e-28  Score=183.73  Aligned_cols=160  Identities=20%  Similarity=0.308  Sum_probs=134.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~   74 (183)
                      |.-.++.||.+.+..+++.+|+|.+... ........+.+|+.+++.++|+||+++++++....      ..+++|||++
T Consensus        26 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~  105 (355)
T cd07874          26 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMD  105 (355)
T ss_pred             eecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhc
Confidence            5567788999999999999999998743 34444557889999999999999999999986533      4689999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       ++|.+.+..                 .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++
T Consensus       106 -~~l~~~~~~-----------------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~  167 (355)
T cd07874         106 -ANLCQVIQM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_pred             -ccHHHHHhh-----------------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence             677776643                 37788889999999999999999999999999999999999999999999998


Q ss_pred             CCCcc----cccceeeeeecccCCCcccc
Q psy2674         155 DTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       155 ~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .....    ...++..|+|||++.+..|+
T Consensus       168 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  196 (355)
T cd07874         168 TAGTSFMMTPYVVTRYYRAPEVILGMGYK  196 (355)
T ss_pred             cCCCccccCCccccCCccCHHHHcCCCCC
Confidence            65432    45678899999999886653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=2.3e-27  Score=173.71  Aligned_cols=162  Identities=23%  Similarity=0.292  Sum_probs=137.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC----HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD----DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |-...+.+|.+.+..+++++++|.+.....    ......+.+|+++++.++||||+++++++.+++..++++|++++++
T Consensus        11 g~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   90 (263)
T cd06625          11 GQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGS   90 (263)
T ss_pred             cCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCc
Confidence            445678899999999999999999864321    2234578899999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+....               .+++.....++.|++.|+.+||+.+++|+||+|+||+++.++.++|+|||++....
T Consensus        91 l~~~~~~~~---------------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~  155 (263)
T cd06625          91 VKDQLKAYG---------------ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ  155 (263)
T ss_pred             HHHHHHHhC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence            999887653               47888999999999999999999999999999999999999999999999987443


Q ss_pred             c--------ccccceeeeeecccCCCccc
Q psy2674         158 Q--------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~--------~~~~~~~~~~~pe~~~~~~~  178 (183)
                      .        ....++.+|+|||++.+..+
T Consensus       156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (263)
T cd06625         156 TICSSGTGMKSVTGTPYWMSPEVISGEGY  184 (263)
T ss_pred             ccccccccccCCCcCccccCcceeccCCC
Confidence            2        22445778999999887654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG0662|consensus

Probab=99.95  E-value=1.1e-28  Score=165.87  Aligned_cols=160  Identities=19%  Similarity=0.274  Sum_probs=138.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--..+.||+++...+.+.||+|.+....+ +.......+|+-+++.++|.||++++++...+..+-+++|+|+ .+|..
T Consensus        11 gegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd-qdlkk   89 (292)
T KOG0662|consen   11 GEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKK   89 (292)
T ss_pred             cCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-HHHHH
Confidence            455678899999999999999999874443 3334567899999999999999999999998999999999998 88888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      +......              .++.+.++.++.|++.|+.|+|++++.|||+||.|.+++.+|..|++|||+++...-. 
T Consensus        90 yfdslng--------------~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipv  155 (292)
T KOG0662|consen   90 YFDSLNG--------------DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV  155 (292)
T ss_pred             HHHhcCC--------------cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence            8866532              5889999999999999999999999999999999999999999999999999965443 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ....|.||+||.++.|.
T Consensus       156 rcysaevvtlwyrppdvlfga  176 (292)
T KOG0662|consen  156 RCYSAEVVTLWYRPPDVLFGA  176 (292)
T ss_pred             EeeeceeeeeeccCcceeeee
Confidence                23458999999999874

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.95  E-value=2.9e-27  Score=172.56  Aligned_cols=164  Identities=22%  Similarity=0.326  Sum_probs=140.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++.+..+++.+++|.+.........+.+.+|+.+++.++|+|++++.+.+.+++..++++||+++++|.+.
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~   88 (255)
T cd08219           9 GEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQK   88 (255)
T ss_pred             eccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHH
Confidence            44567789999999999999999987544455566788999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....             ..+++...+.++.|++.|+.+||+++++|+||+|+||+++.++.++++|||.+......  
T Consensus        89 ~~~~~~-------------~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  155 (255)
T cd08219          89 IKLQRG-------------KLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA  155 (255)
T ss_pred             HHhccC-------------CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc
Confidence            865321             24788999999999999999999999999999999999999999999999998754332  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||++.+..+
T Consensus       156 ~~~~~~~~~~~~aPE~~~~~~~  177 (255)
T cd08219         156 YACTYVGTPYYVPPEIWENMPY  177 (255)
T ss_pred             ccccccCCccccCHHHHccCCc
Confidence               3456778999999876543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.95  E-value=3e-27  Score=174.87  Aligned_cols=158  Identities=18%  Similarity=0.217  Sum_probs=136.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||++.+..++..+|+|.+...........+.+|+++++.++|||++++++.+..++..++++||+++++|...
T Consensus        10 g~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~   89 (279)
T cd06619          10 GHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY   89 (279)
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh
Confidence            44567889999999999999999987554455556788999999999999999999999999999999999999988654


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      .                   .+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||++.....   
T Consensus        90 ~-------------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~  150 (279)
T cd06619          90 R-------------------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIA  150 (279)
T ss_pred             h-------------------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccc
Confidence            2                   367888899999999999999999999999999999999999999999999975433   


Q ss_pred             ccccceeeeeecccCCCccc
Q psy2674         159 KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....++..|+|||++.+..+
T Consensus       151 ~~~~~~~~y~aPE~~~~~~~  170 (279)
T cd06619         151 KTYVGTNAYMAPERISGEQY  170 (279)
T ss_pred             cCCCCChhhcCceeecCCCC
Confidence            24567889999999877654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=1.3e-27  Score=187.21  Aligned_cols=156  Identities=18%  Similarity=0.182  Sum_probs=133.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--.++.||++.+..+++.||+|....       ..+.+|+++++.++|+||+++++++..++..++++|++. ++|..+
T Consensus       178 g~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~  249 (461)
T PHA03211        178 TPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTY  249 (461)
T ss_pred             ccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHH
Confidence            344678899999999999999996431       245789999999999999999999999999999999996 788888


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..++.++.|++.||.|||+++|+||||||+|||++..+.++|+|||++......  
T Consensus       250 l~~~~~--------------~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~  315 (461)
T PHA03211        250 LGARLR--------------PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS  315 (461)
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence            765422              5889999999999999999999999999999999999999999999999998754321  


Q ss_pred             -----cccceeeeeecccCCCcccc
Q psy2674         160 -----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~~~~  179 (183)
                           ...+|..|+|||++.+..++
T Consensus       316 ~~~~~~~~GT~~Y~APE~~~~~~~~  340 (461)
T PHA03211        316 TPFHYGIAGTVDTNAPEVLAGDPYT  340 (461)
T ss_pred             cccccccCCCcCCcCHHHHcCCCCC
Confidence                 24578999999999887654

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.95  E-value=3e-27  Score=175.77  Aligned_cols=162  Identities=20%  Similarity=0.240  Sum_probs=140.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |....+.+|++.+..+++.+|+|++....  .....+.+.+|+++++.++||||+++++.+.+++..++++||+++++|.
T Consensus        10 g~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   89 (290)
T cd05580          10 GTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELF   89 (290)
T ss_pred             ecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHH
Confidence            44567889999999999999999986432  2334567889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+....               .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++......
T Consensus        90 ~~~~~~~---------------~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  154 (290)
T cd05580          90 SHLRKSG---------------RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR  154 (290)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence            9987653               4889999999999999999999999999999999999999999999999999865443


Q ss_pred             --cccceeeeeecccCCCccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~  178 (183)
                        ...++..|+|||.+.+..+
T Consensus       155 ~~~~~~~~~y~aPE~~~~~~~  175 (290)
T cd05580         155 TYTLCGTPEYLAPEIILSKGY  175 (290)
T ss_pred             CCCCCCCccccChhhhcCCCC
Confidence              3456788999999876543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.95  E-value=3.6e-27  Score=175.04  Aligned_cols=164  Identities=17%  Similarity=0.193  Sum_probs=138.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.+..+++.+|+|.+....  .......+.+|+.+++.++|++++.+.+.+.+.+..++++||+++++|.
T Consensus         9 g~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~   88 (285)
T cd05630           9 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK   88 (285)
T ss_pred             ecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHH
Confidence            44567889999999999999999986432  2223346778999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+.....             ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||++......
T Consensus        89 ~~l~~~~~-------------~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~  155 (285)
T cd05630          89 FHIYHMGE-------------AGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  155 (285)
T ss_pred             HHHHHhcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence            98865432             24888999999999999999999999999999999999999999999999998754432


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++..|+|||++.+..+
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~  178 (285)
T cd05630         156 QTIKGRVGTVGYMAPEVVKNERY  178 (285)
T ss_pred             ccccCCCCCccccChHHHcCCCC
Confidence                2456888999999987654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.95  E-value=4.5e-27  Score=171.46  Aligned_cols=164  Identities=23%  Similarity=0.305  Sum_probs=140.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++....++..+++|.+... ......+.+.+|+++++.++|+|++++++.+.+++..++++||+++++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (256)
T cd08529           9 GKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHK   88 (256)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHH
Confidence            3345678999999999999999998733 345556688899999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++.....             ..+++..++.++.+++.++.+||+.+++|+||+|+||+++.++.++++|||++...... 
T Consensus        89 ~l~~~~~-------------~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~  155 (256)
T cd08529          89 LLKMQRG-------------RPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT  155 (256)
T ss_pred             HHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence            9876421             25888899999999999999999999999999999999999999999999998755433 


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++.+|+|||+..+..+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~  178 (256)
T cd08529         156 NFANTIVGTPYYLSPELCEDKPY  178 (256)
T ss_pred             chhhccccCccccCHHHhcCCCC
Confidence                2356788999999887654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=1.4e-27  Score=182.42  Aligned_cols=156  Identities=19%  Similarity=0.212  Sum_probs=133.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++....++..||+|+....       ....|+.+++.++|+||+++++++.++...++++|++. ++|.++
T Consensus        75 g~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~  146 (357)
T PHA03209         75 TPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYTY  146 (357)
T ss_pred             cCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHHH
Confidence            4557789999999999999999985433       23568999999999999999999999999999999997 788888


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..++.++.|++.||.|||+++++||||||+||+++..+.++|+|||++......  
T Consensus       147 l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  212 (357)
T PHA03209        147 LTKRSR--------------PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPA  212 (357)
T ss_pred             HHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcc
Confidence            865432              5889999999999999999999999999999999999999999999999999743322  


Q ss_pred             --cccceeeeeecccCCCcccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ...++..|+|||++.+..|+
T Consensus       213 ~~~~~gt~~y~aPE~~~~~~~~  234 (357)
T PHA03209        213 FLGLAGTVETNAPEVLARDKYN  234 (357)
T ss_pred             cccccccccccCCeecCCCCCC
Confidence              34578899999999886653

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.95  E-value=5.4e-27  Score=173.58  Aligned_cols=176  Identities=28%  Similarity=0.447  Sum_probs=137.9

Q ss_pred             CCCCceeeeccCCCC-----cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           3 LIPNARGLKASDPQD-----TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      .-..+.||++.....     ...+++|.+...........+.+|+..++.++||||+++++++.+.+..++++||+++++
T Consensus        15 ~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~   94 (283)
T cd05048          15 EGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGD   94 (283)
T ss_pred             CccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCc
Confidence            345566776665443     478999998866566666788999999999999999999999999899999999999999


Q ss_pred             HHHHHHhhccCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          78 LKQFLLATRKDSKDK-SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        78 L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      |.+++.......... ..........+++..++.++.|++.|+.+||+++++|+||+|+||++++++.++|+|||++...
T Consensus        95 L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~  174 (283)
T cd05048          95 LHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDI  174 (283)
T ss_pred             HHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeec
Confidence            999997653321110 0001111235788899999999999999999999999999999999999999999999998754


Q ss_pred             Ccc-------cccceeeeeecccCCCccc
Q psy2674         157 YQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...       ...++..|+|||.+.+..+
T Consensus       175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05048         175 YSADYYRVQSKSLLPVRWMPPEAILYGKF  203 (283)
T ss_pred             cccccccccCCCcccccccCHHHhccCcC
Confidence            322       2344678999999876555

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG1094|consensus

Probab=99.95  E-value=4.2e-28  Score=186.89  Aligned_cols=147  Identities=29%  Similarity=0.568  Sum_probs=128.5

Q ss_pred             cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCC
Q psy2674          18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGK   97 (183)
Q Consensus        18 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~   97 (183)
                      +..||+|++........+..|..|+..|..++||||++++++|..++++++++||+++|+|.+++..+..          
T Consensus       562 ~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~ahea----------  631 (807)
T KOG1094|consen  562 PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHEL----------  631 (807)
T ss_pred             ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccC----------
Confidence            7999999999888888888999999999999999999999999999999999999999999999988732          


Q ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccccce-------eeeeec
Q psy2674          98 PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY-------RWVICS  170 (183)
Q Consensus        98 ~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~~~~-------~~~~~p  170 (183)
                         ..+.......++.||++|+.||.+.++||||+.++|+|++.++++||+|||.++...+.+++..       -.|||+
T Consensus       632 ---pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmaw  708 (807)
T KOG1094|consen  632 ---PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAW  708 (807)
T ss_pred             ---cccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhH
Confidence               1234456777999999999999999999999999999999999999999999998888777653       235555


Q ss_pred             cc-CCCcc
Q psy2674         171 NI-AEGRR  177 (183)
Q Consensus       171 e~-~~~~~  177 (183)
                      |. +.|+.
T Consensus       709 EsillgkF  716 (807)
T KOG1094|consen  709 ESILLGKF  716 (807)
T ss_pred             HHHHhccc
Confidence            55 55644

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.95  E-value=7.3e-27  Score=171.79  Aligned_cols=164  Identities=27%  Similarity=0.370  Sum_probs=129.9

Q ss_pred             CCCCCceeeecc--CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKAS--DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.  .......+++|.+...........+.+|+..++.++|+||+++++.+.+....+++|||+++++|.
T Consensus         4 g~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~   83 (269)
T cd05042           4 GNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLK   83 (269)
T ss_pred             CccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHH
Confidence            444566666653  334567889998765545555567889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++......          .....++...+.++.|++.|++|||+++++||||||.||+++.++.++++|||++......
T Consensus        84 ~~l~~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  153 (269)
T cd05042          84 NYLRSNRGM----------VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE  153 (269)
T ss_pred             HHHHhcccc----------ccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccc
Confidence            998765321          0012457788899999999999999999999999999999999999999999998754332


Q ss_pred             c-------ccceeeeeecccCCC
Q psy2674         160 E-------YYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ~-------~~~~~~~~~pe~~~~  175 (183)
                      .       ..++..|+|||++..
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~  176 (269)
T cd05042         154 DYYITKDCHAVPLRWLAPELVEI  176 (269)
T ss_pred             hheeccCCCCCcccccCHHHHhh
Confidence            2       223456999998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.95  E-value=5.5e-27  Score=171.78  Aligned_cols=163  Identities=17%  Similarity=0.196  Sum_probs=141.3

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|....+.+|++.+..++..+++|++....  .....+.+.+|+.+++.++|+||+++.+.+.+++..++++||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            356677889999999999999999987433  234456789999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..+..++.|++.++.++|+++++|+||+|+||+++.++.++++|||++.....
T Consensus        81 ~~~l~~~~---------------~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~  145 (262)
T cd05572          81 WTILRDRG---------------LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS  145 (262)
T ss_pred             HHHHhhcC---------------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence            99997653               378889999999999999999999999999999999999999999999999986654


Q ss_pred             c----cccceeeeeecccCCCccc
Q psy2674         159 K----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      .    ...++..|+|||.+.+..+
T Consensus       146 ~~~~~~~~~~~~~~~PE~~~~~~~  169 (262)
T cd05572         146 GQKTWTFCGTPEYVAPEIILNKGY  169 (262)
T ss_pred             ccccccccCCcCccChhHhcCCCC
Confidence            3    3456788999999877654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.95  E-value=2.7e-27  Score=181.30  Aligned_cols=160  Identities=19%  Similarity=0.303  Sum_probs=133.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------CccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~   74 (183)
                      |.-.++.||++.+..+++.||+|++... .+......+.+|+.+++.++|+||+++++++...      ...+++|||++
T Consensus        33 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~  112 (364)
T cd07875          33 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD  112 (364)
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCC
Confidence            4566788999999999999999998743 3334455788999999999999999999987643      24699999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       ++|.+.+..                 .+++..+..++.|++.||.|||+++++||||||+||+++.++.++|+|||+++
T Consensus       113 -~~l~~~~~~-----------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~  174 (364)
T cd07875         113 -ANLCQVIQM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  174 (364)
T ss_pred             -CCHHHHHHh-----------------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence             677777643                 37788889999999999999999999999999999999999999999999998


Q ss_pred             CCCc----ccccceeeeeecccCCCcccc
Q psy2674         155 DTYQ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       155 ~~~~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ....    ....++..|+|||++.+..++
T Consensus       175 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  203 (364)
T cd07875         175 TAGTSFMMTPYVVTRYYRAPEVILGMGYK  203 (364)
T ss_pred             ccCCCCcccCCcccCCcCCHHHHhCCCCC
Confidence            5543    245678899999999876653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.95  E-value=2.5e-27  Score=177.03  Aligned_cols=160  Identities=23%  Similarity=0.306  Sum_probs=135.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||++.+..++..||+|.+...........+.+|+..++.++|+||+++++++.+++..++++||++ ++|.+.
T Consensus        15 g~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~l~~~   93 (301)
T cd07873          15 GEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQY   93 (301)
T ss_pred             ccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cCHHHH
Confidence            4556788999999999999999998744333334467789999999999999999999999999999999998 689888


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....              .+++..+..++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++.....   
T Consensus        94 l~~~~~--------------~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  159 (301)
T cd07873          94 LDDCGN--------------SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  159 (301)
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence            866432              478899999999999999999999999999999999999999999999999875332   


Q ss_pred             --ccccceeeeeecccCCCc
Q psy2674         159 --KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~  176 (183)
                        ....++..|+|||++.+.
T Consensus       160 ~~~~~~~~~~y~~PE~~~~~  179 (301)
T cd07873         160 TYSNEVVTLWYRPPDILLGS  179 (301)
T ss_pred             cccccceeecccCcHHHhCC
Confidence              123457889999997653

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.95  E-value=1.6e-27  Score=181.22  Aligned_cols=157  Identities=20%  Similarity=0.295  Sum_probs=132.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------CccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~   74 (183)
                      |.-.++.||++.+..++..||+|.+.... .......+.+|+.+++.++|+||+++++++...      ...+++++++ 
T Consensus        24 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-  102 (343)
T cd07878          24 GSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-  102 (343)
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-
Confidence            55678899999999999999999987432 223345678999999999999999999887643      3468999987 


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+.+...                .+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++.
T Consensus       103 ~~~l~~~~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~  166 (343)
T cd07878         103 GADLNNIVKCQ----------------KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR  166 (343)
T ss_pred             CCCHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccce
Confidence            48898877532                48899999999999999999999999999999999999999999999999998


Q ss_pred             CCCcc--cccceeeeeecccCCC
Q psy2674         155 DTYQK--EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~--~~~~~~~~~~pe~~~~  175 (183)
                      .....  ...++++|+|||++.+
T Consensus       167 ~~~~~~~~~~~t~~y~aPE~~~~  189 (343)
T cd07878         167 QADDEMTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             ecCCCcCCccccccccCchHhcC
Confidence            65443  4567899999999866

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>KOG1989|consensus

Probab=99.95  E-value=1e-27  Score=191.52  Aligned_cols=157  Identities=24%  Similarity=0.315  Sum_probs=133.9

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeE-Eec---C---CccEEEEeeCCC
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGI-CRD---G---DPHYLLLEYTDW   75 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~-~~~---~---~~~~lv~e~~~~   75 (183)
                      -.+|.||.|.....|.++|+|.+... +..++..+.+|+++++.| .|+|||.+++. ...   .   -+++|+||||.|
T Consensus        48 GGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~g  126 (738)
T KOG1989|consen   48 GGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKG  126 (738)
T ss_pred             CCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccC
Confidence            36789999999999999999998755 777788999999999999 59999999993 322   1   247899999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ceecccccceeEeccCCceEEecccCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      |.|-+++..+..             ..+++..++.|+.++|.||..||...  |||||||.+|||++.++..||||||.|
T Consensus       127 g~Lvd~mn~Rlq-------------~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSa  193 (738)
T KOG1989|consen  127 GSLVDFMNTRLQ-------------TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSA  193 (738)
T ss_pred             CcHHHHHHHHHh-------------ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccc
Confidence            999999987643             35999999999999999999999885  999999999999999999999999998


Q ss_pred             CCCCcc--------------cccceeeeeecccCC
Q psy2674         154 KDTYQK--------------EYYKYRWVICSNIAE  174 (183)
Q Consensus       154 ~~~~~~--------------~~~~~~~~~~pe~~~  174 (183)
                      ......              ..+.|+-|++||+++
T Consensus       194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMID  228 (738)
T KOG1989|consen  194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMID  228 (738)
T ss_pred             ccccCCCccHHHHHHHHHHHHhhCCccccChHHHh
Confidence            733221              235588999999974

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.95  E-value=9.8e-27  Score=172.27  Aligned_cols=177  Identities=24%  Similarity=0.348  Sum_probs=136.6

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++..     ..++..||+|.+.........+.+.+|+.++..++||||+++++++.+++..++++||+.++
T Consensus        14 g~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~   93 (283)
T cd05091          14 GEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHS   93 (283)
T ss_pred             CCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCC
Confidence            3445566666654     34578999999986655555667889999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          77 DLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      +|.+++........... .........+++..+..++.|++.|+.++|+++++||||||.||+++.++.+|++|||+++.
T Consensus        94 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~  173 (283)
T cd05091          94 DLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFRE  173 (283)
T ss_pred             cHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccc
Confidence            99999865432111100 01111223578888999999999999999999999999999999999999999999999875


Q ss_pred             CCcc-------cccceeeeeecccCCCccc
Q psy2674         156 TYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....       ...++..|+|||.+.+..+
T Consensus       174 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05091         174 VYAADYYKLMGNSLLPIRWMSPEAIMYGKF  203 (283)
T ss_pred             cccchheeeccCccCCccccCHHHHhcCCC
Confidence            4332       1223568999999866544

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG1152|consensus

Probab=99.95  E-value=2.1e-28  Score=188.26  Aligned_cols=163  Identities=19%  Similarity=0.245  Sum_probs=142.8

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCH--HHH-----HHHHHHHHHHhcCC---CcceeeEEeEEecCCccEEEE
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDD--EAL-----HEFKREIDLFCKLD---HAHVVKMIGICRDGDPHYLLL   70 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~-----~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~   70 (183)
                      ||.-+++.|..|.+..+..+|++|.+.+.+--  .+.     -.+-.||++|..++   |+||++++++|++++.+|+++
T Consensus       569 lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd~yyl~t  648 (772)
T KOG1152|consen  569 LGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDDYYYLET  648 (772)
T ss_pred             ccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCCeeEEEe
Confidence            67889999999999999999999999866421  111     13446999999996   999999999999999999999


Q ss_pred             eeC-CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEec
Q psy2674          71 EYT-DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL  149 (183)
Q Consensus        71 e~~-~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~d  149 (183)
                      |.. ++.+|.+++...+               .++|..+..++.|+..|+++||++||+|||||-+|++++.+|-+|++|
T Consensus       649 e~hg~gIDLFd~IE~kp---------------~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klid  713 (772)
T KOG1152|consen  649 EVHGEGIDLFDFIEFKP---------------RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLID  713 (772)
T ss_pred             cCCCCCcchhhhhhccC---------------ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEee
Confidence            975 4678999998875               499999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCc---ccccceeeeeecccCCCccc
Q psy2674         150 SGLSKDTYQ---KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       150 fg~a~~~~~---~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ||.|....+   +.+.||-.|+|||++.|.+|
T Consensus       714 fgsaa~~ksgpfd~f~gtv~~aapevl~g~~y  745 (772)
T KOG1152|consen  714 FGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKY  745 (772)
T ss_pred             ccchhhhcCCCcceeeeeccccchhhhCCCcc
Confidence            999875554   35788999999999998777

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.95  E-value=1.2e-26  Score=170.55  Aligned_cols=163  Identities=21%  Similarity=0.319  Sum_probs=135.9

Q ss_pred             CCCCCceeeeccCCCCcc---eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTS---VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |...++.+|++....+++   .|++|.+....+......+..|+..++.++||||+++.+++.+++..++++||+++++|
T Consensus        13 g~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L   92 (269)
T cd05065          13 GAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGAL   92 (269)
T ss_pred             cCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcH
Confidence            455677888887766654   69999987665566667899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++++|||++.....
T Consensus        93 ~~~l~~~~~--------------~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~  158 (269)
T cd05065          93 DSFLRQNDG--------------QFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  158 (269)
T ss_pred             HHHHhhCCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCcccccccc
Confidence            998876432              478899999999999999999999999999999999999999999999999875432


Q ss_pred             cc----c---cc---eeeeeecccCCCccc
Q psy2674         159 KE----Y---YK---YRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~----~---~~---~~~~~~pe~~~~~~~  178 (183)
                      ..    .   .+   +..|+|||.+.+..+
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~  188 (269)
T cd05065         159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKF  188 (269)
T ss_pred             CccccccccccCCCcceeecCHhHhccCcc
Confidence            21    1   11   346999999876554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=1.7e-26  Score=171.18  Aligned_cols=161  Identities=23%  Similarity=0.364  Sum_probs=132.8

Q ss_pred             CCCCceeeecc----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCC
Q psy2674           3 LIPNARGLKAS----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWG   76 (183)
Q Consensus         3 ~~~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~   76 (183)
                      --.++.||.+.    ...++..||+|.+...........+.+|+++++.++|+|++++.+++...  ...++++||++++
T Consensus        14 ~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~   93 (284)
T cd05079          14 EGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSG   93 (284)
T ss_pred             CCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCC
Confidence            34556676654    46678999999987665555566889999999999999999999998775  5688999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++.....              .+++..++.++.|++.++.+||++|++|+||+|+||+++.++.++|+|||++...
T Consensus        94 ~L~~~l~~~~~--------------~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05079          94 SLKEYLPRNKN--------------KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI  159 (284)
T ss_pred             CHHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCcccccc
Confidence            99999865432              4788999999999999999999999999999999999999999999999998754


Q ss_pred             Ccc--------cccceeeeeecccCCCcc
Q psy2674         157 YQK--------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       157 ~~~--------~~~~~~~~~~pe~~~~~~  177 (183)
                      ...        ...++..|+|||++.+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~  188 (284)
T cd05079         160 ETDKEYYTVKDDLDSPVFWYAPECLIQSK  188 (284)
T ss_pred             ccCccceeecCCCCCCccccCHHHhccCC
Confidence            332        223345689999987654

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=3.8e-27  Score=175.02  Aligned_cols=163  Identities=20%  Similarity=0.308  Sum_probs=128.7

Q ss_pred             CCCCCceeeeccCCC-CcceEEEeeccCCC-CHHHHHHHHHHHHHHhcC---CCcceeeEEeEEec-----CCccEEEEe
Q psy2674           2 SLIPNARGLKASDPQ-DTSVLMAKSLVHSK-DDEALHEFKREIDLFCKL---DHAHVVKMIGICRD-----GDPHYLLLE   71 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~-----~~~~~lv~e   71 (183)
                      |--.++.||++.+.. ++..||+|.+.... .......+.+|+..++.+   +||||+++++++..     ....++++|
T Consensus        10 g~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e   89 (290)
T cd07862          10 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE   89 (290)
T ss_pred             ccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEc
Confidence            456778899998754 57889999886332 222223456677776665   69999999999852     346889999


Q ss_pred             eCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEeccc
Q psy2674          72 YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG  151 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg  151 (183)
                      +++ ++|.+++.....             ..+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||
T Consensus        90 ~~~-~~l~~~~~~~~~-------------~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg  155 (290)
T cd07862          90 HVD-QDLTTYLDKVPE-------------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG  155 (290)
T ss_pred             cCC-CCHHHHHHhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence            997 799998875432             247889999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcc----cccceeeeeecccCCCccc
Q psy2674         152 LSKDTYQK----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       152 ~a~~~~~~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      ++......    ...++.+|+|||++.+..+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (290)
T cd07862         156 LARIYSFQMALTSVVVTLWYRAPEVLLQSSY  186 (290)
T ss_pred             ceEeccCCcccccccccccccChHHHhCCCC
Confidence            98754332    3456889999999876554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.95  E-value=1.8e-26  Score=169.70  Aligned_cols=164  Identities=27%  Similarity=0.447  Sum_probs=131.8

Q ss_pred             CCCCCceeeecc--CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKAS--DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++.  +..++..+++|.+...........+.+|+..++.++||||+++++.+.+....+++|||+++++|.
T Consensus         4 g~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~   83 (269)
T cd05087           4 GNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLK   83 (269)
T ss_pred             cccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHH
Confidence            445667777775  345677899999875554444457889999999999999999999999989999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++......          .....++..+..++.|++.++.|||+.+++|+||||+||+++.++.++++|||++......
T Consensus        84 ~~l~~~~~~----------~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~  153 (269)
T cd05087          84 GYLRSCRKA----------ELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE  153 (269)
T ss_pred             HHHHHhhhc----------ccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc
Confidence            998754221          0113566778889999999999999999999999999999999999999999998754332


Q ss_pred             -------cccceeeeeecccCCC
Q psy2674         160 -------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 -------~~~~~~~~~~pe~~~~  175 (183)
                             ...++..|+|||++.+
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~  176 (269)
T cd05087         154 DYYVTPDQLWVPLRWIAPELVDE  176 (269)
T ss_pred             ceeecCCCcCCcccccCHhHhcc
Confidence                   2334567999999764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0604|consensus

Probab=99.95  E-value=2.3e-28  Score=175.31  Aligned_cols=159  Identities=16%  Similarity=0.291  Sum_probs=134.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC----CccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG----DPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~----~~~~lv~e~~~~~   76 (183)
                      |.--.++|.-|.+..+++.+|+|++...      ....+|+++--+. .|+|||++++++++.    .-+.+|||.++||
T Consensus        71 G~GinGkV~~C~~k~T~ekfALKvL~Ds------~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGG  144 (400)
T KOG0604|consen   71 GAGINGKVVQCVHKRTQEKFALKVLLDS------PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGG  144 (400)
T ss_pred             ccccCCceEEEEeccchhhhHHHHHhcC------HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccch
Confidence            5556788999999999999999998622      2567788865555 799999999998752    3467999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec---cCCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~---~~~~~ki~dfg~a  153 (183)
                      .|.+.+...+.             ..+++..+..++.||+.|+.|||+.+|.|||+||+|+|+.   .+..+|++|||||
T Consensus       145 eLfsriq~~g~-------------~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFA  211 (400)
T KOG0604|consen  145 ELFSRIQDRGD-------------QAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFA  211 (400)
T ss_pred             HHHHHHHHccc-------------ccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccc
Confidence            99999998865             3699999999999999999999999999999999999995   5677999999999


Q ss_pred             CCCCcc----cccceeeeeecccCCCcccc
Q psy2674         154 KDTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +.....    .-+-|++|.|||++.-..||
T Consensus       212 K~t~~~~~L~TPc~TPyYvaPevlg~eKyd  241 (400)
T KOG0604|consen  212 KETQEPGDLMTPCFTPYYVAPEVLGPEKYD  241 (400)
T ss_pred             cccCCCccccCCcccccccCHHHhCchhcC
Confidence            976643    33558999999999877775

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.95  E-value=7.9e-27  Score=171.36  Aligned_cols=157  Identities=20%  Similarity=0.263  Sum_probs=136.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.+|++.+..+++.+|+|.+...... ....+.+|+.+++.++||||+++++.+..++..++++||+++++|.++
T Consensus        18 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~   96 (267)
T cd06645          18 GSGTYGDVYKARNVNTGELAAIKVIKLEPGE-DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDI   96 (267)
T ss_pred             CCCCCeEEEEEEEcCCCcEEEEEEEecCchh-HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHH
Confidence            4566788999999999999999998754333 234678899999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +...+               .+++..++.++.|++.++.|||++|++|+||+|+||+++.++.++|+|||++.....   
T Consensus        97 ~~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06645          97 YHVTG---------------PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA  161 (267)
T ss_pred             HHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence            86653               488999999999999999999999999999999999999999999999999864432   


Q ss_pred             --ccccceeeeeecccCC
Q psy2674         159 --KEYYKYRWVICSNIAE  174 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~  174 (183)
                        ....++..|+|||++.
T Consensus       162 ~~~~~~~~~~y~aPE~~~  179 (267)
T cd06645         162 KRKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             ccccccCcccccChhhhc
Confidence              2446788999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.95  E-value=8.7e-27  Score=176.10  Aligned_cols=158  Identities=13%  Similarity=0.111  Sum_probs=132.3

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHH
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL   83 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   83 (183)
                      .++.|+++....+++.||+|.+.... .....+.+.+|+++++.++||||+++++++.+++..++++||+++++|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~   91 (327)
T cd08227          12 DLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC   91 (327)
T ss_pred             ceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHH
Confidence            45678999999999999999997442 34445577889999999999999999999999999999999999999999987


Q ss_pred             hhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-----
Q psy2674          84 ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-----  158 (183)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-----  158 (183)
                      ....             ..+++..++.++.|++.||.|||+++++||||||+||+++.++.+++.||+.+.....     
T Consensus        92 ~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~  158 (327)
T cd08227          92 THFM-------------DGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL  158 (327)
T ss_pred             hhcc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence            6422             1478899999999999999999999999999999999999999999999976432211     


Q ss_pred             -------ccccceeeeeecccCCC
Q psy2674         159 -------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 -------~~~~~~~~~~~pe~~~~  175 (183)
                             ....++..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~  182 (327)
T cd08227         159 RVVHDFPKYSVKVLPWLSPEVLQQ  182 (327)
T ss_pred             cccccccccccceecccChHHhhc
Confidence                   11234567999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.95  E-value=3.2e-26  Score=169.61  Aligned_cols=176  Identities=27%  Similarity=0.387  Sum_probs=136.5

Q ss_pred             CCCCceeeecc----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           3 LIPNARGLKAS----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         3 ~~~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      --.++.||++.    ...++..+++|.+...........+.+|+++++.++|+||+++.+++..++..+++|||+++++|
T Consensus        15 ~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L   94 (283)
T cd05090          15 ECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDL   94 (283)
T ss_pred             ccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcH
Confidence            34556677665    34567899999998655555556788999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          79 KQFLLATRKDSKDKS--GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      .+++...........  .........+++...+.++.|++.++.|||+++++|+||+|+||+++.++.++++|||++...
T Consensus        95 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~  174 (283)
T cd05090          95 HEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREI  174 (283)
T ss_pred             HHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccc
Confidence            999865432110000  000111234788889999999999999999999999999999999999999999999999754


Q ss_pred             Ccc-------cccceeeeeecccCCCccc
Q psy2674         157 YQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...       ...++..|+|||.+.+..+
T Consensus       175 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  203 (283)
T cd05090         175 YSADYYRVQPKSLLPIRWMPPEAIMYGKF  203 (283)
T ss_pred             cCCcceecccCCCccceecChHHhccCCC
Confidence            332       2233557999999876544

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.95  E-value=8.5e-27  Score=171.11  Aligned_cols=166  Identities=22%  Similarity=0.276  Sum_probs=139.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC--CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH--SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++....++..+|+|.+..  ..+......+.+|+++++.++|||++++++.+.+.+..++++||+++++|.
T Consensus        11 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   90 (267)
T cd08228          11 GRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLS   90 (267)
T ss_pred             ccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHH
Confidence            445677899999999999999998763  234455567889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....           ....+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++++|||++......
T Consensus        91 ~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~  159 (267)
T cd08228          91 QMIKYFKK-----------QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             HHHHHhhh-----------ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence            88865422           1124788899999999999999999999999999999999999999999999998765432


Q ss_pred             -----cccceeeeeecccCCCccc
Q psy2674         160 -----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~~~  178 (183)
                           ...++..|+|||.+.+..+
T Consensus       160 ~~~~~~~~~~~~~~aPE~~~~~~~  183 (267)
T cd08228         160 TTAAHSLVGTPYYMSPERIHENGY  183 (267)
T ss_pred             hHHHhcCCCCccccChhhhccCCC
Confidence                 2456778999999876544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.95  E-value=1.1e-26  Score=173.76  Aligned_cols=163  Identities=25%  Similarity=0.377  Sum_probs=133.9

Q ss_pred             CCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           3 LIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         3 ~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      ...++.||++.     ...++..+|+|.+.........+.+.+|+++++.+ +|+||+++++.+...+..++++||+.++
T Consensus        45 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~  124 (302)
T cd05055          45 AGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYG  124 (302)
T ss_pred             ccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCC
Confidence            34455666554     35567799999987655555566789999999999 8999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++.....             ..+++..+..++.+++.++.|||+++++|+||+|+||+++.++.++++|||++...
T Consensus       125 ~L~~~i~~~~~-------------~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~  191 (302)
T cd05055         125 DLLNFLRRKRE-------------SFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDI  191 (302)
T ss_pred             cHHHHHHhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence            99999875422             13788999999999999999999999999999999999999999999999999855


Q ss_pred             Cccc-------ccceeeeeecccCCCccc
Q psy2674         157 YQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ....       ..++..|+|||.+.+..+
T Consensus       192 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  220 (302)
T cd05055         192 MNDSNYVVKGNARLPVKWMAPESIFNCVY  220 (302)
T ss_pred             cCCCceeecCCCCcccccCCHhhhccCCC
Confidence            4321       233567999999876544

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=1.3e-27  Score=174.63  Aligned_cols=158  Identities=22%  Similarity=0.340  Sum_probs=137.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHH-HHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-++|.||++.+..+++.+|+|.+......... ....+|+..++.++|+||+++.+++.+....++++|++++++|.+
T Consensus         8 g~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~   87 (260)
T PF00069_consen    8 GSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQD   87 (260)
T ss_dssp             EEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHH
T ss_pred             EeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence            4567899999999999999999999866443332 344679999999999999999999999999999999999889999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC----
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT----  156 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~----  156 (183)
                      ++....               .+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++|+|||.+...    
T Consensus        88 ~l~~~~---------------~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~  152 (260)
T PF00069_consen   88 YLQKNK---------------PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENN  152 (260)
T ss_dssp             HHHHHS---------------SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTT
T ss_pred             cccccc---------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            998443               5899999999999999999999999999999999999999999999999998742    


Q ss_pred             -CcccccceeeeeecccCC
Q psy2674         157 -YQKEYYKYRWVICSNIAE  174 (183)
Q Consensus       157 -~~~~~~~~~~~~~pe~~~  174 (183)
                       ......++.+|+|||+..
T Consensus       153 ~~~~~~~~~~~y~aPE~~~  171 (260)
T PF00069_consen  153 ENFNPFVGTPEYMAPEVLQ  171 (260)
T ss_dssp             SEBSSSSSSGGGSCHHHHT
T ss_pred             ccccccccccccccccccc
Confidence             123456688999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.95  E-value=1e-26  Score=174.96  Aligned_cols=162  Identities=22%  Similarity=0.265  Sum_probs=132.4

Q ss_pred             CCCCCceeeeccCCCCcc----eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTS----VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |--.++.||++....++.    .||+|.+.........+.+.+|+..++.++|+||+++++++... ..++++|++.+|+
T Consensus        16 g~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~v~e~~~~g~   94 (316)
T cd05108          16 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGC   94 (316)
T ss_pred             ecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-CceeeeecCCCCC
Confidence            445667888887554444    48999987655555666889999999999999999999998764 5789999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+.....              .+++...+.++.|++.||.|||+++++||||||+||+++.++.++|+|||++....
T Consensus        95 l~~~l~~~~~--------------~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~  160 (316)
T cd05108          95 LLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  160 (316)
T ss_pred             HHHHHHhccc--------------cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEcccccccccc
Confidence            9999876432              47788899999999999999999999999999999999999999999999998654


Q ss_pred             ccc-------ccceeeeeecccCCCccc
Q psy2674         158 QKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ...       ...+..|++||.+.+..+
T Consensus       161 ~~~~~~~~~~~~~~~~y~apE~~~~~~~  188 (316)
T cd05108         161 ADEKEYHAEGGKVPIKWMALESILHRIY  188 (316)
T ss_pred             CCCcceeccCCccceeecChHHhccCCC
Confidence            321       122456999999876554

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.95  E-value=1.8e-26  Score=168.82  Aligned_cols=162  Identities=25%  Similarity=0.340  Sum_probs=131.1

Q ss_pred             CCCCCceeeeccC--CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASD--PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||.+..  ..++..||+|++.........+.+.+|+.++++++|+||+++++++. ....++++||+++++|.
T Consensus         4 g~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~   82 (257)
T cd05115           4 GSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLN   82 (257)
T ss_pred             CCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHH
Confidence            4455667776644  34566799999986655555667899999999999999999999885 45789999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++++|||++......
T Consensus        83 ~~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  148 (257)
T cd05115          83 KFLSGKKD--------------EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             HHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCC
Confidence            98865322              5889999999999999999999999999999999999999999999999998754332


Q ss_pred             c-----c---cceeeeeecccCCCccc
Q psy2674         160 E-----Y---YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ~-----~---~~~~~~~~pe~~~~~~~  178 (183)
                      .     .   ..+..|+|||.+.+..+
T Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~  175 (257)
T cd05115         149 DSYYKARSAGKWPLKWYAPECINFRKF  175 (257)
T ss_pred             ccceeccCCCCCCcccCCHHHHccCCC
Confidence            1     1   11356999998876543

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.95  E-value=1.2e-26  Score=170.25  Aligned_cols=162  Identities=22%  Similarity=0.368  Sum_probs=136.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--..+.+|++....++..+++|.+...  ......+.+|++.++.++|+||+++++++..++..++++||+++++|.++
T Consensus        15 g~g~~~~v~~~~~~~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (263)
T cd05052          15 GGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY   92 (263)
T ss_pred             CCcccceEEEEEEecCCceEEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHH
Confidence            3345678899998899999999998643  22345788999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY  161 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~  161 (183)
                      +.....             ..+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++........
T Consensus        93 ~~~~~~-------------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~  159 (263)
T cd05052          93 LRECNR-------------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  159 (263)
T ss_pred             HHhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence            865432             2478889999999999999999999999999999999999999999999999886544321


Q ss_pred             ------cceeeeeecccCCCccc
Q psy2674         162 ------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       162 ------~~~~~~~~pe~~~~~~~  178 (183)
                            ..+..|+|||...+..+
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~  182 (263)
T cd05052         160 TAHAGAKFPIKWTAPESLAYNKF  182 (263)
T ss_pred             eccCCCCCccccCCHHHhccCCC
Confidence                  12456999999877554

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.95  E-value=1.5e-26  Score=168.79  Aligned_cols=164  Identities=14%  Similarity=0.215  Sum_probs=139.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-+.+.++.+....++..+++|.+... .+......+.+|+++++.++|+||+++++++.+.+..++++||+++++|.+
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~   88 (256)
T cd08221           9 GKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYD   88 (256)
T ss_pred             cccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHH
Confidence            3445677888888899999999998743 244455678899999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+.....             ..+++..+..++.|++.++.+||+.+++|+||+|+||+++.++.++|+|||++...... 
T Consensus        89 ~~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~  155 (256)
T cd08221          89 KIVRQKG-------------QLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY  155 (256)
T ss_pred             HHHhccc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence            9876421             24788999999999999999999999999999999999999999999999998755433 


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++..|.|||.+.+..+
T Consensus       156 ~~~~~~~~~~~y~ape~~~~~~~  178 (256)
T cd08221         156 SMAETVVGTPYYMSPELCQGVKY  178 (256)
T ss_pred             ccccccCCCccccCHhhcCCCCC
Confidence                3556889999999877543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.95  E-value=3e-26  Score=177.26  Aligned_cols=177  Identities=25%  Similarity=0.378  Sum_probs=137.6

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |--+++.||++..     ...++.||+|++.........+.+.+|+.++..+. ||||+++++.+..++..++++||+++
T Consensus        46 G~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~  125 (401)
T cd05107          46 GSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRY  125 (401)
T ss_pred             cCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCC
Confidence            5566788888873     45677899999985544444557889999999996 99999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCC---------------------------------------------------------------
Q psy2674          76 GDLKQFLLATRKDSKDK---------------------------------------------------------------   92 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~---------------------------------------------------------------   92 (183)
                      |+|.+++..........                                                               
T Consensus       126 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (401)
T cd05107         126 GDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIE  205 (401)
T ss_pred             CcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhh
Confidence            99999997643200000                                                               


Q ss_pred             --------------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          93 --------------------SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        93 --------------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                                          ..........+++..++.++.|++.|+.|||+.+++|+||||+||+++..+.++++|||+
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGl  285 (401)
T cd05107         206 SSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGL  285 (401)
T ss_pred             ccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCc
Confidence                                000001223467788899999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc-------cccceeeeeecccCCCccc
Q psy2674         153 SKDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       153 a~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      +......       ..+++..|+|||.+.+..+
T Consensus       286 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  318 (401)
T cd05107         286 ARDIMRDSNYISKGSTFLPLKWMAPESIFNNLY  318 (401)
T ss_pred             ceecccccccccCCCcCCCCceeChHHhcCCCC
Confidence            9754321       2344667999999877554

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>PHA02988 hypothetical protein; Provisional

Probab=99.95  E-value=7.9e-27  Score=173.10  Aligned_cols=154  Identities=18%  Similarity=0.228  Sum_probs=128.1

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEec----CCccEEEEeeCCCCCH
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRD----GDPHYLLLEYTDWGDL   78 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~L   78 (183)
                      ..+.+|++..  +|+.||+|.+....  .....+.+.+|+.+++.++||||+++++++.+    ....++++||+++|+|
T Consensus        32 ~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L  109 (283)
T PHA02988         32 DQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYL  109 (283)
T ss_pred             CceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcH
Confidence            4456777655  78899999987432  33335678899999999999999999999876    3467899999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      .+++....               .+++...+.++.+++.|+.+||+ .+++||||+|+||+++.++.+|++|||+++...
T Consensus       110 ~~~l~~~~---------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~  174 (283)
T PHA02988        110 REVLDKEK---------------DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILS  174 (283)
T ss_pred             HHHHhhCC---------------CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhc
Confidence            99997643               47788899999999999999998 499999999999999999999999999988544


Q ss_pred             cc--cccceeeeeecccCCC
Q psy2674         158 QK--EYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~~--~~~~~~~~~~pe~~~~  175 (183)
                      ..  ...++..|+|||++.+
T Consensus       175 ~~~~~~~~~~~y~aPE~~~~  194 (283)
T PHA02988        175 SPPFKNVNFMVYFSYKMLND  194 (283)
T ss_pred             cccccccCcccccCHHHhhh
Confidence            33  3346788999999865

>KOG0986|consensus

Probab=99.95  E-value=1.9e-28  Score=183.92  Aligned_cols=165  Identities=16%  Similarity=0.170  Sum_probs=144.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |-..++.|+-|.-..+|+-+|.|.+.+++-  ........+|-+++.+++.++||.+--.|+..+.+++|+..|.||+|.
T Consensus       194 GkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLk  273 (591)
T KOG0986|consen  194 GKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLK  273 (591)
T ss_pred             ecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCcee
Confidence            445677788888889999999999875432  222336678999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      =++...+.             +.+++..++.++++|+.|+++||+.+||.||+||.|||+|+.|.++|+|+|+|..+..+
T Consensus       274 fHiyn~g~-------------~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  274 FHIYNHGN-------------PGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEeeccCC-------------CCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence            88877754             46999999999999999999999999999999999999999999999999999977664


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...||.+|||||++.+..||
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne~Y~  364 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNEVYD  364 (591)
T ss_pred             CccccccCcccccCHHHHcCCccc
Confidence                45789999999999998775

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.95  E-value=1.6e-26  Score=169.54  Aligned_cols=166  Identities=24%  Similarity=0.285  Sum_probs=139.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC--CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH--SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-..+.+|++....++..+++|.+..  ..+....+.+.+|++.++.++|++++++++.+.+.+..++++||+++++|.
T Consensus        11 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   90 (267)
T cd08224          11 GKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLS   90 (267)
T ss_pred             ccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHH
Confidence            445677899999999999999998863  233444668899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....           ....+++..++.++.+++.++.+||+.|++|+||+|+||+++.++.++++|||++......
T Consensus        91 ~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~  159 (267)
T cd08224          91 RMIKHFKK-----------QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             HHHHHhcc-----------cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence            98875421           1124788999999999999999999999999999999999999999999999998754332


Q ss_pred             -----cccceeeeeecccCCCccc
Q psy2674         160 -----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~~~  178 (183)
                           ...++..|+|||.+.+..+
T Consensus       160 ~~~~~~~~~~~~y~apE~~~~~~~  183 (267)
T cd08224         160 TTAAHSLVGTPYYMSPERIHENGY  183 (267)
T ss_pred             CcccceecCCccccCHHHhccCCC
Confidence                 2456778999999877654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.95  E-value=2e-26  Score=170.17  Aligned_cols=172  Identities=22%  Similarity=0.388  Sum_probs=133.0

Q ss_pred             CCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           3 LIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         3 ~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      --..+.||.+..     ..++..+|+|.+...........+.+|+.+++.++|+||+++++++.+.+..++++||+++++
T Consensus        16 ~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~   95 (277)
T cd05062          16 QGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD   95 (277)
T ss_pred             cccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCC
Confidence            334556666543     345678999998754444445578899999999999999999999998899999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.........     ......++...+..++.|++.++.|||+.+++|+||+|+||+++.++.++++|||++....
T Consensus        96 L~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~  170 (277)
T cd05062          96 LKSYLRSLRPEMEN-----NPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY  170 (277)
T ss_pred             HHHHHHHcCccccc-----cccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccC
Confidence            99998764321000     0011245778889999999999999999999999999999999999999999999987543


Q ss_pred             ccc-------ccceeeeeecccCCCcccc
Q psy2674         158 QKE-------YYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~~-------~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...       ..++..|+|||++.+..++
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  199 (277)
T cd05062         171 ETDYYRKGGKGLLPVRWMSPESLKDGVFT  199 (277)
T ss_pred             CcceeecCCCCccCHhhcChhHhhcCCcC
Confidence            321       1235679999998776543

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.95  E-value=3.2e-26  Score=171.26  Aligned_cols=177  Identities=23%  Similarity=0.382  Sum_probs=136.8

Q ss_pred             CCCCCceeeecc-------CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKAS-------DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~-------~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |--+++.||.+.       ...++..+|+|.+...........+.+|+..++.+ +|+||+++++++..++..++++||+
T Consensus        24 g~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~  103 (304)
T cd05101          24 GEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA  103 (304)
T ss_pred             eccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecC
Confidence            344566677664       23456789999987554455566889999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSG-SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      .+++|.+++............ ........++...++.++.|++.|+.|||++|++|+||||+||+++.++.++|+|||+
T Consensus       104 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~  183 (304)
T cd05101         104 SKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL  183 (304)
T ss_pred             CCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCcc
Confidence            999999999875432111110 0111223578888999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         153 SKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       153 a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ++......       ..++..|+|||++.+..+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  216 (304)
T cd05101         184 ARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVY  216 (304)
T ss_pred             ceecccccccccccCCCCCceeeCchhhccCCC
Confidence            98554321       122457999999877544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.95  E-value=1.2e-26  Score=174.57  Aligned_cols=165  Identities=19%  Similarity=0.258  Sum_probs=129.0

Q ss_pred             CCCCCceeeeccCC--CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDP--QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~   77 (183)
                      |--.++.||++.+.  .+++.+|+|.+......   ..+.+|+++++.++||||+++.+.+..  +...++++||++ ++
T Consensus        10 G~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~   85 (317)
T cd07868          10 GRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS---MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HD   85 (317)
T ss_pred             ccCCCeEEEEEEEccCCCCceEEEEEECCCCCc---HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-CC
Confidence            55567889988753  57889999998744322   246789999999999999999999865  345789999987 78


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe----ccCCceEEecccCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI----SSDLSVKISLSGLS  153 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~----~~~~~~ki~dfg~a  153 (183)
                      |.+++........      ......+++..+..++.|++.|+.|||+++++||||||+|||+    +..+.+||+|||++
T Consensus        86 l~~~~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07868          86 LWHIIKFHRASKA------NKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             HHHHHHhcccccc------cCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence            8888765422110      0111247889999999999999999999999999999999999    45678999999999


Q ss_pred             CCCCc--------ccccceeeeeecccCCCc
Q psy2674         154 KDTYQ--------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       154 ~~~~~--------~~~~~~~~~~~pe~~~~~  176 (183)
                      +....        ....++++|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  190 (317)
T cd07868         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGA  190 (317)
T ss_pred             eccCCCCccccccCCccccccccCCHHHcCC
Confidence            75432        235668899999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.95  E-value=1.6e-26  Score=168.66  Aligned_cols=171  Identities=31%  Similarity=0.486  Sum_probs=141.6

Q ss_pred             CCCCCceeeeccCCCC---cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQD---TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.+|++.....   +..+++|.+.........+.+.+|+..++.++|+|++++++++.+....++++||+++++|
T Consensus         4 g~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   83 (262)
T cd00192           4 GEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDL   83 (262)
T ss_pred             ccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcH
Confidence            4556778888888766   9999999998665554567889999999999999999999999998999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.......      .......+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++++|||.+.....
T Consensus        84 ~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  157 (262)
T cd00192          84 LDYLRKSRPVF------PSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD  157 (262)
T ss_pred             HHHHhhccccc------cccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence            99987752100      000012589999999999999999999999999999999999999999999999999986654


Q ss_pred             c-------cccceeeeeecccCCCccc
Q psy2674         159 K-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      .       ...++..|+|||...+..+
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (262)
T cd00192         158 DDYYRKKTGGKLPIRWMAPESLKDGIF  184 (262)
T ss_pred             ccccccccCCCcCccccCHHHhccCCc
Confidence            3       2344678999999876443

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.95  E-value=2.6e-26  Score=168.73  Aligned_cols=163  Identities=22%  Similarity=0.285  Sum_probs=133.7

Q ss_pred             CCCCCceeeeccCCCC---cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQD---TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++....+   +..+|+|.+.........+.+.+|+..++.++||||+++.+++.+++..++++||+++++|
T Consensus        13 g~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   92 (267)
T cd05066          13 GAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL   92 (267)
T ss_pred             cccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCH
Confidence            4445677787765433   4479999987555455566889999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++++|||++.....
T Consensus        93 ~~~~~~~~~--------------~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~  158 (267)
T cd05066          93 DAFLRKHDG--------------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLED  158 (267)
T ss_pred             HHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence            999876432              478888999999999999999999999999999999999999999999999986543


Q ss_pred             ccc--------cceeeeeecccCCCccc
Q psy2674         159 KEY--------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~~--------~~~~~~~~pe~~~~~~~  178 (183)
                      ...        ..+..|++||.+.+..+
T Consensus       159 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~  186 (267)
T cd05066         159 DPEAAYTTRGGKIPIRWTAPEAIAYRKF  186 (267)
T ss_pred             ccceeeecCCCccceeecCHhHhccCcc
Confidence            211        11346999999877554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.95  E-value=3.2e-26  Score=166.55  Aligned_cols=161  Identities=27%  Similarity=0.372  Sum_probs=134.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||++.. .++..+|+|.+...........+.+|++.++.++|+||+++++++...+..++++||+++++|.+.
T Consensus         4 g~g~~g~vy~~~~-~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   82 (250)
T cd05085           4 GKGNFGEVFKGTL-KDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSF   82 (250)
T ss_pred             CCCCCceEEEEEe-cCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHH
Confidence            4556778898874 468899999987655555556788999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....              .+++..++.++.+++.++.++|+++++|+||+|+||+++.++.++++|||++....... 
T Consensus        83 ~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  148 (250)
T cd05085          83 LRKKKD--------------ELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY  148 (250)
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc
Confidence            865422              47889999999999999999999999999999999999999999999999987543321 


Q ss_pred             -----ccceeeeeecccCCCcc
Q psy2674         161 -----YYKYRWVICSNIAEGRR  177 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~  177 (183)
                           ...+..|+|||++.+..
T Consensus       149 ~~~~~~~~~~~y~aPE~~~~~~  170 (250)
T cd05085         149 SSSGLKQIPIKWTAPEALNYGR  170 (250)
T ss_pred             ccCCCCCCcccccCHHHhccCC
Confidence                 12245699999987654

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.95  E-value=1e-26  Score=171.69  Aligned_cols=161  Identities=18%  Similarity=0.299  Sum_probs=138.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++.+..++..+|+|.+.........+.+.+|+++++.++|+||+++++.+..++..++++||+++++|.+.
T Consensus        13 ~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (277)
T cd06642          13 GKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDL   92 (277)
T ss_pred             cCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHH
Confidence            44567889999988999999999987554445566889999999999999999999999999999999999999999988


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++..+..++.+++.++.|||+++++|+||+|+||+++.++.++++|||++......  
T Consensus        93 ~~~~----------------~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06642          93 LKPG----------------PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             hhcC----------------CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch
Confidence            7532                4788899999999999999999999999999999999999999999999998755432  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||.+.+..+
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~  178 (277)
T cd06642         157 KRNTFVGTPFWMAPEVIKQSAY  178 (277)
T ss_pred             hhhcccCcccccCHHHhCcCCC
Confidence               2345778999999887654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.95  E-value=3.1e-26  Score=168.17  Aligned_cols=163  Identities=22%  Similarity=0.307  Sum_probs=135.7

Q ss_pred             CCCCCceeeeccCCC---CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQ---DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |-..++.||++....   +...+|+|.+...........+.+|+..++.++|+||+++++++.+.+..++++|++++++|
T Consensus        13 g~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L   92 (266)
T cd05033          13 GGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSL   92 (266)
T ss_pred             cCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCH
Confidence            445667788776543   35689999987666666667889999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++++|||++.....
T Consensus        93 ~~~~~~~~~--------------~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~  158 (266)
T cd05033          93 DKFLRENDG--------------KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED  158 (266)
T ss_pred             HHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence            999876432              478899999999999999999999999999999999999999999999999986541


Q ss_pred             -cc------ccceeeeeecccCCCccc
Q psy2674         159 -KE------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -~~------~~~~~~~~~pe~~~~~~~  178 (183)
                       ..      ...+..|+|||...+..+
T Consensus       159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~  185 (266)
T cd05033         159 SEATYTTKGGKIPIRWTAPEAIAYRKF  185 (266)
T ss_pred             cccceeccCCCCCccccChhhhccCCC
Confidence             11      122457999999876544

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.95  E-value=4.4e-26  Score=168.85  Aligned_cols=160  Identities=23%  Similarity=0.335  Sum_probs=130.5

Q ss_pred             CCCCceeee----ccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCC
Q psy2674           3 LIPNARGLK----ASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWG   76 (183)
Q Consensus         3 ~~~~~~~~~----~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~   76 (183)
                      --.++.|+.    +....++..||+|.+...........+.+|++.++.++||||+++.+++...  ...+++|||++++
T Consensus        14 ~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~   93 (283)
T cd05080          14 EGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLG   93 (283)
T ss_pred             cCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCC
Confidence            344566643    3456788899999987555444556788999999999999999999988653  3578999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++...                .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++++|||++...
T Consensus        94 ~l~~~~~~~----------------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~  157 (283)
T cd05080          94 SLRDYLPKH----------------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV  157 (283)
T ss_pred             CHHHHHHHc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence            999988653                4889999999999999999999999999999999999999999999999998855


Q ss_pred             Cccc--------ccceeeeeecccCCCccc
Q psy2674         157 YQKE--------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~~--------~~~~~~~~~pe~~~~~~~  178 (183)
                      ....        ..++..|+|||.+.+..+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  187 (283)
T cd05080         158 PEGHEYYRVREDGDSPVFWYAVECLKENKF  187 (283)
T ss_pred             CCcchhhccCCCCCCCceeeCHhHhcccCC
Confidence            4321        223556899999876543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.95  E-value=3.6e-26  Score=166.37  Aligned_cols=162  Identities=24%  Similarity=0.347  Sum_probs=137.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++.... ++.|++|.+...........+.+|+++++.++|+||+++++++.+.+..++++|++++++|.++
T Consensus         4 g~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~   82 (251)
T cd05041           4 GKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTF   82 (251)
T ss_pred             ccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHH
Confidence            556778899998877 9999999987555545566889999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....              .+++..++.++.+++.++.+||+++++|+||+|+||+++.++.++|+|||++....... 
T Consensus        83 l~~~~~--------------~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~  148 (251)
T cd05041          83 LRKKKN--------------RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY  148 (251)
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcc
Confidence            865432              47888999999999999999999999999999999999999999999999987554221 


Q ss_pred             ------ccceeeeeecccCCCccc
Q psy2674         161 ------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 ------~~~~~~~~~pe~~~~~~~  178 (183)
                            ...+..|+|||.+.+..+
T Consensus       149 ~~~~~~~~~~~~y~~PE~~~~~~~  172 (251)
T cd05041         149 TVSDGLKQIPIKWTAPEALNYGRY  172 (251)
T ss_pred             eeccccCcceeccCChHhhccCCC
Confidence                  122446999999876554

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.95  E-value=2.3e-26  Score=169.93  Aligned_cols=161  Identities=20%  Similarity=0.305  Sum_probs=138.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|.+.+..++..+|+|.+...........+.+|+.+++.++|+|++++++.+.+....++++||+++++|.++
T Consensus        13 g~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (277)
T cd06640          13 GKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDL   92 (277)
T ss_pred             ccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHH
Confidence            45567889999999999999999987554445556889999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++..+..++.+++.++.++|+++++|+||+|+||+++.++.++++|||++......  
T Consensus        93 i~~~----------------~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          93 LRAG----------------PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             HhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc
Confidence            8542                4788889999999999999999999999999999999999999999999998754432  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++.+|.|||++.+..+
T Consensus       157 ~~~~~~~~~~y~apE~~~~~~~  178 (277)
T cd06640         157 KRNTFVGTPFWMAPEVIQQSAY  178 (277)
T ss_pred             ccccccCcccccCHhHhccCCC
Confidence               2345778999999876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.95  E-value=1.5e-26  Score=172.60  Aligned_cols=160  Identities=16%  Similarity=0.233  Sum_probs=137.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++.+..++..||+|.+....... .+.+.+|+.+++.++|+|++++++.+..++..++++||+++++|.++
T Consensus        28 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  106 (297)
T cd06656          28 GQGASGTVYTAIDIATGQEVAIKQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV  106 (297)
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEEEecCccch-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHH
Confidence            44567889999998999999999987443332 34688999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++..+..++.+++.++.+||+.+++|+||+|+||+++.++.++++|||++......  
T Consensus       107 ~~~~----------------~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656         107 VTET----------------CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             HHhC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence            8643                4788899999999999999999999999999999999999999999999998754332  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||.+.+..+
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~  192 (297)
T cd06656         171 KRSTMVGTPYWMAPEVVTRKAY  192 (297)
T ss_pred             CcCcccCCccccCHHHHcCCCC
Confidence               3456788999999877654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.95  E-value=1.8e-26  Score=169.46  Aligned_cols=158  Identities=19%  Similarity=0.253  Sum_probs=134.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++....+++.+|+|++...... ....+.+|+.+++.++|+||+++++.+..++..++++||+++++|.+.
T Consensus        18 g~g~~g~vy~~~~~~~~~~~aik~~~~~~~~-~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~   96 (267)
T cd06646          18 GSGTYGDVYKARNLHTGELAAVKIIKLEPGD-DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDI   96 (267)
T ss_pred             ecCCCeEEEEEEECCCCeEEEEEEEecCccc-hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHH
Confidence            3445678999999999999999998744322 234678899999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +....               .+++..+..++.|++.++.+||+.+++|+|++|.||+++.++.++|+|||++.....   
T Consensus        97 ~~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06646          97 YHVTG---------------PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA  161 (267)
T ss_pred             HHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeeccccc
Confidence            86543               478999999999999999999999999999999999999999999999999875432   


Q ss_pred             --ccccceeeeeecccCCC
Q psy2674         159 --KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~  175 (183)
                        ....++..|+|||++.+
T Consensus       162 ~~~~~~~~~~y~~PE~~~~  180 (267)
T cd06646         162 KRKSFIGTPYWMAPEVAAV  180 (267)
T ss_pred             ccCccccCccccCHhHccc
Confidence              23456788999999753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG4645|consensus

Probab=99.95  E-value=1.6e-28  Score=202.39  Aligned_cols=161  Identities=17%  Similarity=0.250  Sum_probs=142.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--++|+||.|.+..+|...|+|.+.-.. .......+.+|..++..++|||+++++++=.+.+..+|.||||++|+|.+
T Consensus      1244 g~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ 1323 (1509)
T KOG4645|consen 1244 GGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLAS 1323 (1509)
T ss_pred             CCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHH
Confidence            34578999999999999999999987333 23344577899999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+...+               ..++.....+..|++.|+.|||++|||||||||.||+++.+|.+|.+|||.|..+..+ 
T Consensus      1324 ll~~gr---------------i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1324 LLEHGR---------------IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred             HHHhcc---------------hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence            998764               4788888999999999999999999999999999999999999999999999865442 


Q ss_pred             --------cccceeeeeecccCCCcc
Q psy2674         160 --------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       160 --------~~~~~~~~~~pe~~~~~~  177 (183)
                              .+.||+-|||||++.|..
T Consensus      1389 ~~~~~el~~~~GT~~YMAPEvit~t~ 1414 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTK 1414 (1509)
T ss_pred             hcCCHHHHhhcCCchhcCchhhcccc
Confidence                    578899999999997744

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.95  E-value=1.7e-26  Score=172.33  Aligned_cols=160  Identities=16%  Similarity=0.236  Sum_probs=137.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++.+..++..+++|.+....... .+.+.+|+.+++.+.|+|++++.+.+.++...++++||+++++|.++
T Consensus        29 g~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~-~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~  107 (296)
T cd06654          29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV  107 (296)
T ss_pred             cCCCCeEEEEEEECCCCcEEEEEEEecCCcch-HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHH
Confidence            44567889999999999999999987544333 34688999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++..+..++.|++.++.+||+.+++|+||+|+||+++.++.++|+|||++......  
T Consensus       108 ~~~~----------------~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654         108 VTET----------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             HHhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence            8543                3778899999999999999999999999999999999999999999999998754332  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||.+.+..+
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~~~  193 (296)
T cd06654         172 KRSTMVGTPYWMAPEVVTRKAY  193 (296)
T ss_pred             ccCcccCCccccCHHHHcCCCC
Confidence               2456788999999877553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.95  E-value=4.1e-26  Score=169.48  Aligned_cols=172  Identities=22%  Similarity=0.397  Sum_probs=134.1

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--.++.||++..     ..++..||+|.+...........+.+|+..++.++|+|++++++.+.+.+..+++|||++++
T Consensus        15 g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g   94 (288)
T cd05061          15 GQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHG   94 (288)
T ss_pred             cCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCC
Confidence            4455677777643     24567899999875554444556889999999999999999999999989999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++.........     .......+...+..++.|++.|+.|||+++++|+||+|+||+++.++.++++|||+++..
T Consensus        95 ~L~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~  169 (288)
T cd05061          95 DLKSYLRSLRPEAEN-----NPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI  169 (288)
T ss_pred             CHHHHHHHhcccccc-----CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccc
Confidence            999999765321110     001124566788899999999999999999999999999999999999999999998854


Q ss_pred             Cccc-------ccceeeeeecccCCCccc
Q psy2674         157 YQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ....       ..++..|+|||.+.+..+
T Consensus       170 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~  198 (288)
T cd05061         170 YETDYYRKGGKGLLPVRWMAPESLKDGVF  198 (288)
T ss_pred             cccccccccCCCcccccccCHHHhccCCC
Confidence            3321       123456999999876554

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.95  E-value=9.3e-27  Score=172.43  Aligned_cols=162  Identities=19%  Similarity=0.285  Sum_probs=134.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.||++.+..++..||+|.+.... +......+.+|+.+++.++|+|++++++++.+++..++++||++ ++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~   87 (285)
T cd07861           9 GEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKK   87 (285)
T ss_pred             cccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHH
Confidence            44567789999999999999999986432 22233467889999999999999999999999999999999998 78888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+.....            ...+++..++.++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++...... 
T Consensus        88 ~~~~~~~------------~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  155 (285)
T cd07861          88 YLDSLPK------------GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV  155 (285)
T ss_pred             HHhcCCC------------CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence            8765421            125889999999999999999999999999999999999999999999999998744321 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ...++.+|+|||++.+.
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~  176 (285)
T cd07861         156 RVYTHEVVTLWYRAPEVLLGS  176 (285)
T ss_pred             ccccCCcccccccChHHhcCC
Confidence                23457889999987653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.95  E-value=7.8e-27  Score=173.15  Aligned_cols=163  Identities=21%  Similarity=0.319  Sum_probs=130.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcC---CCcceeeEEeEEec-----CCccEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKL---DHAHVVKMIGICRD-----GDPHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~-----~~~~~lv~e~   72 (183)
                      |.-..+.||++.+..+++.||+|.+..... ......+.+|++.++.+   +||||+++++++..     ....++++|+
T Consensus         9 g~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~   88 (288)
T cd07863           9 GVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEH   88 (288)
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEcc
Confidence            455678899999999999999999874321 11122455677766655   79999999998864     2357899999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++ ++|.+++.....             ..+++..++.++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||+
T Consensus        89 ~~-~~l~~~~~~~~~-------------~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~  154 (288)
T cd07863          89 VD-QDLRTYLDKVPP-------------PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGL  154 (288)
T ss_pred             cc-cCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCc
Confidence            98 689888865432             2488999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc----cccceeeeeecccCCCccc
Q psy2674         153 SKDTYQK----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       153 a~~~~~~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      +......    ...++..|+|||++.+..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  184 (288)
T cd07863         155 ARIYSCQMALTPVVVTLWYRAPEVLLQSTY  184 (288)
T ss_pred             cccccCcccCCCccccccccCchHhhCCCC
Confidence            9755432    3456888999999877554

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.95  E-value=7e-27  Score=182.94  Aligned_cols=158  Identities=15%  Similarity=0.189  Sum_probs=126.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--------CccEEEEeeC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--------DPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e~~   73 (183)
                      |.-.++.||++.+..+++.||+|.+.....     ...+|+.+++.++|+||+++.+++..+        ..++++|||+
T Consensus        75 G~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-----~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~  149 (440)
T PTZ00036         75 GNGSFGVVYEAICIDTSEKVAIKKVLQDPQ-----YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFI  149 (440)
T ss_pred             EeCCCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecC
Confidence            445678999999999999999998853321     345799999999999999998886432        1366899999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC-CceEEecccC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGL  152 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~-~~~ki~dfg~  152 (183)
                      + ++|.+.+.....           ....+++..++.++.|++.||.|||+++++||||||+||+++.+ +.+||+|||+
T Consensus       150 ~-~~l~~~~~~~~~-----------~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl  217 (440)
T PTZ00036        150 P-QTVHKYMKHYAR-----------NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS  217 (440)
T ss_pred             C-ccHHHHHHHHhh-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence            8 678777754321           11258899999999999999999999999999999999999855 5799999999


Q ss_pred             CCCCCc----ccccceeeeeecccCCCc
Q psy2674         153 SKDTYQ----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       153 a~~~~~----~~~~~~~~~~~pe~~~~~  176 (183)
                      |+....    ..+.++++|+|||++.+.
T Consensus       218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~  245 (440)
T PTZ00036        218 AKNLLAGQRSVSYICSRFYRAPELMLGA  245 (440)
T ss_pred             chhccCCCCcccCCCCcCccCHHHhcCC
Confidence            985433    245678999999998663

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.95  E-value=3.8e-26  Score=170.06  Aligned_cols=158  Identities=25%  Similarity=0.451  Sum_probs=128.8

Q ss_pred             CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCC
Q psy2674          17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG   96 (183)
Q Consensus        17 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~   96 (183)
                      .+..+|+|.+.........+.+.+|+++++.++|+|++++++++.+++..++++|++++++|.+++..........    
T Consensus        45 ~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~----  120 (296)
T cd05051          45 APVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGL----  120 (296)
T ss_pred             CceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccc----
Confidence            4467899998866666667788999999999999999999999999999999999999999999997654211100    


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-------ccceeeeee
Q psy2674          97 KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-------YYKYRWVIC  169 (183)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-------~~~~~~~~~  169 (183)
                      ......+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++++|||++.......       ..++..|+|
T Consensus       121 ~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~a  200 (296)
T cd05051         121 ACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMA  200 (296)
T ss_pred             cccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecC
Confidence            1112358899999999999999999999999999999999999999999999999988554332       223567999


Q ss_pred             cccCCCccc
Q psy2674         170 SNIAEGRRL  178 (183)
Q Consensus       170 pe~~~~~~~  178 (183)
                      ||.+.+..+
T Consensus       201 PE~~~~~~~  209 (296)
T cd05051         201 WESVLLGKF  209 (296)
T ss_pred             HHHhhcCCC
Confidence            999776433

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.95  E-value=1.5e-26  Score=169.89  Aligned_cols=166  Identities=22%  Similarity=0.264  Sum_probs=139.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-..+.||++....++..+++|.+...  .+......+.+|+.+++.++|+||+++++.+..++..++++|++++++|.
T Consensus        11 g~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~   90 (267)
T cd08229          11 GRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLS   90 (267)
T ss_pred             cccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHH
Confidence            4455678999999899999999987643  23344567889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....           ....+++..++.++.|++.++.|||+++++|+||+|+||+++.++.++++|||++......
T Consensus        91 ~~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd08229          91 RMIKHFKK-----------QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             HHHHHhhc-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence            98875321           1125788999999999999999999999999999999999999999999999998754332


Q ss_pred             -----cccceeeeeecccCCCccc
Q psy2674         160 -----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~~~  178 (183)
                           ...++..|+|||.+.+..+
T Consensus       160 ~~~~~~~~~~~~~~ape~~~~~~~  183 (267)
T cd08229         160 TTAAHSLVGTPYYMSPERIHENGY  183 (267)
T ss_pred             CcccccccCCcCccCHHHhcCCCc
Confidence                 2456788999999877654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.95  E-value=5.2e-26  Score=169.17  Aligned_cols=177  Identities=28%  Similarity=0.469  Sum_probs=137.3

Q ss_pred             CCCCCceeeeccCC-----CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDP-----QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |...++.||++...     .....+|+|.+...........+.+|+++++.+ +|+||+++++++.+++..++++||+++
T Consensus        21 g~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~  100 (293)
T cd05053          21 GEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAH  100 (293)
T ss_pred             cccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCC
Confidence            33455667776544     445789999988655555556788999999999 899999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGS-GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      ++|.+++............. .......+++..++.++.|++.|+.|||+++++|+||+|+||+++.++.++++|||+++
T Consensus       101 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~  180 (293)
T cd05053         101 GNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLAR  180 (293)
T ss_pred             CcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCcccccc
Confidence            99999997653221111111 11223468899999999999999999999999999999999999999999999999998


Q ss_pred             CCCcccc-------cceeeeeecccCCCccc
Q psy2674         155 DTYQKEY-------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       155 ~~~~~~~-------~~~~~~~~pe~~~~~~~  178 (183)
                      .......       ..+..|+|||+..+..+
T Consensus       181 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  211 (293)
T cd05053         181 DIHHIDYYRKTTNGRLPVKWMAPEALFDRVY  211 (293)
T ss_pred             ccccccceeccCCCCCCccccCHHHhccCCc
Confidence            6543221       12346999999876544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=1.8e-26  Score=170.93  Aligned_cols=160  Identities=22%  Similarity=0.305  Sum_probs=137.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++.+..++..+++|.+.... .......+.+|+.+++.++|+|++++++++.++...++++||+ +++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~   87 (286)
T cd07832           9 GEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSE   87 (286)
T ss_pred             ccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHH
Confidence            44567789999999999999999987443 2334457889999999999999999999999999999999999 899999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+.....              .+++..++.++.|++.++.+||+.+++|+||+|+||+++.++.++++|||++...... 
T Consensus        88 ~~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~  153 (286)
T cd07832          88 VLRDEER--------------PLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE  153 (286)
T ss_pred             HHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence            9876532              5889999999999999999999999999999999999999999999999998865433 


Q ss_pred             -----cccceeeeeecccCCCc
Q psy2674         160 -----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~  176 (183)
                           ...++.+|+|||++.+.
T Consensus       154 ~~~~~~~~~~~~y~aPE~~~~~  175 (286)
T cd07832         154 PRLYSHQVATRWYRAPELLYGA  175 (286)
T ss_pred             CCccccccCcccccCceeeecc
Confidence                 24567899999997653

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.95  E-value=1e-26  Score=172.23  Aligned_cols=159  Identities=20%  Similarity=0.300  Sum_probs=133.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++.+..+++.+|+|.+.... .....+.+.+|+++++.++|+|++++++.+..+...++++||++++.|..
T Consensus        10 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~   89 (286)
T cd07847          10 GEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNE   89 (286)
T ss_pred             cccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHH
Confidence            33456788999999999999999986432 22233467899999999999999999999999999999999999877777


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ......               .+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++...... 
T Consensus        90 ~~~~~~---------------~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07847          90 LEKNPR---------------GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPG  154 (286)
T ss_pred             HHhCCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence            664432               4889999999999999999999999999999999999999999999999999865433 


Q ss_pred             ----cccceeeeeecccCCC
Q psy2674         160 ----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~  175 (183)
                          ...++.+|+|||.+.+
T Consensus       155 ~~~~~~~~~~~~~aPE~~~~  174 (286)
T cd07847         155 DDYTDYVATRWYRAPELLVG  174 (286)
T ss_pred             ccccCcccccccCCHHHHhC
Confidence                3456788999999765

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=1.6e-26  Score=168.78  Aligned_cols=158  Identities=23%  Similarity=0.316  Sum_probs=130.8

Q ss_pred             CCCCCceeeeccCCCCc----------ceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEe
Q psy2674           2 SLIPNARGLKASDPQDT----------SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLE   71 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   71 (183)
                      |.-.++.||++....++          ..+++|.+......  ...+.+|+++++.++|+|++++++++.. ...++++|
T Consensus         4 g~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e   80 (259)
T cd05037           4 GQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEE   80 (259)
T ss_pred             cccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEE
Confidence            45567788888877666          45788876643332  4578899999999999999999999988 77899999


Q ss_pred             eCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-------c
Q psy2674          72 YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-------S  144 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-------~  144 (183)
                      |+++++|.+++.....              .+++..+..++.|++.||.|||+++++|+||+|+||+++..+       .
T Consensus        81 ~~~~~~L~~~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~  146 (259)
T cd05037          81 YVKFGPLDVFLHREKN--------------NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPF  146 (259)
T ss_pred             cCCCCcHHHHHHhhcc--------------CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCcee
Confidence            9999999999976542              478889999999999999999999999999999999998777       7


Q ss_pred             eEEecccCCCCCCcc-cccceeeeeecccCCCc
Q psy2674         145 VKISLSGLSKDTYQK-EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       145 ~ki~dfg~a~~~~~~-~~~~~~~~~~pe~~~~~  176 (183)
                      ++++|||++...... ...++..|+|||++.+.
T Consensus       147 ~kl~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~  179 (259)
T cd05037         147 IKLSDPGIPITVLSREERVERIPWIAPECIRNG  179 (259)
T ss_pred             EEeCCCCcccccccccccccCCCccChhhhcCC
Confidence            999999999865443 33445679999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.95  E-value=5.7e-26  Score=168.82  Aligned_cols=176  Identities=26%  Similarity=0.442  Sum_probs=135.2

Q ss_pred             CCCCceeeeccCC-----CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           3 LIPNARGLKASDP-----QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         3 ~~~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      --.++.||++...     .....+++|.+...........+.+|++.++.++||||+++++.+..++..++++||+.+++
T Consensus        10 ~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~   89 (290)
T cd05045          10 EGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS   89 (290)
T ss_pred             CcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCC
Confidence            3445666666543     24467889988766555556688999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCC---------CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEe
Q psy2674          78 LKQFLLATRKDSKDKSG---------SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS  148 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~  148 (183)
                      |.+++............         ........+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++|+
T Consensus        90 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~  169 (290)
T cd05045          90 LRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKIS  169 (290)
T ss_pred             HHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEec
Confidence            99998764321111100         001122358889999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         149 LSGLSKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       149 dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      |||++.......       ...+..|+|||...+..+
T Consensus       170 dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~  206 (290)
T cd05045         170 DFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIY  206 (290)
T ss_pred             cccccccccCccchhcccCCCCCccccCHHHHccCCc
Confidence            999997543221       123457999998766544

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.95  E-value=2.9e-26  Score=173.93  Aligned_cols=177  Identities=23%  Similarity=0.383  Sum_probs=134.1

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC-CccEEEEeeCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG-DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~~~~lv~e~~~   74 (183)
                      |.-.++.||++..     ..+++.||+|++...........+.+|+++++.+ +|+||+++++++..+ ..+++++||++
T Consensus        16 G~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~   95 (337)
T cd05054          16 GRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCK   95 (337)
T ss_pred             ccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCC
Confidence            4456677777753     3456899999987554555556788999999999 899999999988754 56889999999


Q ss_pred             CCCHHHHHHhhccCCCC-CCCC---------------------------------------------CCCCCCCCCHHHH
Q psy2674          75 WGDLKQFLLATRKDSKD-KSGS---------------------------------------------GKPRVRSLSTSQA  108 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~-~~~~---------------------------------------------~~~~~~~~~~~~~  108 (183)
                      +++|.+.+......... ....                                             .......+++..+
T Consensus        96 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  175 (337)
T cd05054          96 FGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDL  175 (337)
T ss_pred             CCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHH
Confidence            99999998654221000 0000                                             0001125788899


Q ss_pred             HHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-------cccceeeeeecccCCCccc
Q psy2674         109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       109 ~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..++.|++.|+.|||+++++||||||.||+++.++.++|+|||++......       ...++..|+|||++.+..+
T Consensus       176 ~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  252 (337)
T cd05054         176 ISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVY  252 (337)
T ss_pred             HHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCC
Confidence            999999999999999999999999999999999999999999999865322       2233567999999887665

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.95  E-value=4.2e-26  Score=167.38  Aligned_cols=159  Identities=19%  Similarity=0.286  Sum_probs=128.0

Q ss_pred             CCCCCceeeeccCC------------CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEE
Q psy2674           2 SLIPNARGLKASDP------------QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL   69 (183)
Q Consensus         2 ~~~~~~~~~~~~~~------------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   69 (183)
                      |.-.++.||++...            .....+++|.+..... .....+.+|+.+++.++||||+++++++..+...+++
T Consensus         4 g~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv   82 (262)
T cd05077           4 GRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR-DISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMV   82 (262)
T ss_pred             ccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh-hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEE
Confidence            44556677777532            2344688898765432 2344678899999999999999999999998899999


Q ss_pred             EeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc-----
Q psy2674          70 LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-----  144 (183)
Q Consensus        70 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~-----  144 (183)
                      +||+++++|..++.....              .+++...+.++.|++.|+.|||+++++||||+|+||+++.++.     
T Consensus        83 ~e~~~~~~l~~~~~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~  148 (262)
T cd05077          83 EEFVEFGPLDLFMHRKSD--------------VLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECG  148 (262)
T ss_pred             EecccCCCHHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCC
Confidence            999999999888765422              4788999999999999999999999999999999999976554     


Q ss_pred             --eEEecccCCCCCCc-ccccceeeeeecccCCC
Q psy2674         145 --VKISLSGLSKDTYQ-KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       145 --~ki~dfg~a~~~~~-~~~~~~~~~~~pe~~~~  175 (183)
                        ++++|||++..... ....++..|+|||.+.+
T Consensus       149 ~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~  182 (262)
T cd05077         149 PFIKLSDPGIPITVLSRQECVERIPWIAPECVED  182 (262)
T ss_pred             ceeEeCCCCCCccccCcccccccccccChhhhcC
Confidence              89999999876544 34556778999998863

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.94  E-value=5.2e-26  Score=170.20  Aligned_cols=177  Identities=25%  Similarity=0.352  Sum_probs=136.2

Q ss_pred             CCCCCceeeeccCCCCcce--EEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSV--LMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~--vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..++..  +++|.+...........+.+|++++..+ +|+||+++++++.+++..++++||+++++|
T Consensus        16 g~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   95 (303)
T cd05088          16 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL   95 (303)
T ss_pred             cCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcH
Confidence            4456788999987777654  5777766444455556788999999999 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGS-GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      .+++............. .......+++..++.++.|++.|+++||++|++|+||+|+||+++.++.++|+|||++....
T Consensus        96 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~  175 (303)
T cd05088          96 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE  175 (303)
T ss_pred             HHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccc
Confidence            99997654321111000 01122357889999999999999999999999999999999999999999999999987432


Q ss_pred             cc--c--ccceeeeeecccCCCccc
Q psy2674         158 QK--E--YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~--~--~~~~~~~~~pe~~~~~~~  178 (183)
                      ..  .  ...+..|+|||...+.++
T Consensus       176 ~~~~~~~~~~~~~y~aPE~~~~~~~  200 (303)
T cd05088         176 VYVKKTMGRLPVRWMAIESLNYSVY  200 (303)
T ss_pred             hhhhcccCCCcccccCHHHHhccCC
Confidence            11  1  112456999998876544

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG0690|consensus

Probab=99.94  E-value=5.2e-28  Score=175.63  Aligned_cols=163  Identities=15%  Similarity=0.192  Sum_probs=145.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.+++|+.|+...+++.+|+|++++.-  ..+.......|-.+|+..+||.+..+.-.|+..+.+++||||..||.|.
T Consensus       177 GkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf  256 (516)
T KOG0690|consen  177 GKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELF  256 (516)
T ss_pred             cCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEe
Confidence            44568899999999999999999998542  2334456778999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC--
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY--  157 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~--  157 (183)
                      -++++..               .+++...+.+..+|++|+.|||+++||.||+|..|.|+|.+|.+||.|||+++..-  
T Consensus       257 ~HLsrer---------------~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~  321 (516)
T KOG0690|consen  257 FHLSRER---------------VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY  321 (516)
T ss_pred             eehhhhh---------------cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccc
Confidence            8888764               59999999999999999999999999999999999999999999999999998432  


Q ss_pred             ---cccccceeeeeecccCCCcccc
Q psy2674         158 ---QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ---~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                         ...+|||+-|.|||++..+.|+
T Consensus       322 g~t~kTFCGTPEYLAPEVleDnDYg  346 (516)
T KOG0690|consen  322 GDTTKTFCGTPEYLAPEVLEDNDYG  346 (516)
T ss_pred             cceeccccCChhhcCchhhcccccc
Confidence               3478999999999999988885

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.94  E-value=5.2e-27  Score=171.93  Aligned_cols=163  Identities=26%  Similarity=0.393  Sum_probs=132.1

Q ss_pred             CCCCCceeeeccCC----CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDP----QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.+|.|+++...    ..+..|+||.++........+.+.+|++.++.++||||+++++++...+..++++||+++++
T Consensus         8 g~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~   87 (259)
T PF07714_consen    8 GEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGS   87 (259)
T ss_dssp             EEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEB
T ss_pred             ccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccccccc
Confidence            33456677766555    67889999999776666667899999999999999999999999998888999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....             ..+++..++.++.|++.|+.|||+++++|++|+++||+++.++.+||+|||++....
T Consensus        88 L~~~L~~~~~-------------~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~  154 (259)
T PF07714_consen   88 LDDYLKSKNK-------------EPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPIS  154 (259)
T ss_dssp             HHHHHHHTCT-------------TTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETT
T ss_pred             cccccccccc-------------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999988621             258899999999999999999999999999999999999999999999999998663


Q ss_pred             cc-------cccceeeeeecccCCCcc
Q psy2674         158 QK-------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       158 ~~-------~~~~~~~~~~pe~~~~~~  177 (183)
                      ..       .......|.|||.+.+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~aPE~~~~~~  181 (259)
T PF07714_consen  155 EKSKYKNDSSQQLPLRYLAPEVLKDGE  181 (259)
T ss_dssp             TSSSEEESTTSESGGGGS-HHHHHHSE
T ss_pred             ccccccccccccccccccccccccccc
Confidence            22       122345677999986544

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=3.6e-26  Score=167.82  Aligned_cols=162  Identities=20%  Similarity=0.284  Sum_probs=136.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--------HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--------DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |....+.+|++.+..++..+++|.+.....        ....+.+.+|+++++.++|+||+++++++.+.+..++++||+
T Consensus         9 g~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   88 (267)
T cd06628           9 GSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYV   88 (267)
T ss_pred             ecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEec
Confidence            345677899999989999999998763321        123356889999999999999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      ++++|.+++....               .+++..+..++.|++.++++||+++++|+||+|+||+++.++.++|+|||++
T Consensus        89 ~~~~L~~~l~~~~---------------~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~  153 (267)
T cd06628          89 PGGSVAALLNNYG---------------AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGIS  153 (267)
T ss_pred             CCCCHHHHHHhcc---------------CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCC
Confidence            9999999997653               4788889999999999999999999999999999999999999999999998


Q ss_pred             CCCCcc-----------cccceeeeeecccCCCccc
Q psy2674         154 KDTYQK-----------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       154 ~~~~~~-----------~~~~~~~~~~pe~~~~~~~  178 (183)
                      .....+           ...++..|+|||.+.+..+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~  189 (267)
T cd06628         154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSY  189 (267)
T ss_pred             cccccccccCCccccccccCCCcCccChhHhccCCC
Confidence            755421           1245678999999876544

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.3e-26  Score=169.51  Aligned_cols=161  Identities=20%  Similarity=0.300  Sum_probs=139.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++.+..++..+++|.+...........+.+|+++++.++|+|++++.+.+.++...++++||+++++|.+.
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   89 (274)
T cd06609          10 GKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDL   89 (274)
T ss_pred             cCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHH
Confidence            45667889999999999999999987554444456788999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++++|||++......  
T Consensus        90 ~~~~----------------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  153 (274)
T cd06609          90 LKPG----------------KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS  153 (274)
T ss_pred             Hhhc----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc
Confidence            8653                4788999999999999999999999999999999999999999999999998755432  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||.+.+..+
T Consensus       154 ~~~~~~~~~~y~~PE~~~~~~~  175 (274)
T cd06609         154 KRNTFVGTPFWMAPEVIKQSGY  175 (274)
T ss_pred             ccccccCCccccChhhhccCCC
Confidence               3456778999999887654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.94  E-value=4.5e-26  Score=168.64  Aligned_cols=175  Identities=29%  Similarity=0.477  Sum_probs=136.3

Q ss_pred             CCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           3 LIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         3 ~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      --.++.||++.     ...++..+++|.+.... ......+.+|++.++.++|+||+++++++.+.+..++++||+++++
T Consensus        15 ~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   93 (280)
T cd05092          15 EGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGD   93 (280)
T ss_pred             CccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCC
Confidence            34456666653     45567889999876443 3445578999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++....................+++..++.++.|++.|+.|||+++++|+||+|+||++++++.++|+|||++....
T Consensus        94 L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~  173 (280)
T cd05092          94 LNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY  173 (280)
T ss_pred             HHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcC
Confidence            99999876432221111112222357889999999999999999999999999999999999999999999999987543


Q ss_pred             ccc-------ccceeeeeecccCCCccc
Q psy2674         158 QKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ...       ..++..|+|||...+..+
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (280)
T cd05092         174 STDYYRVGGRTMLPIRWMPPESILYRKF  201 (280)
T ss_pred             CCceeecCCCccccccccCHHHhccCCc
Confidence            321       223467999999887665

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.94  E-value=2.2e-26  Score=169.97  Aligned_cols=164  Identities=17%  Similarity=0.204  Sum_probs=138.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |-..++.||++.+..+++.+++|.+....  .......+.+|+++++.++|||++++.+.+...+..++++||+++++|.
T Consensus         2 g~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   81 (277)
T cd05577           2 GKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLK   81 (277)
T ss_pred             CCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHH
Confidence            45567899999999999999999986432  2223446678999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....             ..+++..++.++.|++.++.+||+.+++|+||+|+||+++.++.++++|||++......
T Consensus        82 ~~l~~~~~-------------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~  148 (277)
T cd05577          82 YHIYNVGE-------------PGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG  148 (277)
T ss_pred             HHHHHcCc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC
Confidence            99876542             24889999999999999999999999999999999999999999999999998754322


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++..|+|||++.+..+
T Consensus       149 ~~~~~~~~~~~y~~PE~~~~~~~  171 (277)
T cd05577         149 KKIKGRAGTPGYMAPEVLQGEVY  171 (277)
T ss_pred             CccccccCCCCcCCHHHhcCCCC
Confidence                2345678999999877553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.94  E-value=7.5e-26  Score=167.54  Aligned_cols=158  Identities=20%  Similarity=0.333  Sum_probs=135.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++.+..++..+++|.+.... ....+.+.+|+++++.++|+|++++.+.+..++..++++||+++++|...
T Consensus        14 g~g~~g~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~   92 (282)
T cd06643          14 GDGAFGKVYKAQNKETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV   92 (282)
T ss_pred             ccCCCeEEEEEEECCCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHH
Confidence            44557789999999999999999986443 34456788999999999999999999999999999999999999999887


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....              .+++..+..++.|++.++.+||+.+++|+||+|+||+++.++.++++|||++.....   
T Consensus        93 ~~~~~~--------------~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~  158 (282)
T cd06643          93 MLELER--------------PLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ  158 (282)
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence            764321              588999999999999999999999999999999999999999999999999875432   


Q ss_pred             --ccccceeeeeecccCC
Q psy2674         159 --KEYYKYRWVICSNIAE  174 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~  174 (183)
                        ....++..|+|||++.
T Consensus       159 ~~~~~~~~~~y~aPE~~~  176 (282)
T cd06643         159 RRDSFIGTPYWMAPEVVM  176 (282)
T ss_pred             ccccccccccccCHhhcc
Confidence              2345678899999974

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.94  E-value=6.7e-26  Score=167.88  Aligned_cols=162  Identities=28%  Similarity=0.405  Sum_probs=131.0

Q ss_pred             CCCCCceeeecc----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKAS----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~   75 (183)
                      |.-.++.||++.    +..++..|++|.+.... ......+.+|++.++.++|+|++++.+++..  ....++++||+++
T Consensus        13 g~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   91 (284)
T cd05081          13 GKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPY   91 (284)
T ss_pred             cCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCC
Confidence            444566777765    56789999999986443 3344578899999999999999999998754  3468899999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++.....              .+++..++.++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||++..
T Consensus        92 ~~L~~~l~~~~~--------------~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~  157 (284)
T cd05081          92 GSLRDYLQKHRE--------------RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKV  157 (284)
T ss_pred             CCHHHHHHhcCc--------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccc
Confidence            999999865432              478899999999999999999999999999999999999999999999999986


Q ss_pred             CCccc--------ccceeeeeecccCCCccc
Q psy2674         156 TYQKE--------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~~~--------~~~~~~~~~pe~~~~~~~  178 (183)
                      .....        ..+...|+|||++.+..+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  188 (284)
T cd05081         158 LPQDKEYYKVREPGESPIFWYAPESLTESKF  188 (284)
T ss_pred             ccCCCcceeecCCCCCceEeeCHHHhccCCc
Confidence            54321        112345899999877654

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=6.2e-26  Score=169.06  Aligned_cols=174  Identities=22%  Similarity=0.384  Sum_probs=134.4

Q ss_pred             CCCCCceeeeccCCC--------------CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccE
Q psy2674           2 SLIPNARGLKASDPQ--------------DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHY   67 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~--------------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   67 (183)
                      |.-.++.||.+....              ....||+|.+...........+.+|++.++.++|+|++++++++...+..+
T Consensus        14 g~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   93 (295)
T cd05097          14 GEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLC   93 (295)
T ss_pred             CCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccE
Confidence            444566777776543              234689999876555556668999999999999999999999999999999


Q ss_pred             EEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEE
Q psy2674          68 LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI  147 (183)
Q Consensus        68 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki  147 (183)
                      ++|||+++++|.+++.........   ........+++..++.++.|++.|+.|||+++++|+||+|+||+++.++.+++
T Consensus        94 lv~e~~~~~~L~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl  170 (295)
T cd05097          94 MITEYMENGDLNQFLSQREIESTF---THANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKI  170 (295)
T ss_pred             EEEecCCCCcHHHHHHhccccccc---cccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEe
Confidence            999999999999998654210000   00011123678889999999999999999999999999999999999999999


Q ss_pred             ecccCCCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         148 SLSGLSKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       148 ~dfg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      +|||++.......       ..++..|+|||++.+..+
T Consensus       171 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  208 (295)
T cd05097         171 ADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKF  208 (295)
T ss_pred             cccccccccccCcceeccCcCcCceeecChhhhccCCc
Confidence            9999987543322       122457999998876443

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG0193|consensus

Probab=99.94  E-value=3.3e-27  Score=182.39  Aligned_cols=156  Identities=19%  Similarity=0.279  Sum_probs=130.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeecc-CCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLV-HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--.+|+||++..-.   .||||+++ ....++..+.|.+|+..+++-+|.||+-+.|+|..+.. .||+.||+|.+|..
T Consensus       401 GsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~  476 (678)
T KOG0193|consen  401 GSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYT  476 (678)
T ss_pred             ccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhh
Confidence            445677787665543   58999998 44567788899999999999999999999999998776 99999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC---
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY---  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~---  157 (183)
                      ++.....              .+.....+.|+.|++.|+.|||.++|||||+|..||++.++++|+|+|||++..-.   
T Consensus       477 hlHv~et--------------kfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~  542 (678)
T KOG0193|consen  477 HLHVQET--------------KFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWS  542 (678)
T ss_pred             hccchhh--------------hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeec
Confidence            9977643              68899999999999999999999999999999999999999999999999986221   


Q ss_pred             -cc---cccceeeeeecccCCC
Q psy2674         158 -QK---EYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 -~~---~~~~~~~~~~pe~~~~  175 (183)
                       ..   .-.+...|+|||+++-
T Consensus       543 g~~q~~qp~gsilwmAPEvIRm  564 (678)
T KOG0193|consen  543 GEQQLEQPHGSLLWMAPEVIRM  564 (678)
T ss_pred             cccccCCCccchhhhcHHHHhh
Confidence             11   1223456899999864

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.94  E-value=1.2e-25  Score=165.45  Aligned_cols=177  Identities=25%  Similarity=0.345  Sum_probs=136.6

Q ss_pred             CCCCCceeeeccCCCCcc--eEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-..+.||++....++.  .+++|.+.........+.+.+|++.++.+ +||||+++++.+...+..+++|||+++++|
T Consensus         4 g~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L   83 (270)
T cd05047           4 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL   83 (270)
T ss_pred             CCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcH
Confidence            555677889888877765  46888877555555556788999999999 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSG-SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      .+++............ ........+++..++.++.|++.|+++||+.+++|+||+|+||+++.++.++++|||++....
T Consensus        84 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~  163 (270)
T cd05047          84 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE  163 (270)
T ss_pred             HHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccc
Confidence            9998765321111000 011122357889999999999999999999999999999999999999999999999986332


Q ss_pred             cc--c--ccceeeeeecccCCCccc
Q psy2674         158 QK--E--YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~--~--~~~~~~~~~pe~~~~~~~  178 (183)
                      ..  .  ...+..|+|||+..+..+
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~  188 (270)
T cd05047         164 VYVKKTMGRLPVRWMAIESLNYSVY  188 (270)
T ss_pred             hhhhccCCCCccccCChHHHccCCC
Confidence            11  1  112456999999876554

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.94  E-value=5e-26  Score=169.30  Aligned_cols=159  Identities=18%  Similarity=0.329  Sum_probs=136.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++.+..++..+++|.+... +....+.+.+|+.+++.++|+|++++.+.+..++..+++|||+++++|..+
T Consensus        21 g~g~~g~vy~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~   99 (292)
T cd06644          21 GDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAI   99 (292)
T ss_pred             cCCCCeEEEEEEECCCCceEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHH
Confidence            4556788999999999999999998744 344456788999999999999999999999999999999999999999887


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....              .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++.....   
T Consensus       100 ~~~~~~--------------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~  165 (292)
T cd06644         100 MLELDR--------------GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ  165 (292)
T ss_pred             HHhhcC--------------CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence            765432              588999999999999999999999999999999999999999999999999875322   


Q ss_pred             --ccccceeeeeecccCCC
Q psy2674         159 --KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~  175 (183)
                        ....++..|+|||++.+
T Consensus       166 ~~~~~~~~~~y~aPE~~~~  184 (292)
T cd06644         166 RRDSFIGTPYWMAPEVVMC  184 (292)
T ss_pred             ccceecCCccccCceeecc
Confidence              23345778999999853

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.94  E-value=3.2e-26  Score=170.86  Aligned_cols=160  Identities=18%  Similarity=0.261  Sum_probs=137.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++.+..+++.+++|.+...... ..+.+.+|+..++.++|+|++++++.+.+.+..++++||+++++|..+
T Consensus        28 g~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  106 (296)
T cd06655          28 GQGASGTVFTAIDVATGQEVAIKQINLQKQP-KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDV  106 (296)
T ss_pred             ecCCCeEEEEEEEcCCCcEEEEEEEecccCc-hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHH
Confidence            3455678999999999999999998744332 245788999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++..+..++.+++.++.+||+++++|+||+|+||+++.++.++|+|||++......  
T Consensus       107 ~~~~----------------~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~  170 (296)
T cd06655         107 VTET----------------CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS  170 (296)
T ss_pred             HHhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence            8643                4788999999999999999999999999999999999999999999999998754432  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||.+.+..+
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~  192 (296)
T cd06655         171 KRSTMVGTPYWMAPEVVTRKAY  192 (296)
T ss_pred             cCCCcCCCccccCcchhcCCCC
Confidence               2356778999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.8e-26  Score=168.85  Aligned_cols=158  Identities=21%  Similarity=0.318  Sum_probs=136.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.||++....++..+++|.+... .....+.+.+|+++++.++|+|++++++.+..+...+++|||+++++|.++
T Consensus        14 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (280)
T cd06611          14 GDGAFGKVYKAQHKETGLFAAAKIIQIE-SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSI   92 (280)
T ss_pred             cCCCCceEEEEEEcCCCcEEEEEEEeeC-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHH
Confidence            4556788999998889999999998644 333456788999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..++.++.|++.++.|||+++++|+||+|+||+++.++.++|+|||++......  
T Consensus        93 ~~~~~~--------------~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (280)
T cd06611          93 MLELER--------------GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ  158 (280)
T ss_pred             HHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence            876532              5889999999999999999999999999999999999999999999999988644322  


Q ss_pred             ---cccceeeeeecccCC
Q psy2674         160 ---EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~  174 (183)
                         ...++..|+|||++.
T Consensus       159 ~~~~~~~~~~y~~PE~~~  176 (280)
T cd06611         159 KRDTFIGTPYWMAPEVVA  176 (280)
T ss_pred             ccceeecchhhcCHHHHh
Confidence               245678899999975

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=5.9e-26  Score=167.97  Aligned_cols=162  Identities=22%  Similarity=0.269  Sum_probs=131.8

Q ss_pred             CCCCCceeeeccCCCCcc----eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTS----VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++....++.    .+++|.+...........+..|+..++.++||||+++++++.. ...++++|++++++
T Consensus        16 g~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~i~e~~~~gs   94 (279)
T cd05111          16 GSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQLVTQLSPLGS   94 (279)
T ss_pred             CccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEEEEEeCCCCc
Confidence            556678888887766665    5777877644444445577888889999999999999998754 56788999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++++|||+++...
T Consensus        95 L~~~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~  160 (279)
T cd05111          95 LLDHVRQHRD--------------SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLY  160 (279)
T ss_pred             HHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceecc
Confidence            9999976432              58899999999999999999999999999999999999999999999999997543


Q ss_pred             cc-------cccceeeeeecccCCCccc
Q psy2674         158 QK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..       ...++..|+|||...+..|
T Consensus       161 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~  188 (279)
T cd05111         161 PDDKKYFYSEHKTPIKWMALESILFGRY  188 (279)
T ss_pred             CCCcccccCCCCCcccccCHHHhccCCc
Confidence            22       1234567999999877665

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.94  E-value=3.1e-26  Score=168.16  Aligned_cols=162  Identities=19%  Similarity=0.350  Sum_probs=137.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-----HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-----DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--..+.+|.+.+..++..+|+|.+.....     ....+.+.+|+..++.++|+||+++++.+.+.+..++++||+.++
T Consensus         9 g~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~   88 (268)
T cd06630           9 GTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGG   88 (268)
T ss_pred             cCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCC
Confidence            455678899999999999999999874321     223467889999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-ceEEecccCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SVKISLSGLSKD  155 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-~~ki~dfg~a~~  155 (183)
                      +|.+++....               .+++..++.++.|++.|+.+||+++++|+||+|.||+++.++ .++|+|||.+..
T Consensus        89 ~L~~~l~~~~---------------~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~  153 (268)
T cd06630          89 SVSHLLSKYG---------------AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAAR  153 (268)
T ss_pred             cHHHHHHHhC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence            9999987653               478899999999999999999999999999999999998664 699999999875


Q ss_pred             CCcc---------cccceeeeeecccCCCccc
Q psy2674         156 TYQK---------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~~---------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....         ...++..|+|||++.+..+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~  185 (268)
T cd06630         154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQY  185 (268)
T ss_pred             cccccccCCccccccccccceeCHhHhccCCC
Confidence            4332         2345778999999877654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.94  E-value=9.3e-26  Score=165.98  Aligned_cols=163  Identities=23%  Similarity=0.387  Sum_probs=129.2

Q ss_pred             CCCCCceeeeccC--CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASD--PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.||++..  ......+++|.+.........+.+.+|+..++.++||||+++++.+.+....+++|||+++++|.
T Consensus         4 g~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~   83 (268)
T cd05086           4 GNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLK   83 (268)
T ss_pred             CCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHH
Confidence            3445667776643  33345667777765544455668899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++......           ....++.....++.|++.|+.|||+.+++|+||||+||+++.++.++++|||++..... 
T Consensus        84 ~~l~~~~~~-----------~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~  152 (268)
T cd05086          84 SYLSQEQWH-----------RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE  152 (268)
T ss_pred             HHHHhhhcc-----------cccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc
Confidence            998764320           11356677888999999999999999999999999999999999999999999864322 


Q ss_pred             ------ccccceeeeeecccCCC
Q psy2674         159 ------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ------~~~~~~~~~~~pe~~~~  175 (183)
                            ....++..|+|||++.+
T Consensus       153 ~~~~~~~~~~~~~~y~aPE~~~~  175 (268)
T cd05086         153 DYIETEDDKCVPLRWLAPELVGE  175 (268)
T ss_pred             hhhhcccCCcCcccccCchhccc
Confidence                  23455678999999753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=1.5e-26  Score=178.80  Aligned_cols=155  Identities=14%  Similarity=0.175  Sum_probs=130.6

Q ss_pred             CCCCCceeeeccC--CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASD--PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||.+..  ...+..|++|.+....      ...+|+++++.++|+||+++++.+......+++||++. ++|.
T Consensus       101 g~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~  173 (392)
T PHA03207        101 TPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------TPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLF  173 (392)
T ss_pred             cCCCCeEEEEEEEcCCccceeEEEEeccccc------cHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHH
Confidence            4556778888754  4567899999886432      34679999999999999999999999899999999987 7888


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++....               .+++..++.++.|++.||.|||+++++||||||+||+++..+.++|+|||++......
T Consensus       174 ~~l~~~~---------------~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~  238 (392)
T PHA03207        174 TYVDRSG---------------PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH  238 (392)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence            8885432               4889999999999999999999999999999999999999999999999998754322


Q ss_pred             -------cccceeeeeecccCCCccc
Q psy2674         160 -------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 -------~~~~~~~~~~pe~~~~~~~  178 (183)
                             ...++..|+|||++.+..|
T Consensus       239 ~~~~~~~~~~gt~~y~aPE~~~~~~~  264 (392)
T PHA03207        239 PDTPQCYGWSGTLETNSPELLALDPY  264 (392)
T ss_pred             cccccccccccccCccCHhHhcCCCC
Confidence                   3467899999999987665

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.9e-26  Score=172.34  Aligned_cols=164  Identities=18%  Similarity=0.177  Sum_probs=138.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH--HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD--EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-..+.+|++.+..+++.+|+|.+......  ...+.+.+|++.++.++|+||+++++.+.+....++++||+.+++|.
T Consensus        10 g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   89 (316)
T cd05574          10 GKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELF   89 (316)
T ss_pred             cCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHH
Confidence            4456788999999999999999998754322  35567889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....             ..+++.....++.|++.++.|||+.+++|+||+|+||+++.++.++|+|||++......
T Consensus        90 ~~~~~~~~-------------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  156 (316)
T cd05574          90 RLLQRQPG-------------KCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE  156 (316)
T ss_pred             HHHHhCCC-------------CccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence            98875421             25888999999999999999999999999999999999999999999999987643221


Q ss_pred             ----------------------------------cccceeeeeecccCCCccc
Q psy2674         160 ----------------------------------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----------------------------------~~~~~~~~~~pe~~~~~~~  178 (183)
                                                        ...++..|+|||++.+..+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  209 (316)
T cd05574         157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGH  209 (316)
T ss_pred             ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCC
Confidence                                              2345778999999877644

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.94  E-value=5.1e-26  Score=166.97  Aligned_cols=162  Identities=20%  Similarity=0.237  Sum_probs=135.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC----CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS----KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~   75 (183)
                      |...++.+|.+.+..++..|++|.+...    ......+.+.+|++.++.++|+||+++.+.+.++  ..+++++||+++
T Consensus        11 ~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~   90 (265)
T cd06652          11 GQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPG   90 (265)
T ss_pred             ecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCC
Confidence            3446688999999999999999987522    1234456888999999999999999999998764  457899999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++....               .+++...+.++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++..
T Consensus        91 ~~L~~~l~~~~---------------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~  155 (265)
T cd06652          91 GSIKDQLKSYG---------------ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKR  155 (265)
T ss_pred             CcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence            99999987653               378888999999999999999999999999999999999999999999999874


Q ss_pred             CCc--------ccccceeeeeecccCCCccc
Q psy2674         156 TYQ--------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~--------~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...        ....++..|+|||++.+..+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (265)
T cd06652         156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGY  186 (265)
T ss_pred             cccccccccccccCCCCccccChhhhcCCCC
Confidence            321        12446778999999877654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.94  E-value=4.5e-27  Score=174.07  Aligned_cols=160  Identities=19%  Similarity=0.297  Sum_probs=134.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |....+.+|++.+..+|..+++|.+.... .......+.+|+++++.++|+|++++++++.+.+..++++||++ ++|.+
T Consensus         9 ~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~   87 (284)
T cd07839           9 GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKK   87 (284)
T ss_pred             cccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CCHHH
Confidence            44566789999999999999999987432 22233467789999999999999999999999999999999998 68888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++...... 
T Consensus        88 ~~~~~~~--------------~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~  153 (284)
T cd07839          88 YFDSCNG--------------DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV  153 (284)
T ss_pred             HHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence            7765322              4889999999999999999999999999999999999999999999999998754322 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ...++.+|+|||++.+.
T Consensus       154 ~~~~~~~~~~~y~aPE~~~~~  174 (284)
T cd07839         154 RCYSAEVVTLWYRPPDVLFGA  174 (284)
T ss_pred             CCcCCCccccCCcChHHHhCC
Confidence                23457889999997663

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=1.6e-26  Score=171.78  Aligned_cols=159  Identities=23%  Similarity=0.298  Sum_probs=132.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||++.+..+++.||+|.+...........+.+|+++++.++|+||+++++++.+.+..++++||++ ++|.+.
T Consensus        14 g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~   92 (291)
T cd07844          14 GEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TDLKQY   92 (291)
T ss_pred             eecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CCHHHH
Confidence            3455678999999999999999998743322223356789999999999999999999999999999999998 599998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++++|||++......  
T Consensus        93 ~~~~~~--------------~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  158 (291)
T cd07844          93 MDDCGG--------------GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK  158 (291)
T ss_pred             HHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence            866532              5788999999999999999999999999999999999999999999999998743221  


Q ss_pred             ---cccceeeeeecccCCC
Q psy2674         160 ---EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~  175 (183)
                         ...++..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~aPE~~~~  177 (291)
T cd07844         159 TYSNEVVTLWYRPPDVLLG  177 (291)
T ss_pred             cccccccccccCCcHHhhc
Confidence               1234677999998765

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.94  E-value=1e-26  Score=173.57  Aligned_cols=160  Identities=19%  Similarity=0.217  Sum_probs=136.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.+|++.+..++..+++|.+...... ..+.+.+|+..++.++|||++++++.+..++..++++||+++++|.++
T Consensus        30 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~  108 (297)
T cd06659          30 GEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ-RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDI  108 (297)
T ss_pred             CCCCceeEEEEEEcCCCCEEEEEEEEecccc-hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHH
Confidence            4456678899999899999999998644332 245688999999999999999999999999999999999999999987


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +...                .+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++.....   
T Consensus       109 ~~~~----------------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~  172 (297)
T cd06659         109 VSQT----------------RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP  172 (297)
T ss_pred             Hhhc----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc
Confidence            7543                478899999999999999999999999999999999999999999999999874432   


Q ss_pred             --ccccceeeeeecccCCCccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~  178 (183)
                        ....++..|+|||++.+..+
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~  194 (297)
T cd06659         173 KRKSLVGTPYWMAPEVISRTPY  194 (297)
T ss_pred             cccceecCccccCHHHHccCCC
Confidence              23456789999999876554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.94  E-value=4.8e-26  Score=167.88  Aligned_cols=171  Identities=40%  Similarity=0.672  Sum_probs=136.8

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |...++.||++..     ..+.+.+++|.+.........+.+.+|+++++.++|+||+++++++.+.+..++++||++++
T Consensus        14 g~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   93 (275)
T cd05046          14 GRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLG   93 (275)
T ss_pred             cccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCC
Confidence            4455667777764     34567899999876655555678999999999999999999999999989999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++.......      .......+++..+..++.|++.++.|||+++++|+||+|+||+++..+.++++|||++...
T Consensus        94 ~L~~~i~~~~~~~------~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~  167 (275)
T cd05046          94 DLKQFLRATKSKD------EKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDV  167 (275)
T ss_pred             cHHHHHHhccccc------ccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccccccccc
Confidence            9999997653110      0011124789999999999999999999999999999999999999999999999998754


Q ss_pred             Ccc------cccceeeeeecccCCCccc
Q psy2674         157 YQK------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...      ...++..|+|||.+.+..+
T Consensus       168 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~  195 (275)
T cd05046         168 YNSEYYKLRNALIPLRWLAPEAVQEDDF  195 (275)
T ss_pred             CcccccccCCceeEEeecChhhhccCCC
Confidence            322      2344567999999876543

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.94  E-value=8.9e-26  Score=166.77  Aligned_cols=169  Identities=26%  Similarity=0.350  Sum_probs=135.7

Q ss_pred             CCCCCceeeeccCCC-----CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQ-----DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--..+.||++....     .+..|++|.............+.+|+..++.++|+||+++++++.+.+..++++||++++
T Consensus        15 g~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~   94 (277)
T cd05036          15 GHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGG   94 (277)
T ss_pred             CCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCC
Confidence            445567788777766     788999999875555555567899999999999999999999999888999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC---ceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---SVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~---~~ki~dfg~a  153 (183)
                      +|.+++.......        .....+++..++.++.|++.++.|||+++++|+||+|+||+++.++   .++++|||++
T Consensus        95 ~L~~~i~~~~~~~--------~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~  166 (277)
T cd05036          95 DLKSFLRENRPRP--------ERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA  166 (277)
T ss_pred             CHHHHHHHhCCCC--------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccc
Confidence            9999997764211        0112478899999999999999999999999999999999997643   6999999999


Q ss_pred             CCCCcccc-------cceeeeeecccCCCccc
Q psy2674         154 KDTYQKEY-------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       154 ~~~~~~~~-------~~~~~~~~pe~~~~~~~  178 (183)
                      ........       ..+..|+|||++.+..+
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  198 (277)
T cd05036         167 RDIYRASYYRKGGRAMLPIKWMPPEAFLDGIF  198 (277)
T ss_pred             cccCCccceecCCCCCccHhhCCHHHHhcCCc
Confidence            86543222       22356999999876544

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.94  E-value=9.3e-26  Score=165.75  Aligned_cols=163  Identities=22%  Similarity=0.319  Sum_probs=134.2

Q ss_pred             CCCCCceeeeccCCCCcc---eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTS---VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-..+.+|++....++.   .+++|.+.........+.+.+|+++++.++|+|++++.+++.+.+..+++|||+++++|
T Consensus        14 g~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   93 (268)
T cd05063          14 GAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGAL   93 (268)
T ss_pred             cCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCH
Confidence            445667788887765544   79999987554455566788999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..+..++.+++.|+.+||+.+++|+||+|+||+++.++.++++|||++.....
T Consensus        94 ~~~~~~~~~--------------~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  159 (268)
T cd05063          94 DKYLRDHDG--------------EFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED  159 (268)
T ss_pred             HHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence            999865432              478889999999999999999999999999999999999999999999999875433


Q ss_pred             cc---c-----cceeeeeecccCCCccc
Q psy2674         159 KE---Y-----YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~---~-----~~~~~~~~pe~~~~~~~  178 (183)
                      ..   .     ..+..|+|||++.+..+
T Consensus       160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~  187 (268)
T cd05063         160 DPEGTYTTSGGKIPIRWTAPEAIAYRKF  187 (268)
T ss_pred             ccccceeccCCCcCceecCHHHhhcCCc
Confidence            21   1     11346999999877554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.94  E-value=6.8e-26  Score=168.21  Aligned_cols=177  Identities=27%  Similarity=0.441  Sum_probs=137.9

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.+|++.+     ..++..+|+|.+...........+.+|+.+++.++|+|++++++++.+++..++++||++++
T Consensus        14 g~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   93 (288)
T cd05050          14 GQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYG   93 (288)
T ss_pred             cccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCC
Confidence            3445667777664     34788999999886655555667899999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCC-------CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEec
Q psy2674          77 DLKQFLLATRKDSKDKSGS-------GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL  149 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~d  149 (183)
                      +|.+++.............       .......+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++++|
T Consensus        94 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~d  173 (288)
T cd05050          94 DLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIAD  173 (288)
T ss_pred             CHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECc
Confidence            9999997653211110000       011123578889999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         150 SGLSKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       150 fg~a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ||++.......       ...+..|+|||...+..+
T Consensus       174 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  209 (288)
T cd05050         174 FGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRY  209 (288)
T ss_pred             cccceecccCccccccCCCccChhhcCHHHHhcCCC
Confidence            99987543321       223456999999877654

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.94  E-value=5.1e-26  Score=170.30  Aligned_cols=162  Identities=19%  Similarity=0.180  Sum_probs=135.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |....+.+|++.+..+++.|++|.+....  .......+.+|+++++.++|+||+++++.+..++..++++||+++++|.
T Consensus        10 ~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~   89 (305)
T cd05609          10 SNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCA   89 (305)
T ss_pred             ecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHH
Confidence            34456789999999999999999987442  2334557889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++...+               .+++..+..++.|++.|+.|||+++++|+||+|+||+++..+.++++|||+++.... 
T Consensus        90 ~~l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~  154 (305)
T cd05609          90 TLLKNIG---------------ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS  154 (305)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence            9997653               478889999999999999999999999999999999999999999999998863110 


Q ss_pred             -------------------ccccceeeeeecccCCCccc
Q psy2674         159 -------------------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -------------------~~~~~~~~~~~pe~~~~~~~  178 (183)
                                         ....++..|+|||.+.+..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  193 (305)
T cd05609         155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGY  193 (305)
T ss_pred             ccccccccccccchhhccccCCccCccccCchhccCCCC
Confidence                               11345678999999766443

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=6.8e-26  Score=167.51  Aligned_cols=162  Identities=22%  Similarity=0.244  Sum_probs=132.9

Q ss_pred             CCCCCceeeeccCCCCcc----eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTS----VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++....++.    +||+|.+...........+.+|+..++.++|+||+++++++.. ...++++|++++|+
T Consensus        16 g~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~   94 (279)
T cd05109          16 GSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGC   94 (279)
T ss_pred             CCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCC
Confidence            455678888887665655    5899998765566556688899999999999999999999875 45789999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+.....              .+++..++.++.|++.|+.|||+++++|+||+|+||++++++.++|+|||+++...
T Consensus        95 l~~~l~~~~~--------------~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109          95 LLDYVRENKD--------------RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             HHHHHhhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence            9998865422              48889999999999999999999999999999999999999999999999988553


Q ss_pred             ccc-------ccceeeeeecccCCCccc
Q psy2674         158 QKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ...       ..++..|+|||...+..+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~  188 (279)
T cd05109         161 IDETEYHADGGKVPIKWMALESILHRRF  188 (279)
T ss_pred             cccceeecCCCccchhhCCHHHhccCCC
Confidence            221       112456999999877655

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.94  E-value=5.6e-26  Score=167.84  Aligned_cols=161  Identities=19%  Similarity=0.293  Sum_probs=138.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..+|+|.+...........+.+|+..++.++|+||+++++.+..++..++++||+++++|.+.
T Consensus        13 g~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~   92 (277)
T cd06641          13 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL   92 (277)
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHH
Confidence            44567889999888899999999987544444556788999999999999999999999999999999999999999988


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++..+..++.+++.++.+||+.+++|+||+|+||+++.++.++++|||++......  
T Consensus        93 i~~~----------------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06641          93 LEPG----------------PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             HhcC----------------CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh
Confidence            8532                4788999999999999999999999999999999999999999999999998754332  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++.+|+|||.+.+...
T Consensus       157 ~~~~~~~~~~y~~PE~~~~~~~  178 (277)
T cd06641         157 KRNTFVGTPFWMAPEVIKQSAY  178 (277)
T ss_pred             hhccccCCccccChhhhccCCC
Confidence               2346778999999876543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.94  E-value=9.8e-26  Score=167.47  Aligned_cols=174  Identities=31%  Similarity=0.503  Sum_probs=135.4

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.     ...++..+|+|.+.... ......+.+|+++++.++|+||+++.+++...+..++++||++++
T Consensus        14 g~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   92 (288)
T cd05093          14 GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG   92 (288)
T ss_pred             CCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCC
Confidence            334456666654     34567789999886443 334567899999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++...+.......  .......+++..++.++.|++.++.+||++|++||||+|+||+++.++.++++|||++...
T Consensus        93 ~L~~~i~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~  170 (288)
T cd05093          93 DLNKFLRAHGPDAVLMA--EGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV  170 (288)
T ss_pred             CHHHHHHHcCCcccccc--ccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccc
Confidence            99999976543211110  1112224899999999999999999999999999999999999999999999999999855


Q ss_pred             Cccc-------ccceeeeeecccCCCccc
Q psy2674         157 YQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ....       ..++..|+|||++.+..+
T Consensus       171 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  199 (288)
T cd05093         171 YSTDYYRVGGHTMLPIRWMPPESIMYRKF  199 (288)
T ss_pred             cCCceeecCCCCCccccccCHHHhccCCC
Confidence            3321       222557999999887654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.94  E-value=1.3e-25  Score=167.05  Aligned_cols=174  Identities=30%  Similarity=0.493  Sum_probs=134.0

Q ss_pred             CCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           4 IPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         4 ~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      -..+.+|.+.     ...++..+++|.+.... ......+.+|++.++.++|+||+++.+++.+++..+++|||+++++|
T Consensus        16 g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   94 (291)
T cd05094          16 GAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDL   94 (291)
T ss_pred             cCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcH
Confidence            3455566554     34567788998876433 33345788999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      .+++......... ...........+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++++|||++....
T Consensus        95 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~  174 (291)
T cd05094          95 NKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVY  174 (291)
T ss_pred             HHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccC
Confidence            9999765431110 000111122347889999999999999999999999999999999999999999999999997544


Q ss_pred             cc-------cccceeeeeecccCCCccc
Q psy2674         158 QK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..       ...++..|+|||.+.+..+
T Consensus       175 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~  202 (291)
T cd05094         175 STDYYRVGGHTMLPIRWMPPESIMYRKF  202 (291)
T ss_pred             CCceeecCCCCCcceeecChHHhccCCC
Confidence            32       2334567999999876554

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.94  E-value=1.6e-25  Score=166.98  Aligned_cols=160  Identities=25%  Similarity=0.458  Sum_probs=128.3

Q ss_pred             CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCC
Q psy2674          15 PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSG   94 (183)
Q Consensus        15 ~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~   94 (183)
                      ..++..+|+|.+...........+.+|++.++.++|+||+++++++.+++..++++||+++++|.+++.........   
T Consensus        43 ~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~---  119 (296)
T cd05095          43 GNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAA---  119 (296)
T ss_pred             CCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCccccc---
Confidence            34566899999876555666678999999999999999999999999999999999999999999999765321111   


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-------ccceeee
Q psy2674          95 SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-------YYKYRWV  167 (183)
Q Consensus        95 ~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-------~~~~~~~  167 (183)
                       .......+++...+.++.|++.|+++||+.+++|+||||+||+++.++.++++|||++.......       ...+..|
T Consensus       120 -~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~  198 (296)
T cd05095         120 -EKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRW  198 (296)
T ss_pred             -ccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCcccc
Confidence             01222357888999999999999999999999999999999999999999999999987543321       2224568


Q ss_pred             eecccCCCccc
Q psy2674         168 ICSNIAEGRRL  178 (183)
Q Consensus       168 ~~pe~~~~~~~  178 (183)
                      ++||...+.++
T Consensus       199 ~~pe~~~~~~~  209 (296)
T cd05095         199 MSWESILLGKF  209 (296)
T ss_pred             CCHHHHhcCCc
Confidence            89997665443

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=6.3e-26  Score=165.93  Aligned_cols=160  Identities=21%  Similarity=0.291  Sum_probs=137.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++....++..+++|.+...... ..+.+.+|+++++.++|+|++++++.+.+.+..++++||+++++|.++
T Consensus        12 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~   90 (262)
T cd06613          12 GSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDI   90 (262)
T ss_pred             cCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHH
Confidence            4456778999999889999999998744333 456788999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++......  
T Consensus        91 ~~~~~~--------------~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  156 (262)
T cd06613          91 YQVTRG--------------PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA  156 (262)
T ss_pred             HHhhcc--------------CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence            866421              4889999999999999999999999999999999999999999999999998754432  


Q ss_pred             ---cccceeeeeecccCCCc
Q psy2674         160 ---EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~  176 (183)
                         ...++..|+|||+..+.
T Consensus       157 ~~~~~~~~~~y~~Pe~~~~~  176 (262)
T cd06613         157 KRKSFIGTPYWMAPEVAAVE  176 (262)
T ss_pred             ccccccCCccccCchhhccc
Confidence               34567789999998765

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.94  E-value=1.3e-26  Score=172.65  Aligned_cols=160  Identities=18%  Similarity=0.247  Sum_probs=135.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.+|++.+..++..+|+|.+.... ....+.+.+|+..++.++|+|++++++.+..++..++++||+++++|.++
T Consensus        31 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~  109 (292)
T cd06658          31 GEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDI  109 (292)
T ss_pred             cCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHH
Confidence            44566789999999999999999986433 33455788999999999999999999999999999999999999999987


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +...                .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++.....   
T Consensus       110 ~~~~----------------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~  173 (292)
T cd06658         110 VTHT----------------RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP  173 (292)
T ss_pred             HhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence            7432                478889999999999999999999999999999999999999999999999874322   


Q ss_pred             --ccccceeeeeecccCCCccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~  178 (183)
                        ....++..|+|||...+..+
T Consensus       174 ~~~~~~~~~~y~aPE~~~~~~~  195 (292)
T cd06658         174 KRKSLVGTPYWMAPEVISRLPY  195 (292)
T ss_pred             cCceeecCccccCHHHHccCCC
Confidence              23456788999999866443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.94  E-value=6e-26  Score=165.68  Aligned_cols=164  Identities=15%  Similarity=0.243  Sum_probs=136.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec-CCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRD-GDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~   79 (183)
                      |....+.+|++.+..+++++++|.+... ......+.+.+|+++++.++|+|++++.+.+.. +...++++||+++++|.
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~   88 (257)
T cd08223           9 GKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLY   88 (257)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHH
Confidence            4456788999999999999999998743 234445578899999999999999999998864 44578999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +.+.....             ..+++..++.++.+++.++.+||+++++|+||+|+||+++..+.++|+|||++..... 
T Consensus        89 ~~l~~~~~-------------~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~  155 (257)
T cd08223          89 HKLKEQKG-------------KLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ  155 (257)
T ss_pred             HHHHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence            98875421             2478999999999999999999999999999999999999999999999999875432 


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....++..|+|||+..+..+
T Consensus       156 ~~~~~~~~~~~~y~aPE~~~~~~~  179 (257)
T cd08223         156 CDMASTLIGTPYYMSPELFSNKPY  179 (257)
T ss_pred             CCccccccCCcCccChhHhcCCCC
Confidence                23456788999999887654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=2.5e-26  Score=170.77  Aligned_cols=158  Identities=20%  Similarity=0.267  Sum_probs=131.0

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHH
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL   82 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   82 (183)
                      .-..+.||++.+..++..+++|.+...........+.+|++.++.++|+||+++.+++.+++..++++||+. ++|.+.+
T Consensus        15 ~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~   93 (291)
T cd07870          15 EGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYM   93 (291)
T ss_pred             ecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHH
Confidence            345678999999999999999998744333333356789999999999999999999999999999999997 7887776


Q ss_pred             HhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc----
Q psy2674          83 LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ----  158 (183)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~----  158 (183)
                      .....              .+.+..+..++.|++.|+.+||+.+++|+||+|+||+++.++.++|+|||+++....    
T Consensus        94 ~~~~~--------------~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  159 (291)
T cd07870          94 IQHPG--------------GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT  159 (291)
T ss_pred             HhCCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC
Confidence            54321              467778888999999999999999999999999999999999999999999875322    


Q ss_pred             -ccccceeeeeecccCCC
Q psy2674         159 -KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~  175 (183)
                       ....++.+|+|||+..+
T Consensus       160 ~~~~~~~~~y~aPE~~~~  177 (291)
T cd07870         160 YSSEVVTLWYRPPDVLLG  177 (291)
T ss_pred             CCCccccccccCCceeec
Confidence             22345788999999865

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.94  E-value=7e-26  Score=165.50  Aligned_cols=161  Identities=23%  Similarity=0.316  Sum_probs=131.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||++... ++..+|+|.+......  .+.+.+|+++++.++|+||+++++++...+..++++||+++++|.++
T Consensus        13 g~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   89 (256)
T cd05059          13 GSGQFGVVHLGKWR-GKIDVAIKMIREGAMS--EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNY   89 (256)
T ss_pred             ccCCCceEEEeEec-CCccEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHH
Confidence            44556778888664 4678999998643222  23678899999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY  161 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~  161 (183)
                      +.....              .+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++++|||+++.......
T Consensus        90 l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~  155 (256)
T cd05059          90 LRERKG--------------KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY  155 (256)
T ss_pred             HHhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence            875432              478899999999999999999999999999999999999999999999999875543321


Q ss_pred             c------ceeeeeecccCCCcccc
Q psy2674         162 Y------KYRWVICSNIAEGRRLN  179 (183)
Q Consensus       162 ~------~~~~~~~pe~~~~~~~~  179 (183)
                      .      .+..|+|||...+..++
T Consensus       156 ~~~~~~~~~~~y~~Pe~~~~~~~~  179 (256)
T cd05059         156 TSSQGTKFPVKWAPPEVFDYSRFS  179 (256)
T ss_pred             cccCCCCCCccccCHHHhccCCCC
Confidence            1      12369999998776543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.94  E-value=6.3e-26  Score=170.46  Aligned_cols=165  Identities=19%  Similarity=0.261  Sum_probs=128.3

Q ss_pred             CCCCCceeeeccC--CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASD--PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++..  ..++..+|+|.+......   ..+.+|+++++.++||||+++.+++..  +...++++||++ ++
T Consensus        10 G~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~---~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~   85 (317)
T cd07867          10 GRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS---MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HD   85 (317)
T ss_pred             ccCCCeeEEEEEecCCCccceEEEEEecCCCCc---HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-Cc
Confidence            4556788898874  347789999998744322   256789999999999999999999854  456889999987 68


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe----ccCCceEEecccCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI----SSDLSVKISLSGLS  153 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~----~~~~~~ki~dfg~a  153 (183)
                      |.+.+........      ......+++..++.++.|++.||.|||+++++||||||+||++    +..+.++|+|||++
T Consensus        86 l~~~~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a  159 (317)
T cd07867          86 LWHIIKFHRASKA------NKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA  159 (317)
T ss_pred             HHHHHHhhhcccc------CCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence            8887754321110      0111247889999999999999999999999999999999999    45679999999999


Q ss_pred             CCCCc--------ccccceeeeeecccCCCc
Q psy2674         154 KDTYQ--------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       154 ~~~~~--------~~~~~~~~~~~pe~~~~~  176 (183)
                      +....        ....++..|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  190 (317)
T cd07867         160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGA  190 (317)
T ss_pred             eccCCCcccccccCcceecccccCcHHhcCC
Confidence            75432        234568899999998763

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>KOG0610|consensus

Probab=99.94  E-value=2.5e-26  Score=170.73  Aligned_cols=141  Identities=19%  Similarity=0.203  Sum_probs=125.8

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|.-.-++||.+....++..+|+|++.+..  ......+.+.|-++|++++||.+..++..|+.+...+++||||+||+|
T Consensus        85 LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL  164 (459)
T KOG0610|consen   85 LGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDL  164 (459)
T ss_pred             cCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccH
Confidence            355667889999999999999999998543  233445778899999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      ....++...             ..+++..++.++.+++.||+|||.+|||.|||||+|||+.++|.+.++||.++.
T Consensus       165 ~~LrqkQp~-------------~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~  227 (459)
T KOG0610|consen  165 HSLRQKQPG-------------KRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSL  227 (459)
T ss_pred             HHHHhhCCC-------------CccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccc
Confidence            999987643             469999999999999999999999999999999999999999999999998764

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.94  E-value=1.8e-25  Score=168.06  Aligned_cols=177  Identities=28%  Similarity=0.433  Sum_probs=135.8

Q ss_pred             CCCCCceeeeccC-------CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKASD-------PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |-...+.||++.+       ......+|+|.+...........+.+|+++++.+ +|+||+++++++.+.+..++++||+
T Consensus        21 g~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~  100 (314)
T cd05099          21 GEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYA  100 (314)
T ss_pred             cCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecC
Confidence            3345566776643       3456689999987555555566788999999999 6999999999999989999999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGS-GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++++|.+++............. .......+++..+..++.|++.|+.|||++|++|+||+|+||+++.++.++++|||+
T Consensus       101 ~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~  180 (314)
T cd05099         101 AKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGL  180 (314)
T ss_pred             CCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccc
Confidence            9999999997754321111111 011123578889999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcccc-------cceeeeeecccCCCccc
Q psy2674         153 SKDTYQKEY-------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       153 a~~~~~~~~-------~~~~~~~~pe~~~~~~~  178 (183)
                      ++.......       .++..|+|||++.+..+
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  213 (314)
T cd05099         181 ARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVY  213 (314)
T ss_pred             cccccccccccccccCCCCccccCHHHHccCCc
Confidence            985543221       12346999999877654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.94  E-value=5e-26  Score=165.91  Aligned_cols=160  Identities=21%  Similarity=0.301  Sum_probs=138.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++....++..+++|.+.....   .+.+.+|++.++.++|+|++++.+.+.++...++++|++++++|.++
T Consensus        12 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~   88 (256)
T cd06612          12 GEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDI   88 (256)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHH
Confidence            445678899999888899999999864422   55789999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..++.++.|++.++.+||+.+++|+|++|+||+++.++.++++|||++......  
T Consensus        89 l~~~~~--------------~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~  154 (256)
T cd06612          89 MKITNK--------------TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA  154 (256)
T ss_pred             HHhCcc--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence            865432              5889999999999999999999999999999999999999999999999998865432  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||++.+..+
T Consensus       155 ~~~~~~~~~~y~~PE~~~~~~~  176 (256)
T cd06612         155 KRNTVIGTPFWMAPEVIQEIGY  176 (256)
T ss_pred             ccccccCCccccCHHHHhcCCC
Confidence               2345678999999877644

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.94  E-value=1.6e-25  Score=163.76  Aligned_cols=160  Identities=24%  Similarity=0.333  Sum_probs=130.7

Q ss_pred             CCCCCceeeecc--CCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKAS--DPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~--~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.++.||++.  ...++..+|+|++.... +....+.+.+|+.+++.++|+||+++++++.. +..++++||+++++|
T Consensus         4 g~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L   82 (257)
T cd05116           4 GSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELGPL   82 (257)
T ss_pred             CCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCCcH
Confidence            445667788774  45678899999987443 34456678999999999999999999998854 567899999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..+..++.|++.+++++|+++++|+||+|.||+++.++.++++|||++.....
T Consensus        83 ~~~l~~~~---------------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~  147 (257)
T cd05116          83 NKFLQKNK---------------HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGA  147 (257)
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCC
Confidence            99986543               488999999999999999999999999999999999999999999999999875533


Q ss_pred             cc--------ccceeeeeecccCCCcc
Q psy2674         159 KE--------YYKYRWVICSNIAEGRR  177 (183)
Q Consensus       159 ~~--------~~~~~~~~~pe~~~~~~  177 (183)
                      ..        ..++..|+|||.+.+..
T Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~  174 (257)
T cd05116         148 DENYYKAKTHGKWPVKWYAPECMNYYK  174 (257)
T ss_pred             CCCeeeecCCCCCCccccCHhHhccCC
Confidence            21        11235789999876544

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=2.8e-26  Score=170.03  Aligned_cols=163  Identities=17%  Similarity=0.242  Sum_probs=137.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++.+..++..+|+|.+....+......+.+|+++++.++|+||+++++.+..++..++++||+++++|.++
T Consensus        10 g~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~   89 (286)
T cd06622          10 GKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKL   89 (286)
T ss_pred             cccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHH
Confidence            45567889999999999999999987554555556889999999999999999999999999999999999999999888


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      +.....            ...+++..+..++.+++.++.|||+ .+++|+||+|+||+++.++.++++|||++...... 
T Consensus        90 ~~~~~~------------~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  157 (286)
T cd06622          90 YAGGVA------------TEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL  157 (286)
T ss_pred             HHhccc------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence            865311            1248899999999999999999996 59999999999999999999999999998754322 


Q ss_pred             --cccceeeeeecccCCCc
Q psy2674         160 --EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~  176 (183)
                        ...++..|+|||.+.+.
T Consensus       158 ~~~~~~~~~y~aPE~~~~~  176 (286)
T cd06622         158 AKTNIGCQSYMAPERIKSG  176 (286)
T ss_pred             cccCCCccCccCcchhcCC
Confidence              23456789999998653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.2e-25  Score=165.88  Aligned_cols=171  Identities=22%  Similarity=0.398  Sum_probs=135.1

Q ss_pred             CCCCCceeeeccCC-----CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDP-----QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++...     .++..+++|.+...........+.+|+++++.++|+||+++++++...+..++++||++++
T Consensus        15 g~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~   94 (277)
T cd05032          15 GQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKG   94 (277)
T ss_pred             cCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCC
Confidence            34455667766554     4558999999876655555667889999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++.........     ......+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||+++..
T Consensus        95 ~L~~~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~  169 (277)
T cd05032          95 DLKSYLRSRRPEAEN-----NPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDI  169 (277)
T ss_pred             CHHHHHHhcccchhh-----ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhh
Confidence            999999765321100     001124678889999999999999999999999999999999999999999999998754


Q ss_pred             Ccc-------cccceeeeeecccCCCcc
Q psy2674         157 YQK-------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       157 ~~~-------~~~~~~~~~~pe~~~~~~  177 (183)
                      ...       ...++..|+|||.+.+..
T Consensus       170 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~  197 (277)
T cd05032         170 YETDYYRKGGKGLLPVRWMAPESLKDGV  197 (277)
T ss_pred             ccCcccccCCCCCccccccCHHHHhcCC
Confidence            332       223356799999876544

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.94  E-value=8.7e-26  Score=164.66  Aligned_cols=164  Identities=33%  Similarity=0.562  Sum_probs=138.1

Q ss_pred             CCCCCceeeeccCCCCc----ceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDT----SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |...++.+|++....++    ..+|+|.+...........+.+|+..++.++|+|++++++.+.+++..++++|++++++
T Consensus         8 g~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~   87 (258)
T smart00219        8 GEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGD   87 (258)
T ss_pred             ccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCC
Confidence            44566778888887766    99999999866655456688999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+.....             ..+++..+..++.|++.++.+||+.+++|+||+|+||+++.++.++++|||++....
T Consensus        88 l~~~~~~~~~-------------~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~  154 (258)
T smart00219       88 LLDYLRKNRP-------------KELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY  154 (258)
T ss_pred             HHHHHHhhhh-------------ccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecc
Confidence            9999876532             128899999999999999999999999999999999999999999999999997555


Q ss_pred             ccccc------ceeeeeecccCCCccc
Q psy2674         158 QKEYY------KYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~~~~------~~~~~~~pe~~~~~~~  178 (183)
                      ....+      ++..|+|||...+..+
T Consensus       155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~  181 (258)
T smart00219      155 DDDYYKKKGGKLPIRWMAPESLKDGKF  181 (258)
T ss_pred             cccccccccCCCcccccChHHhccCCC
Confidence            43222      3467899998765444

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.94  E-value=5.4e-26  Score=165.83  Aligned_cols=161  Identities=23%  Similarity=0.370  Sum_probs=137.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC----CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK----DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |....+.+|++....++..+++|.+....    ..+..+.+.+|+++++.++|+|++++++++.++...++++||+++++
T Consensus         9 g~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   88 (258)
T cd06632           9 GSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGS   88 (258)
T ss_pred             eecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCc
Confidence            44567889999998899999999986332    23455678999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++....               .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++....
T Consensus        89 L~~~~~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~  153 (258)
T cd06632          89 LAKLLKKYG---------------SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVV  153 (258)
T ss_pred             HHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceecc
Confidence            999987653               37888999999999999999999999999999999999999999999999987543


Q ss_pred             c----ccccceeeeeecccCCCcc
Q psy2674         158 Q----KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       158 ~----~~~~~~~~~~~pe~~~~~~  177 (183)
                      .    ....++..|++||.+.+..
T Consensus       154 ~~~~~~~~~~~~~y~~pe~~~~~~  177 (258)
T cd06632         154 EFSFAKSFKGSPYWMAPEVIAQQG  177 (258)
T ss_pred             ccccccccCCCcceeCHHHhcCCC
Confidence            3    2345678899999876544

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.94  E-value=2.8e-26  Score=168.11  Aligned_cols=163  Identities=17%  Similarity=0.255  Sum_probs=141.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++.+..+++.+++|.+...........+.+|++.++.++|+||+++++.+..++..++++|++++++|.++
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   89 (265)
T cd06605          10 GAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKI   89 (265)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHH
Confidence            44567889999999999999999988665555667889999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      +.....              .+++.....++.|++.++.++|+ .+++|+||+|+||+++.++.++++|||.+...... 
T Consensus        90 ~~~~~~--------------~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~  155 (265)
T cd06605          90 LKEVQG--------------RIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL  155 (265)
T ss_pred             HHHccC--------------CCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence            876522              58889999999999999999999 99999999999999999999999999998754321 


Q ss_pred             --cccceeeeeecccCCCccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~  178 (183)
                        ...++..|+|||.+.+..+
T Consensus       156 ~~~~~~~~~y~~PE~~~~~~~  176 (265)
T cd06605         156 AKTFVGTSSYMAPERIQGNDY  176 (265)
T ss_pred             hhcccCChhccCHHHHcCCCC
Confidence              2456778999999877654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=5.5e-26  Score=168.44  Aligned_cols=161  Identities=16%  Similarity=0.237  Sum_probs=139.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--.++.+|++....+++.+|+|++...........+.+|+++++.++|+||+++++.+.+++..++++||+++++|.+.
T Consensus        14 g~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   93 (284)
T cd06620          14 GAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRI   93 (284)
T ss_pred             CCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHH
Confidence            45567889999999999999999987555555567889999999999999999999999999999999999999999988


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      +...+               .+++..+..++.+++.++.|||+ .+++|+||+|+||+++.++.++|+|||++.....  
T Consensus        94 ~~~~~---------------~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~  158 (284)
T cd06620          94 YKKGG---------------PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI  158 (284)
T ss_pred             HHhcc---------------CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence            86643               47889999999999999999997 5899999999999999999999999999864322  


Q ss_pred             -ccccceeeeeecccCCCcc
Q psy2674         159 -KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~  177 (183)
                       ....++..|+|||++.+..
T Consensus       159 ~~~~~~~~~~~aPE~~~~~~  178 (284)
T cd06620         159 ADTFVGTSTYMSPERIQGGK  178 (284)
T ss_pred             cCccccCcccCCHHHHccCC
Confidence             2346688899999986543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.94  E-value=1.1e-25  Score=164.32  Aligned_cols=160  Identities=24%  Similarity=0.327  Sum_probs=130.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.+|++... ++..+|+|.+......  .+.+.+|+++++.++||||+++++++..++..+++|||+++++|.+.
T Consensus        13 g~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~   89 (256)
T cd05114          13 GSGQFGVVHLGKWR-AQIKVAIKAINEGAMS--EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNY   89 (256)
T ss_pred             cCCcCceEEEEEec-cCceEEEEecccCCcc--HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHH
Confidence            44566778877653 4568999987643322  24688899999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY  161 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~  161 (183)
                      +.....              .+++..+..++.|++.++.|||+++++|+||+|+||+++.++.++++|||.+........
T Consensus        90 ~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05114          90 LRQRQG--------------KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY  155 (256)
T ss_pred             HHhCcc--------------CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCce
Confidence            865321              478889999999999999999999999999999999999999999999999875543221


Q ss_pred             ------cceeeeeecccCCCccc
Q psy2674         162 ------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       162 ------~~~~~~~~pe~~~~~~~  178 (183)
                            ..+..|+|||++.+..+
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~~  178 (256)
T cd05114         156 TSSSGAKFPVKWSPPEVFNFSKY  178 (256)
T ss_pred             eccCCCCCchhhCChhhcccCcc
Confidence                  22346999999876544

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.94  E-value=1.7e-25  Score=163.84  Aligned_cols=163  Identities=23%  Similarity=0.384  Sum_probs=130.7

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEe-cCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICR-DGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~   77 (183)
                      |-..++.||++..   ......+|+|.+.........+.+.+|+.+++.++|||++++++.+. .++..++++||+.+++
T Consensus         4 g~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~   83 (262)
T cd05058           4 GKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGD   83 (262)
T ss_pred             cccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCC
Confidence            4455677887763   34567899999875555556678889999999999999999999876 4556889999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              ...+...+.++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||++....
T Consensus        84 L~~~~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~  149 (262)
T cd05058          84 LRNFIRSETH--------------NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIY  149 (262)
T ss_pred             HHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCcccccccc
Confidence            9999875432              35667788899999999999999999999999999999999999999999987543


Q ss_pred             cc---------cccceeeeeecccCCCccc
Q psy2674         158 QK---------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~---------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..         ...++..|+|||.+.+..+
T Consensus       150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  179 (262)
T cd05058         150 DKEYYSVHNHTGAKLPVKWMALESLQTQKF  179 (262)
T ss_pred             CCcceeecccccCcCCccccChhHhccCcc
Confidence            32         1223557999998876544

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.94  E-value=5.4e-26  Score=171.85  Aligned_cols=160  Identities=14%  Similarity=0.135  Sum_probs=133.0

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHH
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL   82 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   82 (183)
                      -.++.||.+.+..+++.||+|++... ......+.+.+|+.+++.++|+||+++++++..++..++++||+.+++|.+.+
T Consensus        11 ~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l   90 (328)
T cd08226          11 CNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLL   90 (328)
T ss_pred             cCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHH
Confidence            35678999999999999999998743 34455578899999999999999999999999999999999999999999988


Q ss_pred             HhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc---
Q psy2674          83 LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK---  159 (183)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~---  159 (183)
                      .....             ..+++..+..++.|++.||.|||+++++||||||+||+++.++.++++||+.+......   
T Consensus        91 ~~~~~-------------~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~  157 (328)
T cd08226          91 KTYFP-------------EGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK  157 (328)
T ss_pred             Hhhcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence            76532             24788899999999999999999999999999999999999999999999754321110   


Q ss_pred             ---------cccceeeeeecccCCCc
Q psy2674         160 ---------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ---------~~~~~~~~~~pe~~~~~  176 (183)
                               ...++..|+|||++.+.
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~  183 (328)
T cd08226         158 AKVVYDFPQFSTSVLPWLSPELLRQD  183 (328)
T ss_pred             ccccccccccccCccCccChhhhcCC
Confidence                     01224569999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=3.4e-26  Score=189.33  Aligned_cols=163  Identities=17%  Similarity=0.224  Sum_probs=134.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..++..+|+|.+... ........+.+|+.+++.++||||++++++|.+.  ..++++|||+++++|
T Consensus        22 G~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL  101 (1021)
T PTZ00266         22 GNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDL  101 (1021)
T ss_pred             ecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcH
Confidence            4567889999999999999999998743 3444556889999999999999999999998653  468999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-------CceecccccceeEecc----------
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-------RLIHKDIAARNCLISS----------  141 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-------~ivH~di~~~nil~~~----------  141 (183)
                      .+++.....           ....+++..++.++.||+.||.|||+.       +|+|+||||.|||++.          
T Consensus       102 ~~lL~k~~~-----------~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~  170 (1021)
T PTZ00266        102 SRNIQKCYK-----------MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA  170 (1021)
T ss_pred             HHHHHHHhh-----------ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence            999876421           012589999999999999999999984       4999999999999953          


Q ss_pred             -------CCceEEecccCCCCCCcc----cccceeeeeecccCCC
Q psy2674         142 -------DLSVKISLSGLSKDTYQK----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       142 -------~~~~ki~dfg~a~~~~~~----~~~~~~~~~~pe~~~~  175 (183)
                             ...+||+|||++......    ...+++.|+|||++.+
T Consensus       171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~g  215 (1021)
T PTZ00266        171 QANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLH  215 (1021)
T ss_pred             cccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhc
Confidence                   345899999999865432    3467899999999854

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.94  E-value=1.1e-25  Score=167.10  Aligned_cols=167  Identities=17%  Similarity=0.248  Sum_probs=138.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L~   79 (183)
                      |--..+.+|.+.+..+++.+|+|.+..........++.+|++.++.++|+||+++++.+.+.  +..++++||+++++|.
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~   89 (287)
T cd06621          10 GEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLD   89 (287)
T ss_pred             ccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHH
Confidence            44567889999999999999999988555545566889999999999999999999998653  4689999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....           ....+++.....++.|++.++.|||+.+++|+||+|+||+++.++.++++|||++......
T Consensus        90 ~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  158 (287)
T cd06621          90 SIYKKVKK-----------RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS  158 (287)
T ss_pred             HHHHHHHh-----------cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence            88765321           1124788899999999999999999999999999999999999999999999998754332


Q ss_pred             ---cccceeeeeecccCCCcccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~~  179 (183)
                         ...++..|+|||.+.+..++
T Consensus       159 ~~~~~~~~~~y~~pE~~~~~~~~  181 (287)
T cd06621         159 LAGTFTGTSFYMAPERIQGKPYS  181 (287)
T ss_pred             ccccccCCccccCHHHhcCCCCC
Confidence               34557789999998776543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1e-25  Score=164.80  Aligned_cols=161  Identities=22%  Similarity=0.252  Sum_probs=133.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHh-cCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFC-KLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~-~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |....+.||++.+..+++.+|+|.+.....  ......+..|...+. ..+|+|++++++.+...+..++++||+++++|
T Consensus         5 ~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   84 (260)
T cd05611           5 SKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDC   84 (260)
T ss_pred             CcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCH
Confidence            556778899999999999999999864322  222234455555444 44899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..+..++.|++.|+.+||+.+++|+||+|+||+++.++.++++|||++.....
T Consensus        85 ~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~  149 (260)
T cd05611          85 ASLIKTLG---------------GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE  149 (260)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc
Confidence            99987653               478899999999999999999999999999999999999999999999999875443


Q ss_pred             -ccccceeeeeecccCCCcc
Q psy2674         159 -KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~  177 (183)
                       ....++..|++||.+.+..
T Consensus       150 ~~~~~~~~~y~~pe~~~~~~  169 (260)
T cd05611         150 NKKFVGTPDYLAPETILGVG  169 (260)
T ss_pred             cccCCCCcCccChhhhcCCC
Confidence             3455678899999988765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=1.2e-25  Score=166.04  Aligned_cols=144  Identities=23%  Similarity=0.324  Sum_probs=117.7

Q ss_pred             CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCC
Q psy2674          17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG   96 (183)
Q Consensus        17 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~   96 (183)
                      ....|++|.+..... .....+.+|+.+++.++|+||+++++++.+++..+++|||+++++|..++.....         
T Consensus        43 ~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---------  112 (274)
T cd05076          43 RELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG---------  112 (274)
T ss_pred             eeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC---------
Confidence            345688998864433 2334678899999999999999999999999999999999999999988865322         


Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-------ceEEecccCCCCCCc-ccccceeeee
Q psy2674          97 KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-------SVKISLSGLSKDTYQ-KEYYKYRWVI  168 (183)
Q Consensus        97 ~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-------~~ki~dfg~a~~~~~-~~~~~~~~~~  168 (183)
                           .+++..+..++.|++.||+|||+++++||||||+||+++..+       .++++|||++..... ....++..|+
T Consensus       113 -----~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~  187 (274)
T cd05076         113 -----RVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWI  187 (274)
T ss_pred             -----CCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCccc
Confidence                 478889999999999999999999999999999999997543       489999998864433 2344566789


Q ss_pred             ecccCCC
Q psy2674         169 CSNIAEG  175 (183)
Q Consensus       169 ~pe~~~~  175 (183)
                      |||.+.+
T Consensus       188 aPe~~~~  194 (274)
T cd05076         188 APECVPG  194 (274)
T ss_pred             CchhhcC
Confidence            9998765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.94  E-value=1e-25  Score=164.84  Aligned_cols=162  Identities=23%  Similarity=0.316  Sum_probs=135.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||.+.... +..+++|.+..... .....+.+|++.++.++|+||+++++++.+.+..++++||+++++|.++
T Consensus        15 g~g~~~~vy~~~~~~-~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   92 (261)
T cd05148          15 GSGYFGEVWEGLWKN-RVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAF   92 (261)
T ss_pred             ccCCCccEEEeEecC-CCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHH
Confidence            445677889888877 88999999874433 2344788999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++++|||++....... 
T Consensus        93 ~~~~~~-------------~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~  159 (261)
T cd05148          93 LRSPEG-------------QVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY  159 (261)
T ss_pred             HhcCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence            976422             247888999999999999999999999999999999999999999999999997654332 


Q ss_pred             ----ccceeeeeecccCCCccc
Q psy2674         161 ----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 ----~~~~~~~~~pe~~~~~~~  178 (183)
                          ...+..|+|||...+.++
T Consensus       160 ~~~~~~~~~~~~~PE~~~~~~~  181 (261)
T cd05148         160 LSSDKKIPYKWTAPEAASHGTF  181 (261)
T ss_pred             cccCCCCceEecCHHHHccCCC
Confidence                223457999999876554

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.94  E-value=1.2e-25  Score=164.40  Aligned_cols=160  Identities=26%  Similarity=0.335  Sum_probs=130.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|.+... .+..+|+|.+.....  ..+.+.+|+..++.++||||+++++++.+.+..++++||+.+++|.++
T Consensus        13 g~G~~~~vy~~~~~-~~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~   89 (256)
T cd05113          13 GTGQFGVVKYGKWR-GQYDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNY   89 (256)
T ss_pred             cCcccceEEEEEec-CCCcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHH
Confidence            44456777777543 345699998874322  234688999999999999999999999998899999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY  161 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~  161 (183)
                      +.....              .+++..++.++.|++.|+.+||+.+++|+||+|+||+++.++.++++|||.+.....+..
T Consensus        90 i~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~  155 (256)
T cd05113          90 LREHGK--------------RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY  155 (256)
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce
Confidence            876432              478899999999999999999999999999999999999999999999999875543322


Q ss_pred             ------cceeeeeecccCCCccc
Q psy2674         162 ------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       162 ------~~~~~~~~pe~~~~~~~  178 (183)
                            .++..|+|||...+..+
T Consensus       156 ~~~~~~~~~~~y~~pe~~~~~~~  178 (256)
T cd05113         156 TSSVGSKFPVRWSPPEVLLYSKF  178 (256)
T ss_pred             eecCCCccChhhCCHHHHhcCcc
Confidence                  12356999999876544

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.3e-25  Score=164.74  Aligned_cols=162  Identities=21%  Similarity=0.263  Sum_probs=135.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC----CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS----KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~   75 (183)
                      |-...+.+|++.+..++..+++|.+...    ........+.+|+++++.++|+||+++++.+.+.  +.+++++||+++
T Consensus        11 g~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~   90 (264)
T cd06653          11 GRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPG   90 (264)
T ss_pred             ccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCC
Confidence            3456678999999999999999987532    2234556888999999999999999999998764  457899999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++...+               .+++...+.++.|++.++.+||+++++|+||+|+||+++.++.++++|||++..
T Consensus        91 ~~L~~~~~~~~---------------~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~  155 (264)
T cd06653          91 GSIKDQLKAYG---------------ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (264)
T ss_pred             CcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence            99999987653               378888999999999999999999999999999999999999999999999975


Q ss_pred             CCc--------ccccceeeeeecccCCCccc
Q psy2674         156 TYQ--------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~--------~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...        ....++..|+|||.+.+..+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (264)
T cd06653         156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGY  186 (264)
T ss_pred             cccccccCccccccCCcccccCHhhhcCCCC
Confidence            422        12456788999999877543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.94  E-value=5e-26  Score=168.42  Aligned_cols=162  Identities=20%  Similarity=0.318  Sum_probs=135.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++.+..++..+|+|.+.........+.+.+|+++++.++|+|++++++.+.+.+..++++||++ ++|.++
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~~   87 (284)
T cd07836           9 GEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KDLKKY   87 (284)
T ss_pred             ccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC-ccHHHH
Confidence            4456778999999999999999998754433334467789999999999999999999999999999999998 588888


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....            ...+++..+..++.|++.++.+||+.+++|+||+|+||+++.++.++++|||++.....   
T Consensus        88 ~~~~~~------------~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~  155 (284)
T cd07836          88 MDTHGV------------RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN  155 (284)
T ss_pred             HHhcCC------------CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence            765431            12488999999999999999999999999999999999999999999999999874432   


Q ss_pred             --ccccceeeeeecccCCCc
Q psy2674         159 --KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~  176 (183)
                        ....++.+|+|||.+.+.
T Consensus       156 ~~~~~~~~~~y~~PE~~~~~  175 (284)
T cd07836         156 TFSNEVVTLWYRAPDVLLGS  175 (284)
T ss_pred             ccccccccccccChHHhcCC
Confidence              233457889999987654

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.94  E-value=1.1e-25  Score=165.54  Aligned_cols=159  Identities=19%  Similarity=0.243  Sum_probs=133.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--.++.||++.+..++..|++|.+..... ...+.+.+|+.+++.++|+||+++.+++..++..++++||+++++|.+.
T Consensus        17 g~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (268)
T cd06624          17 GKGTYGIVYAARDLSTQVRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSAL   95 (268)
T ss_pred             ecCCceEEEEeEecCCCcEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHH
Confidence            445678899999989999999998874433 3345789999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCCCCCc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSL--STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~~  158 (183)
                      +.....              .+  ++..+..++.|++.++.+||+++++|+||+|+||+++. .+.++|+|||++.....
T Consensus        96 l~~~~~--------------~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~  161 (268)
T cd06624          96 LRSKWG--------------PLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAG  161 (268)
T ss_pred             HHHhcc--------------cCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheeccc
Confidence            875421              23  77888889999999999999999999999999999975 67999999999875432


Q ss_pred             c-----cccceeeeeecccCCC
Q psy2674         159 K-----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~-----~~~~~~~~~~pe~~~~  175 (183)
                      .     ...++..|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~~~aPE~~~~  183 (268)
T cd06624         162 INPCTETFTGTLQYMAPEVIDK  183 (268)
T ss_pred             CCCccccCCCCccccChhhhcc
Confidence            1     2345778999999755

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.94  E-value=1.1e-25  Score=165.62  Aligned_cols=162  Identities=25%  Similarity=0.377  Sum_probs=132.3

Q ss_pred             CCCCCceeeeccCCC---CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQ---DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--..+.+|++....   +...+++|...........+.+.+|+..++.++|+||+++++++.+ +..++++||+++++|
T Consensus        15 g~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L   93 (270)
T cd05056          15 GEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGEL   93 (270)
T ss_pred             CCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcH
Confidence            334566788776543   3567899998766656666789999999999999999999999875 567899999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.+++.++.++|+.+++|+||+|+||+++..+.++++|||++.....
T Consensus        94 ~~~l~~~~~--------------~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  159 (270)
T cd05056          94 RSYLQVNKY--------------SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED  159 (270)
T ss_pred             HHHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence            999976432              478899999999999999999999999999999999999999999999999875443


Q ss_pred             ccc------cceeeeeecccCCCccc
Q psy2674         159 KEY------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~~------~~~~~~~~pe~~~~~~~  178 (183)
                      ...      ..+..|+|||.+.+..+
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~~~  185 (270)
T cd05056         160 ESYYKASKGKLPIKWMAPESINFRRF  185 (270)
T ss_pred             ccceecCCCCccccccChhhhccCCC
Confidence            321      12356999999876654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.94  E-value=4.2e-26  Score=169.08  Aligned_cols=160  Identities=19%  Similarity=0.318  Sum_probs=134.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |....+.+|++.+..+++.|++|.+... ........+.+|+++++.++|+||+++++.+.+++..++++||++++.+..
T Consensus        10 ~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~   89 (288)
T cd07833          10 GEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLEL   89 (288)
T ss_pred             cccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHH
Confidence            4456778999999999999999998743 233345678999999999999999999999999999999999999665655


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      +.....               .+++..+..++.+++.++.+||+++++|+|++|+||+++.++.++|+|||++...... 
T Consensus        90 ~~~~~~---------------~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          90 LEASPG---------------GLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             HHhcCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence            443321               4788999999999999999999999999999999999999999999999998754432 


Q ss_pred             -----cccceeeeeecccCCCc
Q psy2674         160 -----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~  176 (183)
                           ...++.+|+|||++.+.
T Consensus       155 ~~~~~~~~~~~~~~~PE~~~~~  176 (288)
T cd07833         155 ASPLTDYVATRWYRAPELLVGD  176 (288)
T ss_pred             cccccCcccccCCcCCchhcCC
Confidence                 34567889999998776

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=2.3e-25  Score=164.69  Aligned_cols=162  Identities=23%  Similarity=0.275  Sum_probs=132.4

Q ss_pred             CCCCCceeeeccCCCCcc----eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTS----VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.+|++....++.    .+|+|.+...........+.+|+..++.++|+|++++++++.. ...++++||+++++
T Consensus        16 g~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~   94 (279)
T cd05057          16 GSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGC   94 (279)
T ss_pred             cCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCc
Confidence            344567778776554443    6899988766666666788999999999999999999999987 78899999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.|+.|||+++++|+||+|+||+++.++.++++|||.++...
T Consensus        95 L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~  160 (279)
T cd05057          95 LLDYVRNHKD--------------NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLD  160 (279)
T ss_pred             HHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCccccccc
Confidence            9999876432              48899999999999999999999999999999999999999999999999998654


Q ss_pred             cccc-------cceeeeeecccCCCccc
Q psy2674         158 QKEY-------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~~~-------~~~~~~~~pe~~~~~~~  178 (183)
                      ....       ..+..|+|||...+..+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~  188 (279)
T cd05057         161 VDEKEYHAEGGKVPIKWMALESILHRIY  188 (279)
T ss_pred             CcccceecCCCcccccccCHHHhhcCCc
Confidence            3211       11346899998765543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.94  E-value=8.7e-26  Score=169.56  Aligned_cols=157  Identities=17%  Similarity=0.151  Sum_probs=133.0

Q ss_pred             CceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHh
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA   84 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   84 (183)
                      .+.++.+....+++.+|+|++... ......+.+.+|++.++.++|+||+++++.+.+++..++++||+++++|.+++..
T Consensus        13 ~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~   92 (314)
T cd08216          13 LMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKT   92 (314)
T ss_pred             CceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHH
Confidence            345677777789999999998754 3455667899999999999999999999999999999999999999999999976


Q ss_pred             hccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-----
Q psy2674          85 TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-----  159 (183)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-----  159 (183)
                      ...             ..+++.....++.|++.|+.|||+++++|+||+|+||+++.++.++++||+.+......     
T Consensus        93 ~~~-------------~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~  159 (314)
T cd08216          93 HFP-------------EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR  159 (314)
T ss_pred             hcc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence            532             24788899999999999999999999999999999999999999999999988643221     


Q ss_pred             -------cccceeeeeecccCCC
Q psy2674         160 -------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 -------~~~~~~~~~~pe~~~~  175 (183)
                             ...++..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~  182 (314)
T cd08216         160 VVHDFPKSSVKNLPWLSPEVLQQ  182 (314)
T ss_pred             ccccccccccccccccCHHHhcC
Confidence                   2334668999999865

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.94  E-value=1.1e-25  Score=183.98  Aligned_cols=157  Identities=21%  Similarity=0.267  Sum_probs=135.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++...  ........+.+|+.+++.++|+||+++++.+...+..+++|||+.+++|.
T Consensus        13 G~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~   92 (669)
T cd05610          13 SRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVK   92 (669)
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHH
Confidence            4557789999999999999999998643  23445567889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++....               .+++..++.++.|++.||.|||.++|+||||||+|||++.++.++|+|||+++.....
T Consensus        93 ~li~~~~---------------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~  157 (669)
T cd05610          93 SLLHIYG---------------YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNR  157 (669)
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCC
Confidence            9987653               4788899999999999999999999999999999999999999999999999865432


Q ss_pred             -----cccceeeeeecccC
Q psy2674         160 -----EYYKYRWVICSNIA  173 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~  173 (183)
                           ...+++.|++||..
T Consensus       158 ~~~~~~~~~t~~~~~pe~~  176 (669)
T cd05610         158 ELNMMDILTTPSMAKPKND  176 (669)
T ss_pred             cccccccccCccccCcccc
Confidence                 45667778888754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.94  E-value=1.3e-25  Score=166.15  Aligned_cols=158  Identities=18%  Similarity=0.166  Sum_probs=128.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHh---cCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFC---KLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~---~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--.++.||++.+..+++.+|+|.+....  .........+|..+++   ...|++++.+.+.+..++..+++|||++++
T Consensus         3 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~   82 (279)
T cd05633           3 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGG   82 (279)
T ss_pred             ccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCC
Confidence            55677899999999999999999886432  1222223344544433   347999999999999989999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++....               .+++..+..++.|++.|+++||+++++|+||+|+||+++.++.++++|||++...
T Consensus        83 ~L~~~i~~~~---------------~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~  147 (279)
T cd05633          83 DLHYHLSQHG---------------VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  147 (279)
T ss_pred             CHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence            9998886553               4899999999999999999999999999999999999999999999999998744


Q ss_pred             Cc---ccccceeeeeecccCC
Q psy2674         157 YQ---KEYYKYRWVICSNIAE  174 (183)
Q Consensus       157 ~~---~~~~~~~~~~~pe~~~  174 (183)
                      ..   ....++..|+|||...
T Consensus       148 ~~~~~~~~~~~~~y~aPE~~~  168 (279)
T cd05633         148 SKKKPHASVGTHGYMAPEVLQ  168 (279)
T ss_pred             cccCccCcCCCcCccCHHHhc
Confidence            32   2345788999999975

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.94  E-value=2.8e-25  Score=168.37  Aligned_cols=177  Identities=26%  Similarity=0.373  Sum_probs=134.5

Q ss_pred             CCCCCceeeeccCC-------CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKASDP-------QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |--.++.||.+.+.       ..+..+|+|.+.........+.+.+|+++++++ +|+||+++++.+.+++..++++||+
T Consensus        21 g~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~  100 (334)
T cd05100          21 GEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYA  100 (334)
T ss_pred             ccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecC
Confidence            33455666666432       234578999887555555567889999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGS-GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++++|.+++............. .......++...++.++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||+
T Consensus       101 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~  180 (334)
T cd05100         101 SKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGL  180 (334)
T ss_pred             CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCccc
Confidence            9999999997653211100000 001123477888999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         153 SKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       153 a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ++......       ..++..|+|||++.+..+
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  213 (334)
T cd05100         181 ARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVY  213 (334)
T ss_pred             ceecccccccccccCCCcCceEcCHHHhccCCc
Confidence            87543321       112356999999877544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.94  E-value=2e-25  Score=163.44  Aligned_cols=161  Identities=21%  Similarity=0.273  Sum_probs=132.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||++.. .++..+++|.+.....  ..+.+.+|+.+++.++|+||+++++.+.+++..++++||+++++|.++
T Consensus        15 g~g~~g~v~~~~~-~~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   91 (261)
T cd05072          15 GAGQFGEVWMGYY-NNSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDF   91 (261)
T ss_pred             CCcCCceEEEEEe-cCCceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHH
Confidence            4556778888875 4567799998764322  245788999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.++.|||+.+++|+||+|+||+++.++.++++|||++....... 
T Consensus        92 l~~~~~-------------~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05072          92 LKSDEG-------------GKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY  158 (261)
T ss_pred             HHHhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence            876422             247788889999999999999999999999999999999999999999999998554321 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||.+.+..+
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~  181 (261)
T cd05072         159 TAREGAKFPIKWTAPEAINFGSF  181 (261)
T ss_pred             eccCCCccceecCCHHHhccCCC
Confidence                 123457999999876543

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.94  E-value=4.3e-26  Score=166.78  Aligned_cols=161  Identities=23%  Similarity=0.266  Sum_probs=137.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |....+.+|++.+..+++.+++|.+.....  ....+.+.+|++.++.++|+|++++++.+......++++||+++++|.
T Consensus         2 g~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   81 (265)
T cd05579           2 SKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLA   81 (265)
T ss_pred             CCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHH
Confidence            455678899999999999999999874332  244567889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++....               .+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++++|||++......
T Consensus        82 ~~l~~~~---------------~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~  146 (265)
T cd05579          82 SLLENVG---------------SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR  146 (265)
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence            9997653               4889999999999999999999999999999999999999999999999998754332


Q ss_pred             -------------cccceeeeeecccCCCcc
Q psy2674         160 -------------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       160 -------------~~~~~~~~~~pe~~~~~~  177 (183)
                                   ...++..|++||...+..
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  177 (265)
T cd05579         147 RQINLNDDEKEDKRIVGTPDYIAPEVILGQG  177 (265)
T ss_pred             cccccccccccccCcccCccccCHHHhcCCC
Confidence                         234567899999876643

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.94  E-value=1.5e-25  Score=170.40  Aligned_cols=177  Identities=21%  Similarity=0.360  Sum_probs=133.5

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC-CccEEEEeeCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG-DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~~~~lv~e~~~   74 (183)
                      |.-.++.||+|.     ...+++.||+|.+...........+.+|+.++..+ +|+||+++++++..+ ...++++||++
T Consensus        16 G~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~   95 (343)
T cd05103          16 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK   95 (343)
T ss_pred             cCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccC
Confidence            455677788776     45678899999997554444556788999999999 789999999988654 46789999999


Q ss_pred             CCCHHHHHHhhccCCCCCCC----------------------------------------------------CCCCCCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSG----------------------------------------------------SGKPRVRS  102 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~----------------------------------------------------~~~~~~~~  102 (183)
                      +++|.+++............                                                    ........
T Consensus        96 ~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (343)
T cd05103          96 FGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKV  175 (343)
T ss_pred             CCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhcc
Confidence            99999998754211000000                                                    00001124


Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-------cccceeeeeecccCCC
Q psy2674         103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       103 ~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-------~~~~~~~~~~pe~~~~  175 (183)
                      ++...+..++.|++.|+.|||+++++||||||.||+++.++.++++|||++......       ...++..|+|||.+.+
T Consensus       176 ~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  255 (343)
T cd05103         176 LTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD  255 (343)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC
Confidence            677888999999999999999999999999999999999999999999998754322       1223456999999876


Q ss_pred             ccc
Q psy2674         176 RRL  178 (183)
Q Consensus       176 ~~~  178 (183)
                      ..+
T Consensus       256 ~~~  258 (343)
T cd05103         256 RVY  258 (343)
T ss_pred             CCC
Confidence            554

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>KOG0612|consensus

Probab=99.94  E-value=1.5e-27  Score=194.61  Aligned_cols=160  Identities=17%  Similarity=0.164  Sum_probs=141.8

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|-.++|.|..++...+++.+|+|++++-..  ......|..|-.++..-+++=|+.++-.|.++.++|+||||++||+|
T Consensus        83 IGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDl  162 (1317)
T KOG0612|consen   83 IGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDL  162 (1317)
T ss_pred             hcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchH
Confidence            3677899999999999999999999985211  12234677888889888999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ..+++...+               +++.+++.|..+|+.||.-+|+.|+|||||||+|||+|..|.+|++|||.+-....
T Consensus       163 ltLlSk~~~---------------~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~  227 (1317)
T KOG0612|consen  163 LTLLSKFDR---------------LPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDA  227 (1317)
T ss_pred             HHHHhhcCC---------------ChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCC
Confidence            999998853               99999999999999999999999999999999999999999999999999987765


Q ss_pred             c------cccceeeeeecccCCC
Q psy2674         159 K------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~------~~~~~~~~~~pe~~~~  175 (183)
                      +      .-+|||-|.+||++..
T Consensus       228 dG~V~s~~aVGTPDYISPEvLqs  250 (1317)
T KOG0612|consen  228 DGTVRSSVAVGTPDYISPEVLQS  250 (1317)
T ss_pred             CCcEEeccccCCCCccCHHHHHh
Confidence            4      3467999999999864

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.94  E-value=9.2e-26  Score=167.89  Aligned_cols=160  Identities=21%  Similarity=0.347  Sum_probs=134.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   78 (183)
                      |....+.||++.+..+++.+++|.+..... ......+.+|++.++.++||||+++.+++..+  +..++++||++ ++|
T Consensus        14 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~L   92 (293)
T cd07843          14 EEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVE-HDL   92 (293)
T ss_pred             cCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcC-cCH
Confidence            445667899999999999999999974332 22233567899999999999999999998877  88999999998 699


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.+.....              .+++..++.++.|++.|++|||+++++|+||+|+||+++.++.++++|||++.....
T Consensus        93 ~~~~~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~  158 (293)
T cd07843          93 KSLMETMKQ--------------PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS  158 (293)
T ss_pred             HHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence            988876432              488999999999999999999999999999999999999999999999999885543


Q ss_pred             c-----cccceeeeeecccCCCc
Q psy2674         159 K-----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ~-----~~~~~~~~~~pe~~~~~  176 (183)
                      .     ...++..|+|||.+.+.
T Consensus       159 ~~~~~~~~~~~~~~~aPE~~~~~  181 (293)
T cd07843         159 PLKPYTQLVVTLWYRAPELLLGA  181 (293)
T ss_pred             CccccccccccccccCchhhcCC
Confidence            2     24457789999998653

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.94  E-value=1.4e-25  Score=166.00  Aligned_cols=162  Identities=15%  Similarity=0.163  Sum_probs=132.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHH-HhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDL-FCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+|+.||+|.+...........+..|+.. ++..+|+|++++++++..++..++++||++ ++|.+
T Consensus        10 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~   88 (283)
T cd06617          10 GRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMD-TSLDK   88 (283)
T ss_pred             cccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhc-ccHHH
Confidence            4556788999999999999999998754333333356666665 556699999999999999999999999998 88988


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ++.....           ....+++..++.++.|++.|+.|||++ +++|+||+|+||+++.++.++|+|||++......
T Consensus        89 ~l~~~~~-----------~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~  157 (283)
T cd06617          89 FYKKVYD-----------KGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS  157 (283)
T ss_pred             HHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence            8865422           112588999999999999999999997 9999999999999999999999999998865432


Q ss_pred             ----cccceeeeeecccCCC
Q psy2674         160 ----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~  175 (183)
                          ...++..|+|||++.+
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~  177 (283)
T cd06617         158 VAKTIDAGCKPYMAPERINP  177 (283)
T ss_pred             cccccccCCccccChhhcCC
Confidence                2346778999998865

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.94  E-value=1.1e-25  Score=165.72  Aligned_cols=162  Identities=20%  Similarity=0.260  Sum_probs=135.8

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCC---------HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEe
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKD---------DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLE   71 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   71 (183)
                      +|.-..+.||++....+++.+|+|.+.....         ....+.+.+|+++++.++|+|++++++++..++..++++|
T Consensus         9 lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   88 (272)
T cd06629           9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLE   88 (272)
T ss_pred             ecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEe
Confidence            3556788999999989999999998752211         1123467889999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEeccc
Q psy2674          72 YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG  151 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg  151 (183)
                      |+++++|.+.+...+               .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++++|||
T Consensus        89 ~~~~~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~  153 (272)
T cd06629          89 YVPGGSIGSCLRTYG---------------RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFG  153 (272)
T ss_pred             cCCCCcHHHHHhhcc---------------CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecc
Confidence            999999999987653               47888899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcc-------cccceeeeeecccCCCcc
Q psy2674         152 LSKDTYQK-------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       152 ~a~~~~~~-------~~~~~~~~~~pe~~~~~~  177 (183)
                      ++......       ...++..|+|||+..+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~  186 (272)
T cd06629         154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYS  186 (272)
T ss_pred             ccccccccccccccccccCCccccCHHHhcccc
Confidence            98754321       234567899999976543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.94  E-value=1.9e-25  Score=163.10  Aligned_cols=163  Identities=23%  Similarity=0.264  Sum_probs=134.4

Q ss_pred             CCCCCceeeeccCCC---CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQ---DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |....+.||++....   ....+|+|.+.........+.+.+|+..++.++|+||+++++.+.+ ...++++||+++++|
T Consensus         4 g~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L   82 (257)
T cd05040           4 GDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSL   82 (257)
T ss_pred             CccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcH
Confidence            455667788876644   3347999998755443556688999999999999999999999988 889999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.+.....             ..+++..++.++.|++.|+++||+++++|+||+|+||+++.++.++|+|||++.....
T Consensus        83 ~~~l~~~~~-------------~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~  149 (257)
T cd05040          83 LDRLRKDAL-------------GHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQ  149 (257)
T ss_pred             HHHHHhccc-------------ccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccc
Confidence            999876531             1478899999999999999999999999999999999999999999999999886543


Q ss_pred             c--------cccceeeeeecccCCCccc
Q psy2674         159 K--------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~--------~~~~~~~~~~pe~~~~~~~  178 (183)
                      .        ...++..|+|||.+.+..+
T Consensus       150 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~  177 (257)
T cd05040         150 NEDHYVMEEHLKVPFAWCAPESLRTRTF  177 (257)
T ss_pred             cccceecccCCCCCceecCHHHhcccCc
Confidence            2        1233567999999876554

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.94  E-value=2.1e-25  Score=163.29  Aligned_cols=162  Identities=22%  Similarity=0.262  Sum_probs=141.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++.+..+++.+++|++...........+.+|+..+..++|+|++++++.+..++..++++||+++++|.++
T Consensus        10 ~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   89 (264)
T cd06623          10 GQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADL   89 (264)
T ss_pred             eecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHH
Confidence            44567789999999999999999988655545566889999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      +....               .+++...+.++.|++.++.++|+ .+++|+||+|+||+++.++.++++|||++...... 
T Consensus        90 l~~~~---------------~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          90 LKKVG---------------KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             HHHcC---------------CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence            97653               48899999999999999999999 99999999999999999999999999998865433 


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++..|.|||...+..+
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~  177 (264)
T cd06623         155 DQCNTFVGTVTYMSPERIQGESY  177 (264)
T ss_pred             CcccceeecccccCHhhhCCCCC
Confidence                2345678999999877643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.8e-25  Score=163.65  Aligned_cols=161  Identities=24%  Similarity=0.323  Sum_probs=131.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--..+.||++... ++..||+|.+.....  ..+.+.+|+.+++.++|+|++++++++...+..++++|++++++|.++
T Consensus        15 g~g~~~~v~~~~~~-~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   91 (261)
T cd05068          15 GAGQFGEVWEGLWN-NTTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEY   91 (261)
T ss_pred             cccCCccEEEEEec-CCeEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHH
Confidence            34456778887754 457899999874432  234688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY  161 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~  161 (183)
                      +.....             ..+++..+..++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++........
T Consensus        92 ~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05068          92 LQGGAG-------------RALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY  158 (261)
T ss_pred             HhccCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence            876431             2478899999999999999999999999999999999999999999999999875543221


Q ss_pred             ---cc---eeeeeecccCCCccc
Q psy2674         162 ---YK---YRWVICSNIAEGRRL  178 (183)
Q Consensus       162 ---~~---~~~~~~pe~~~~~~~  178 (183)
                         .+   +..|+|||...+..+
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~  181 (261)
T cd05068         159 EAREGAKFPIKWTAPEAALYNRF  181 (261)
T ss_pred             cccCCCcCceeccCccccccCCC
Confidence               11   346999999876544

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.94  E-value=2e-25  Score=163.21  Aligned_cols=166  Identities=17%  Similarity=0.268  Sum_probs=139.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L   78 (183)
                      |.-..+.+|++.+..++..+++|.+.. .......+++.+|+++++.++|+|++++++.+..  +...++++||+++++|
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L   88 (265)
T cd08217           9 GKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDL   88 (265)
T ss_pred             ccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCH
Confidence            445678899999999999999999874 3345556788899999999999999999998764  3457899999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-----cCCceecccccceeEeccCCceEEecccCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS-----DKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-----~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      .+++.....           ....+++..++.++.+++.++.+||     +.+++|+||+|+||+++.++.++++|||++
T Consensus        89 ~~~l~~~~~-----------~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~  157 (265)
T cd08217          89 AQLIQKCKK-----------ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA  157 (265)
T ss_pred             HHHHHHHhh-----------cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence            999876522           1125888999999999999999999     899999999999999999999999999998


Q ss_pred             CCCCcc-----cccceeeeeecccCCCccc
Q psy2674         154 KDTYQK-----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       154 ~~~~~~-----~~~~~~~~~~pe~~~~~~~  178 (183)
                      ......     ...++..|+|||++.+..+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~  187 (265)
T cd08217         158 KILGHDSSFAKTYVGTPYYMSPEQLNHMSY  187 (265)
T ss_pred             ccccCCcccccccccCCCccChhhhcCCCC
Confidence            865443     2456788999999877553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.94  E-value=3.4e-25  Score=165.29  Aligned_cols=177  Identities=24%  Similarity=0.366  Sum_probs=135.9

Q ss_pred             CCCCCceeeeccCCCCcc--eEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++....++.  .+++|.+.........+.+.+|+++++++ +||||+++++.+...+..++++||+++++|
T Consensus        11 g~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L   90 (297)
T cd05089          11 GEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNL   90 (297)
T ss_pred             cCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcH
Confidence            455678889887766654  46888877544555556788999999999 799999999999998999999999999999


Q ss_pred             HHHHHhhccCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSG-SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      .+++............ ........+++..++.++.|++.|+++||+++++|+||||+||+++.++.++|+|||++....
T Consensus        91 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  170 (297)
T cd05089          91 LDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEE  170 (297)
T ss_pred             HHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCcccc
Confidence            9999764321111000 001112358889999999999999999999999999999999999999999999999987432


Q ss_pred             cc--cc--cceeeeeecccCCCccc
Q psy2674         158 QK--EY--YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~--~~--~~~~~~~~pe~~~~~~~  178 (183)
                      ..  ..  ..+..|+|||...+.++
T Consensus       171 ~~~~~~~~~~~~~y~aPE~~~~~~~  195 (297)
T cd05089         171 VYVKKTMGRLPVRWMAIESLNYSVY  195 (297)
T ss_pred             ceeccCCCCcCccccCchhhccCCC
Confidence            21  11  11346999999876554

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.94  E-value=2.5e-25  Score=163.46  Aligned_cols=162  Identities=22%  Similarity=0.273  Sum_probs=134.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC----CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK----DDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~   75 (183)
                      |.-..+.+|++.+..++..+++|.+....    .......+.+|+.+++.++|+||+++.+.+.+.  ...++++||+++
T Consensus        11 g~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~   90 (266)
T cd06651          11 GQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPG   90 (266)
T ss_pred             cCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCC
Confidence            44567889999999999999999886321    223445788999999999999999999998753  567899999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+....               .+++...+.++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++..
T Consensus        91 ~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~  155 (266)
T cd06651          91 GSVKDQLKAYG---------------ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKR  155 (266)
T ss_pred             CcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence            99999987653               378888899999999999999999999999999999999999999999999874


Q ss_pred             CCc--------ccccceeeeeecccCCCccc
Q psy2674         156 TYQ--------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~--------~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...        ....++..|+|||.+.+..+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  186 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGY  186 (266)
T ss_pred             cccccccCCccccCCccccccCHHHhCCCCC
Confidence            322        12346778999999877543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.94  E-value=2.2e-25  Score=167.04  Aligned_cols=158  Identities=18%  Similarity=0.260  Sum_probs=134.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--..+.+|++....+++.|++|.+...  ........+.+|+++++.++|||++++.+++.+++..++++||+. +++.
T Consensus        24 g~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g~l~  102 (307)
T cd06607          24 GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-GSAS  102 (307)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-CCHH
Confidence            3445678999998889999999998632  334445678899999999999999999999999999999999998 7887


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+.....              .+++..+..++.|++.++.|||+++++|+||+|+||+++.++.++|+|||++......
T Consensus       103 ~~~~~~~~--------------~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~  168 (307)
T cd06607         103 DILEVHKK--------------PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA  168 (307)
T ss_pred             HHHHHccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence            77754322              4888999999999999999999999999999999999999999999999998765433


Q ss_pred             -cccceeeeeecccCC
Q psy2674         160 -EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 -~~~~~~~~~~pe~~~  174 (183)
                       ...++..|+|||++.
T Consensus       169 ~~~~~~~~y~aPE~~~  184 (307)
T cd06607         169 NSFVGTPYWMAPEVIL  184 (307)
T ss_pred             CCccCCccccCceeee
Confidence             455677899999874

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=3.2e-25  Score=162.05  Aligned_cols=161  Identities=26%  Similarity=0.381  Sum_probs=131.9

Q ss_pred             CCCCCceeeeccCCCCc---ceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDT---SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |-..++.|+++....++   ..+|+|.+.........+.+.+|++.++.+.|+|++++++++. .+..++++||+++++|
T Consensus         4 g~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L   82 (257)
T cd05060           4 GHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPL   82 (257)
T ss_pred             CccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcH
Confidence            44567778877654444   8999999986655445567899999999999999999999876 4568999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.++.+||+.+++|+||+|+||+++.++.++++|||++.....
T Consensus        83 ~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~  147 (257)
T cd05060          83 LKYLKKRR---------------EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGA  147 (257)
T ss_pred             HHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeec
Confidence            99997653               378999999999999999999999999999999999999999999999999885533


Q ss_pred             ccc-c-------ceeeeeecccCCCccc
Q psy2674         159 KEY-Y-------KYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~~-~-------~~~~~~~pe~~~~~~~  178 (183)
                      ... +       ++..|+|||...+..+
T Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~  175 (257)
T cd05060         148 GSDYYRATTAGRWPLKWYAPECINYGKF  175 (257)
T ss_pred             CCcccccccCccccccccCHHHhcCCCC
Confidence            321 1       1235899999876554

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=2.9e-25  Score=162.09  Aligned_cols=159  Identities=25%  Similarity=0.381  Sum_probs=132.4

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHH
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL   82 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   82 (183)
                      ....+.||++..  .++.+++|.+.....  ..+++.+|+.+++.++|+|++++++++.+.+..++++|++++++|.+++
T Consensus        16 ~g~~g~v~~~~~--~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~   91 (256)
T cd05039          16 KGEFGDVMLGDY--RGQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYL   91 (256)
T ss_pred             cCCCceEEEEEe--cCcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHH
Confidence            345567887765  478999999874433  4567899999999999999999999999989999999999999999998


Q ss_pred             HhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccccc
Q psy2674          83 LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY  162 (183)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~~  162 (183)
                      .....             ..+++.....++.|++.++.+||+++++|+||+|+||+++.++.++|+|||.+.........
T Consensus        92 ~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~  158 (256)
T cd05039          92 RSRGR-------------AVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDS  158 (256)
T ss_pred             HhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccccc
Confidence            76532             24889999999999999999999999999999999999999999999999999866433222


Q ss_pred             --ceeeeeecccCCCccc
Q psy2674         163 --KYRWVICSNIAEGRRL  178 (183)
Q Consensus       163 --~~~~~~~pe~~~~~~~  178 (183)
                        .+..|+|||.+.+..+
T Consensus       159 ~~~~~~~~ape~~~~~~~  176 (256)
T cd05039         159 GKLPVKWTAPEALREKKF  176 (256)
T ss_pred             CCCcccccCchhhcCCcC
Confidence              2446899998876543

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.94  E-value=3.6e-25  Score=165.89  Aligned_cols=177  Identities=24%  Similarity=0.366  Sum_probs=134.6

Q ss_pred             CCCCCceeeeccCC-------CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKASDP-------QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |--.++.||.+...       .+...+|+|.+...........+.+|+++++.+ +|+||+++++++...+..++++||+
T Consensus        27 g~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~  106 (307)
T cd05098          27 GEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA  106 (307)
T ss_pred             ccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecC
Confidence            34456677766542       234679999987554445556788999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          74 DWGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++++|.+++......... ...........++...++.++.|++.|++|||++|++|+||+|+||+++.++.++++|||+
T Consensus       107 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~  186 (307)
T cd05098         107 SKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL  186 (307)
T ss_pred             CCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcc
Confidence            999999999765321110 0000001112478889999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         153 SKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       153 a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      +.......       ...+..|+|||++.+..+
T Consensus       187 a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  219 (307)
T cd05098         187 ARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIY  219 (307)
T ss_pred             cccccccchhhccccCCCccceeChHHhccCCC
Confidence            87554321       112357999999876544

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.94  E-value=4.5e-26  Score=166.60  Aligned_cols=161  Identities=17%  Similarity=0.203  Sum_probs=138.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-..+.+|++.+..++..+++|.+....  .....+.+.+|++.++.++||||+++++.+.+++..++++||+.+++|.
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   88 (258)
T cd05578           9 GKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLR   88 (258)
T ss_pred             ccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHH
Confidence            44567789999999999999999987432  2344568899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ..+....               .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++++|||++......
T Consensus        89 ~~l~~~~---------------~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  153 (258)
T cd05578          89 YHLSQKV---------------KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPD  153 (258)
T ss_pred             HHHHhcC---------------CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence            9987653               4888999999999999999999999999999999999999999999999998865443


Q ss_pred             ----cccceeeeeecccCCCcc
Q psy2674         160 ----EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~  177 (183)
                          ...++..|.|||+..+..
T Consensus       154 ~~~~~~~~~~~y~~PE~~~~~~  175 (258)
T cd05578         154 TLTTSTSGTPGYMAPEVLCRQG  175 (258)
T ss_pred             ccccccCCChhhcCHHHHcccC
Confidence                344567899999987544

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2e-25  Score=164.78  Aligned_cols=158  Identities=18%  Similarity=0.297  Sum_probs=135.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC---CcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD---HAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |....+.+|++.+..++..+++|.+...........+.+|+.+++.++   |+|++++.+.+.+....++++||+++++|
T Consensus        10 ~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L   89 (277)
T cd06917          10 GRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSV   89 (277)
T ss_pred             eccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcH
Confidence            445678899999999999999999875544445567889999999986   99999999999988899999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++...                .+++..++.++.+++.++.+||+.+++|+||+|+||+++..+.++++|||++.....
T Consensus        90 ~~~~~~~----------------~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~  153 (277)
T cd06917          90 RTLMKAG----------------PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQ  153 (277)
T ss_pred             HHHHHcc----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence            9887543                478899999999999999999999999999999999999999999999999875543


Q ss_pred             c-----cccceeeeeecccCCC
Q psy2674         159 K-----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~-----~~~~~~~~~~pe~~~~  175 (183)
                      .     ...++..|+|||.+.+
T Consensus       154 ~~~~~~~~~~~~~y~aPE~~~~  175 (277)
T cd06917         154 NSSKRSTFVGTPYWMAPEVITE  175 (277)
T ss_pred             CccccccccCCcceeCHHHhcc
Confidence            2     2356778999998754

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.94  E-value=3.8e-26  Score=169.24  Aligned_cols=160  Identities=23%  Similarity=0.355  Sum_probs=134.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |-...+.||++....+++.+|+|.+..... ....+.+.+|+++++.++|+||+++.+++.+++..++++||+++++|..
T Consensus        10 g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~   89 (286)
T cd07846          10 GEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDD   89 (286)
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHH
Confidence            445677899999988999999999864332 2334567899999999999999999999999999999999999888877


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ......               .+++..++.++.|++.++.|||+.+++|+|++|+||+++.++.++++|||++...... 
T Consensus        90 ~~~~~~---------------~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07846          90 LEKYPN---------------GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  154 (286)
T ss_pred             HHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence            654332               4789999999999999999999999999999999999999999999999998754332 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ...++.+|+|||++.+.
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~  175 (286)
T cd07846         155 EVYTDYVATRWYRAPELLVGD  175 (286)
T ss_pred             cccCcccceeeccCcHHhccc
Confidence                34567899999998653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.94  E-value=2.4e-25  Score=162.46  Aligned_cols=164  Identities=18%  Similarity=0.343  Sum_probs=138.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |....+.++.+.+..+++.+++|.+... ........+.+|+..++.++|+||+++.+.+.+.+..++++||+.+++|.+
T Consensus         9 g~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~   88 (256)
T cd08218           9 GEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYK   88 (256)
T ss_pred             ccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHH
Confidence            4456678899999999999999998733 234445578999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+.....             ..+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++++|||++...... 
T Consensus        89 ~~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~  155 (256)
T cd08218          89 KINAQRG-------------VLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV  155 (256)
T ss_pred             HHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence            8865422             14788899999999999999999999999999999999999999999999998755443 


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++..|+|||++.+..+
T Consensus       156 ~~~~~~~~~~~~~~pe~~~~~~~  178 (256)
T cd08218         156 ELARTCIGTPYYLSPEICENRPY  178 (256)
T ss_pred             hhhhhccCCccccCHHHhCCCCC
Confidence                2345677999999877553

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.94  E-value=1.6e-25  Score=164.76  Aligned_cols=159  Identities=18%  Similarity=0.321  Sum_probs=132.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC------CccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG------DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~------~~~~lv~e~~~   74 (183)
                      |.-.++.+|++....+++.+|+|.+......  ...+.+|+.+++.+ +|+|++++.+.+...      ...++++||++
T Consensus        15 g~g~~g~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~   92 (272)
T cd06637          15 GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG   92 (272)
T ss_pred             eecCCeEEEEEEEcCCCcEEEEEEEEcCCcc--HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCC
Confidence            4456788999999999999999998744322  24678899999998 799999999998753      35789999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+++.....             ..+++..+..++.|++.++.|||+++++|+|++|+||+++.++.++|+|||++.
T Consensus        93 ~~~L~~~l~~~~~-------------~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          93 AGSVTDLIKNTKG-------------NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             CCcHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence            9999999876432             247889999999999999999999999999999999999999999999999987


Q ss_pred             CCCc-----ccccceeeeeecccCCC
Q psy2674         155 DTYQ-----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~-----~~~~~~~~~~~pe~~~~  175 (183)
                      ....     ....++..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~g~~~y~aPE~~~~  185 (272)
T cd06637         160 QLDRTVGRRNTFIGTPYWMAPEVIAC  185 (272)
T ss_pred             ecccccccCCcccccccccCHhHhcc
Confidence            5432     23456788999999863

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.94  E-value=2e-25  Score=163.40  Aligned_cols=161  Identities=17%  Similarity=0.262  Sum_probs=137.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++....+++.+++|.+..... ......+.+|++.++.++|+||+++++.+.+.+..++++||+++++|.+
T Consensus         9 g~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (264)
T cd06626           9 GGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEE   88 (264)
T ss_pred             ecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHH
Confidence            344567889998888999999999874433 3456789999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+....               .+++..+..++.+++.++.+||+.+++|+||+|+||+++.++.++|+|||++...... 
T Consensus        89 ~~~~~~---------------~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~  153 (264)
T cd06626          89 LLEHGR---------------ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT  153 (264)
T ss_pred             HHhhcC---------------CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence            887543               3778889999999999999999999999999999999999999999999998754332 


Q ss_pred             --------cccceeeeeecccCCCcc
Q psy2674         160 --------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       160 --------~~~~~~~~~~pe~~~~~~  177 (183)
                              ...++..|+|||++.+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~PE~~~~~~  179 (264)
T cd06626         154 TTMGEEVQSLAGTPAYMAPEVITGGK  179 (264)
T ss_pred             CcccccccCCcCCcCccChhhccCCC
Confidence                    133466899999987654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.94  E-value=1.6e-25  Score=164.19  Aligned_cols=161  Identities=14%  Similarity=0.251  Sum_probs=133.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-----CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-----DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--.++.||++.. .++..+|+|.+....     .......+.+|++.++.++|+||+++.+++.+.+..++++||++++
T Consensus         9 g~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   87 (265)
T cd06631           9 GKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGG   87 (265)
T ss_pred             eccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCC
Confidence            3345677888765 478899999986332     1233456889999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++....               .+++..+..++.|++.++++||+.+++|+||+|+||+++.++.++++|||++...
T Consensus        88 ~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  152 (265)
T cd06631          88 SISSILNRFG---------------PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL  152 (265)
T ss_pred             cHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence            9999987653               4788899999999999999999999999999999999999999999999998643


Q ss_pred             Cc-----------ccccceeeeeecccCCCccc
Q psy2674         157 YQ-----------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~-----------~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..           ....++..|+|||+..+..+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  185 (265)
T cd06631         153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGY  185 (265)
T ss_pred             hhccccccccccccccCCCccccChhhhcCCCC
Confidence            21           13456788999999876543

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=5.3e-25  Score=161.95  Aligned_cols=168  Identities=26%  Similarity=0.417  Sum_probs=132.2

Q ss_pred             CCCCCceeeeccCCC---CcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc------cEEEEe
Q psy2674           2 SLIPNARGLKASDPQ---DTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP------HYLLLE   71 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~---~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e   71 (183)
                      |.-.++.||.+....   .+..+|+|.+... ........+.+|++.++.++|+|++++++.+...+.      .++++|
T Consensus         8 g~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e   87 (273)
T cd05035           8 GEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILP   87 (273)
T ss_pred             CcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEe
Confidence            445667788776544   4588999998743 344455688999999999999999999998866544      789999


Q ss_pred             eCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEeccc
Q psy2674          72 YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG  151 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg  151 (183)
                      |+++++|...+......         .....+++..+..++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||
T Consensus        88 ~~~~~~l~~~l~~~~~~---------~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg  158 (273)
T cd05035          88 FMKHGDLHSFLLYSRLG---------GLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFG  158 (273)
T ss_pred             ccCCCCHHHHHHHhhcc---------CCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCcc
Confidence            99999999988654211         011257889999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcccc-------cceeeeeecccCCCccc
Q psy2674         152 LSKDTYQKEY-------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       152 ~a~~~~~~~~-------~~~~~~~~pe~~~~~~~  178 (183)
                      +++.......       ..+..|+|||.+.+..+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  192 (273)
T cd05035         159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVY  192 (273)
T ss_pred             ceeeccccccccccccccCCccccCHhhcccCCC
Confidence            9985543321       22456899998866543

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.94  E-value=2.5e-25  Score=162.28  Aligned_cols=163  Identities=18%  Similarity=0.259  Sum_probs=137.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++....++..+++|.+... ........+.+|+++++.++|+|++++++.+..++..++++||+++++|.+
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (256)
T cd08220           9 GRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAE   88 (256)
T ss_pred             cccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHH
Confidence            4445678899889899999999998743 234445688999999999999999999999998899999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~~~  159 (183)
                      ++.....             ..+++..+..++.+++.++.+||+++++|+||+|+||+++. ++.++++|||++......
T Consensus        89 ~~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (256)
T cd08220          89 YIQKRCN-------------SLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK  155 (256)
T ss_pred             HHHHhcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence            9976432             24788999999999999999999999999999999999975 456899999998855432


Q ss_pred             ----cccceeeeeecccCCCcc
Q psy2674         160 ----EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~  177 (183)
                          ...++..|+|||.+.+..
T Consensus       156 ~~~~~~~~~~~y~aPE~~~~~~  177 (256)
T cd08220         156 SKAYTVVGTPCYISPELCEGKP  177 (256)
T ss_pred             ccccccccCCcccCchhccCCC
Confidence                345677899999987654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG0608|consensus

Probab=99.94  E-value=2.1e-26  Score=179.34  Aligned_cols=139  Identities=20%  Similarity=0.297  Sum_probs=125.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|+-++++|-.+....+...+|.|.+.+.+  ...+......|-.+|..-..+-+|+++-.|.+.+.+|+||+|++||++
T Consensus       637 iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDm  716 (1034)
T KOG0608|consen  637 IGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDM  716 (1034)
T ss_pred             ecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccH
Confidence            477889999988888899999999987543  233445677899999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      .+++.+.+               .+.|..++.+++++.++|++.|..|+|||||||+|||||.+|.+||.|||++.
T Consensus       717 MSLLIrmg---------------IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCT  777 (1034)
T KOG0608|consen  717 MSLLIRMG---------------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  777 (1034)
T ss_pred             HHHHHHhc---------------cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccc
Confidence            99999885               58899999999999999999999999999999999999999999999999985

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.94  E-value=2.4e-25  Score=166.55  Aligned_cols=162  Identities=22%  Similarity=0.273  Sum_probs=131.8

Q ss_pred             CCCCCceeeeccCCCCcc----eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTS----VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.+|++....++.    .+|+|.+...........+.+|+.+++.++|+||+++++++..+ ..++++|++++++
T Consensus        16 g~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~v~e~~~~g~   94 (303)
T cd05110          16 GSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQLVTQLMPHGC   94 (303)
T ss_pred             ccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-CceeeehhcCCCC
Confidence            445667788887766665    57888887655555555788999999999999999999998754 4678999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.|+.|||+++++|+||+|+||+++.++.+||+|||++....
T Consensus        95 l~~~~~~~~~--------------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~  160 (303)
T cd05110          95 LLDYVHEHKD--------------NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE  160 (303)
T ss_pred             HHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEcccccccccc
Confidence            9998876432              47888999999999999999999999999999999999999999999999997543


Q ss_pred             cc-------cccceeeeeecccCCCccc
Q psy2674         158 QK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..       ....+..|+|||.+.+..+
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~  188 (303)
T cd05110         161 GDEKEYNADGGKMPIKWMALECIHYRKF  188 (303)
T ss_pred             CcccccccCCCccccccCCHHHhccCCC
Confidence            22       1223567999999877654

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.94  E-value=2.8e-25  Score=162.86  Aligned_cols=163  Identities=23%  Similarity=0.265  Sum_probs=138.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++....++..+++|++...........+.+|++.++.++|+|++++.+.+..++..++++|++++++|.+.
T Consensus        10 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~   89 (267)
T cd06610          10 GVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDI   89 (267)
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHH
Confidence            44567889999988899999999987554444566889999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....            ...+++..+..++.|++.++.+||+++++|+|++|+||++++++.++++|||++......  
T Consensus        90 ~~~~~~------------~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~  157 (267)
T cd06610          90 MKSSYP------------RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD  157 (267)
T ss_pred             HHHhcc------------cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence            976421            024788999999999999999999999999999999999999999999999998744432  


Q ss_pred             -------cccceeeeeecccCCCc
Q psy2674         160 -------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 -------~~~~~~~~~~pe~~~~~  176 (183)
                             ...++..|++||++.+.
T Consensus       158 ~~~~~~~~~~~~~~y~~Pe~~~~~  181 (267)
T cd06610         158 RTRKVRKTFVGTPCWMAPEVMEQV  181 (267)
T ss_pred             ccccccccccCChhhcChHHHccc
Confidence                   22467789999997654

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.94  E-value=2e-25  Score=170.37  Aligned_cols=159  Identities=20%  Similarity=0.307  Sum_probs=132.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------CccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~   74 (183)
                      |.-..+.|+.+.+..++..+|+|.+... .+......+.+|+.+++.++|+||+++++++...      ...++++||++
T Consensus        25 g~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~  104 (353)
T cd07850          25 GSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMD  104 (353)
T ss_pred             ccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccC
Confidence            4456788999999999999999998632 3344445678899999999999999999998643      24689999997


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       ++|.+.+..                 .+++..+..++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||++.
T Consensus       105 -~~l~~~~~~-----------------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~  166 (353)
T cd07850         105 -ANLCQVIQM-----------------DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  166 (353)
T ss_pred             -CCHHHHHhh-----------------cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence             688887743                 27788889999999999999999999999999999999999999999999998


Q ss_pred             CCCcc----cccceeeeeecccCCCccc
Q psy2674         155 DTYQK----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       155 ~~~~~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      .....    ...++..|+|||.+.+..+
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~  194 (353)
T cd07850         167 TAGTSFMMTPYVVTRYYRAPEVILGMGY  194 (353)
T ss_pred             eCCCCCCCCCCcccccccCHHHHhCCCC
Confidence            55432    3456788999999877655

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.93  E-value=1.2e-25  Score=167.62  Aligned_cols=159  Identities=21%  Similarity=0.283  Sum_probs=134.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC----HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD----DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-..+.+|++.+..++++|++|.+.....    ......+.+|++.++.++|+||+++++++.+++..++++||+ +++
T Consensus         9 g~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~   87 (298)
T cd07841           9 GEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETD   87 (298)
T ss_pred             eeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCC
Confidence            345678899999999999999999874432    223345678999999999999999999999988999999999 799


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.||.+||+++++|+||+|+||+++.++.++|+|||++....
T Consensus        88 L~~~i~~~~~--------------~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~  153 (298)
T cd07841          88 LEKVIKDKSI--------------VLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFG  153 (298)
T ss_pred             HHHHHhccCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence            9999865431              48899999999999999999999999999999999999999999999999997554


Q ss_pred             cc-----cccceeeeeecccCCC
Q psy2674         158 QK-----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~~-----~~~~~~~~~~pe~~~~  175 (183)
                      ..     ...++.+|+|||.+.+
T Consensus       154 ~~~~~~~~~~~~~~y~aPE~~~~  176 (298)
T cd07841         154 SPNRKMTHQVVTRWYRAPELLFG  176 (298)
T ss_pred             CCCccccccccceeeeCHHHHhC
Confidence            32     2234678999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.93  E-value=2.9e-25  Score=164.83  Aligned_cols=160  Identities=18%  Similarity=0.246  Sum_probs=136.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++.+..++..+++|.+..... ...+.+.+|+.+++.++|+|++++++++..++..++++||+++++|.++
T Consensus        28 g~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~  106 (285)
T cd06648          28 GEGSTGIVCIATDKSTGRQVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDI  106 (285)
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHH
Confidence            344567889998888999999999864322 3345688999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++++|||++......  
T Consensus       107 ~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~  170 (285)
T cd06648         107 VTHT----------------RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP  170 (285)
T ss_pred             HHhC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence            8652                4788899999999999999999999999999999999999999999999988744322  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++.+|+|||...+.++
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~  192 (285)
T cd06648         171 RRKSLVGTPYWMAPEVISRLPY  192 (285)
T ss_pred             ccccccCCccccCHHHhcCCCC
Confidence               3456889999999877554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.93  E-value=9.6e-26  Score=165.00  Aligned_cols=159  Identities=23%  Similarity=0.322  Sum_probs=129.5

Q ss_pred             CCCCCceeeeccCCCCc-------ceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDT-------SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-.++.||++.....+       .++++|.+.... ....+.+.+|+.+++.++|||++++++++..+...+++|||++
T Consensus         4 g~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~   82 (258)
T cd05078           4 GQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVK   82 (258)
T ss_pred             CcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCC
Confidence            45566778877765443       448888875332 3334578889999999999999999999998889999999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc--------eE
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--------VK  146 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~--------~k  146 (183)
                      +++|.+++.....              .+++...+.++.|++.|+.|||+++++||||||+||+++.++.        ++
T Consensus        83 ~g~L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~  148 (258)
T cd05078          83 FGSLDTYLKKNKN--------------LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIK  148 (258)
T ss_pred             CCcHHHHHhcCCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEE
Confidence            9999999876532              4788899999999999999999999999999999999976654        69


Q ss_pred             EecccCCCCCCcc-cccceeeeeecccCCC
Q psy2674         147 ISLSGLSKDTYQK-EYYKYRWVICSNIAEG  175 (183)
Q Consensus       147 i~dfg~a~~~~~~-~~~~~~~~~~pe~~~~  175 (183)
                      ++|||++...... ...++..|+|||++.+
T Consensus       149 l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~  178 (258)
T cd05078         149 LSDPGISITVLPKEILLERIPWVPPECIEN  178 (258)
T ss_pred             ecccccccccCCchhccccCCccCchhccC
Confidence            9999998755443 3456778999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.93  E-value=2.3e-25  Score=165.93  Aligned_cols=160  Identities=17%  Similarity=0.226  Sum_probs=135.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++....++..+|+|.+.... ......+.+|+.+++.++|+|++++++.+...+..++++||+++++|.+.
T Consensus        29 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  107 (292)
T cd06657          29 GEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI  107 (292)
T ss_pred             CCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHH
Confidence            44566789999999999999999986433 23455788999999999999999999999999999999999999999987


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++...+.++.|++.++.+||++|++|+||+|+||+++.++.++++|||++......  
T Consensus       108 ~~~~----------------~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~  171 (292)
T cd06657         108 VTHT----------------RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  171 (292)
T ss_pred             HhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc
Confidence            6432                4788899999999999999999999999999999999999999999999998754332  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||...+..+
T Consensus       172 ~~~~~~~~~~y~~pE~~~~~~~  193 (292)
T cd06657         172 RRKSLVGTPYWMAPELISRLPY  193 (292)
T ss_pred             cccccccCccccCHHHhcCCCC
Confidence               2456788999999876443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.93  E-value=5.1e-25  Score=162.90  Aligned_cols=162  Identities=27%  Similarity=0.391  Sum_probs=132.7

Q ss_pred             CCCCCceeeeccC----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASD----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~   75 (183)
                      |-...+.+|++..    ..++..+|+|.+...........+.+|++.++.++|+||+++.+++..  ....++++||+++
T Consensus        13 g~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~   92 (284)
T cd05038          13 GEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPS   92 (284)
T ss_pred             ccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCC
Confidence            3445677777764    346899999999855444445688999999999999999999999887  5578999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++.....              .+++..++.++.|++.|+.+||+++++|+||+|.||+++.++.++++|||++..
T Consensus        93 ~~l~~~l~~~~~--------------~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~  158 (284)
T cd05038          93 GSLRDYLQRHRD--------------QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKV  158 (284)
T ss_pred             CCHHHHHHhCcc--------------ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccc
Confidence            999999976532              488899999999999999999999999999999999999999999999999986


Q ss_pred             CCcc--------cccceeeeeecccCCCcc
Q psy2674         156 TYQK--------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       156 ~~~~--------~~~~~~~~~~pe~~~~~~  177 (183)
                      ....        ...++..|.+||.+.+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  188 (284)
T cd05038         159 LPEDKDYYYVKEPGESPIFWYAPECLRTSK  188 (284)
T ss_pred             cccCCcceeccCCCCCcccccCcHHHccCC
Confidence            6522        112234588999876544

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.93  E-value=4.6e-25  Score=160.66  Aligned_cols=166  Identities=18%  Similarity=0.294  Sum_probs=141.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |....+.+|++.+..++.++++|.+.... .......+.+|++.++.++|+|++++.+.+.+++..++++|++++++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (258)
T cd08215           9 GKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQ   88 (258)
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHH
Confidence            44567889999999999999999987443 34556678999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+.....           ....+++.....++.+++.++.+||+++++|+|++|+||+++.++.++|+|||++...... 
T Consensus        89 ~l~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          89 KIKKQKK-----------EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             HHHHhhc-----------cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            9877531           0125889999999999999999999999999999999999999999999999998755443 


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...+++.|+|||...+..+
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~~  180 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQNKPY  180 (258)
T ss_pred             ceecceeeeecccChhHhccCCC
Confidence                2456778999998776543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=4.2e-25  Score=160.68  Aligned_cols=161  Identities=26%  Similarity=0.364  Sum_probs=138.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++....+++++++|.+.... .....+.+.+|+++++.++|+|++++.+++.+++..++++|++++++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   88 (254)
T cd06627           9 GRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQ   88 (254)
T ss_pred             cccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHH
Confidence            34466789999888999999999987443 23455688999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE  160 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~  160 (183)
                      .+....               .+++..+..++.|++.++.+||++|++|+||+|.||+++.++.++|+|||++.......
T Consensus        89 ~~~~~~---------------~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  153 (254)
T cd06627          89 IIKKFG---------------PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS  153 (254)
T ss_pred             HHHhcc---------------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence            987653               48899999999999999999999999999999999999999999999999998655432


Q ss_pred             -----ccceeeeeecccCCCcc
Q psy2674         161 -----YYKYRWVICSNIAEGRR  177 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~  177 (183)
                           ..++..|+|||...+..
T Consensus       154 ~~~~~~~~~~~y~~pe~~~~~~  175 (254)
T cd06627         154 KDDASVVGTPYWMAPEVIEMSG  175 (254)
T ss_pred             ccccccccchhhcCHhhhcCCC
Confidence                 35577899999986654

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.93  E-value=8.8e-25  Score=160.84  Aligned_cols=168  Identities=26%  Similarity=0.383  Sum_probs=131.2

Q ss_pred             CCCCCceeeeccCCCCcc--eEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------CccEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTS--VLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------DPHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~--~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~   72 (183)
                      |--.++.||++....++.  .+|+|.+... ......+.+.+|++.++.++|+||+++++.+...      ...++++||
T Consensus         8 g~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~   87 (272)
T cd05075           8 GEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPF   87 (272)
T ss_pred             CcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEe
Confidence            445667888887766654  6899988743 3444566788999999999999999999987532      246899999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      +++++|.+++......         .....+++.....++.|++.|+.|||+++++|+||||+||+++.++.++|+|||+
T Consensus        88 ~~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~  158 (272)
T cd05075          88 MKHGDLHSFLLYSRLG---------DCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGL  158 (272)
T ss_pred             CCCCcHHHHHHHhccc---------CCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCc
Confidence            9999999887543210         0112478899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         153 SKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       153 a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      +.......       ...+..|++||...+..+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  191 (272)
T cd05075         159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVY  191 (272)
T ss_pred             ccccCcccceecCCcccCCcccCCHHHccCCCc
Confidence            98654322       123456899999876544

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.93  E-value=1.6e-25  Score=162.07  Aligned_cols=153  Identities=12%  Similarity=0.122  Sum_probs=127.5

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHh
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA   84 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   84 (183)
                      ..++|+.+.+..+++.+|+|.+....      ...+|...+....|||++++++++.+.+..++++||+++++|.+.+..
T Consensus         5 ~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   78 (237)
T cd05576           5 VIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK   78 (237)
T ss_pred             ccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence            35669999999999999999986432      223344455556799999999999999999999999999999999876


Q ss_pred             hccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--ccc
Q psy2674          85 TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--EYY  162 (183)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--~~~  162 (183)
                      ..               .+++..+..++.|++.|+.+||+++++|+||+|+||+++.++.++++|||.+......  ...
T Consensus        79 ~~---------------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~  143 (237)
T cd05576          79 FL---------------NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEA  143 (237)
T ss_pred             hc---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCC
Confidence            53               4889999999999999999999999999999999999999999999999987654432  334


Q ss_pred             ceeeeeecccCCCccc
Q psy2674         163 KYRWVICSNIAEGRRL  178 (183)
Q Consensus       163 ~~~~~~~pe~~~~~~~  178 (183)
                      ++..|+|||...+.++
T Consensus       144 ~~~~y~aPE~~~~~~~  159 (237)
T cd05576         144 VENMYCAPEVGGISEE  159 (237)
T ss_pred             cCccccCCcccCCCCC
Confidence            4677999999876544

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>KOG4257|consensus

Probab=99.93  E-value=8.7e-26  Score=175.59  Aligned_cols=157  Identities=26%  Similarity=0.430  Sum_probs=132.1

Q ss_pred             CCCceeeeccC----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           4 IPNARGLKASD----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         4 ~~~~~~~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      -.+|.||.+.-    .....-||||..+...+++..+.|.+|..+++.++||||++++|+|.+ .+.|++||.++-|.|.
T Consensus       400 GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~~GELr  478 (974)
T KOG4257|consen  400 GQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAPLGELR  478 (974)
T ss_pred             CcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecccchhHH
Confidence            33444544432    445567888988876777778899999999999999999999999975 5899999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .++......++.|++.++.|||+..+|||||..+|||+....-+|++|||+++-...+
T Consensus       479 ~yLq~nk~--------------sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~  544 (974)
T KOG4257|consen  479 EYLQQNKD--------------SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD  544 (974)
T ss_pred             HHHHhccc--------------cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence            99988764              6888999999999999999999999999999999999999999999999999988777


Q ss_pred             cccc------eeeeeecccCCC
Q psy2674         160 EYYK------YRWVICSNIAEG  175 (183)
Q Consensus       160 ~~~~------~~~~~~pe~~~~  175 (183)
                      .+|.      .--|++||.+.=
T Consensus       545 ~yYkaS~~kLPIKWmaPESINf  566 (974)
T KOG4257|consen  545 AYYKASRGKLPIKWMAPESINF  566 (974)
T ss_pred             chhhccccccceeecCccccch
Confidence            6664      123567777653

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.93  E-value=4.2e-25  Score=163.39  Aligned_cols=159  Identities=18%  Similarity=0.165  Sum_probs=128.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHH---HHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREI---DLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~---~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |-..++.||++.+..+++.||+|.+.....  .........|.   ..++...|++++.+.+.+..++..++++||+.++
T Consensus         3 g~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~   82 (278)
T cd05606           3 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG   82 (278)
T ss_pred             ccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCC
Confidence            455678899999999999999999864321  11111233333   3444457999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|...+....               .+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||++...
T Consensus        83 ~L~~~l~~~~---------------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~  147 (278)
T cd05606          83 DLHYHLSQHG---------------VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  147 (278)
T ss_pred             cHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence            9998886542               4889999999999999999999999999999999999999999999999998754


Q ss_pred             Cc---ccccceeeeeecccCCC
Q psy2674         157 YQ---KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       157 ~~---~~~~~~~~~~~pe~~~~  175 (183)
                      ..   ....++..|+|||++.+
T Consensus       148 ~~~~~~~~~~~~~y~aPE~~~~  169 (278)
T cd05606         148 SKKKPHASVGTHGYMAPEVLQK  169 (278)
T ss_pred             CccCCcCcCCCcCCcCcHHhcC
Confidence            33   23457888999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.93  E-value=1e-25  Score=166.90  Aligned_cols=161  Identities=22%  Similarity=0.321  Sum_probs=134.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++.+..++..+++|.+.... .......+.+|++.++.++|+||+++++++.+.+..++++||+. ++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~   87 (284)
T cd07860           9 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKK   87 (284)
T ss_pred             cCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHH
Confidence            44567789999999999999999986332 22233468899999999999999999999999999999999997 68888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++.....             ..+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.++++|||++...... 
T Consensus        88 ~~~~~~~-------------~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~  154 (284)
T cd07860          88 FMDASPL-------------SGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  154 (284)
T ss_pred             HHHhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence            8865422             25788999999999999999999999999999999999999999999999998754322 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ...++.+|+|||+..+.
T Consensus       155 ~~~~~~~~~~~y~aPE~~~~~  175 (284)
T cd07860         155 RTYTHEVVTLWYRAPEILLGC  175 (284)
T ss_pred             cccccccccccccCCeEEecC
Confidence                23346789999987653

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.93  E-value=5.2e-25  Score=163.33  Aligned_cols=161  Identities=20%  Similarity=0.275  Sum_probs=138.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++.+..++..+++|.+.....  ..+.+.+|++.++.++|+|++++++.+..++..++++||+++++|.++
T Consensus        28 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  105 (286)
T cd06614          28 GEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDI  105 (286)
T ss_pred             cCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHH
Confidence            334567899999988999999999874433  345788999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .++...++.++.+++.++.+||+.|++|+|++|+||+++.++.++|+|||++......  
T Consensus       106 l~~~~~--------------~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  171 (286)
T cd06614         106 ITQNFV--------------RMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS  171 (286)
T ss_pred             HHHhcc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence            987641              4888999999999999999999999999999999999999999999999988754332  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||++.+.++
T Consensus       172 ~~~~~~~~~~y~~PE~~~~~~~  193 (286)
T cd06614         172 KRNSVVGTPYWMAPEVIKRKDY  193 (286)
T ss_pred             hhccccCCcccCCHhHhcCCCC
Confidence               2345678999999877654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.93  E-value=1.7e-25  Score=167.90  Aligned_cols=163  Identities=23%  Similarity=0.300  Sum_probs=132.5

Q ss_pred             CCCCCceeeeccCCC--CcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQ--DTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~--~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~   75 (183)
                      |....+.+|++.+..  ++..+|+|.+....  .....+.+.+|+.+++.++||||+++.+++.+.  ...++++||++ 
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-   87 (316)
T cd07842           9 GRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAE-   87 (316)
T ss_pred             ccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCC-
Confidence            445678899999988  89999999987532  122234678899999999999999999999987  78999999998 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc----CCceEEeccc
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS----DLSVKISLSG  151 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~----~~~~ki~dfg  151 (183)
                      ++|.+.+......          ....+++..++.++.|++.++.|||+.+++|+||+|+||+++.    ++.++++|||
T Consensus        88 ~~l~~~~~~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg  157 (316)
T cd07842          88 HDLWQIIKFHRQA----------KRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLG  157 (316)
T ss_pred             cCHHHHHHhhccC----------CCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence            6787776544221          1125788999999999999999999999999999999999998    9999999999


Q ss_pred             CCCCCCc--------ccccceeeeeecccCCC
Q psy2674         152 LSKDTYQ--------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       152 ~a~~~~~--------~~~~~~~~~~~pe~~~~  175 (183)
                      ++.....        +...++.+|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (316)
T cd07842         158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLG  189 (316)
T ss_pred             cccccCCCcccccccCCccccccccCHHHHhC
Confidence            9885432        23456788999998765

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.93  E-value=2.9e-25  Score=165.40  Aligned_cols=160  Identities=18%  Similarity=0.243  Sum_probs=135.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++.+..++..+++|.+...... ..+.+.+|+.+++.++|||++++.+.+..++..++++||+++++|.++
T Consensus        28 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~-~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  106 (293)
T cd06647          28 GQGASGTVYTAIDVATGQEVAIKQMNLQQQP-KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV  106 (293)
T ss_pred             cCCCCeEEEEEEEcCCCCEEEEEEeccccch-HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHH
Confidence            4456788999988889999999998643333 345788999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                .+++..+..++.|++.++.+||+++++|+|++|+||+++.++.++|+|||++......  
T Consensus       107 ~~~~----------------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~  170 (293)
T cd06647         107 VTET----------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (293)
T ss_pred             Hhhc----------------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence            8653                3678888999999999999999999999999999999999999999999988754332  


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|++||.+.+..+
T Consensus       171 ~~~~~~~~~~y~~PE~~~~~~~  192 (293)
T cd06647         171 KRSTMVGTPYWMAPEVVTRKAY  192 (293)
T ss_pred             ccccccCChhhcCchhhccCCC
Confidence               2346778999999876544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.93  E-value=6.2e-25  Score=161.13  Aligned_cols=160  Identities=23%  Similarity=0.250  Sum_probs=128.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.||++....+ ..+|+|.+......  .+.+.+|+++++.++|+||+++++.+. ++..++++||+++++|.++
T Consensus        15 g~g~~~~v~~~~~~~~-~~valK~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~   90 (262)
T cd05071          15 GQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDF   90 (262)
T ss_pred             CCCCCCcEEEEEecCC-ceEEEEecccCccC--HHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHH
Confidence            4455678888876555 45999998743322  246889999999999999999999875 4568999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.++.++|+.+++|+||+|.||+++.++.++|+|||.+....... 
T Consensus        91 ~~~~~~-------------~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~  157 (262)
T cd05071          91 LKGEMG-------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  157 (262)
T ss_pred             Hhhccc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence            975421             247888999999999999999999999999999999999999999999999987544322 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||...+..+
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~  180 (262)
T cd05071         158 TARQGAKFPIKWTAPEAALYGRF  180 (262)
T ss_pred             ccccCCcccceecCHhHhccCCC
Confidence                 223457999999876544

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>KOG4721|consensus

Probab=99.93  E-value=1.8e-26  Score=177.79  Aligned_cols=152  Identities=21%  Similarity=0.280  Sum_probs=129.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-+.+-||.  ..-.++.||||++...        -..+|+.|++++|+||+.+.|+|....-++|+||||+.|.|...
T Consensus       133 GSGaQGAVF~--Grl~netVAVKKV~el--------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V  202 (904)
T KOG4721|consen  133 GSGAQGAVFL--GRLHNETVAVKKVREL--------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV  202 (904)
T ss_pred             ccCcccceee--eeccCceehhHHHhhh--------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence            4445566773  3556789999997522        23578999999999999999999887778899999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      ++...               .+.....+.|..+|+.|+.|||.+-|||||||.-||||..+..+||+|||.++....   
T Consensus       203 Lka~~---------------~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~ST  267 (904)
T KOG4721|consen  203 LKAGR---------------PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKST  267 (904)
T ss_pred             HhccC---------------ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhh
Confidence            98763               588999999999999999999999999999999999999999999999999885443   


Q ss_pred             -ccccceeeeeecccCCCccc
Q psy2674         159 -KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~~  178 (183)
                       -.+.||..|||||++++.|-
T Consensus       268 kMSFaGTVaWMAPEvIrnePc  288 (904)
T KOG4721|consen  268 KMSFAGTVAWMAPEVIRNEPC  288 (904)
T ss_pred             hhhhhhhHhhhCHHHhhcCCc
Confidence             35788999999999988553

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.93  E-value=8.7e-25  Score=159.66  Aligned_cols=158  Identities=19%  Similarity=0.284  Sum_probs=127.6

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEe-cCCccEEEEeeCCCCCHHHH
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICR-DGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~   81 (183)
                      .-..+.+|++..  .+..+++|.+.....   .+.+.+|+.+++.++|++++++++++. ..+..++++||+++++|.++
T Consensus        16 ~g~~~~v~~~~~--~~~~~~~k~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~   90 (256)
T cd05082          16 KGEFGDVMLGDY--RGNKVAVKCIKNDAT---AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY   90 (256)
T ss_pred             ccCCCeEEEEEE--cCCcEEEEEeCCCch---HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHH
Confidence            344567776643  478899999864332   346889999999999999999999765 45678999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....             ..+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++++|||++......  
T Consensus        91 ~~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~  157 (256)
T cd05082          91 LRSRGR-------------SVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD  157 (256)
T ss_pred             HHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCC
Confidence            876432             24788899999999999999999999999999999999999999999999998854332  


Q ss_pred             cccceeeeeecccCCCccc
Q psy2674         160 EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....+..|+|||+..+..+
T Consensus       158 ~~~~~~~y~aPE~~~~~~~  176 (256)
T cd05082         158 TGKLPVKWTAPEALREKKF  176 (256)
T ss_pred             CCccceeecCHHHHccCCC
Confidence            2233567999999877544

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.93  E-value=2.5e-25  Score=166.55  Aligned_cols=160  Identities=23%  Similarity=0.321  Sum_probs=129.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc--------cEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP--------HYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--------~~lv~e~   72 (183)
                      |....+.||++.+..++..+|+|.+.... .......+.+|+++++.++||||+++++++...+.        .++++||
T Consensus        21 g~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~  100 (310)
T cd07865          21 GQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEF  100 (310)
T ss_pred             ecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcC
Confidence            44567889999999999999999986332 22222355789999999999999999999876543        4999999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++ ++|.+.+.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||+
T Consensus       101 ~~-~~l~~~l~~~~~--------------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865         101 CE-HDLAGLLSNKNV--------------KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             CC-cCHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence            97 688887765421              488999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc---------cccceeeeeecccCCCc
Q psy2674         153 SKDTYQK---------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       153 a~~~~~~---------~~~~~~~~~~pe~~~~~  176 (183)
                      +......         ...++..|+|||++.+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  198 (310)
T cd07865         166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE  198 (310)
T ss_pred             cccccCCcccCCCCccCcccCccccCcHHhcCC
Confidence            8744321         23456789999987653

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.93  E-value=3.8e-25  Score=163.46  Aligned_cols=158  Identities=22%  Similarity=0.309  Sum_probs=129.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC--CccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG--DPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   78 (183)
                      |.-..+.+|++.+..++..+|+|.+.............+|+..++.+ +|+|++++++++.++  +..++++||++ ++|
T Consensus         8 g~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l   86 (282)
T cd07831           8 GEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD-MNL   86 (282)
T ss_pred             cccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-ccH
Confidence            34456789999999999999999987543222222446788888888 599999999999987  88999999998 688


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.+.....              .+++..++.++.|++.|+.+||+.+++|+||+|+||+++. +.++|+|||++.....
T Consensus        87 ~~~l~~~~~--------------~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~  151 (282)
T cd07831          87 YELIKGRKR--------------PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYS  151 (282)
T ss_pred             HHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence            887765422              4889999999999999999999999999999999999999 9999999999985533


Q ss_pred             c----cccceeeeeecccCCC
Q psy2674         159 K----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~----~~~~~~~~~~pe~~~~  175 (183)
                      .    ...++.+|+|||.+.+
T Consensus       152 ~~~~~~~~~~~~y~aPE~~~~  172 (282)
T cd07831         152 KPPYTEYISTRWYRAPECLLT  172 (282)
T ss_pred             CCCcCCCCCCcccCChhHhhc
Confidence            2    3456889999997643

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.93  E-value=3.6e-25  Score=162.65  Aligned_cols=169  Identities=24%  Similarity=0.403  Sum_probs=132.4

Q ss_pred             CCCCCceeeeccCCC------CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQ------DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |--..+.||++....      .++.+++|.+...........+.+|++.++.++||||+++++++.+++..++++||+++
T Consensus         4 g~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~   83 (269)
T cd05044           4 GSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEG   83 (269)
T ss_pred             ccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCC
Confidence            334556677666543      34789999887554444556788999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-----ceEEecc
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-----SVKISLS  150 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-----~~ki~df  150 (183)
                      ++|.+++........        ....+++..++.++.|++.++.|||+.+++|+||+|+||+++.++     .++++||
T Consensus        84 ~~L~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~df  155 (269)
T cd05044          84 GDLLSYLRDARVERF--------GPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDF  155 (269)
T ss_pred             CcHHHHHHHhhhccc--------CCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCc
Confidence            999999976432110        112477889999999999999999999999999999999998777     8999999


Q ss_pred             cCCCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         151 GLSKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       151 g~a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      |++.......       ...+..|+|||++.+..+
T Consensus       156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  190 (269)
T cd05044         156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKF  190 (269)
T ss_pred             ccccccccccccccCcccCCCccccCHHHHccCCc
Confidence            9987543321       223467999999876543

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.93  E-value=4.4e-25  Score=164.34  Aligned_cols=160  Identities=22%  Similarity=0.301  Sum_probs=130.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++.+..+++++++|.+.... .......+.+|++.++.++|+|++++++++.++...++++||++ ++|.+
T Consensus        11 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~~   89 (294)
T PLN00009         11 GEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLD-LDLKK   89 (294)
T ss_pred             cCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEeccc-ccHHH
Confidence            34456789999999999999999986432 22334567889999999999999999999999999999999997 68888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~~~  159 (183)
                      .+.....             ..+++..+..++.|++.|+.+||+++++|+||+|+||+++. ++.+|++|||++......
T Consensus        90 ~~~~~~~-------------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~  156 (294)
T PLN00009         90 HMDSSPD-------------FAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP  156 (294)
T ss_pred             HHHhCCC-------------CCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence            7755432             13578888899999999999999999999999999999984 567999999999754321


Q ss_pred             -----cccceeeeeecccCCC
Q psy2674         160 -----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~  175 (183)
                           ...++..|+|||.+.+
T Consensus       157 ~~~~~~~~~~~~y~~PE~~~~  177 (294)
T PLN00009        157 VRTFTHEVVTLWYRAPEILLG  177 (294)
T ss_pred             ccccccCceeecccCHHHHhC
Confidence                 2345788999998765

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.93  E-value=8.6e-25  Score=161.66  Aligned_cols=170  Identities=27%  Similarity=0.432  Sum_probs=136.1

Q ss_pred             CCCCCceeeeccCCC----CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec-CCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQ----DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD-GDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~   76 (183)
                      |--.++.||++....    .+..|++|.+...........+.+|+..++.++|+|++++++++.. +...+++++|++++
T Consensus        15 ~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~   94 (280)
T cd05043          15 QEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWG   94 (280)
T ss_pred             cccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCC
Confidence            334567788777655    4688999998766666667788999999999999999999998776 56789999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++.......       ......+++..++.++.+++.|+.|||+++++|+||+|+||+++.++.++++|||+++..
T Consensus        95 ~L~~~l~~~~~~~-------~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~  167 (280)
T cd05043          95 NLKLFLQQCRLGE-------ANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDL  167 (280)
T ss_pred             cHHHHHHhccccc-------cccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccc
Confidence            9999987653211       001135889999999999999999999999999999999999999999999999999865


Q ss_pred             Cccc-------ccceeeeeecccCCCccc
Q psy2674         157 YQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      ....       ..++..|+|||.+.+..+
T Consensus       168 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~  196 (280)
T cd05043         168 FPMDYHCLGDNENRPVKWMALESLVNKEY  196 (280)
T ss_pred             cCCceEEeCCCCCcchhccCHHHHhcCCC
Confidence            3321       223556999999876543

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=7.4e-25  Score=160.34  Aligned_cols=161  Identities=27%  Similarity=0.360  Sum_probs=132.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||++... ++..+++|.+......  .+.+.+|+..++.++|+|++++++++.++...++++|++++++|.++
T Consensus        15 g~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   91 (261)
T cd05034          15 GAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS--PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDF   91 (261)
T ss_pred             ccCcceEEEEEEEc-CCceEEEEEecCCccC--HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHH
Confidence            44556788888754 5578999998743322  34688999999999999999999999988899999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEY  161 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~  161 (183)
                      +.....             ..+++..+..++.+++.++.+||+++++|+||+|+||+++.++.++++|||++.....+..
T Consensus        92 i~~~~~-------------~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~  158 (261)
T cd05034          92 LKSGEG-------------KKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY  158 (261)
T ss_pred             Hhcccc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhh
Confidence            876431             2478899999999999999999999999999999999999999999999999876543321


Q ss_pred             ------cceeeeeecccCCCccc
Q psy2674         162 ------YKYRWVICSNIAEGRRL  178 (183)
Q Consensus       162 ------~~~~~~~~pe~~~~~~~  178 (183)
                            ..+..|+|||.+.+..+
T Consensus       159 ~~~~~~~~~~~y~~PE~~~~~~~  181 (261)
T cd05034         159 TAREGAKFPIKWTAPEAANYGRF  181 (261)
T ss_pred             hhhhccCCCccccCHHHhccCCc
Confidence                  22456999999877544

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.93  E-value=1.8e-24  Score=162.84  Aligned_cols=158  Identities=18%  Similarity=0.273  Sum_probs=133.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.++.+|++.+..++..+|+|.+...  ........+.+|++.++.++|+|++++++++.+++..++++||+. ++|.
T Consensus        34 g~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-g~l~  112 (317)
T cd06635          34 GHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL-GSAS  112 (317)
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-CCHH
Confidence            3445678999998889999999998632  233444578899999999999999999999999999999999998 6887


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+.....              .+++..+..++.+++.++.+||+++++|+||+|+||+++.++.++++|||++......
T Consensus       113 ~~~~~~~~--------------~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~  178 (317)
T cd06635         113 DLLEVHKK--------------PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA  178 (317)
T ss_pred             HHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence            77755432              5889999999999999999999999999999999999999999999999998755433


Q ss_pred             -cccceeeeeecccCC
Q psy2674         160 -EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 -~~~~~~~~~~pe~~~  174 (183)
                       ...++..|+|||.+.
T Consensus       179 ~~~~~~~~y~aPE~~~  194 (317)
T cd06635         179 NSFVGTPYWMAPEVIL  194 (317)
T ss_pred             ccccCCccccChhhhh
Confidence             455678899999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.93  E-value=7.3e-25  Score=162.43  Aligned_cols=160  Identities=21%  Similarity=0.303  Sum_probs=130.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEe-----cCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICR-----DGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-----~~~~~~lv~e~~~~   75 (183)
                      |....+.+|++.+..++..+++|++......  ...+.+|+.+++.+ +|+|++++++.+.     +++..++++||+++
T Consensus        27 g~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~  104 (286)
T cd06638          27 GKGTYGKVFKVLNKKNGSKAAVKILDPIHDI--DEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNG  104 (286)
T ss_pred             ccCCCcEEEEEEECCCCceeEEEeeccccch--HHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCC
Confidence            3455688999999999999999997643222  23677899999999 7999999999874     34568999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+.....           ....+++..+..++.|++.++.+||+++++|+|++|+||+++.++.++++|||++..
T Consensus       105 ~~L~~~l~~~~~-----------~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~  173 (286)
T cd06638         105 GSVTDLVKGFLK-----------RGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQ  173 (286)
T ss_pred             CCHHHHHHHhhc-----------cCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceee
Confidence            999998764321           112478888999999999999999999999999999999999999999999999875


Q ss_pred             CCcc-----cccceeeeeecccCC
Q psy2674         156 TYQK-----EYYKYRWVICSNIAE  174 (183)
Q Consensus       156 ~~~~-----~~~~~~~~~~pe~~~  174 (183)
                      ....     ...++..|+|||++.
T Consensus       174 ~~~~~~~~~~~~~~~~y~aPE~~~  197 (286)
T cd06638         174 LTSTRLRRNTSVGTPFWMAPEVIA  197 (286)
T ss_pred             cccCCCccccccCCCcccChhhhc
Confidence            4332     234678899999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.93  E-value=1.3e-24  Score=157.63  Aligned_cols=161  Identities=24%  Similarity=0.324  Sum_probs=139.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++.+..++..+++|.+..... .....+.+|++.++.++|++++++.+.+..++..++++||+++++|.+.
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~   87 (253)
T cd05122           9 GKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDL   87 (253)
T ss_pred             ccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHH
Confidence            344567899999988999999999975544 3445789999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..+..++.+++.++.+||+++++|+||+|+||+++.++.++|+|||.+......  
T Consensus        88 ~~~~~~--------------~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  153 (253)
T cd05122          88 LKSTNQ--------------TLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA  153 (253)
T ss_pred             HhhcCC--------------CCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence            876532              5889999999999999999999999999999999999999999999999999866543  


Q ss_pred             --cccceeeeeecccCCCcc
Q psy2674         160 --EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~  177 (183)
                        ...++..|+|||.+.+..
T Consensus       154 ~~~~~~~~~~~~PE~~~~~~  173 (253)
T cd05122         154 RNTMVGTPYWMAPEVINGKP  173 (253)
T ss_pred             ccceecCCcccCHHHHcCCC
Confidence              345577899999987654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.93  E-value=3.5e-25  Score=166.02  Aligned_cols=159  Identities=22%  Similarity=0.298  Sum_probs=130.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   78 (183)
                      |.-..+.+|++.+..++..||+|.+.... .......+.+|+.+++.++|+|++++.+++.+.  +..++++||++ ++|
T Consensus        16 g~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l   94 (309)
T cd07845          16 GEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDL   94 (309)
T ss_pred             eecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCC-CCH
Confidence            44566889999999999999999986332 222222456899999999999999999998765  46899999998 688


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.+.....              .+++..++.++.|++.++.+||+.+++|+||+|+||+++.++.++|+|||++.....
T Consensus        95 ~~~l~~~~~--------------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~  160 (309)
T cd07845          95 ASLLDNMPT--------------PFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL  160 (309)
T ss_pred             HHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence            888865422              588999999999999999999999999999999999999999999999999886543


Q ss_pred             c-----cccceeeeeecccCCC
Q psy2674         159 K-----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~-----~~~~~~~~~~pe~~~~  175 (183)
                      .     ....+.+|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~  182 (309)
T cd07845         161 PAKPMTPKVVTLWYRAPELLLG  182 (309)
T ss_pred             ccCCCCcccccccccChhhhcC
Confidence            2     2234678999999865

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PTZ00284 protein kinase; Provisional

Probab=99.93  E-value=4.5e-25  Score=174.10  Aligned_cols=160  Identities=14%  Similarity=0.154  Sum_probs=125.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC------CcceeeEEeEEecC-CccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD------HAHVVKMIGICRDG-DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~-~~~~lv~e~~~   74 (183)
                      |.-.++.||++.+..+++.||+|++.....  .......|+++++.++      |.+++.+.+++..+ +..++++|++.
T Consensus       138 G~G~fg~V~~a~~~~~~~~vAvK~i~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~g  215 (467)
T PTZ00284        138 GEGTFGKVVEAWDRKRKEYCAVKIVRNVPK--YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYG  215 (467)
T ss_pred             EeccCEEEEEEEEcCCCeEEEEEEEecchh--hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEeccC
Confidence            445678999999999999999999864321  2224455666666554      45688898888764 46789999874


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCC----------
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDL----------  143 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~----------  143 (183)
                       ++|.+++....               .+++..+..++.|++.||.|||+ .||+||||||+|||++..+          
T Consensus       216 -~~l~~~l~~~~---------------~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~  279 (467)
T PTZ00284        216 -PCLLDWIMKHG---------------PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA  279 (467)
T ss_pred             -CCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccc
Confidence             88888886653               48889999999999999999997 5999999999999997654          


Q ss_pred             ------ceEEecccCCCCCCc--ccccceeeeeecccCCCcccc
Q psy2674         144 ------SVKISLSGLSKDTYQ--KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       144 ------~~ki~dfg~a~~~~~--~~~~~~~~~~~pe~~~~~~~~  179 (183)
                            .+||+|||.+.....  ....+|++|+|||++.+..|+
T Consensus       280 ~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~  323 (467)
T PTZ00284        280 LPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWM  323 (467)
T ss_pred             cCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCC
Confidence                  499999998864432  346789999999999887663

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.93  E-value=7.6e-25  Score=161.17  Aligned_cols=157  Identities=17%  Similarity=0.150  Sum_probs=129.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--.++.||.+.+..++..+++|.+.......      .|+.....+ +|+|++++++.+..++..+++|||+++++|.+
T Consensus        25 g~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~------~e~~~~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~   98 (267)
T PHA03390         25 IDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA------IEPMVHQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFD   98 (267)
T ss_pred             cCCCceEEEEEEEcCCCcEEEEEEEehhhcch------hhHHHHHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHH
Confidence            44567889999999999999999986432111      122222222 79999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-ceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-~~ki~dfg~a~~~~~~  159 (183)
                      ++....               .+++..++.++.|++.|+.+||+.+++|+||+|+||+++.++ .++++|||++......
T Consensus        99 ~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~  163 (267)
T PHA03390         99 LLKKEG---------------KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP  163 (267)
T ss_pred             HHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC
Confidence            997653               488999999999999999999999999999999999999888 9999999998755433


Q ss_pred             -cccceeeeeecccCCCcccc
Q psy2674         160 -EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 -~~~~~~~~~~pe~~~~~~~~  179 (183)
                       ...++..|+|||++.+.+++
T Consensus       164 ~~~~~~~~y~aPE~~~~~~~~  184 (267)
T PHA03390        164 SCYDGTLDYFSPEKIKGHNYD  184 (267)
T ss_pred             ccCCCCCcccChhhhcCCCCC
Confidence             45567889999999876653

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.93  E-value=7.2e-25  Score=166.71  Aligned_cols=157  Identities=21%  Similarity=0.314  Sum_probs=131.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~   74 (183)
                      |.-+.+.||++.+..++..||+|.+... ........+.+|+++++.++|+||+++.+.+..+.      ..++++|++ 
T Consensus        24 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-  102 (343)
T cd07880          24 GSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-  102 (343)
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-
Confidence            4556788999999999999999998633 23334457889999999999999999999987654      348999998 


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|...+...                .+++..++.++.|++.|+.+||+.+++|+||+|+||+++.++.++++|||++.
T Consensus       103 ~~~l~~~~~~~----------------~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~  166 (343)
T cd07880         103 GTDLGKLMKHE----------------KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR  166 (343)
T ss_pred             CCCHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccc
Confidence            58898877532                48899999999999999999999999999999999999999999999999998


Q ss_pred             CCCcc--cccceeeeeecccCCC
Q psy2674         155 DTYQK--EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~--~~~~~~~~~~pe~~~~  175 (183)
                      .....  ...++++|++||++.+
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~  189 (343)
T cd07880         167 QTDSEMTGYVVTRWYRAPEVILN  189 (343)
T ss_pred             ccccCccccccCCcccCHHHHhC
Confidence            65443  3456789999998765

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.93  E-value=1.3e-24  Score=159.10  Aligned_cols=160  Identities=24%  Similarity=0.268  Sum_probs=129.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||++... ++..+|+|.+......  .+.+.+|+.+++.++|++++++++++. ++..++++||+++++|.++
T Consensus        15 g~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~--~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~   90 (260)
T cd05070          15 GNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS--PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDF   90 (260)
T ss_pred             ccccCceEEEEEec-CCceeEEEEecCCCCC--HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHH
Confidence            44566788888654 5667999998754332  346889999999999999999999875 4668999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.+++.++.+||+++++|+||+|.||++++++.++|+|||++....... 
T Consensus        91 ~~~~~~-------------~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05070          91 LKDGEG-------------RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             HHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence            875421             247889999999999999999999999999999999999999999999999987543322 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||...+..+
T Consensus       158 ~~~~~~~~~~~y~aPE~~~~~~~  180 (260)
T cd05070         158 TARQGAKFPIKWTAPEAALYGRF  180 (260)
T ss_pred             ccccCCCCCccccChHHHhcCCC
Confidence                 223457999999876543

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.93  E-value=2e-24  Score=162.35  Aligned_cols=158  Identities=18%  Similarity=0.293  Sum_probs=134.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-..+.+|++.+..++..+++|.+...  ........+.+|++.++.++|+|++++.+++.++...++++||+. +++.
T Consensus        30 g~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~  108 (313)
T cd06633          30 GHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-GSAS  108 (313)
T ss_pred             ccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-CCHH
Confidence            4456788999999999999999998632  233444578899999999999999999999999999999999997 6887


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +.+.....              .+++..++.++.|++.++.|||++|++|+||+|+||+++.++.++|+|||++..... 
T Consensus       109 ~~l~~~~~--------------~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~  174 (313)
T cd06633         109 DLLEVHKK--------------PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA  174 (313)
T ss_pred             HHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCC
Confidence            77765432              578899999999999999999999999999999999999999999999999875433 


Q ss_pred             ccccceeeeeecccCC
Q psy2674         159 KEYYKYRWVICSNIAE  174 (183)
Q Consensus       159 ~~~~~~~~~~~pe~~~  174 (183)
                      +...++..|+|||++.
T Consensus       175 ~~~~~~~~y~aPE~~~  190 (313)
T cd06633         175 NSFVGTPYWMAPEVIL  190 (313)
T ss_pred             CCccccccccChhhcc
Confidence            2455677899999974

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.93  E-value=2.4e-25  Score=168.82  Aligned_cols=156  Identities=21%  Similarity=0.323  Sum_probs=129.5

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-----ccEEEEeeCCCCC
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-----PHYLLLEYTDWGD   77 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~~~   77 (183)
                      .-..+.||++.+..++..||+|.+...........+.+|+.+++.++|+||+++++++...+     ..++++|+++ ++
T Consensus        15 ~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~   93 (336)
T cd07849          15 EGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELME-TD   93 (336)
T ss_pred             ecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhcc-cC
Confidence            34567899999999999999999874433444557788999999999999999998876533     4789999997 68


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+...                .+++..+..++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++....
T Consensus        94 l~~~~~~~----------------~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  157 (336)
T cd07849          94 LYKLIKTQ----------------HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD  157 (336)
T ss_pred             HHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence            87777432                48889999999999999999999999999999999999999999999999987543


Q ss_pred             cc--------cccceeeeeecccCCC
Q psy2674         158 QK--------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~~--------~~~~~~~~~~pe~~~~  175 (183)
                      ..        ...++.+|+|||.+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~  183 (336)
T cd07849         158 PEHDHTGFLTEYVATRWYRAPEIMLN  183 (336)
T ss_pred             ccccccCCcCCcCcCCCccChHHhhC
Confidence            21        2456788999998654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.93  E-value=1.4e-24  Score=161.37  Aligned_cols=160  Identities=21%  Similarity=0.312  Sum_probs=130.9

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC-----CccEEEEeeCCCC
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG-----DPHYLLLEYTDWG   76 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~   76 (183)
                      ....+.+|++....+++.+|+|.+......  ...+.+|+.+++.+ +|+|++++++++...     +..++++||++++
T Consensus        32 ~g~~~~vy~~~~~~~~~~~aik~~~~~~~~--~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~  109 (291)
T cd06639          32 KGTYGKVYKVTNKKDGSLAAVKILDPISDV--DEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGG  109 (291)
T ss_pred             cCCCeEEEEEEECCCCCEEEEEEecccccH--HHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCC
Confidence            345678999999999999999998644322  34677899999988 899999999998753     3589999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++.....           ....+++..++.++.|++.++.+||+.+++|+||+|+||+++.++.++++|||++...
T Consensus       110 sL~~~~~~~~~-----------~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~  178 (291)
T cd06639         110 SVTELVKGLLI-----------CGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQL  178 (291)
T ss_pred             cHHHHHHHhhh-----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhc
Confidence            99998864321           1125788999999999999999999999999999999999999999999999998754


Q ss_pred             Cc-----ccccceeeeeecccCCC
Q psy2674         157 YQ-----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       157 ~~-----~~~~~~~~~~~pe~~~~  175 (183)
                      ..     ....++..|+|||++.+
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~  202 (291)
T cd06639         179 TSTRLRRNTSVGTPFWMAPEVIAC  202 (291)
T ss_pred             ccccccccCccCCccccChhhhcC
Confidence            33     23456788999998753

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.93  E-value=7e-25  Score=159.36  Aligned_cols=162  Identities=20%  Similarity=0.287  Sum_probs=139.3

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|....+.+|++....++..+++|.+....  .......+.+|+++++.++|+|++++++.+.++...++++||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            356677889999998899999999987432  233456788999999999999999999999999999999999988999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++.....++.|++.++.++|+.+++|+||+|+||+++.++.++++|||++.....
T Consensus        81 ~~~l~~~~---------------~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~  145 (250)
T cd05123          81 FSHLSKEG---------------RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSS  145 (250)
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence            99987653               478999999999999999999999999999999999999999999999999876543


Q ss_pred             c-----cccceeeeeecccCCCcc
Q psy2674         159 K-----EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       159 ~-----~~~~~~~~~~pe~~~~~~  177 (183)
                      .     ...++..|++||...+..
T Consensus       146 ~~~~~~~~~~~~~~~~Pe~~~~~~  169 (250)
T cd05123         146 EGSRTNTFCGTPEYLAPEVLLGKG  169 (250)
T ss_pred             CCCcccCCcCCccccChHHhCCCC
Confidence            2     345577899999987654

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.93  E-value=7.4e-25  Score=162.81  Aligned_cols=159  Identities=17%  Similarity=0.229  Sum_probs=131.3

Q ss_pred             CCCCCceeeeccCC---CCcceEEEeeccCCC---CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDP---QDTSVLMAKSLVHSK---DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~---~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |--..+.+|.+.+.   .+|..+|+|.+....   .....+.+.+|+++++.+ +|++|+.+.+.+..+...++++||++
T Consensus         9 g~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~   88 (290)
T cd05613           9 GTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYIN   88 (290)
T ss_pred             ccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCC
Confidence            34456677777653   478999999986432   122345678899999999 69999999999998889999999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+++....               .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++.
T Consensus        89 ~~~L~~~l~~~~---------------~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~  153 (290)
T cd05613          89 GGELFTHLSQRE---------------RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK  153 (290)
T ss_pred             CCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccce
Confidence            999999987653               47888889999999999999999999999999999999999999999999987


Q ss_pred             CCCcc------cccceeeeeecccCCC
Q psy2674         155 DTYQK------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~------~~~~~~~~~~pe~~~~  175 (183)
                      .....      ...++..|+|||.+.+
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  180 (290)
T cd05613         154 EFHEDEVERAYSFCGTIEYMAPDIVRG  180 (290)
T ss_pred             ecccccccccccccCCcccCChhhccC
Confidence            55432      2346788999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.1e-24  Score=160.25  Aligned_cols=161  Identities=17%  Similarity=0.281  Sum_probs=133.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCC------ccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD------PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~------~~~lv~e~~~   74 (183)
                      |....+.+|.+.+..++..+++|++.....  ..+.+.+|+.+++.+ +|+||+++++.+....      ..++++||++
T Consensus        15 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~   92 (275)
T cd06608          15 GEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCG   92 (275)
T ss_pred             cCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCC
Confidence            455677899999988999999999874433  235788999999999 7999999999997644      3899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+.+.....           ....+++..+..++.|++.|+.+||+.+++|+||+|+||+++.++.++++|||++.
T Consensus        93 ~~~L~~~~~~~~~-----------~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~  161 (275)
T cd06608          93 GGSVTDLVKGLRK-----------KGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSA  161 (275)
T ss_pred             CCcHHHHHHHHhh-----------cCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccce
Confidence            9999998876431           01258889999999999999999999999999999999999999999999999987


Q ss_pred             CCCc-----ccccceeeeeecccCCC
Q psy2674         155 DTYQ-----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~-----~~~~~~~~~~~pe~~~~  175 (183)
                      ....     ....++..|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~~~~~y~aPE~~~~  187 (275)
T cd06608         162 QLDSTLGRRNTFIGTPYWMAPEVIAC  187 (275)
T ss_pred             ecccchhhhcCccccccccCHhHhcc
Confidence            5432     23456778999998754

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0196|consensus

Probab=99.93  E-value=1.4e-25  Score=177.76  Aligned_cols=156  Identities=23%  Similarity=0.341  Sum_probs=132.0

Q ss_pred             CceeeeccC---CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHH
Q psy2674           6 NARGLKASD---PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL   82 (183)
Q Consensus         6 ~~~~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   82 (183)
                      ++.|...+.   .+....||+|-++......++..|..|+.++.++.||||+++.|+.....+..|+.|||++|+|.+++
T Consensus       642 FGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFL  721 (996)
T KOG0196|consen  642 FGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFL  721 (996)
T ss_pred             ccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHH
Confidence            344444444   34557899999998888888889999999999999999999999999999999999999999999999


Q ss_pred             HhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc--
Q psy2674          83 LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--  160 (183)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~--  160 (183)
                      +....              .+...+...+.+.|+.|++||.+.++|||||.++|||++.+-.+|++|||+++...++.  
T Consensus       722 R~~DG--------------qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~  787 (996)
T KOG0196|consen  722 RQNDG--------------QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA  787 (996)
T ss_pred             hhcCC--------------ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCc
Confidence            88754              58888999999999999999999999999999999999999999999999998654432  


Q ss_pred             ccce------eeeeecccCCC
Q psy2674         161 YYKY------RWVICSNIAEG  175 (183)
Q Consensus       161 ~~~~------~~~~~pe~~~~  175 (183)
                      .+.|      -.|.|||.+.-
T Consensus       788 ~ytt~GGKIPiRWTAPEAIa~  808 (996)
T KOG0196|consen  788 AYTTLGGKIPIRWTAPEAIAY  808 (996)
T ss_pred             cccccCCccceeecChhHhhh
Confidence            2221      24567777643

>KOG4279|consensus

Probab=99.93  E-value=1.2e-25  Score=176.89  Aligned_cols=160  Identities=18%  Similarity=0.235  Sum_probs=137.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--..+.||-+++..+...+|+|.+....+. ..+.+.+||.+-+.++|.||+++.|.+...+.+-|+||-.+||+|.++
T Consensus       584 GKGTYG~VYA~RD~~tqvrIaIKEIpekdsr-~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsL  662 (1226)
T KOG4279|consen  584 GKGTYGTVYAARDMDTQVRIAIKEIPEKDSR-EVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSL  662 (1226)
T ss_pred             ecCceeEEEeeccccceeEEEeeecccccch-hhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHH
Confidence            3345678999999999999999999755443 345789999999999999999999999988889999999999999999


Q ss_pred             HHhh-ccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-cCCceEEecccCCCCC---
Q psy2674          82 LLAT-RKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSVKISLSGLSKDT---  156 (183)
Q Consensus        82 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-~~~~~ki~dfg~a~~~---  156 (183)
                      +... ++.             .-++.+.-.+..||++|+.|||++.|||||||-+|+|++ ..|.+||+|||.++..   
T Consensus       663 LrskWGPl-------------KDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi  729 (1226)
T KOG4279|consen  663 LRSKWGPL-------------KDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI  729 (1226)
T ss_pred             HHhccCCC-------------ccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC
Confidence            9764 321             127788889999999999999999999999999999996 7899999999998743   


Q ss_pred             --CcccccceeeeeecccCCC
Q psy2674         157 --YQKEYYKYRWVICSNIAEG  175 (183)
Q Consensus       157 --~~~~~~~~~~~~~pe~~~~  175 (183)
                        ....+.||..|||||+++-
T Consensus       730 nP~TETFTGTLQYMAPEvIDq  750 (1226)
T KOG4279|consen  730 NPCTETFTGTLQYMAPEVIDQ  750 (1226)
T ss_pred             CccccccccchhhhChHhhcc
Confidence              3346788999999999864

>KOG0984|consensus

Probab=99.93  E-value=2.7e-25  Score=152.18  Aligned_cols=161  Identities=18%  Similarity=0.200  Sum_probs=135.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-+.+.+-+.++..+|...|+|.+...-+.+..+++.+|+++.... .+|+++.++|....++..|+.||.++ .+|..
T Consensus        55 GrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSldk  133 (282)
T KOG0984|consen   55 GRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-TSLDK  133 (282)
T ss_pred             cCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-hhHHH
Confidence            44456667777899999999999998665566667889999987666 89999999999999999999999998 88988


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +....-+           ....++|...-.++..+.+|+.|||++ .++|||+||+|||++..|.+|++|||.+.....+
T Consensus       134 fy~~v~~-----------~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS  202 (282)
T KOG0984|consen  134 FYRKVLK-----------KGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS  202 (282)
T ss_pred             HHHHHHh-----------cCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence            8776533           113688899999999999999999987 8999999999999999999999999999855443


Q ss_pred             ----cccceeeeeecccCC
Q psy2674         160 ----EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~  174 (183)
                          -..|..-|+|||.+.
T Consensus       203 iAkt~daGCkpYmaPEri~  221 (282)
T KOG0984|consen  203 IAKTMDAGCKPYMAPERIN  221 (282)
T ss_pred             hHHHHhcCCCccCChhhcC
Confidence                244567899999875

>KOG3653|consensus

Probab=99.93  E-value=2e-25  Score=168.29  Aligned_cols=150  Identities=23%  Similarity=0.357  Sum_probs=127.6

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC--CCcceeeEEeEEecCC----ccEEEEeeCCCCC
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL--DHAHVVKMIGICRDGD----PHYLLLEYTDWGD   77 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~   77 (183)
                      -.+|.||++.  -+++.||||++..    +..+.++.|-+++...  +|+||+++++.-...+    .+++|++|.+.|+
T Consensus       221 Grfg~V~Kaq--L~~~~VAVKifp~----~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGs  294 (534)
T KOG3653|consen  221 GRFGCVWKAQ--LDNRLVAVKIFPE----QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGS  294 (534)
T ss_pred             Cccceeehhh--ccCceeEEEecCH----HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCc
Confidence            3467788664  4459999999873    3455788888888765  8999999998866544    7999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---------CCceecccccceeEeccCCceEEe
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD---------KRLIHKDIAARNCLISSDLSVKIS  148 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---------~~ivH~di~~~nil~~~~~~~ki~  148 (183)
                      |.++++..                .+++.....++..+..||+|||.         .+|+|||||..|||+.+++++-|+
T Consensus       295 L~dyL~~n----------------tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa  358 (534)
T KOG3653|consen  295 LCDYLKAN----------------TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA  358 (534)
T ss_pred             HHHHHHhc----------------cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence            99999887                58999999999999999999995         369999999999999999999999


Q ss_pred             cccCCCCCCcc-------cccceeeeeecccCCC
Q psy2674         149 LSGLSKDTYQK-------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       149 dfg~a~~~~~~-------~~~~~~~~~~pe~~~~  175 (183)
                      |||+|......       ...||..|||||++.|
T Consensus       359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEg  392 (534)
T KOG3653|consen  359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEG  392 (534)
T ss_pred             ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhh
Confidence            99999865542       3678999999999988

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.93  E-value=2.4e-24  Score=157.64  Aligned_cols=159  Identities=24%  Similarity=0.288  Sum_probs=129.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |...++.||++.. .+++.+|+|.+......  .+.+.+|+.+++.++|+|++++++++. ++..++++|++.+++|.++
T Consensus        15 g~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~   90 (260)
T cd05067          15 GAGQFGEVWMGYY-NGHTKVAIKSLKQGSMS--PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDF   90 (260)
T ss_pred             ccCccceEEeeec-CCCceEEEEEecCCCCc--HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHH
Confidence            5556778888874 46788999998744332  347889999999999999999999874 5678999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.++++||+.+++|+||+|+||+++.++.++++|||++....... 
T Consensus        91 ~~~~~~-------------~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05067          91 LKTPEG-------------IKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY  157 (260)
T ss_pred             HHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence            865422             257888999999999999999999999999999999999999999999999987554221 


Q ss_pred             -----ccceeeeeecccCCCcc
Q psy2674         161 -----YYKYRWVICSNIAEGRR  177 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~  177 (183)
                           ..++..|+|||++.+..
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~~  179 (260)
T cd05067         158 TAREGAKFPIKWTAPEAINYGT  179 (260)
T ss_pred             ccccCCcccccccCHHHhccCC
Confidence                 22345799999986544

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.93  E-value=2.9e-24  Score=156.72  Aligned_cols=158  Identities=23%  Similarity=0.306  Sum_probs=127.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |...++.+|.+.  .+++.+|+|.+.....   .+.+.+|+..++.++|+|++++.+.+... ..++++||+.+++|.++
T Consensus        15 g~g~~g~v~~~~--~~~~~~~iK~~~~~~~---~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~   88 (254)
T cd05083          15 GEGEFGAVLQGE--YTGQKVAVKNIKCDVT---AQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNF   88 (254)
T ss_pred             ccCCCCceEecc--cCCCceEEEeecCcch---HHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHH
Confidence            445566777654  5788899999864322   34688999999999999999999998764 57999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....             ..+++..++.++.|++.++.+||++|++|+||+|+||+++.++.++|+|||++......  
T Consensus        89 l~~~~~-------------~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~  155 (254)
T cd05083          89 LRTRGR-------------ALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVD  155 (254)
T ss_pred             HHhcCc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCC
Confidence            976532             24788899999999999999999999999999999999999999999999998754322  


Q ss_pred             cccceeeeeecccCCCccc
Q psy2674         160 EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....+..|+|||.+.+..+
T Consensus       156 ~~~~~~~y~~pe~~~~~~~  174 (254)
T cd05083         156 NSKLPVKWTAPEALKHKKF  174 (254)
T ss_pred             CCCCCceecCHHHhccCCc
Confidence            2223467999999876554

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.93  E-value=7.7e-25  Score=162.96  Aligned_cols=163  Identities=22%  Similarity=0.320  Sum_probs=131.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCc-----cEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDP-----HYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~-----~~lv~e~~~   74 (183)
                      |.-..+.+|++.+..+++.||+|.+..... ......+.+|+.+++.+ +|+|++++++.+...+.     .++++||++
T Consensus        10 g~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~   89 (295)
T cd07837          10 GEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLD   89 (295)
T ss_pred             cccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccC
Confidence            445668899999999999999999763322 22234678899999999 57999999999887655     799999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLS  153 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a  153 (183)
                       ++|.+++......          ....+++..++.++.|++.||.|||+++++|+||+|+||+++. ++.++++|||++
T Consensus        90 -~~l~~~~~~~~~~----------~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~  158 (295)
T cd07837          90 -SDLKKFMDSNGRG----------PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG  158 (295)
T ss_pred             -cCHHHHHHHhccc----------CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence             5898888654321          0124789999999999999999999999999999999999998 899999999998


Q ss_pred             CCCCcc-----cccceeeeeecccCCC
Q psy2674         154 KDTYQK-----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       154 ~~~~~~-----~~~~~~~~~~pe~~~~  175 (183)
                      ......     ...++++|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~aPE~~~~  185 (295)
T cd07837         159 RAFSIPVKSYTHEIVTLWYRAPEVLLG  185 (295)
T ss_pred             eecCCCccccCCcccccCCCChHHhhC
Confidence            754321     2245778999998754

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.93  E-value=7.4e-25  Score=159.66  Aligned_cols=167  Identities=17%  Similarity=0.293  Sum_probs=139.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++.+..++..+++|.+... ........+.+|++.++.++|+||+++.+.+.+....++++||+++++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~   88 (256)
T cd08530           9 GKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSK   88 (256)
T ss_pred             cCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHH
Confidence            3445678999988899999999998743 244455678899999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++.....           ....+++..++.++.+++.|+.+||+.+++|+||+|.||+++.++.++++|||++...... 
T Consensus        89 ~~~~~~~-----------~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~  157 (256)
T cd08530          89 AISKRKK-----------KRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM  157 (256)
T ss_pred             HHHHHHh-----------hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence            8876422           1125788899999999999999999999999999999999999999999999998755432 


Q ss_pred             --cccceeeeeecccCCCcccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ...++..|+|||.+.+..++
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~~~  179 (256)
T cd08530         158 AKTQIGTPHYMAPEVWKGRPYS  179 (256)
T ss_pred             cccccCCccccCHHHHCCCCCC
Confidence              34467789999998876553

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.93  E-value=8.6e-25  Score=165.66  Aligned_cols=159  Identities=19%  Similarity=0.240  Sum_probs=132.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHH-------------HHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDE-------------ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL   68 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   68 (183)
                      |.-..+.+|++.+..+++.||+|.+.......             ....+.+|+++++.++|+||+++.+++..++..++
T Consensus        18 g~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   97 (335)
T PTZ00024         18 GEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINL   97 (335)
T ss_pred             cCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCCcEEE
Confidence            45567889999999999999999986332211             01246789999999999999999999999999999


Q ss_pred             EEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEe
Q psy2674          69 LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS  148 (183)
Q Consensus        69 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~  148 (183)
                      ++|+++ ++|.+.+....               .+++.....++.|++.++++||+.+++|+||+|+||+++.++.++++
T Consensus        98 v~e~~~-~~l~~~l~~~~---------------~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~  161 (335)
T PTZ00024         98 VMDIMA-SDLKKVVDRKI---------------RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIA  161 (335)
T ss_pred             EEeccc-cCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEEC
Confidence            999998 79998886543               48889999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCc-------------------ccccceeeeeecccCCCc
Q psy2674         149 LSGLSKDTYQ-------------------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       149 dfg~a~~~~~-------------------~~~~~~~~~~~pe~~~~~  176 (183)
                      |||++.....                   ....++.+|+|||.+.+.
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  208 (335)
T PTZ00024        162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA  208 (335)
T ss_pred             CccceeecccccccccccccccccccccccccccccCCCCChhcccC
Confidence            9999875441                   112346789999998764

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.93  E-value=6.1e-25  Score=162.38  Aligned_cols=160  Identities=23%  Similarity=0.363  Sum_probs=136.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |....+.+|++....++..+++|.+.... .+.....+.+|++.++.++|++|+++++++.+++..++++||++ ++|.+
T Consensus         8 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~   86 (283)
T cd05118           8 GEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-TDLYK   86 (283)
T ss_pred             ecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC-CCHHH
Confidence            34456789999999999999999987433 32345578899999999999999999999999999999999998 58888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+.....              .+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++|+|||.+...... 
T Consensus        87 ~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~  152 (283)
T cd05118          87 LIKDRQR--------------GLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV  152 (283)
T ss_pred             HHHhhcc--------------cCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence            8866432              5889999999999999999999999999999999999999999999999998755443 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ...++.+|+|||.+.+.
T Consensus       153 ~~~~~~~~~~~~~~PE~~~~~  173 (283)
T cd05118         153 RPYTHYVVTRWYRAPELLLGD  173 (283)
T ss_pred             ccccCccCcccccCcHHHhcC
Confidence                24567889999998765

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.93  E-value=8.7e-25  Score=159.47  Aligned_cols=164  Identities=21%  Similarity=0.345  Sum_probs=135.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-..+.+|++....++..+++|.+.... .....+.+.+|+++++.++|+|++++++.+.+++..++++||+++++|.+
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   88 (257)
T cd08225           9 GEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMK   88 (257)
T ss_pred             cCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHH
Confidence            33456789999999999999999987432 22334577899999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-ceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-~~ki~dfg~a~~~~~~  159 (183)
                      .+.....             ..+++..++.++.+++.++.+||+++++|+|++|+||+++.++ .++++|||.+......
T Consensus        89 ~~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~  155 (257)
T cd08225          89 RINRQRG-------------VLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS  155 (257)
T ss_pred             HHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence            8876432             2478899999999999999999999999999999999998775 5699999998755433


Q ss_pred             -----cccceeeeeecccCCCccc
Q psy2674         160 -----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~~~  178 (183)
                           ...++..|+|||+..+..+
T Consensus       156 ~~~~~~~~~~~~~~ape~~~~~~~  179 (257)
T cd08225         156 MELAYTCVGTPYYLSPEICQNRPY  179 (257)
T ss_pred             cccccccCCCccccCHHHHcCCCC
Confidence                 2345778999998866543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0587|consensus

Probab=99.92  E-value=9.5e-25  Score=174.63  Aligned_cols=157  Identities=19%  Similarity=0.346  Sum_probs=138.2

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEe-----cCCccEEEEeeCCCCC
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICR-----DGDPHYLLLEYTDWGD   77 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~   77 (183)
                      -..++||++.+..+++.+|+|++....+.+  +.+..|.++++.. .|||++.+++++.     .++.+|||||+|.+|+
T Consensus        30 Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d--eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGS  107 (953)
T KOG0587|consen   30 GTYGKVYKGRHVKTGQLAAIKIMDPTEDEE--EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGS  107 (953)
T ss_pred             ccceeEEEEeeeecCceeeeEeecCCcccc--HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeeccCCcc
Confidence            457889999999999999999988544433  3678899999988 8999999999985     3678999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      ..++++....             ..+.|+.+..+++.++.|+.+||++.++|||||-.|||++.++.+|++|||.+....
T Consensus       108 VTDLVKn~~g-------------~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQld  174 (953)
T KOG0587|consen  108 VTDLVKNTKG-------------NRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD  174 (953)
T ss_pred             HHHHHhhhcc-------------cchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeee
Confidence            9999988753             368999999999999999999999999999999999999999999999999988655


Q ss_pred             c-----ccccceeeeeecccCCC
Q psy2674         158 Q-----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~-----~~~~~~~~~~~pe~~~~  175 (183)
                      +     +...||+.|||||++..
T Consensus       175 sT~grRnT~iGtP~WMAPEViac  197 (953)
T KOG0587|consen  175 STVGRRNTFIGTPYWMAPEVIAC  197 (953)
T ss_pred             cccccccCcCCCcccccceeeec
Confidence            4     46788999999999854

>KOG0669|consensus

Probab=99.92  E-value=3.3e-27  Score=166.09  Aligned_cols=156  Identities=24%  Similarity=0.332  Sum_probs=128.1

Q ss_pred             CCCceeeeccCCCCcceEEEeeccC--CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--------CCccEEEEeeC
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVH--SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--------GDPHYLLLEYT   73 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~~   73 (183)
                      -.++.||+|++..+++.||+|++-.  .+.. ......+|+.++..++|+|++.+++.|..        ..++|+||++|
T Consensus        28 GtfgeVFkAr~~n~~kkvalkkvlmeneKeG-fpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~c  106 (376)
T KOG0669|consen   28 GTFGEVFKARSKNTGKKVALKKVLMENEKEG-FPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFC  106 (376)
T ss_pred             chHHHHHHHhhcCccchhHHHHHHHhccccC-CcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHh
Confidence            3456799999999999999988652  2211 12256789999999999999999888743        34589999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      + .+|.-+++...-              .++...+..++.+++.|+.|+|.+-|+|||+||.|+||+.++.++|+|||++
T Consensus       107 e-hDLaGlLsn~~v--------------r~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGla  171 (376)
T KOG0669|consen  107 E-HDLAGLLSNRKV--------------RFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLA  171 (376)
T ss_pred             h-hhHHHHhcCccc--------------cccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence            8 888888876532              5888899999999999999999999999999999999999999999999999


Q ss_pred             CCCCcc------c---ccceeeeeecccCCC
Q psy2674         154 KDTYQK------E---YYKYRWVICSNIAEG  175 (183)
Q Consensus       154 ~~~~~~------~---~~~~~~~~~pe~~~~  175 (183)
                      +.....      +   ...|.||+|||.+.|
T Consensus       172 r~fs~~~n~~kprytnrvvTLwYrppEllLG  202 (376)
T KOG0669|consen  172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLG  202 (376)
T ss_pred             cceecccccCCCCcccceeeeecCCHHHhhc
Confidence            744321      2   234899999999987

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.92  E-value=8.7e-25  Score=161.77  Aligned_cols=160  Identities=21%  Similarity=0.332  Sum_probs=133.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |....+.+|++.+..++..|++|.+..... ......+.+|++.++.++|+|++++++++.+++..++++||++ ++|.+
T Consensus         8 ~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~   86 (283)
T cd07835           8 GEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKK   86 (283)
T ss_pred             cCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHH
Confidence            445677899999999999999999874322 2223467889999999999999999999999999999999996 78999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++.....             ..+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++++|||++...... 
T Consensus        87 ~~~~~~~-------------~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~  153 (283)
T cd07835          87 YMDSSPL-------------TGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV  153 (283)
T ss_pred             HHhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence            8876531             24889999999999999999999999999999999999999999999999998754321 


Q ss_pred             ----cccceeeeeecccCCC
Q psy2674         160 ----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~  175 (183)
                          ...++..|+|||++.+
T Consensus       154 ~~~~~~~~~~~~~aPE~~~~  173 (283)
T cd07835         154 RTYTHEVVTLWYRAPEILLG  173 (283)
T ss_pred             cccCccccccCCCCCceeec
Confidence                2234678999998755

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.92  E-value=1.1e-24  Score=162.59  Aligned_cols=159  Identities=23%  Similarity=0.299  Sum_probs=129.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC----------ccEEEE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD----------PHYLLL   70 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----------~~~lv~   70 (183)
                      |--..+.||++....+++.|++|.+.... .......+.+|+++++.++|||++++++++.+..          ..++++
T Consensus        16 g~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~   95 (302)
T cd07864          16 GEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVF   95 (302)
T ss_pred             cccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEE
Confidence            34457789999999999999999987432 2222336778999999999999999999987654          789999


Q ss_pred             eeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecc
Q psy2674          71 EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS  150 (183)
Q Consensus        71 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~df  150 (183)
                      ||++ +++...+....              ..+++..++.++.|++.|+.|||+++++|+||+|+||+++.++.++|+||
T Consensus        96 e~~~-~~l~~~l~~~~--------------~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~df  160 (302)
T cd07864          96 EYMD-HDLMGLLESGL--------------VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADF  160 (302)
T ss_pred             cccC-ccHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcc
Confidence            9998 57777765432              15889999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCccc------ccceeeeeecccCCC
Q psy2674         151 GLSKDTYQKE------YYKYRWVICSNIAEG  175 (183)
Q Consensus       151 g~a~~~~~~~------~~~~~~~~~pe~~~~  175 (183)
                      |++.......      ...+..|+|||++.+
T Consensus       161 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  191 (302)
T cd07864         161 GLARLYNSEESRPYTNKVITLWYRPPELLLG  191 (302)
T ss_pred             cccccccCCcccccccceeccCccChHHhcC
Confidence            9998654322      234667999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.92  E-value=1.1e-24  Score=161.23  Aligned_cols=159  Identities=23%  Similarity=0.309  Sum_probs=133.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   78 (183)
                      |....+.+|++....++..+++|.+.... .......+.+|+++++.++|+|++++.+++.+.  +..++++||++ ++|
T Consensus         8 ~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~-~~l   86 (287)
T cd07840           8 GEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD-HDL   86 (287)
T ss_pred             ccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc-ccH
Confidence            44567889999999999999999998543 223334678899999999999999999999887  78999999998 688


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.+....              ..+++..++.++.|++.|+.+||+.+++|+||+|+||++++++.++++|||++.....
T Consensus        87 ~~~~~~~~--------------~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~  152 (287)
T cd07840          87 TGLLDSPE--------------VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTK  152 (287)
T ss_pred             HHHHhccC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence            88876542              1588999999999999999999999999999999999999999999999999885543


Q ss_pred             c------cccceeeeeecccCCC
Q psy2674         159 K------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~------~~~~~~~~~~pe~~~~  175 (183)
                      .      ...++.+|+|||.+.+
T Consensus       153 ~~~~~~~~~~~~~~y~~PE~~~~  175 (287)
T cd07840         153 RNSADYTNRVITLWYRPPELLLG  175 (287)
T ss_pred             CCcccccccccccccCCceeeEc
Confidence            3      2344678999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.92  E-value=3.4e-25  Score=167.85  Aligned_cols=158  Identities=19%  Similarity=0.322  Sum_probs=130.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEec----CCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRD----GDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~   76 (183)
                      |....+.+|++.+..++..||+|.+.... .......+.+|+.+++.++|+||+++.+++..    ....++++||+. +
T Consensus        14 g~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~   92 (334)
T cd07855          14 GSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-S   92 (334)
T ss_pred             ecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-h
Confidence            34456789999999999999999987432 22334567889999999999999999988763    346789999997 7


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+.+....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++...
T Consensus        93 ~l~~~~~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~  157 (334)
T cd07855          93 DLHHIIHSDQ---------------PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGL  157 (334)
T ss_pred             hHHHHhccCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence            8888876442               4889999999999999999999999999999999999999999999999998744


Q ss_pred             Cc---------ccccceeeeeecccCCC
Q psy2674         157 YQ---------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       157 ~~---------~~~~~~~~~~~pe~~~~  175 (183)
                      ..         ....++.+|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (334)
T cd07855         158 SSSPTEHKYFMTEYVATRWYRAPELLLS  185 (334)
T ss_pred             cccCcCCCcccccccccccccChHHhcC
Confidence            32         12356889999998754

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG2052|consensus

Probab=99.92  E-value=2.9e-25  Score=166.35  Aligned_cols=149  Identities=15%  Similarity=0.289  Sum_probs=125.9

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC--CCcceeeEEeEEecCC----ccEEEEeeCCCCCH
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL--DHAHVVKMIGICRDGD----PHYLLLEYTDWGDL   78 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~L   78 (183)
                      -++.|+  +..-.|+.||||++....+.    .+.+|.++++.+  +|+||+.++++-..++    .+|++++|.+.|||
T Consensus       223 RyGEVw--rG~wrGe~VAVKiF~srdE~----SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL  296 (513)
T KOG2052|consen  223 RFGEVW--RGRWRGEDVAVKIFSSRDER----SWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSL  296 (513)
T ss_pred             ccccee--eccccCCceEEEEecccchh----hhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCCcH
Confidence            355666  33567999999999755443    678888888775  9999999998865432    48999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CceecccccceeEeccCCceEEecc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--------RLIHKDIAARNCLISSDLSVKISLS  150 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~ivH~di~~~nil~~~~~~~ki~df  150 (183)
                      .+++.+.                .++....+.++..+++||.+||..        .|.|||||..|||+..++.+-|+|+
T Consensus       297 ~DyL~r~----------------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL  360 (513)
T KOG2052|consen  297 YDYLNRN----------------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  360 (513)
T ss_pred             HHHHhhc----------------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence            9999885                589999999999999999999952        5899999999999999999999999


Q ss_pred             cCCCC---------CCcccccceeeeeecccCCC
Q psy2674         151 GLSKD---------TYQKEYYKYRWVICSNIAEG  175 (183)
Q Consensus       151 g~a~~---------~~~~~~~~~~~~~~pe~~~~  175 (183)
                      |+|..         +..+..+||..|||||+++.
T Consensus       361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLde  394 (513)
T KOG2052|consen  361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDE  394 (513)
T ss_pred             eeeEEecccCCcccCCCCCccceeeccChHHhhh
Confidence            99973         33467899999999999865

>KOG0664|consensus

Probab=99.92  E-value=5.8e-27  Score=166.79  Aligned_cols=158  Identities=20%  Similarity=0.344  Sum_probs=132.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-----ccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-----PHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~   75 (183)
                      |--+++.|+..++..+|+.|++|++.+ ..+-...+++.+|+.++..++|.|++...+...-..     ++|+++|.+. 
T Consensus        62 GYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-  140 (449)
T KOG0664|consen   62 GYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-  140 (449)
T ss_pred             cccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-
Confidence            566788899999999999999999873 234445678999999999999999999988876443     3677888776 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      .+|...+-..               ..++..-+.-+.+||+.|+.|||+.+|.||||||.|.|++.+-..||+|||+|+.
T Consensus       141 SDLHKIIVSP---------------Q~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARv  205 (449)
T KOG0664|consen  141 SDLHKIIVSP---------------QALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLART  205 (449)
T ss_pred             hhhhheeccC---------------CCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccc
Confidence            7787766443               2577888888999999999999999999999999999999999999999999996


Q ss_pred             CCccc------ccceeeeeecccCCC
Q psy2674         156 TYQKE------YYKYRWVICSNIAEG  175 (183)
Q Consensus       156 ~~~~~------~~~~~~~~~pe~~~~  175 (183)
                      ...++      ...|.+|++||++.|
T Consensus       206 ee~d~~~hMTqEVVTQYYRAPEiLMG  231 (449)
T KOG0664|consen  206 WDQRDRLNMTHEVVTQYYRAPELLMG  231 (449)
T ss_pred             cchhhhhhhHHHHHHHHhccHHHhhc
Confidence            65543      344889999999988

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.92  E-value=3.9e-24  Score=156.10  Aligned_cols=160  Identities=21%  Similarity=0.321  Sum_probs=130.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.+|++... ++..+++|.+......  ...+.+|+++++.++|++++++++++......++++||+++++|.++
T Consensus        13 g~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~--~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   89 (256)
T cd05112          13 GSGQFGLVWLGYWL-EKRKVAIKTIREGAMS--EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDY   89 (256)
T ss_pred             cCcccceEEEEEEe-CCCeEEEEECCCCCCC--HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHH
Confidence            34456778887664 4678999988743322  23688899999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....              .+++..++.++.+++.++.+||+.+++|+||+|+||+++.++.++|+|||++....... 
T Consensus        90 ~~~~~~--------------~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~  155 (256)
T cd05112          90 LRAQRG--------------KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY  155 (256)
T ss_pred             HHhCcc--------------CCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcc
Confidence            865432              47888999999999999999999999999999999999999999999999987543321 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ...+..|+|||.+.+..+
T Consensus       156 ~~~~~~~~~~~~~aPe~~~~~~~  178 (256)
T cd05112         156 TSSTGTKFPVKWSSPEVFSFSKY  178 (256)
T ss_pred             cccCCCccchhhcCHhHhccCCc
Confidence                 122457999999876543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.92  E-value=4.1e-24  Score=155.61  Aligned_cols=160  Identities=24%  Similarity=0.316  Sum_probs=138.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   78 (183)
                      |....+.+|++.+..++..+++|++.... .....+.+.+|++.++.++|+||+++++.+.+.  +..++++|++++++|
T Consensus         9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L   88 (260)
T cd06606           9 GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSL   88 (260)
T ss_pred             eecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcH
Confidence            34567889999999999999999987433 244566889999999999999999999999988  789999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.+++.++.+||+.+++|+|++|+||+++.++.++|+|||.+.....
T Consensus        89 ~~~~~~~~---------------~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~  153 (260)
T cd06606          89 SSLLKKFG---------------KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGD  153 (260)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence            99987653               488999999999999999999999999999999999999999999999999875544


Q ss_pred             c-------cccceeeeeecccCCCc
Q psy2674         159 K-------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ~-------~~~~~~~~~~pe~~~~~  176 (183)
                      .       ...++..|.|||...+.
T Consensus       154 ~~~~~~~~~~~~~~~y~~pE~~~~~  178 (260)
T cd06606         154 IETGEGTGSVRGTPYWMAPEVIRGE  178 (260)
T ss_pred             ccccccccCCCCCccccCHhhhcCC
Confidence            3       23457789999998664

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.92  E-value=3.1e-24  Score=158.83  Aligned_cols=158  Identities=18%  Similarity=0.311  Sum_probs=131.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEec------CCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRD------GDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~------~~~~~lv~e~~~   74 (183)
                      |.-.++.+|++.+..+++.+|+|++....  .....+..|+.+++.+ +|+|++++++++..      .+..+++|||++
T Consensus        25 g~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~  102 (282)
T cd06636          25 GNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCG  102 (282)
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCC
Confidence            45567889999999999999999986432  2334678899999988 79999999999853      356899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+++.....             ..+++..++.++.|++.++.|||+.+++|+|++|+||+++.++.++|+|||++.
T Consensus       103 ~~~L~~~~~~~~~-------------~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~  169 (282)
T cd06636         103 AGSVTDLVKNTKG-------------NALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  169 (282)
T ss_pred             CCcHHHHHHHccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence            9999999876432             247788899999999999999999999999999999999999999999999987


Q ss_pred             CCCc-----ccccceeeeeecccCC
Q psy2674         155 DTYQ-----KEYYKYRWVICSNIAE  174 (183)
Q Consensus       155 ~~~~-----~~~~~~~~~~~pe~~~  174 (183)
                      ....     ....++..|+|||++.
T Consensus       170 ~~~~~~~~~~~~~~~~~y~aPE~l~  194 (282)
T cd06636         170 QLDRTVGRRNTFIGTPYWMAPEVIA  194 (282)
T ss_pred             hhhccccCCCcccccccccCHhhcC
Confidence            5432     2345678899999975

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.92  E-value=5.7e-24  Score=155.73  Aligned_cols=160  Identities=24%  Similarity=0.242  Sum_probs=127.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++..... ..+++|.+.....  ..+.+.+|+.+++.++|+|++++++++. .+..+++|||+.+++|.++
T Consensus        15 g~g~~~~v~~~~~~~~-~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~   90 (260)
T cd05069          15 GQGCFGEVWMGTWNGT-TKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDF   90 (260)
T ss_pred             cCcCCCeEEEEEEcCC-ceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHH
Confidence            4456678888876554 4689998764332  2346888999999999999999998875 4678999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..+..++.|++.|+.|||+.+++|+||+|+||+++.++.++|+|||++....... 
T Consensus        91 ~~~~~~-------------~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~  157 (260)
T cd05069          91 LKEGDG-------------KYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY  157 (260)
T ss_pred             HhhCCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence            865421             247888899999999999999999999999999999999999999999999997543321 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||...+..+
T Consensus       158 ~~~~~~~~~~~y~~Pe~~~~~~~  180 (260)
T cd05069         158 TARQGAKFPIKWTAPEAALYGRF  180 (260)
T ss_pred             cccCCCccchhhCCHHHhccCCc
Confidence                 223456999998876543

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0614|consensus

Probab=99.92  E-value=1e-26  Score=176.93  Aligned_cols=163  Identities=17%  Similarity=0.143  Sum_probs=143.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|.-+++||=.....+....+|+|++++.  -+..+.+.+..|-+++..+.+|.|++++..|.++..+|++||-|-||.|
T Consensus       428 LGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGEl  507 (732)
T KOG0614|consen  428 LGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGEL  507 (732)
T ss_pred             cccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCchh
Confidence            46778888876666666667899998744  2455566889999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...++..+               .+++.++..++..+++|.+|||++|||.||+||.|++++.+|.+|+.|||+|+.+..
T Consensus       508 WTiLrdRg---------------~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~  572 (732)
T KOG0614|consen  508 WTILRDRG---------------SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS  572 (732)
T ss_pred             hhhhhhcC---------------CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence            99998876               489999999999999999999999999999999999999999999999999997766


Q ss_pred             c----cccceeeeeecccCCCccc
Q psy2674         159 K----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      +    .++||+-|.|||++.++.-
T Consensus       573 g~KTwTFcGTpEYVAPEIILnKGH  596 (732)
T KOG0614|consen  573 GRKTWTFCGTPEYVAPEIILNKGH  596 (732)
T ss_pred             CCceeeecCCcccccchhhhccCc
Confidence            4    5899999999999877544

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=9.5e-25  Score=173.37  Aligned_cols=134  Identities=22%  Similarity=0.268  Sum_probs=110.9

Q ss_pred             HHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHH
Q psy2674          34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAY  113 (183)
Q Consensus        34 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  113 (183)
                      ....+.+|+++++.++|+||+++++++.+++..+++++++. ++|.+++......          .........++.++.
T Consensus       206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~----------~~~~~~~~~~~~i~~  274 (501)
T PHA03210        206 AAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFD----------WKDRPLLKQTRAIMK  274 (501)
T ss_pred             HHHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEeccc-cCHHHHHhhcccc----------ccccccHHHHHHHHH
Confidence            44578899999999999999999999999999999999987 7787776543210          001233566778999


Q ss_pred             HHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc------cccceeeeeecccCCCccc
Q psy2674         114 QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       114 ~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~------~~~~~~~~~~pe~~~~~~~  178 (183)
                      |++.||.|||+++|+||||||+|||++.++.+||+|||++......      ...++..|+|||++.+..|
T Consensus       275 ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  345 (501)
T PHA03210        275 QLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGY  345 (501)
T ss_pred             HHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCC
Confidence            9999999999999999999999999999999999999999754332      3567899999999988766

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.92  E-value=3.3e-24  Score=162.21  Aligned_cols=157  Identities=20%  Similarity=0.271  Sum_probs=130.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec-CCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRD-GDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~   79 (183)
                      |....+.+|++.+..++..+|+|.+... ......+.+.+|+++++.++|||++++.+++.. ....++++|+++ ++|.
T Consensus        19 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~   97 (328)
T cd07856          19 GMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLH   97 (328)
T ss_pred             cccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHH
Confidence            4556788999999999999999987532 223334577899999999999999999999876 457889999985 7888


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+...                .+++.....++.|++.|+.+||+++++|+||+|+||+++.++.++++|||.+......
T Consensus        98 ~~~~~~----------------~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~  161 (328)
T cd07856          98 RLLTSR----------------PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ  161 (328)
T ss_pred             HHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC
Confidence            877532                4777888889999999999999999999999999999999999999999998754332


Q ss_pred             --cccceeeeeecccCCC
Q psy2674         160 --EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~  175 (183)
                        ...++..|+|||.+.+
T Consensus       162 ~~~~~~~~~y~aPE~~~~  179 (328)
T cd07856         162 MTGYVSTRYYRAPEIMLT  179 (328)
T ss_pred             cCCCcccccccCceeeec
Confidence              3456778999998755

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=1e-24  Score=161.33  Aligned_cols=160  Identities=24%  Similarity=0.357  Sum_probs=134.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |....+.||++....+++.+++|.+.............+|+..++.++ |+|++++++.+.+++..++++||+ +++|.+
T Consensus         8 g~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~   86 (283)
T cd07830           8 GDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQ   86 (283)
T ss_pred             ccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHH
Confidence            445678899999999999999999874433223334567999999998 999999999999999999999999 589998


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      .+.....             ..+++..+..++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++.....  
T Consensus        87 ~~~~~~~-------------~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~  153 (283)
T cd07830          87 LMKDRKG-------------KPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP  153 (283)
T ss_pred             HHHhccc-------------ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence            8876531             2478999999999999999999999999999999999999999999999999875544  


Q ss_pred             --ccccceeeeeecccCCC
Q psy2674         159 --KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~  175 (183)
                        ....++..|+|||++.+
T Consensus       154 ~~~~~~~~~~~~aPE~~~~  172 (283)
T cd07830         154 PYTDYVSTRWYRAPEILLR  172 (283)
T ss_pred             CcCCCCCcccccCceeeec
Confidence              23456788999998743

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.92  E-value=6.2e-25  Score=166.02  Aligned_cols=159  Identities=22%  Similarity=0.338  Sum_probs=134.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-----ccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-----PHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~~   75 (183)
                      |.-..+.+|++.+..++..+++|.+.... .....+.+.+|+..++.++|+||+++.+++....     ..++++||++ 
T Consensus         9 g~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-   87 (330)
T cd07834           9 GSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELME-   87 (330)
T ss_pred             cCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchh-
Confidence            44566789999998999999999987543 2344557889999999999999999999988765     7899999998 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+....               .+++..++.++.+++.++.+||++|++|+||+|.||+++.++.++++|||++..
T Consensus        88 ~~l~~~l~~~~---------------~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~  152 (330)
T cd07834          88 TDLHKVIKSPQ---------------PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARG  152 (330)
T ss_pred             hhHHHHHhCCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence            68888876542               488999999999999999999999999999999999999999999999999885


Q ss_pred             CCcc--------cccceeeeeecccCCCc
Q psy2674         156 TYQK--------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       156 ~~~~--------~~~~~~~~~~pe~~~~~  176 (183)
                      ....        ...++.+|+|||.+.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (330)
T cd07834         153 VDPDEDEKGFLTEYVVTRWYRAPELLLSS  181 (330)
T ss_pred             ecccccccccccccccccCcCCceeeecc
Confidence            4432        34568899999998776

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.92  E-value=1.1e-24  Score=160.78  Aligned_cols=161  Identities=20%  Similarity=0.292  Sum_probs=136.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |....+.+|++....++..+++|++...  ......+.+.+|.++++.++ |+||+++++.+.+++..+++||++++++|
T Consensus        10 g~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   89 (280)
T cd05581          10 GEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGEL   89 (280)
T ss_pred             cCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcH
Confidence            4566788999999999999999998742  22334457889999999997 99999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.+...+               .+++..++.++.|++.++.+||+.+++|+|++|+||+++.++.++++|||++.....
T Consensus        90 ~~~l~~~~---------------~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~  154 (280)
T cd05581          90 LQYIRKYG---------------SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP  154 (280)
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence            99997653               489999999999999999999999999999999999999999999999999875433


Q ss_pred             cc-------------------------ccceeeeeecccCCCcc
Q psy2674         159 KE-------------------------YYKYRWVICSNIAEGRR  177 (183)
Q Consensus       159 ~~-------------------------~~~~~~~~~pe~~~~~~  177 (183)
                      ..                         ..++..|+|||...+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~  198 (280)
T cd05581         155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP  198 (280)
T ss_pred             ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCC
Confidence            21                         23467899999876543

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.92  E-value=2.6e-24  Score=163.18  Aligned_cols=157  Identities=26%  Similarity=0.399  Sum_probs=129.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC--CccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG--DPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~   77 (183)
                      |....+.+|++.+..++..+++|.+.. .........+.+|+.+++.+ +|+||+++++++...  ...++++||++ ++
T Consensus        16 g~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~-~~   94 (337)
T cd07852          16 GKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYME-TD   94 (337)
T ss_pred             cCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEecccc-cC
Confidence            445667899999888999999998853 22333445677899999999 999999999998653  35799999998 68


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+...                .+.+...+.++.|++.|+.+||+.|++|+||+|+||+++.++.++|+|||++....
T Consensus        95 L~~~~~~~----------------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~  158 (337)
T cd07852          95 LHAVIRAN----------------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS  158 (337)
T ss_pred             HHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence            98887543                36788888899999999999999999999999999999999999999999987443


Q ss_pred             cc----------cccceeeeeecccCCC
Q psy2674         158 QK----------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~~----------~~~~~~~~~~pe~~~~  175 (183)
                      ..          .+.++.+|+|||.+.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~  186 (337)
T cd07852         159 ELEENPENPVLTDYVATRWYRAPEILLG  186 (337)
T ss_pred             cccccccCcchhcccccccccCceeeec
Confidence            21          2456889999998754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.92  E-value=2.6e-24  Score=159.65  Aligned_cols=164  Identities=13%  Similarity=0.165  Sum_probs=132.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--.++.||++.+..++..+|+|.+...........+.+|+..+..+. |+||+++++++.+++..++++|+++ .++.+
T Consensus        13 g~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~l~~   91 (288)
T cd06616          13 GRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-ISLDK   91 (288)
T ss_pred             CCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CCHHH
Confidence            445567899999999999999999875544455667889999999995 9999999999999889999999987 67666


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.......          ....+++..+..++.+++.|+.|||+. +++|+||+|+||+++.++.++|+|||++......
T Consensus        92 l~~~~~~~----------~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd06616          92 FYKYVYEV----------LKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS  161 (288)
T ss_pred             HHHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence            54321100          012588999999999999999999975 9999999999999999999999999998744322


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ...++..|+|||++.+.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~  182 (288)
T cd06616         162 IAKTRDAGCRPYMAPERIDPS  182 (288)
T ss_pred             CccccccCccCccCHHHhccc
Confidence                23567789999998765

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.92  E-value=4.2e-24  Score=160.21  Aligned_cols=158  Identities=18%  Similarity=0.266  Sum_probs=133.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC--CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH--SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-..+.+|++.+..++..+++|.+..  ........++.+|+++++.++|+|++++.+++..+...++++||+. +++.
T Consensus        24 g~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l~  102 (308)
T cd06634          24 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSAS  102 (308)
T ss_pred             eeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-CCHH
Confidence            344567899999989999999999863  2333444578899999999999999999999999999999999997 6887


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+.....              .+++..+..++.+++.++.+||+.+++|+||+|+||+++.++.++++|||++......
T Consensus       103 ~~~~~~~~--------------~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~  168 (308)
T cd06634         103 DLLEVHKK--------------PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  168 (308)
T ss_pred             HHHHHcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence            77754332              4788999999999999999999999999999999999999999999999998755443


Q ss_pred             -cccceeeeeecccCC
Q psy2674         160 -EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 -~~~~~~~~~~pe~~~  174 (183)
                       ...++..|+|||.+.
T Consensus       169 ~~~~~~~~y~aPE~~~  184 (308)
T cd06634         169 NXFVGTPYWMAPEVIL  184 (308)
T ss_pred             ccccCCccccCHHHHh
Confidence             455678899999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.92  E-value=2.5e-24  Score=163.86  Aligned_cols=157  Identities=21%  Similarity=0.307  Sum_probs=128.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------CccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~   74 (183)
                      |.-.++.++++.+..++..||+|.+... ......+.+.+|+++++.++|+||+++.+++...      ...+++++++ 
T Consensus        26 g~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-  104 (345)
T cd07877          26 GSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-  104 (345)
T ss_pred             eecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-
Confidence            3446778899998899999999998743 2333345678899999999999999999988643      3367788876 


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+.+...                .+++..++.++.|++.|+.|||+++++|+||+|+||+++.++.++|+|||++.
T Consensus       105 ~~~L~~~~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~  168 (345)
T cd07877         105 GADLNNIVKCQ----------------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR  168 (345)
T ss_pred             ccCHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccc
Confidence            58898877533                47889999999999999999999999999999999999999999999999988


Q ss_pred             CCCcc--cccceeeeeecccCCC
Q psy2674         155 DTYQK--EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~--~~~~~~~~~~pe~~~~  175 (183)
                      .....  ...++.+|+|||++.+
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~  191 (345)
T cd07877         169 HTDDEMTGYVATRWYRAPEIMLN  191 (345)
T ss_pred             cccccccccccCCCccCHHHHhC
Confidence            65433  3566889999998755

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=6.8e-24  Score=155.95  Aligned_cols=166  Identities=16%  Similarity=0.287  Sum_probs=134.9

Q ss_pred             CCCCCceeeeccCCC-CcceEEEeeccCC---------CCHHHHHHHHHHHHHHhc-CCCcceeeEEeEEecCCccEEEE
Q psy2674           2 SLIPNARGLKASDPQ-DTSVLMAKSLVHS---------KDDEALHEFKREIDLFCK-LDHAHVVKMIGICRDGDPHYLLL   70 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~-~~~~vavK~~~~~---------~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~~~~~~lv~   70 (183)
                      |.-..+.+|++.+.. +++.+|+|.+...         ........+.+|+.++.. ++|+|++++++.+.+.+..++++
T Consensus         9 g~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   88 (269)
T cd08528           9 GSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVM   88 (269)
T ss_pred             cCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEE
Confidence            445678899888877 7889999987522         223344567789998876 69999999999999999999999


Q ss_pred             eeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEec
Q psy2674          71 EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISL  149 (183)
Q Consensus        71 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~d  149 (183)
                      ||+++++|.+.+.....           ....+++..++.++.|++.++.+||+ .+++|+||+|.||+++.++.++++|
T Consensus        89 e~~~~~~l~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~d  157 (269)
T cd08528          89 DLIEGAPLGEHFNSLKE-----------KKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITD  157 (269)
T ss_pred             ecCCCCcHHHHHHHHHh-----------ccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEec
Confidence            99999999998865321           11258889999999999999999996 6899999999999999999999999


Q ss_pred             ccCCCCCCcc----cccceeeeeecccCCCccc
Q psy2674         150 SGLSKDTYQK----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       150 fg~a~~~~~~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      ||.+......    ...++..|+|||...+..+
T Consensus       158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~  190 (269)
T cd08528         158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPY  190 (269)
T ss_pred             ccceeecccccccccccCcccCcChhhhcCCCC
Confidence            9999865443    3445778999999887554

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.92  E-value=7.2e-24  Score=155.20  Aligned_cols=160  Identities=20%  Similarity=0.270  Sum_probs=128.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--.++.||++.. .++..+++|.+...  ....+.+.+|+++++.++|+|++++.+.+.+ ...++++||+++++|.++
T Consensus        15 g~g~~~~vy~~~~-~~~~~~~iK~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~   90 (260)
T cd05073          15 GAGQFGEVWMATY-NKHTKVAVKTMKPG--SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDF   90 (260)
T ss_pred             cCccceEEEEEEe-cCCccEEEEecCCC--hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHH
Confidence            3445678888864 35567899987643  2234578899999999999999999999887 778999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.++.+||+.+++|+||+|+||+++..+.++++|||.+....... 
T Consensus        91 ~~~~~~-------------~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~  157 (260)
T cd05073          91 LKSDEG-------------SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY  157 (260)
T ss_pred             HHhCCc-------------cccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc
Confidence            876422             246778889999999999999999999999999999999999999999999987543321 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||++.+..+
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~~~  180 (260)
T cd05073         158 TAREGAKFPIKWTAPEAINFGSF  180 (260)
T ss_pred             ccccCCcccccccCHhHhccCCc
Confidence                 122456999999876543

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>KOG1035|consensus

Probab=99.92  E-value=5.1e-25  Score=181.10  Aligned_cols=177  Identities=21%  Similarity=0.266  Sum_probs=122.2

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEee--------
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY--------   72 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~--------   72 (183)
                      +|--++|.|++++..-+|+.+|+|++...........+.+|+..+..++|||+++++..|.....-.-.+|.        
T Consensus       487 LGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~  566 (1351)
T KOG1035|consen  487 LGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESR  566 (1351)
T ss_pred             hcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhh
Confidence            366789999999999999999999999665667778899999999999999999999776542211111111        


Q ss_pred             ----------------CCCCCHH--HHHHhhccC---C--------------------CCC---CCCC------------
Q psy2674          73 ----------------TDWGDLK--QFLLATRKD---S--------------------KDK---SGSG------------   96 (183)
Q Consensus        73 ----------------~~~~~L~--~~~~~~~~~---~--------------------~~~---~~~~------------   96 (183)
                                      ..-.++.  ..-......   +                    .+.   +...            
T Consensus       567 sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~  646 (1351)
T KOG1035|consen  567 SQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTS  646 (1351)
T ss_pred             cccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcch
Confidence                            0000000  000000000   0                    000   0000            


Q ss_pred             -----------CCC----------------------------CCCC--CHHHHHHHHHHHHHHHHHHhcCCceecccccc
Q psy2674          97 -----------KPR----------------------------VRSL--STSQAVTMAYQVALGLEHISDKRLIHKDIAAR  135 (183)
Q Consensus        97 -----------~~~----------------------------~~~~--~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~  135 (183)
                                 ..+                            ...+  .....+.++.+|+.||.|+|++|+|||||||.
T Consensus       647 ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~  726 (1351)
T KOG1035|consen  647 ESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPR  726 (1351)
T ss_pred             hhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcc
Confidence                       000                            0012  24568889999999999999999999999999


Q ss_pred             eeEeccCCceEEecccCCCCCC-----------------------cccccceeeeeecccCCCcc
Q psy2674         136 NCLISSDLSVKISLSGLSKDTY-----------------------QKEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       136 nil~~~~~~~ki~dfg~a~~~~-----------------------~~~~~~~~~~~~pe~~~~~~  177 (183)
                      ||+++....+||+|||+|....                       .....||..|+|||++.+..
T Consensus       727 NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~  791 (1351)
T KOG1035|consen  727 NIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS  791 (1351)
T ss_pred             eeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence            9999999999999999997511                       01357799999999998765

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.92  E-value=1.6e-24  Score=164.39  Aligned_cols=158  Identities=24%  Similarity=0.379  Sum_probs=131.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC-----CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG-----DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~   75 (183)
                      |.-..+.+|++.+..++..||+|.+... ........+.+|+.+++.++|+||+++++++...     ...++++||++ 
T Consensus        14 g~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-   92 (337)
T cd07858          14 GRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-   92 (337)
T ss_pred             ccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-
Confidence            4456788999999999999999998642 2222344677899999999999999999988653     34799999997 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+...+               .+++..+..++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++..
T Consensus        93 ~~L~~~~~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~  157 (337)
T cd07858          93 TDLHQIIRSSQ---------------TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLART  157 (337)
T ss_pred             CCHHHHHhcCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence            78988886543               488999999999999999999999999999999999999999999999999985


Q ss_pred             CCcc-----cccceeeeeecccCCC
Q psy2674         156 TYQK-----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       156 ~~~~-----~~~~~~~~~~pe~~~~  175 (183)
                      ....     ...++.+|+|||.+.+
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~  182 (337)
T cd07858         158 TSEKGDFMTEYVVTRWYRAPELLLN  182 (337)
T ss_pred             cCCCcccccccccccCccChHHHhc
Confidence            5432     3456788999998754

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG0665|consensus

Probab=99.92  E-value=2.1e-25  Score=161.08  Aligned_cols=152  Identities=22%  Similarity=0.359  Sum_probs=130.2

Q ss_pred             eeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeCCCCCHHHH
Q psy2674           9 GLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         9 ~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~~~~L~~~   81 (183)
                      +-.+.+...+++||+|.+... .+...-.+..+|..++..++|+|++++..+|+-+.      ..|++||+++ .+|.+.
T Consensus        32 v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~-~nl~~v  110 (369)
T KOG0665|consen   32 VVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMD-ANLCQV  110 (369)
T ss_pred             EEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhh-hHHHHH
Confidence            566778889999999998632 22222237789999999999999999999997543      4799999998 899988


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +...                 ++......++.|++.|+++||+.||+|||+||+||++..+...||.|||+|+....+  
T Consensus       111 i~~e-----------------lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~  173 (369)
T KOG0665|consen  111 ILME-----------------LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFM  173 (369)
T ss_pred             HHHh-----------------cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcccc
Confidence            8733                 788999999999999999999999999999999999999999999999999965543  


Q ss_pred             --cccceeeeeecccCCCccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~  178 (183)
                        ++..++.|.|||++.|..|
T Consensus       174 mtpyVvtRyyrapevil~~~~  194 (369)
T KOG0665|consen  174 MTPYVVTRYYRAPEVILGMGY  194 (369)
T ss_pred             cCchhheeeccCchheeccCC
Confidence              6788999999999998765

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.92  E-value=1.9e-23  Score=153.85  Aligned_cols=168  Identities=25%  Similarity=0.341  Sum_probs=129.4

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEe
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLE   71 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e   71 (183)
                      |-...+.+|++..   ..++..+|+|++... ......+++.+|++.++.++|||++++++++....      ..++++|
T Consensus         8 g~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~   87 (273)
T cd05074           8 GKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILP   87 (273)
T ss_pred             cCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEe
Confidence            3445667787764   456899999998743 34455667899999999999999999999986532      2368889


Q ss_pred             eCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEeccc
Q psy2674          72 YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG  151 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg  151 (183)
                      |+.+++|..++.......         ....++....+.++.|++.++.|||+.+++|+||+|+||+++.++.++++|||
T Consensus        88 ~~~~~~l~~~~~~~~~~~---------~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg  158 (273)
T cd05074          88 FMKHGDLHTFLLMSRIGE---------EPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFG  158 (273)
T ss_pred             cCCCCcHHHHHHHhcccC---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccc
Confidence            999999998875432100         01247888899999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccc-------ccceeeeeecccCCCccc
Q psy2674         152 LSKDTYQKE-------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       152 ~a~~~~~~~-------~~~~~~~~~pe~~~~~~~  178 (183)
                      +++......       ..++..|++||.+.+..+
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~  192 (273)
T cd05074         159 LSKKIYSGDYYRQGCASKLPVKWLALESLADNVY  192 (273)
T ss_pred             ccccccCCcceecCCCccCchhhcCHhHHhcCcc
Confidence            988653321       223456889998766543

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.92  E-value=2.3e-24  Score=159.25  Aligned_cols=160  Identities=25%  Similarity=0.350  Sum_probs=135.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |....+.+|++....+++++++|.+.... .......+.+|+..++.++|+|++++.+++.+.+..++++|+++ ++|.+
T Consensus         8 g~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~   86 (282)
T cd07829           8 GEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MDLKK   86 (282)
T ss_pred             cccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cCHHH
Confidence            33456789999999999999999988543 22233467789999999999999999999999999999999998 69999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++.....              .+++..+..++.+++.++.+||+++++|+||+|+||+++.++.++|+|||++...... 
T Consensus        87 ~i~~~~~--------------~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~  152 (282)
T cd07829          87 YLDKRPG--------------PLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL  152 (282)
T ss_pred             HHHhhcc--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence            9976532              5889999999999999999999999999999999999999999999999998755432 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ....+.+|+|||.+.+.
T Consensus       153 ~~~~~~~~~~~~~aPE~~~~~  173 (282)
T cd07829         153 RTYTHEVVTLWYRAPEILLGS  173 (282)
T ss_pred             cccCccccCcCcCChHHhcCC
Confidence                23446789999997654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.92  E-value=8.4e-24  Score=156.60  Aligned_cols=162  Identities=22%  Similarity=0.308  Sum_probs=131.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcC---CCcceeeEEeEEecCCc-----cEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKL---DHAHVVKMIGICRDGDP-----HYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~~~~-----~~lv~e~   72 (183)
                      |....+.+|++....++.++|+|.+.... .......+.+|+.+++.+   +|+|++++++.+.+.+.     .++++|+
T Consensus         8 ~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~   87 (287)
T cd07838           8 GEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEH   87 (287)
T ss_pred             cccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehh
Confidence            44567789999998899999999997432 222234566788777666   59999999999987766     8999999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      +. ++|.+++.....             ..+++..++.++.|++.|+.+||+.+++|+|++|+||+++.++.++|+|||+
T Consensus        88 ~~-~~l~~~l~~~~~-------------~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~  153 (287)
T cd07838          88 VD-QDLATYLSKCPK-------------PGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGL  153 (287)
T ss_pred             cc-cCHHHHHHHccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCc
Confidence            98 689888866432             1478999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc----cccceeeeeecccCCCcc
Q psy2674         153 SKDTYQK----EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       153 a~~~~~~----~~~~~~~~~~pe~~~~~~  177 (183)
                      +......    ...++..|+|||++.+..
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~  182 (287)
T cd07838         154 ARIYSFEMALTSVVVTLWYRAPEVLLQSS  182 (287)
T ss_pred             ceeccCCcccccccccccccChHHhccCC
Confidence            8765432    234567899999987654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0695|consensus

Probab=99.92  E-value=4.6e-25  Score=161.21  Aligned_cols=163  Identities=18%  Similarity=0.293  Sum_probs=144.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-..|+|..++..++.+.+|+|++++.  .++++.+..+.|-.+..+- +||.++.+...|..++.++++.||..||+|
T Consensus       259 grgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvieyv~ggdl  338 (593)
T KOG0695|consen  259 GRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVIEYVNGGDL  338 (593)
T ss_pred             cCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEEEEecCcce
Confidence            4556788999999999999999999743  4556666778888888777 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      .=++.+..               .++++-++.+..+|+.++.|||+.||+.||+|.+|+|++..|.+|+.|+|.++... 
T Consensus       339 mfhmqrqr---------------klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~  403 (593)
T KOG0695|consen  339 MFHMQRQR---------------KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG  403 (593)
T ss_pred             eeehhhhh---------------cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence            88777664               49999999999999999999999999999999999999999999999999998543 


Q ss_pred             ----cccccceeeeeecccCCCcccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          .+.++||+.|.|||+++|..|+
T Consensus       404 ~gd~tstfcgtpnyiapeilrgeeyg  429 (593)
T KOG0695|consen  404 PGDTTSTFCGTPNYIAPEILRGEEYG  429 (593)
T ss_pred             CCcccccccCCCcccchhhhcccccC
Confidence                2468999999999999998874

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.92  E-value=6.6e-24  Score=160.73  Aligned_cols=158  Identities=20%  Similarity=0.308  Sum_probs=128.0

Q ss_pred             CCCCCceeeeccCCCC--cceEEEeeccCC-CCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC----CccEEEEeeC
Q psy2674           2 SLIPNARGLKASDPQD--TSVLMAKSLVHS-KDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG----DPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~--~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~----~~~~lv~e~~   73 (183)
                      |.-.++.+|++.+..+  +..+|+|.+... ......+.+.+|+.+++.+ +|+||+++++.+...    ...+++++++
T Consensus         9 g~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~   88 (332)
T cd07857           9 GQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELM   88 (332)
T ss_pred             cccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEecc
Confidence            4456778899988887  999999998743 2223345678899999999 699999999875432    3567888988


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      + ++|.+.+....               .+++..++.++.|++.|+++||++|++|+||+|+||+++.++.++|+|||++
T Consensus        89 ~-~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a  152 (332)
T cd07857          89 E-ADLHQIIRSGQ---------------PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLA  152 (332)
T ss_pred             c-CCHHHHHhcCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence            7 78988886542               4889999999999999999999999999999999999999999999999998


Q ss_pred             CCCCc---------ccccceeeeeecccCCC
Q psy2674         154 KDTYQ---------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       154 ~~~~~---------~~~~~~~~~~~pe~~~~  175 (183)
                      .....         ....++..|+|||...+
T Consensus       153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~  183 (332)
T cd07857         153 RGFSENPGENAGFMTEYVATRWYRAPEIMLS  183 (332)
T ss_pred             eecccccccccccccCcccCccccCcHHHhC
Confidence            75432         12467888999998755

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=4.6e-24  Score=162.20  Aligned_cols=156  Identities=21%  Similarity=0.339  Sum_probs=127.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~   74 (183)
                      |....+.+|++.+..++..||+|.+... ........+.+|+.+++.++|+||+++.+++....      ..++++||+.
T Consensus        24 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~  103 (342)
T cd07879          24 GSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ  103 (342)
T ss_pred             eecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEecccc
Confidence            4456678999999999999999998632 22333346789999999999999999999987543      3589999987


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       .+|.+....                 .+++..+..++.|++.|+.+||+++++||||+|+||+++.++.++++|||++.
T Consensus       104 -~~l~~~~~~-----------------~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~  165 (342)
T cd07879         104 -TDLQKIMGH-----------------PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLAR  165 (342)
T ss_pred             -cCHHHHHcC-----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCc
Confidence             577665421                 47888999999999999999999999999999999999999999999999998


Q ss_pred             CCCcc--cccceeeeeecccCCC
Q psy2674         155 DTYQK--EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~--~~~~~~~~~~pe~~~~  175 (183)
                      .....  ...++.+|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~  188 (342)
T cd07879         166 HADAEMTGYVVTRWYRAPEVILN  188 (342)
T ss_pred             CCCCCCCCceeeecccChhhhcC
Confidence            65332  3566889999999765

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>KOG0983|consensus

Probab=99.91  E-value=1.5e-24  Score=154.33  Aligned_cols=160  Identities=13%  Similarity=0.157  Sum_probs=139.1

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      +|.-..+.|.+++..++|...|||.+....+.+...++...+.++.+. .+|+|++.+|+|......++.||.|. ..+.
T Consensus       100 lGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~e  178 (391)
T KOG0983|consen  100 LGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TCAE  178 (391)
T ss_pred             hcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHHH
Confidence            456667889999999999999999999888888888999999988888 59999999999999888999999886 7788


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .++.+...              +++|..+-.+...+..||.||-. ++++|||+||+|||+|..|.+|++|||++.....
T Consensus       179 kLlkrik~--------------piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd  244 (391)
T KOG0983|consen  179 KLLKRIKG--------------PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD  244 (391)
T ss_pred             HHHHHhcC--------------CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeec
Confidence            88877654              68888888888899999999986 4899999999999999999999999999976544


Q ss_pred             c----cccceeeeeecccCCC
Q psy2674         159 K----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~----~~~~~~~~~~pe~~~~  175 (183)
                      +    ..-|.+.||+||-+.-
T Consensus       245 SkAhtrsAGC~~YMaPERidp  265 (391)
T KOG0983|consen  245 SKAHTRSAGCAAYMAPERIDP  265 (391)
T ss_pred             ccccccccCCccccCccccCC
Confidence            3    4556789999999753

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.91  E-value=7.5e-24  Score=157.95  Aligned_cols=161  Identities=15%  Similarity=0.172  Sum_probs=131.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |....+.+|++....++..+|+|.+...........+.+|+..+... .|+||+++++++.++...++++||++ +++.+
T Consensus        24 g~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~  102 (296)
T cd06618          24 GSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TCLDK  102 (296)
T ss_pred             eccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cCHHH
Confidence            34456789999998889999999997554444455677788777666 59999999999999999999999986 67887


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      .+.....              .+++..+..++.+++.++.|||+ .+++|+||+|+||+++.++.++|+|||++......
T Consensus       103 l~~~~~~--------------~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~  168 (296)
T cd06618         103 LLKRIQG--------------PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS  168 (296)
T ss_pred             HHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence            7765432              57888899999999999999997 59999999999999999999999999998754322


Q ss_pred             ----cccceeeeeecccCCCcc
Q psy2674         160 ----EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~  177 (183)
                          ...++..|+|||.+.+..
T Consensus       169 ~~~~~~~~~~~y~aPE~~~~~~  190 (296)
T cd06618         169 KAKTRSAGCAAYMAPERIDPPD  190 (296)
T ss_pred             CcccCCCCCccccCHhhcCCCC
Confidence                223466899999987653

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0200|consensus

Probab=99.91  E-value=9.6e-24  Score=170.57  Aligned_cols=160  Identities=30%  Similarity=0.528  Sum_probs=132.9

Q ss_pred             CcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhc-cCCCCCCC
Q psy2674          17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR-KDSKDKSG   94 (183)
Q Consensus        17 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~   94 (183)
                      ....||||.+.......+.+.+..|+++++.+ +|+|++.+.+.|...+..+++.||+..|+|.++++... ........
T Consensus       327 ~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~  406 (609)
T KOG0200|consen  327 IYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSG  406 (609)
T ss_pred             ceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccC
Confidence            37799999999777777888999999999999 79999999999999999999999999999999998876 11111111


Q ss_pred             CCCCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccccc--------e
Q psy2674          95 SGKPRV--RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------Y  164 (183)
Q Consensus        95 ~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~~~--------~  164 (183)
                        ....  ..++..+.+.+++||+.|++||++.+++|||+..+|||+..+..+||+|||+|+......++.        .
T Consensus       407 --~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP  484 (609)
T KOG0200|consen  407 --VFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLP  484 (609)
T ss_pred             --CCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccc
Confidence              1111  248899999999999999999999999999999999999999999999999999766655443        1


Q ss_pred             eeeeecccCCCccc
Q psy2674         165 RWVICSNIAEGRRL  178 (183)
Q Consensus       165 ~~~~~pe~~~~~~~  178 (183)
                      -.++|||.+....|
T Consensus       485 ~kWmApEsl~~~~f  498 (609)
T KOG0200|consen  485 VKWMAPESLFDRVF  498 (609)
T ss_pred             eeecCHHHhccCcc
Confidence            23778899877444

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.91  E-value=3.3e-24  Score=160.55  Aligned_cols=159  Identities=25%  Similarity=0.316  Sum_probs=126.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC--------ccEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAHVVKMIGICRDGD--------PHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--------~~~lv~e~   72 (183)
                      |--..+.+|++.+..++..+++|.+..... ......+.+|++.++.++|+||+++.+.+.+..        ..++++||
T Consensus        17 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~   96 (311)
T cd07866          17 GEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPY   96 (311)
T ss_pred             ccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEec
Confidence            345667899999999999999999863321 112235678999999999999999999875533        36899999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++ ++|...+.....              .+++..+..++.|++.+|.|||+++++|+|++|+||+++.++.++++|||+
T Consensus        97 ~~-~~l~~~~~~~~~--------------~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~  161 (311)
T cd07866          97 MD-HDLSGLLENPSV--------------KLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGL  161 (311)
T ss_pred             CC-cCHHHHHhcccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCcc
Confidence            87 677776654322              588999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc----------------cccceeeeeecccCCC
Q psy2674         153 SKDTYQK----------------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       153 a~~~~~~----------------~~~~~~~~~~pe~~~~  175 (183)
                      +......                ...++.+|+|||.+.+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (311)
T cd07866         162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG  200 (311)
T ss_pred             chhccCCCcccccCCcccccccccceeccCcCChHHhhC
Confidence            8744321                1234677999998754

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG0596|consensus

Probab=99.91  E-value=4.8e-24  Score=163.62  Aligned_cols=158  Identities=16%  Similarity=0.204  Sum_probs=132.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.-++||++.....+-..+.|+.....+.+..+.+.+|+.+|.++ .|.+|++++++-..++.+|+|||+-+ .+|.+
T Consensus       370 G~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE~Gd-~DL~k  448 (677)
T KOG0596|consen  370 GSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVMECGD-IDLNK  448 (677)
T ss_pred             cCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEeeccc-ccHHH
Confidence            44556788888766555555555555788888899999999999999 69999999999999999999999865 89999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+.....              ..+...+..+..|++.++.+.|+.||||.||||.|+|+ -.|.+||+|||+|..+..+ 
T Consensus       449 iL~k~~~--------------~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DT  513 (677)
T KOG0596|consen  449 ILKKKKS--------------IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDT  513 (677)
T ss_pred             HHHhccC--------------CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCccc
Confidence            9987653              33434788889999999999999999999999999999 6789999999999876653 


Q ss_pred             ------cccceeeeeecccCCC
Q psy2674         160 ------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~~  175 (183)
                            ..+||..||+||-+..
T Consensus       514 TsI~kdsQvGT~NYMsPEAl~~  535 (677)
T KOG0596|consen  514 TSIVKDSQVGTVNYMSPEALTD  535 (677)
T ss_pred             cceeeccccCcccccCHHHHhh
Confidence                  5689999999999754

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.91  E-value=1.3e-23  Score=159.33  Aligned_cols=147  Identities=13%  Similarity=0.049  Sum_probs=113.4

Q ss_pred             CCCCCceeeeccCCC-CcceEEEeeccCC----CCHHHHHHHHHHHHHHhcCCCcceee-EEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQ-DTSVLMAKSLVHS----KDDEALHEFKREIDLFCKLDHAHVVK-MIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~-~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~-~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |.-.+|.||+|.+.. ++..+|+|.+...    ......+.+.+|+++++.++|+|++. +++.    +..+++|||++|
T Consensus        27 G~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~~~~LVmE~~~G  102 (365)
T PRK09188         27 KRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----GKDGLVRGWTEG  102 (365)
T ss_pred             eecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----CCcEEEEEccCC
Confidence            556788999998766 7788899986532    13445667899999999999999985 4432    467999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceeccc-ccceeEeccCCceEEecccCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI-AARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di-~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      ++|.. .  . .               ..   ...++.+++.+|.+||++|++|||| ||.|||++.++.++|+|||+|+
T Consensus       103 ~~L~~-~--~-~---------------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~  160 (365)
T PRK09188        103 VPLHL-A--R-P---------------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS  160 (365)
T ss_pred             CCHHH-h--C-c---------------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence            98962 1  1 0               11   1456789999999999999999999 9999999988999999999998


Q ss_pred             CCCccc-------------ccceeeeeecccCC
Q psy2674         155 DTYQKE-------------YYKYRWVICSNIAE  174 (183)
Q Consensus       155 ~~~~~~-------------~~~~~~~~~pe~~~  174 (183)
                      ......             ..++..|.+||.+.
T Consensus       161 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        161 VFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             ecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            544321             23455688899874

>KOG1006|consensus

Probab=99.91  E-value=2.7e-25  Score=157.33  Aligned_cols=168  Identities=13%  Similarity=0.137  Sum_probs=138.2

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      +|.-+++.|.+..+..+|+..|||.+....+.....++..|.+...+- ++|||++++|.+..++-+|+.||.|+ .+|.
T Consensus        72 iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~SlD  150 (361)
T KOG1006|consen   72 IGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-ISLD  150 (361)
T ss_pred             hcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-hhHH
Confidence            366788999999999999999999998666655666889999877666 89999999999999999999999998 8888


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+.......          ....++|...-.+....+.||.||-.. .|+|||+||+|||++..|.+|++|||++.....
T Consensus       151 klYk~vy~v----------q~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~  220 (361)
T KOG1006|consen  151 KLYKRVYSV----------QKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD  220 (361)
T ss_pred             HHHHHHHHH----------HhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence            777654321          113578888888888889999999754 899999999999999999999999999986544


Q ss_pred             c----cccceeeeeecccCCC--cccc
Q psy2674         159 K----EYYKYRWVICSNIAEG--RRLN  179 (183)
Q Consensus       159 ~----~~~~~~~~~~pe~~~~--~~~~  179 (183)
                      +    ...|.+.|+|||-+..  +.||
T Consensus       221 SiAkT~daGCrpYmAPERi~p~~~gyD  247 (361)
T KOG1006|consen  221 SIAKTVDAGCRPYMAPERIDPSDKGYD  247 (361)
T ss_pred             HHHhhhccCCccccChhccCCccCCcc
Confidence            3    4567788999999753  4454

>KOG4278|consensus

Probab=99.91  E-value=1.6e-24  Score=168.89  Aligned_cols=154  Identities=23%  Similarity=0.401  Sum_probs=132.5

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhh
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLAT   85 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   85 (183)
                      .+.||...-..-...||||-++..  ....+.|..|+.+++.++|||++++.++|..+..+|||+|||.+|+|.++++..
T Consensus       280 YGeVYeGvWKkyslTvAVKtLKED--tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRec  357 (1157)
T KOG4278|consen  280 YGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLREC  357 (1157)
T ss_pred             ccceeeeeeeccceeeehhhhhhc--chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHh
Confidence            455666666777889999998643  334678999999999999999999999999999999999999999999999988


Q ss_pred             ccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcccccc--
Q psy2674          86 RKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--  163 (183)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~~~--  163 (183)
                      .+             ..++....++++.||.++++||..+++||||+..+|+|+..++.+|++|||+++.+..+.|..  
T Consensus       358 nr-------------~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHA  424 (1157)
T KOG4278|consen  358 NR-------------SEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHA  424 (1157)
T ss_pred             ch-------------hhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceeccc
Confidence            54             357778889999999999999999999999999999999999999999999999888876543  


Q ss_pred             ----eeeeeecccCC
Q psy2674         164 ----YRWVICSNIAE  174 (183)
Q Consensus       164 ----~~~~~~pe~~~  174 (183)
                          .--|.|||.+.
T Consensus       425 GAKFPIKWTAPEsLA  439 (1157)
T KOG4278|consen  425 GAKFPIKWTAPESLA  439 (1157)
T ss_pred             CccCcccccCccccc
Confidence                12356777764

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.91  E-value=4.4e-24  Score=162.39  Aligned_cols=157  Identities=22%  Similarity=0.339  Sum_probs=131.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc------cEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP------HYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e~~~   74 (183)
                      |....+.+|++.+..++..+|+|.+... ........+.+|+.+++.++|+|++++.+++...+.      .++++|+++
T Consensus        24 g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~  103 (343)
T cd07851          24 GSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLMG  103 (343)
T ss_pred             ccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecCC
Confidence            3445678999999999999999998643 233344567889999999999999999988776554      899999985


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       ++|.+.+...                .+++..++.++.|++.++.+||+.|++|+||+|+||+++.++.++|+|||++.
T Consensus       104 -~~L~~~~~~~----------------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~  166 (343)
T cd07851         104 -ADLNNIVKCQ----------------KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLAR  166 (343)
T ss_pred             -CCHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEccccccc
Confidence             7998888642                48899999999999999999999999999999999999999999999999998


Q ss_pred             CCCcc--cccceeeeeecccCCC
Q psy2674         155 DTYQK--EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~--~~~~~~~~~~pe~~~~  175 (183)
                      .....  ...++.+|+|||++.+
T Consensus       167 ~~~~~~~~~~~~~~y~aPE~~~~  189 (343)
T cd07851         167 HTDDEMTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             cccccccCCcccccccCHHHHhC
Confidence            65433  4566889999998754

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.91  E-value=1.3e-23  Score=155.92  Aligned_cols=160  Identities=16%  Similarity=0.225  Sum_probs=130.5

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCCC---CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHSK---DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-..+.+|++..   ..++..+|+|.+....   .......+.+|++++..+ +|++++++.+.+..+...++++||++
T Consensus         9 g~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   88 (288)
T cd05583           9 GTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVN   88 (288)
T ss_pred             ccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCC
Confidence            3445667776654   4578899999986332   122345678899999999 69999999999999889999999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+.+....               .+++..+..++.|++.++.+||+.+++|+||+|+||+++.++.++++|||++.
T Consensus        89 ~~~L~~~~~~~~---------------~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~  153 (288)
T cd05583          89 GGELFTHLYQRE---------------HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSK  153 (288)
T ss_pred             CCcHHHHHhhcC---------------CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccc
Confidence            999998886542               47888899999999999999999999999999999999999999999999987


Q ss_pred             CCCcc------cccceeeeeecccCCCc
Q psy2674         155 DTYQK------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       155 ~~~~~------~~~~~~~~~~pe~~~~~  176 (183)
                      .....      ...++..|++||.+.+.
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~  181 (288)
T cd05583         154 EFLAEEEERAYSFCGTIEYMAPEVIRGG  181 (288)
T ss_pred             ccccccccccccccCCccccCHHHhcCC
Confidence            64432      23457789999997653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.91  E-value=9.1e-24  Score=160.61  Aligned_cols=156  Identities=25%  Similarity=0.373  Sum_probs=127.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--------------CccE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--------------DPHY   67 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------------~~~~   67 (183)
                      |....+.||++.+..++..|++|.+..... ...+.+.+|+++++.++|+||+++++.+...              ...+
T Consensus        14 g~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (342)
T cd07854          14 GCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVY   92 (342)
T ss_pred             cCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEE
Confidence            556678899999999999999999874433 3345688999999999999999999876543              3478


Q ss_pred             EEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-cCCceE
Q psy2674          68 LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSVK  146 (183)
Q Consensus        68 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-~~~~~k  146 (183)
                      +++||++ ++|.+.+...                .+++..++.++.|++.|+.+||+.|++|+||+|+||+++ .++.++
T Consensus        93 lv~e~~~-~~L~~~~~~~----------------~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~k  155 (342)
T cd07854          93 IVQEYME-TDLANVLEQG----------------PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLK  155 (342)
T ss_pred             EEeeccc-ccHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEE
Confidence            9999998 6888877532                478899999999999999999999999999999999997 556789


Q ss_pred             EecccCCCCCCc--------ccccceeeeeecccCCC
Q psy2674         147 ISLSGLSKDTYQ--------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       147 i~dfg~a~~~~~--------~~~~~~~~~~~pe~~~~  175 (183)
                      ++|||.+.....        ....++.+|+|||++.+
T Consensus       156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  192 (342)
T cd07854         156 IGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLS  192 (342)
T ss_pred             ECCcccceecCCccccccccccccccccccCHHHHhC
Confidence            999999875422        12245778999998644

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>KOG0696|consensus

Probab=99.91  E-value=4.2e-25  Score=165.01  Aligned_cols=163  Identities=20%  Similarity=0.230  Sum_probs=139.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.+++|..+....+.+.+|+|++++.--  +.+.+....|-.+|+.. +-|.++.+...|+..+.+|+||||+.||+|
T Consensus       358 GKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDL  437 (683)
T KOG0696|consen  358 GKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDL  437 (683)
T ss_pred             ccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchh
Confidence            445678999999999999999999975321  11233456677777777 788999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC--
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT--  156 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~--  156 (183)
                      .-.+...++               +-+..++.++.+|+.||-+||++||+.||+|.+|||++.+|.+||+|||+++..  
T Consensus       438 MyhiQQ~Gk---------------FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~  502 (683)
T KOG0696|consen  438 MYHIQQVGK---------------FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF  502 (683)
T ss_pred             hhHHHHhcc---------------cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence            999988765               888999999999999999999999999999999999999999999999999843  


Q ss_pred             ---CcccccceeeeeecccCCCcccc
Q psy2674         157 ---YQKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       157 ---~~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                         ....++||+-|+|||++.-.||+
T Consensus       503 ~~~TTkTFCGTPdYiAPEIi~YqPYg  528 (683)
T KOG0696|consen  503 DGVTTKTFCGTPDYIAPEIIAYQPYG  528 (683)
T ss_pred             CCcceeeecCCCcccccceEEecccc
Confidence               33578999999999999877664

>KOG2345|consensus

Probab=99.91  E-value=6.1e-24  Score=148.89  Aligned_cols=162  Identities=19%  Similarity=0.140  Sum_probs=134.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC-----CccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG-----DPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~   76 (183)
                      |.-.++.|+......++..+|+|.+.-.. .+..+...+|++..++++|||++++.++...+     .+.|++++|...|
T Consensus        30 geGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~G  108 (302)
T KOG2345|consen   30 GEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRG  108 (302)
T ss_pred             cCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccc
Confidence            45567788888899999999999987333 45567889999999999999999998886543     3589999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ceecccccceeEeccCCceEEecccCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +|.+.+.+...           ....+++...+.++.+++.|+++||+..  +.||||||.||++.+.+...+.|||.+.
T Consensus       109 sl~d~i~~~k~-----------kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen  109 SLLDEIERLKI-----------KGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             cHHHHHHHHhh-----------cCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence            99999988643           2236899999999999999999999997  9999999999999999999999999987


Q ss_pred             CCCcc--------------cccceeeeeecccCCC
Q psy2674         155 DTYQK--------------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~--------------~~~~~~~~~~pe~~~~  175 (183)
                      ...-.              ....|--|+|||++.-
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~v  212 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNV  212 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheec
Confidence            54321              1123667999999753

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.90  E-value=1.8e-23  Score=150.69  Aligned_cols=159  Identities=25%  Similarity=0.363  Sum_probs=136.9

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhh
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLAT   85 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   85 (183)
                      .+.+|++....++..+++|++.........+.+.+|++.++.++|+|++++.+.+......++++|++++++|.+++...
T Consensus         2 ~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~   81 (244)
T smart00220        2 FGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKR   81 (244)
T ss_pred             ceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhc
Confidence            46788888888999999999985544332568899999999999999999999999888999999999988999988654


Q ss_pred             ccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc----ccc
Q psy2674          86 RKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ----KEY  161 (183)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~----~~~  161 (183)
                      .               .++...++.++.+++.++.+||+.+++|+||+|+||+++.++.++++|||.+.....    ...
T Consensus        82 ~---------------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~  146 (244)
T smart00220       82 G---------------RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTF  146 (244)
T ss_pred             c---------------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccc
Confidence            2               278899999999999999999999999999999999999999999999999986654    345


Q ss_pred             cceeeeeecccCCCcccc
Q psy2674         162 YKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       162 ~~~~~~~~pe~~~~~~~~  179 (183)
                      .++..|.|||...+..++
T Consensus       147 ~~~~~~~~pE~~~~~~~~  164 (244)
T smart00220      147 VGTPEYMAPEVLLGKGYG  164 (244)
T ss_pred             cCCcCCCCHHHHccCCCC
Confidence            567789999988765544

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0671|consensus

Probab=99.90  E-value=1.4e-23  Score=154.67  Aligned_cols=166  Identities=16%  Similarity=0.171  Sum_probs=136.5

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CC-c----ceeeEEeEEecCCccEEEEeeCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DH-A----HVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h-~----~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      ||.-.+++|..|.+..++..||+|++.+-  ...+++...|+++++++ .+ |    -++.+.++|...++.++++|.++
T Consensus        97 lGeGtFGkV~ec~D~~~~~~vAlKIik~V--~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfellG  174 (415)
T KOG0671|consen   97 LGEGTFGKVVECWDRETKEHVALKIIKNV--DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELLG  174 (415)
T ss_pred             hcCCcccceEEEeecCCCceehHHHHHHH--HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEeccC
Confidence            56778899999999999999999998744  33456778899999998 33 2    26777888999999999999885


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-------------
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-------------  141 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-------------  141 (183)
                       .++.+++.....             .+++...++.+++|++.++.+||+++++|-|+||.||++-+             
T Consensus       175 -~S~~dFlk~N~y-------------~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~  240 (415)
T KOG0671|consen  175 -LSTFDFLKENNY-------------IPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKV  240 (415)
T ss_pred             -hhHHHHhccCCc-------------cccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcc
Confidence             899999976533             36889999999999999999999999999999999999821             


Q ss_pred             -------CCceEEecccCCCCCCcc--cccceeeeeecccCCC----ccccccc
Q psy2674         142 -------DLSVKISLSGLSKDTYQK--EYYKYRWVICSNIAEG----RRLNVFK  182 (183)
Q Consensus       142 -------~~~~ki~dfg~a~~~~~~--~~~~~~~~~~pe~~~~----~~~~~~~  182 (183)
                             +..++++|||.|......  ....|+.|+|||++.|    .|-|+|.
T Consensus       241 ~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWS  294 (415)
T KOG0671|consen  241 CFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWS  294 (415)
T ss_pred             ceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCcee
Confidence                   244899999999865543  4577999999999987    4556664

>KOG0670|consensus

Probab=99.90  E-value=1e-23  Score=161.08  Aligned_cols=160  Identities=17%  Similarity=0.206  Sum_probs=137.7

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC------CcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD------HAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      -++.|..|.+...|..||||++.+....  ...=+.|+++|++++      -.|+++++..|.+.+++|+|||.+. .+|
T Consensus       444 vFs~Vvra~D~~r~~~vAiKIIRnNE~M--~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Ls-lNL  520 (752)
T KOG0670|consen  444 VFSTVVRARDQARGQEVAIKIIRNNEVM--HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLS-LNL  520 (752)
T ss_pred             eeeeeeeccccCCCCeeEEEEeecchHH--hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhh-chH
Confidence            3567889999999999999999754222  123467999999985      2488999999999999999999987 999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~  157 (183)
                      ...+...+.+            -++....+..++.|++.||..|-..|++|.||||.|||++. ....||||||.|....
T Consensus       521 RevLKKyG~n------------vGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~  588 (752)
T KOG0670|consen  521 REVLKKYGRN------------VGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFAS  588 (752)
T ss_pred             HHHHHHhCcc------------cceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccc
Confidence            9999998753            35788899999999999999999999999999999999984 5678999999999887


Q ss_pred             cc---cccceeeeeecccCCCcccc
Q psy2674         158 QK---EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~---~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .+   +|+.+++|.|||++.|-+||
T Consensus       589 eneitPYLVSRFYRaPEIiLG~~yd  613 (752)
T KOG0670|consen  589 ENEITPYLVSRFYRAPEIILGLPYD  613 (752)
T ss_pred             cccccHHHHHHhccCcceeecCccc
Confidence            76   46778999999999999886

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.90  E-value=4.7e-23  Score=150.78  Aligned_cols=165  Identities=19%  Similarity=0.243  Sum_probs=130.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC----CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS----KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |--..+.+|++.+...+..+++|++...    ........+.+|+.+++.++|||++++++.+.+++..++++||+++++
T Consensus         9 g~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   88 (260)
T cd08222           9 GKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRD   88 (260)
T ss_pred             cCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCC
Confidence            4456778888888777777766665521    122233457789999999999999999999999889999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+.....           ....+++..++.++.|++.++.+||+.+++|+|++|+||+++. +.++++|||++....
T Consensus        89 l~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          89 LDCKLEELKH-----------TGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             HHHHHHHHhh-----------cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecC
Confidence            9998865321           1125889999999999999999999999999999999999965 569999999987553


Q ss_pred             cc-----cccceeeeeecccCCCccc
Q psy2674         158 QK-----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~-----~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..     ...++..|+|||...+..+
T Consensus       157 ~~~~~~~~~~~~~~~~~pe~~~~~~~  182 (260)
T cd08222         157 GSCDLATTFTGTPYYMSPEALKHQGY  182 (260)
T ss_pred             CCcccccCCCCCcCccCHHHHccCCC
Confidence            32     2345678999999876544

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>KOG0576|consensus

Probab=99.89  E-value=9.9e-25  Score=170.42  Aligned_cols=156  Identities=21%  Similarity=0.308  Sum_probs=140.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-..+.||++++..+++..|+|+++....+. ..-+++|+-+++.++|+||+-+++.+...+.+|+.||||++|+|++.
T Consensus        24 gsgTygdvyKaRd~~s~elaavkvVkLep~dd-~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdi  102 (829)
T KOG0576|consen   24 GSGTYGDVYKARDKRSGELAAVKVVKLEPGDD-FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDI  102 (829)
T ss_pred             cCCcccchhhhcccccCchhhheeeeccCCcc-ccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccce
Confidence            44567889999999999999999998655443 34678999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC----
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY----  157 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~----  157 (183)
                      ....+               ++.+.++.....+.+.|+.|+|++|-+|||||-.||++++.+.+|++|||.+..+.    
T Consensus       103 y~~Tg---------------plselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~  167 (829)
T KOG0576|consen  103 YHVTG---------------PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA  167 (829)
T ss_pred             eeecc---------------cchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhh
Confidence            87775               48999999999999999999999999999999999999999999999999987554    


Q ss_pred             -cccccceeeeeecccC
Q psy2674         158 -QKEYYKYRWVICSNIA  173 (183)
Q Consensus       158 -~~~~~~~~~~~~pe~~  173 (183)
                       ...+.||+.+|+||+.
T Consensus       168 KrksfiGtpywmapEva  184 (829)
T KOG0576|consen  168 KRKSFIGTPYWMAPEVA  184 (829)
T ss_pred             hhhcccCCccccchhHH
Confidence             4578999999999995

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.89  E-value=4.9e-22  Score=139.96  Aligned_cols=161  Identities=26%  Similarity=0.373  Sum_probs=138.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++....++.++++|...........+.+.+|++.++.++|++++++.+++...+..++++|++++++|.++
T Consensus         2 ~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~   81 (215)
T cd00180           2 GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDL   81 (215)
T ss_pred             CcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHH
Confidence            55667889999998899999999998655443456789999999999999999999999998899999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCCCCCcc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~~~-  159 (183)
                      +.....              .++...++.++.+++.++.+||+.+++|+|++|.||+++. .+.++|+|||.+...... 
T Consensus        82 ~~~~~~--------------~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~  147 (215)
T cd00180          82 LKENEG--------------KLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK  147 (215)
T ss_pred             HHhccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence            876521              4788999999999999999999999999999999999998 899999999998855443 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          .......|.+||...+.
T Consensus       148 ~~~~~~~~~~~~~~pe~~~~~  168 (215)
T cd00180         148 SLLKTIVGTPAYMAPEVLLGK  168 (215)
T ss_pred             chhhcccCCCCccChhHhccc
Confidence                24456778999987663

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.89  E-value=2.5e-22  Score=170.57  Aligned_cols=153  Identities=18%  Similarity=0.269  Sum_probs=126.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |-..++.||++....++..||+|.+......     ...|++.+++++||||+++++++.+++..+++|||+++++|.++
T Consensus       699 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~  773 (968)
T PLN00113        699 SRGKKGASYKGKSIKNGMQFVVKEINDVNSI-----PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEV  773 (968)
T ss_pred             ccCCCeeEEEEEECCCCcEEEEEEccCCccc-----cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHH
Confidence            4456788999999899999999998643221     23458889999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh---cCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS---DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh---~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      +.                  .+++..+..++.+++.|++|||   +.+++|||+||+||+++.+...++. |+.+.... 
T Consensus       774 l~------------------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~  834 (968)
T PLN00113        774 LR------------------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT  834 (968)
T ss_pred             Hh------------------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc
Confidence            84                  2678888999999999999999   6699999999999999988877765 55554332 


Q ss_pred             cccccceeeeeecccCCCccc
Q psy2674         158 QKEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~~~~~~~~~~~pe~~~~~~~  178 (183)
                      .....++..|+|||++.+..|
T Consensus       835 ~~~~~~t~~y~aPE~~~~~~~  855 (968)
T PLN00113        835 DTKCFISSAYVAPETRETKDI  855 (968)
T ss_pred             CCCccccccccCcccccCCCC
Confidence            224466789999999987655

>KOG0668|consensus

Probab=99.89  E-value=1.6e-23  Score=145.81  Aligned_cols=152  Identities=18%  Similarity=0.276  Sum_probs=127.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCC--ccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD--PHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L   78 (183)
                      |.--.+.||.+....+.+.+++|++++.+    ...+.+|+.+++.+ .+|||+++++...++.  ...+++|++.+.+.
T Consensus        47 GRGKYSEVFeg~~~~~~eK~ViKiLKPVk----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Df  122 (338)
T KOG0668|consen   47 GRGKYSEVFEGINITNNEKCVIKILKPVK----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDF  122 (338)
T ss_pred             cCccHhhHhcccccCCCceEEEeeechHH----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccH
Confidence            34445678888888999999999997543    34789999999999 5999999999998754  57799999998877


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~  157 (183)
                      ..+..                  .++...++.++.+++.|+.|||++||.|||+||.|+++|. .-..+++|+|+|....
T Consensus       123 k~ly~------------------tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYH  184 (338)
T KOG0668|consen  123 KQLYP------------------TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYH  184 (338)
T ss_pred             HHHhh------------------hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcC
Confidence            76653                  4777889999999999999999999999999999999984 5669999999999887


Q ss_pred             cccccc----eeeeeecccCCC
Q psy2674         158 QKEYYK----YRWVICSNIAEG  175 (183)
Q Consensus       158 ~~~~~~----~~~~~~pe~~~~  175 (183)
                      ++..+.    ++.|--||++-.
T Consensus       185 p~~eYnVRVASRyfKGPELLVd  206 (338)
T KOG0668|consen  185 PGKEYNVRVASRYFKGPELLVD  206 (338)
T ss_pred             CCceeeeeeehhhcCCchheee
Confidence            765443    677888998754

>KOG0199|consensus

Probab=99.89  E-value=4.8e-23  Score=162.11  Aligned_cols=149  Identities=27%  Similarity=0.381  Sum_probs=125.6

Q ss_pred             CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCC
Q psy2674          14 DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKS   93 (183)
Q Consensus        14 ~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~   93 (183)
                      ...+...||||.+...........|.+|+..+..++|+|+++++|+..+ ....+|+|.++.|+|.+.+....+      
T Consensus       134 psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~------  206 (1039)
T KOG0199|consen  134 PSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKK------  206 (1039)
T ss_pred             CCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccc------
Confidence            4556678999999865555567789999999999999999999999987 678899999999999999988543      


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-cccc-------ee
Q psy2674          94 GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-EYYK-------YR  165 (183)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-~~~~-------~~  165 (183)
                             ..+.......|+.||+.|+.||..+++||||+..+|+++....++||+|||+.+....+ ++|.       ..
T Consensus       207 -------~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPf  279 (1039)
T KOG0199|consen  207 -------AILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPF  279 (1039)
T ss_pred             -------cceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcc
Confidence                   25777888999999999999999999999999999999999999999999999966554 2322       23


Q ss_pred             eeeecccCCCc
Q psy2674         166 WVICSNIAEGR  176 (183)
Q Consensus       166 ~~~~pe~~~~~  176 (183)
                      .|.|||.++-+
T Consensus       280 AWCaPEsLrh~  290 (1039)
T KOG0199|consen  280 AWCAPESLRHR  290 (1039)
T ss_pred             cccCHhHhccc
Confidence            46788887643

>KOG0603|consensus

Probab=99.89  E-value=4.1e-23  Score=160.67  Aligned_cols=157  Identities=16%  Similarity=0.190  Sum_probs=130.2

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      .-+++.|..+.+..+++..++|++.....     ...+|+..+..+ +|+||+++.+.+.+....|++||.+.++-+.+.
T Consensus       332 ~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~r  406 (612)
T KOG0603|consen  332 EGSFSAVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRR  406 (612)
T ss_pred             CCCccceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHH
Confidence            34456678888999999999999985522     234567666665 899999999999999999999999998887777


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe-ccCCceEEecccCCCCCCcc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI-SSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~-~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      +...+                .....+..|+.+|+.++.+||++|++|||+||+|||+ +..+.++|+|||+++....+ 
T Consensus       407 i~~~~----------------~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~  470 (612)
T KOG0603|consen  407 IRSKP----------------EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSC  470 (612)
T ss_pred             HHhcc----------------hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhh
Confidence            65442                2336777899999999999999999999999999999 68999999999999987776 


Q ss_pred             -cccceeeeeecccCCCccccc
Q psy2674         160 -EYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       160 -~~~~~~~~~~pe~~~~~~~~~  180 (183)
                       .-+-|..|.|||++....||.
T Consensus       471 ~tp~~t~~y~APEvl~~~~yt~  492 (612)
T KOG0603|consen  471 DTPALTLQYVAPEVLAIQEYTE  492 (612)
T ss_pred             cccchhhcccChhhhccCCCCc
Confidence             334478899999999888863

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.89  E-value=3.4e-22  Score=148.99  Aligned_cols=161  Identities=13%  Similarity=0.059  Sum_probs=117.6

Q ss_pred             CCCCCceeeeccCCCC---cceEEEeeccCCCCHHHH----------HHHHHHHHHHhcCCCcceeeEEeEEecCC----
Q psy2674           2 SLIPNARGLKASDPQD---TSVLMAKSLVHSKDDEAL----------HEFKREIDLFCKLDHAHVVKMIGICRDGD----   64 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~---~~~vavK~~~~~~~~~~~----------~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----   64 (183)
                      |--++|.||++....+   +..+++|+..........          .....+...+..+.|++++++++.+....    
T Consensus        21 G~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~~  100 (294)
T PHA02882         21 GCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFKRCRMY  100 (294)
T ss_pred             ecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEecCCce
Confidence            4567788998887777   777888875422221111          11223344456678999999998765433    


Q ss_pred             ccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc
Q psy2674          65 PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS  144 (183)
Q Consensus        65 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~  144 (183)
                      ..+++++++. .++.+.+....               ..++..++.++.|++.|+.|||+.+++||||||+|||++.++.
T Consensus       101 ~~~~~~~~~~-~~~~~~~~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~  164 (294)
T PHA02882        101 YRFILLEKLV-ENTKEIFKRIK---------------CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNR  164 (294)
T ss_pred             EEEEEEehhc-cCHHHHHHhhc---------------cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCc
Confidence            2357777765 56777665442               2567788999999999999999999999999999999999999


Q ss_pred             eEEecccCCCCCCc------------ccccceeeeeecccCCCccc
Q psy2674         145 VKISLSGLSKDTYQ------------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       145 ~ki~dfg~a~~~~~------------~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ++|+|||+|+....            ....+|+.|+|||+..+..|
T Consensus       165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~  210 (294)
T PHA02882        165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACV  210 (294)
T ss_pred             EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCC
Confidence            99999999875421            12357899999999887655

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.89  E-value=1.5e-22  Score=141.70  Aligned_cols=136  Identities=21%  Similarity=0.100  Sum_probs=102.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHH------------------------HHHHHHHHHHHhcCCCcceeeE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEA------------------------LHEFKREIDLFCKLDHAHVVKM   56 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~------------------------~~~~~~E~~~l~~l~h~~i~~~   56 (183)
                      |.-.+|.||.|.+. +|++||+|++..... ...                        .....+|++.+..+.++++...
T Consensus         6 g~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~~p   84 (190)
T cd05147           6 STGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIPCP   84 (190)
T ss_pred             ccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
Confidence            56678999999987 899999999874321 000                        1123459999999977665332


Q ss_pred             EeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-hcCCceecccccc
Q psy2674          57 IGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAAR  135 (183)
Q Consensus        57 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~ivH~di~~~  135 (183)
                      .....  ...+++|||++++++........               .+++..+..++.|++.++.++ |+.|++||||||+
T Consensus        85 ~~~~~--~~~~iVmE~i~g~~l~~~~~~~~---------------~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~  147 (190)
T cd05147          85 EPILL--KSHVLVMEFIGDDGWAAPRLKDA---------------PLSESKARELYLQVIQIMRILYQDCRLVHADLSEY  147 (190)
T ss_pred             cEEEe--cCCEEEEEEeCCCCCcchhhhcC---------------CCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHH
Confidence            22222  23489999999877655432221               478889999999999999999 7999999999999


Q ss_pred             eeEeccCCceEEecccCCCCC
Q psy2674         136 NCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus       136 nil~~~~~~~ki~dfg~a~~~  156 (183)
                      ||+++ ++.++++|||+|...
T Consensus       148 NIli~-~~~v~LiDFG~a~~~  167 (190)
T cd05147         148 NLLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             HEEEE-CCcEEEEEccccccC
Confidence            99998 478999999999743

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1151|consensus

Probab=99.89  E-value=2.4e-22  Score=151.63  Aligned_cols=157  Identities=24%  Similarity=0.245  Sum_probs=131.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeecc-CCCC-HH----HHHHHHHHHHHHhcCCCcceeeEEeEEe-cCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLV-HSKD-DE----ALHEFKREIDLFCKLDHAHVVKMIGICR-DGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~-~~~~-~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~   74 (183)
                      |--.++.||+|.+....+-||+|+-. +..+ ++    ......+|..+-+.+.||.||+++++|. +.+.++-|+|||+
T Consensus       472 GrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYce  551 (775)
T KOG1151|consen  472 GRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCE  551 (775)
T ss_pred             ccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecC
Confidence            55678899999999999999999976 3322 21    2245678999999999999999999996 5678999999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--CceecccccceeEec---cCCceEEec
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--RLIHKDIAARNCLIS---SDLSVKISL  149 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--~ivH~di~~~nil~~---~~~~~ki~d  149 (183)
                      |.+|.=++....               .+++..++.|+-||+.+|.||...  +|||=|+||.|||+-   ..|.+||.|
T Consensus       552 GNDLDFYLKQhk---------------lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITD  616 (775)
T KOG1151|consen  552 GNDLDFYLKQHK---------------LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITD  616 (775)
T ss_pred             CCchhHHHHhhh---------------hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeee
Confidence            999988887664               489999999999999999999865  899999999999984   458899999


Q ss_pred             ccCCCCCCccc------------ccceeeeeecccC
Q psy2674         150 SGLSKDTYQKE------------YYKYRWVICSNIA  173 (183)
Q Consensus       150 fg~a~~~~~~~------------~~~~~~~~~pe~~  173 (183)
                      ||+++.+..+.            .-||.||.|||.+
T Consensus       617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcF  652 (775)
T KOG1151|consen  617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECF  652 (775)
T ss_pred             cchhhhccCCccCcccceeeecccCceeeecCccee
Confidence            99998765532            3468999999985

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.89  E-value=8.5e-22  Score=140.67  Aligned_cols=158  Identities=26%  Similarity=0.369  Sum_probs=135.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |....+.+|++....++..+++|.+.........+.+.+|++.++.++|+|++++++.+......++++|++++++|.++
T Consensus         8 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   87 (225)
T smart00221        8 GEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDY   87 (225)
T ss_pred             ecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHH
Confidence            34456789999998889999999998544333456888999999999999999999999988899999999998899999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++.....++.+++.++.+||+.+++|+|++|.||+++.++.++++|||.+......  
T Consensus        88 ~~~~~~--------------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~  153 (225)
T smart00221       88 LRKKGG--------------KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA  153 (225)
T ss_pred             HHhccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence            876532              1788899999999999999999999999999999999999999999999998865443  


Q ss_pred             ----cccceeeeeecccC
Q psy2674         160 ----EYYKYRWVICSNIA  173 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~  173 (183)
                          ...+...|++||..
T Consensus       154 ~~~~~~~~~~~~~~pe~~  171 (225)
T smart00221      154 ALLKTVKGTPFYLAPEVL  171 (225)
T ss_pred             ccccceeccCCcCCHhHh
Confidence                35567789999987

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.88  E-value=2.2e-21  Score=135.99  Aligned_cols=139  Identities=19%  Similarity=0.068  Sum_probs=106.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH-------------------------HHHHHHHHHHHHHhcCCCcceeeE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD-------------------------EALHEFKREIDLFCKLDHAHVVKM   56 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~~l~h~~i~~~   56 (183)
                      |....|.||++.+. +|+.||+|++......                         .....+.+|.+.+..+.++++...
T Consensus         6 g~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p   84 (190)
T cd05145           6 STGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVPVP   84 (190)
T ss_pred             ecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence            55678899999987 8999999998744210                         012234678999999988887544


Q ss_pred             EeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccc
Q psy2674          57 IGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAAR  135 (183)
Q Consensus        57 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~  135 (183)
                      ..+...  ..+++|||++|+++........               .++......++.|++.++.++|+ .|++||||||.
T Consensus        85 ~~~~~~--~~~lVmE~~~g~~~~~~~l~~~---------------~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~  147 (190)
T cd05145          85 EPILLK--KNVLVMEFIGDDGSPAPRLKDV---------------PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEY  147 (190)
T ss_pred             eEEEec--CCEEEEEEecCCCchhhhhhhc---------------cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChh
Confidence            433332  3489999999775543322221               36778899999999999999999 99999999999


Q ss_pred             eeEeccCCceEEecccCCCCCCcc
Q psy2674         136 NCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus       136 nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ||+++ ++.++++|||++......
T Consensus       148 NIll~-~~~~~liDFG~a~~~~~~  170 (190)
T cd05145         148 NILYH-DGKPYIIDVSQAVELDHP  170 (190)
T ss_pred             hEEEE-CCCEEEEEcccceecCCC
Confidence            99998 889999999999866543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1025|consensus

Probab=99.86  E-value=3.1e-22  Score=159.82  Aligned_cols=143  Identities=24%  Similarity=0.330  Sum_probs=122.2

Q ss_pred             CCCCCceeeeccCCC----CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQ----DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-++++||+..--.    =..+||+|++......+.-..+.+|+-.+..+.|||++++++++.... ..|+++|++.|+
T Consensus       705 GsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~  783 (1177)
T KOG1025|consen  705 GSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGC  783 (1177)
T ss_pred             ccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccch
Confidence            344555555544333    355899999987776666678999999999999999999999998654 889999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.++++....              ++.....+.|..||++|+.|||.++++||||..+|+|+.....+||.|||+|+...
T Consensus       784 LlDyvr~hr~--------------~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~  849 (1177)
T KOG1025|consen  784 LLDYVREHRD--------------NIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLA  849 (1177)
T ss_pred             HHHHHHHhhc--------------cccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence            9999988764              68889999999999999999999999999999999999999999999999999765


Q ss_pred             cc
Q psy2674         158 QK  159 (183)
Q Consensus       158 ~~  159 (183)
                      .+
T Consensus       850 ~d  851 (1177)
T KOG1025|consen  850 PD  851 (1177)
T ss_pred             cc
Confidence            54

>KOG1027|consensus

Probab=99.86  E-value=1.5e-21  Score=155.80  Aligned_cols=145  Identities=23%  Similarity=0.272  Sum_probs=116.7

Q ss_pred             CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCC
Q psy2674          15 PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKS   93 (183)
Q Consensus        15 ~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~   93 (183)
                      .-+++.||||.+...    -.+..++|++.++.- .||||+++++.-.++...||..|.|. .+|.+++.......    
T Consensus       530 ~ye~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~----  600 (903)
T KOG1027|consen  530 VYEGREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDV----  600 (903)
T ss_pred             eeCCceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccch----
Confidence            346789999997633    233568999999999 79999999999889999999999998 99999998752100    


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-----CCceEEecccCCCCCCcc--------c
Q psy2674          94 GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----DLSVKISLSGLSKDTYQK--------E  160 (183)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-----~~~~ki~dfg~a~~~~~~--------~  160 (183)
                             ........+....|+++||++||+.+|||||+||.||||+.     ..+++|+|||+++....+        +
T Consensus       601 -------~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~  673 (903)
T KOG1027|consen  601 -------EMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSG  673 (903)
T ss_pred             -------hhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccC
Confidence                   01111456777889999999999999999999999999964     367999999999866543        3


Q ss_pred             ccceeeeeecccCCC
Q psy2674         161 YYKYRWVICSNIAEG  175 (183)
Q Consensus       161 ~~~~~~~~~pe~~~~  175 (183)
                      .-||.+|+|||++.+
T Consensus       674 ~sGt~GW~APE~L~~  688 (903)
T KOG1027|consen  674 GSGTSGWQAPEQLRE  688 (903)
T ss_pred             CCCcccccCHHHHhc
Confidence            456889999999876

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.85  E-value=2.4e-20  Score=147.02  Aligned_cols=161  Identities=15%  Similarity=0.099  Sum_probs=111.0

Q ss_pred             CCCcceEEEeeccCCCCHHH-------------HHHHHHHHHHHhcCCCcce-----eeEEeEEec--------CCccEE
Q psy2674          15 PQDTSVLMAKSLVHSKDDEA-------------LHEFKREIDLFCKLDHAHV-----VKMIGICRD--------GDPHYL   68 (183)
Q Consensus        15 ~~~~~~vavK~~~~~~~~~~-------------~~~~~~E~~~l~~l~h~~i-----~~~~~~~~~--------~~~~~l   68 (183)
                      ...++.||+|.+........             .+....|+.++..++|.++     ++++++|..        ++..++
T Consensus       183 ~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~L  262 (507)
T PLN03224        183 EQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWL  262 (507)
T ss_pred             cccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEE
Confidence            34567899999864322111             1123346667777765543     556666542        356899


Q ss_pred             EEeeCCCCCHHHHHHhhccCCC---------CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe
Q psy2674          69 LLEYTDWGDLKQFLLATRKDSK---------DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI  139 (183)
Q Consensus        69 v~e~~~~~~L~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~  139 (183)
                      |+||+++++|.+++........         ............+++..+..++.|++.++.|||+.+++||||||.||++
T Consensus       263 V~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl  342 (507)
T PLN03224        263 VWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLV  342 (507)
T ss_pred             EEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEE
Confidence            9999999999999875421100         0000001112245678889999999999999999999999999999999


Q ss_pred             ccCCceEEecccCCCCCCcc----cc--cceeeeeecccCCC
Q psy2674         140 SSDLSVKISLSGLSKDTYQK----EY--YKYRWVICSNIAEG  175 (183)
Q Consensus       140 ~~~~~~ki~dfg~a~~~~~~----~~--~~~~~~~~pe~~~~  175 (183)
                      +.++.++|+|||++......    ..  ..++.|+|||.+..
T Consensus       343 ~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~  384 (507)
T PLN03224        343 TVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVM  384 (507)
T ss_pred             CCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcC
Confidence            99999999999999754332    11  22678999998753

>KOG1345|consensus

Probab=99.85  E-value=1.7e-21  Score=138.64  Aligned_cols=156  Identities=20%  Similarity=0.276  Sum_probs=126.6

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeE-EecCCccEEEEeeCCCCCH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGI-CRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~-~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|.-++|+...|.+..+...+++|-+...  .-....|.+|...--.+ .|.||+.-++. |+..+.+.+++||++.|+|
T Consensus        32 lgeG~FgkIlL~eHr~s~t~ivlKavp~p--~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL  109 (378)
T KOG1345|consen   32 LGEGRFGKILLAEHRQSKTRIVLKAVPRP--QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAPRGDL  109 (378)
T ss_pred             hcccceeeEEeeeccCCceEEEeeccCcc--hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCccchh
Confidence            35678899999999999999999998733  33345799999877777 69999987766 5556777899999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec--cCCceEEecccCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS--SDLSVKISLSGLSKDT  156 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~--~~~~~ki~dfg~a~~~  156 (183)
                      .+-+...                ++.+.....++.|+++|+.|||+.++||||||.+|||+.  +.-++|++|||++...
T Consensus       110 ~snv~~~----------------GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~  173 (378)
T KOG1345|consen  110 RSNVEAA----------------GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV  173 (378)
T ss_pred             hhhcCcc----------------cccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeeccccccc
Confidence            9877554                588999999999999999999999999999999999984  4568999999999865


Q ss_pred             Ccccccc--eeeeeecccCC
Q psy2674         157 YQKEYYK--YRWVICSNIAE  174 (183)
Q Consensus       157 ~~~~~~~--~~~~~~pe~~~  174 (183)
                      ..-..+.  +..|.+||++.
T Consensus       174 g~tV~~~~~~~~y~~pe~~~  193 (378)
T KOG1345|consen  174 GTTVKYLEYVNNYHAPELCD  193 (378)
T ss_pred             CceehhhhhhcccCCcHHHh
Confidence            5443222  34577888764

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.85  E-value=5.5e-21  Score=153.39  Aligned_cols=168  Identities=15%  Similarity=0.096  Sum_probs=109.9

Q ss_pred             CCCCCceeeeccCCCC----cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeE------EecCCccEEEEe
Q psy2674           2 SLIPNARGLKASDPQD----TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGI------CRDGDPHYLLLE   71 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~------~~~~~~~~lv~e   71 (183)
                      |--.++.||++....+    +..||+|.+......+   ....|.  ++...+.++..+...      ...+...++++|
T Consensus       141 G~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e---~~~~e~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~LV~e  215 (566)
T PLN03225        141 GEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE---IWMNER--VRRACPNSCADFVYGFLEPVSSKKEDEYWLVWR  215 (566)
T ss_pred             eeCCCeEEEEEEEcCCccccCcEEEEEEecccchhH---HHHHHH--HHhhchhhHHHHHHhhhcccccccCCceEEEEE
Confidence            5567889999999888    9999999976432221   111111  111111111111111      235667899999


Q ss_pred             eCCCCCHHHHHHhhccCCC--C---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCce
Q psy2674          72 YTDWGDLKQFLLATRKDSK--D---KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSV  145 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~  145 (183)
                      |+++++|.+++........  .   ......+.........+..++.|++.+|.|||+++|+||||||+|||++. ++.+
T Consensus       216 y~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~  295 (566)
T PLN03225        216 YEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSF  295 (566)
T ss_pred             ecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcE
Confidence            9999999998865421000  0   00000001111233456788999999999999999999999999999985 6899


Q ss_pred             EEecccCCCCCC------cccccceeeeeecccCC
Q psy2674         146 KISLSGLSKDTY------QKEYYKYRWVICSNIAE  174 (183)
Q Consensus       146 ki~dfg~a~~~~------~~~~~~~~~~~~pe~~~  174 (183)
                      ||+|||+|....      .....+++.|+|||.+.
T Consensus       296 KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~  330 (566)
T PLN03225        296 KIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYI  330 (566)
T ss_pred             EEEeCCCccccccccccCCcccccCCCccChHHhh
Confidence            999999997543      23566788999999653

>PRK10345 hypothetical protein; Provisional

Probab=99.83  E-value=1.2e-19  Score=128.31  Aligned_cols=132  Identities=17%  Similarity=0.217  Sum_probs=99.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-----CCcceeeEEeEEecCC---c-cEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-----DHAHVVKMIGICRDGD---P-HYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~h~~i~~~~~~~~~~~---~-~~lv~e~   72 (183)
                      |.-+.+.||.  +..++.. ++|++...... ..+.+.+|+..++.+     .||||++++++++++.   . +.+++||
T Consensus        11 G~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~-~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~   86 (210)
T PRK10345         11 GTGRHRKCYA--HPEDAQR-CIKIVYHRGDG-GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADF   86 (210)
T ss_pred             cCCCceEEEE--CCCCcCe-EEEEEeccccc-hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecC
Confidence            4556778884  5566666 68887654332 345789999999999     5799999999998763   3 3378999


Q ss_pred             --CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHhcCCceecccccceeEecc----CCce
Q psy2674          73 --TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGL-EHISDKRLIHKDIAARNCLISS----DLSV  145 (183)
Q Consensus        73 --~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l-~~lh~~~ivH~di~~~nil~~~----~~~~  145 (183)
                        +.+++|.+++...                .+++.  ..++.+++.++ +|||+++|+||||||.||+++.    +..+
T Consensus        87 ~G~~~~tL~~~l~~~----------------~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~  148 (210)
T PRK10345         87 DGKPSITLTEFAEQC----------------RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIP  148 (210)
T ss_pred             CCCcchhHHHHHHcc----------------cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcE
Confidence              4479999999653                24444  35678888887 9999999999999999999973    3479


Q ss_pred             EEec-ccCCCC
Q psy2674         146 KISL-SGLSKD  155 (183)
Q Consensus       146 ki~d-fg~a~~  155 (183)
                      +|+| ||.+..
T Consensus       149 ~LiDg~G~~~~  159 (210)
T PRK10345        149 VVCDNIGESTF  159 (210)
T ss_pred             EEEECCCCcce
Confidence            9999 555443

>KOG1163|consensus

Probab=99.80  E-value=4.5e-19  Score=124.49  Aligned_cols=138  Identities=13%  Similarity=0.111  Sum_probs=118.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++..|.+....+|.+||+|+-.+.....   ++..|..+++.++ -..|..+..+..+...-.+||+.+. ++|++
T Consensus        24 GsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp---qL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLLG-PsLEd   99 (341)
T KOG1163|consen   24 GSGSFGDIYLGISITSGEEVAIKLESSKAKHP---QLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLLG-PSLED   99 (341)
T ss_pred             cCCchhheeeeeeccCCceEEEEeecccCCCc---chhHHHHHHHHhccCCCCchhhhhccccccceeeeeccC-ccHHH
Confidence            56678889999999999999999977544332   6778999999995 5677778888888888899999885 99999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec---cCCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~---~~~~~ki~dfg~a~~~~  157 (183)
                      +..-+.+              .++..+++..+-|++.-++|+|..+++||||||+|+|..   ....+.++|||+|+...
T Consensus       100 LfnfC~R--------------~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~  165 (341)
T KOG1163|consen  100 LFNFCSR--------------RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYR  165 (341)
T ss_pred             HHHHHhh--------------hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhc
Confidence            9887765              689999999999999999999999999999999999985   45779999999998554

>smart00090 RIO RIO-like kinase

Probab=99.79  E-value=9.9e-19  Score=126.29  Aligned_cols=137  Identities=17%  Similarity=0.057  Sum_probs=102.8

Q ss_pred             CCCCCceeeecc-CCCCcceEEEeeccCCCC---------------------H--HHHHHHHHHHHHHhcCCCc--ceee
Q psy2674           2 SLIPNARGLKAS-DPQDTSVLMAKSLVHSKD---------------------D--EALHEFKREIDLFCKLDHA--HVVK   55 (183)
Q Consensus         2 ~~~~~~~~~~~~-~~~~~~~vavK~~~~~~~---------------------~--~~~~~~~~E~~~l~~l~h~--~i~~   55 (183)
                      |.-..+.||+|. +..+|+.||+|.+.....                     .  .....+.+|++.+..+.+.  .+.+
T Consensus        37 g~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~~p~  116 (237)
T smart00090       37 STGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVPVPK  116 (237)
T ss_pred             ccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCe
Confidence            456778899998 778999999999874321                     0  0123457899999999643  2334


Q ss_pred             EEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-ceeccccc
Q psy2674          56 MIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-LIHKDIAA  134 (183)
Q Consensus        56 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-ivH~di~~  134 (183)
                      +++.    ...+++|||+++.+|........               .........++.|++.++.+||+.| ++|+|++|
T Consensus       117 ~~~~----~~~~lV~E~~~g~~L~~~~~~~~---------------~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp  177 (237)
T smart00090      117 PIAW----RRNVLVMEFIGGDGLPAPRLKDV---------------EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSE  177 (237)
T ss_pred             eeEe----cCceEEEEEecCCcccccccccC---------------CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCCh
Confidence            4432    23589999999877765442211               3455667889999999999999999 99999999


Q ss_pred             ceeEeccCCceEEecccCCCCCCc
Q psy2674         135 RNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       135 ~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      +||+++ ++.++++|||.+.....
T Consensus       178 ~NIli~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      178 YNILVH-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             hhEEEE-CCCEEEEEChhhhccCC
Confidence            999998 88999999999885444

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.79  E-value=2.6e-18  Score=122.38  Aligned_cols=130  Identities=12%  Similarity=0.132  Sum_probs=100.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHH------HHHHHHHHhcCCCcceeeEEeEEecC--------Cc
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHE------FKREIDLFCKLDHAHVVKMIGICRDG--------DP   65 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~------~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~   65 (183)
                      |-..+++|+.+..  ++..+|+|++.+..  .+...+.      +.+|++.+..+.|++|..+.+++...        +.
T Consensus        40 ~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~  117 (232)
T PRK10359         40 RNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHT  117 (232)
T ss_pred             cCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecccccccccCC
Confidence            3445677887544  46689999997432  3333233      57899999999999999998886643        35


Q ss_pred             cEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCce
Q psy2674          66 HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV  145 (183)
Q Consensus        66 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~  145 (183)
                      .+++|||++|.+|.+...                   +++.    ...+++.++..+|+.|++|+|++|+||++++++ +
T Consensus       118 ~~lvmEyi~G~tL~~~~~-------------------~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i  173 (232)
T PRK10359        118 YIMLIEYIEGVELNDMPE-------------------ISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-L  173 (232)
T ss_pred             eEEEEEEECCccHHHhhh-------------------ccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-E
Confidence            789999999999977631                   3332    345899999999999999999999999999888 9


Q ss_pred             EEecccCCCCCC
Q psy2674         146 KISLSGLSKDTY  157 (183)
Q Consensus       146 ki~dfg~a~~~~  157 (183)
                      +++|||..+...
T Consensus       174 ~liDfg~~~~~~  185 (232)
T PRK10359        174 RIIDLSGKRCTA  185 (232)
T ss_pred             EEEECCCccccc
Confidence            999999887553

>KOG1167|consensus

Probab=99.78  E-value=5.1e-19  Score=132.09  Aligned_cols=132  Identities=18%  Similarity=0.288  Sum_probs=114.5

Q ss_pred             CCCCCceeeeccCCC---CcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQ---DTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |...++.||++.+..   ..+.||+|.+.....+.   ++.+|++++..+ .+.||+.+.+.+...+...+++||++..+
T Consensus        45 geGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~---ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~  121 (418)
T KOG1167|consen   45 GEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPS---RILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDR  121 (418)
T ss_pred             cccchhhhhhhhHhhhccccceEeeeecccccCch---HHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccC
Confidence            344555566666656   88999999998555554   789999999999 79999999999999999999999999888


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-cCCceEEecccCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSVKISLSGLSK  154 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-~~~~~ki~dfg~a~  154 (183)
                      ..++..                  .++...+..+++.++.+|.++|.+||+||||||+|++++ ..++-.|+|||+|.
T Consensus       122 f~~l~~------------------~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  122 FRDLYR------------------SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             HHHHHh------------------cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHH
Confidence            888875                  466788999999999999999999999999999999997 56889999999986

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.78  E-value=1.2e-19  Score=151.42  Aligned_cols=116  Identities=20%  Similarity=0.228  Sum_probs=87.2

Q ss_pred             CCC-cceeeEEeEE-------ecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy2674          48 LDH-AHVVKMIGIC-------RDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGL  119 (183)
Q Consensus        48 l~h-~~i~~~~~~~-------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  119 (183)
                      +.| .||.++.++|       .+...+++++|+++ ++|.+.+....              ..+++..++.++.||+.||
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~--------------~~~~~~~~~~i~~qi~~al   93 (793)
T PLN00181         29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECED-VSLRQWLDNPD--------------RSVDAFECFHVFRQIVEIV   93 (793)
T ss_pred             hhHHHHHHHhhcccCCccccccccchhhhhhccCC-ccHHHHHhccc--------------ccccHHHHHHHHHHHHHHH
Confidence            344 4666677766       22345778889875 79999996432              2588999999999999999


Q ss_pred             HHHhcCCceecccccceeEecc-------------------CCceEEecccCCCCCCc---------------------c
Q psy2674         120 EHISDKRLIHKDIAARNCLISS-------------------DLSVKISLSGLSKDTYQ---------------------K  159 (183)
Q Consensus       120 ~~lh~~~ivH~di~~~nil~~~-------------------~~~~ki~dfg~a~~~~~---------------------~  159 (183)
                      .|||++||+||||||+|||++.                   ++.+|++|||+++....                     .
T Consensus        94 ~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (793)
T PLN00181         94 NAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQI  173 (793)
T ss_pred             HHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccccc
Confidence            9999999999999999999954                   44566777777653210                     0


Q ss_pred             cccceeeeeecccCCCccc
Q psy2674         160 EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...+|++|+|||++.+.+|
T Consensus       174 ~~~gt~~Y~APE~~~~~~~  192 (793)
T PLN00181        174 LAMEMSWYTSPEEDNGSSS  192 (793)
T ss_pred             ccCCCcceEChhhhccCCC
Confidence            1346889999999988766

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=8.3e-18  Score=117.73  Aligned_cols=126  Identities=15%  Similarity=0.056  Sum_probs=96.0

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCCC---HHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSKD---DEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      .+++|+.+..  ++.+++.+.+.....   .-+...+.+|+++++.+ .++++.+++++    +..+++|||+.|.+|.+
T Consensus        14 ~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~   87 (218)
T PRK12274         14 TFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQ   87 (218)
T ss_pred             CcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHh
Confidence            4566764433  788888887763322   11233578999999999 56888888886    34699999999888865


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceeccc-ccceeEeccCCceEEecccCCCCCCc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI-AARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di-~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ....                   .   ...++.|++.++.++|++|++|||| ||.|||++.++.++|+|||+|.....
T Consensus        88 ~~~~-------------------~---~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~  144 (218)
T PRK12274         88 RPPR-------------------G---DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNP  144 (218)
T ss_pred             hhhh-------------------h---hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCC
Confidence            3311                   1   1346788999999999999999999 79999999999999999999985443

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=8.3e-18  Score=119.65  Aligned_cols=134  Identities=13%  Similarity=0.122  Sum_probs=107.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CH-----HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DD-----EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |--..|.||++..  .+..+++|+.....  ..     .....+.+|+..+..+.++++.....++.+.+..+++|||++
T Consensus         5 ~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   82 (211)
T PRK14879          5 KRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIE   82 (211)
T ss_pred             ccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeC
Confidence            4456788898866  67788999865322  11     122467789999999999888777777777788899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      |++|.+.+...                  .. ....++.+++.++.++|+.+++|+|++|.||+++ ++.++++|||.+.
T Consensus        83 G~~L~~~~~~~------------------~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~  142 (211)
T PRK14879         83 GEPLKDLINSN------------------GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAE  142 (211)
T ss_pred             CcCHHHHHHhc------------------cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCccc
Confidence            99999988532                  11 7778899999999999999999999999999998 7889999999988


Q ss_pred             CCC
Q psy2674         155 DTY  157 (183)
Q Consensus       155 ~~~  157 (183)
                      ...
T Consensus       143 ~~~  145 (211)
T PRK14879        143 FSK  145 (211)
T ss_pred             CCC
Confidence            544

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.77  E-value=3.2e-18  Score=120.73  Aligned_cols=132  Identities=15%  Similarity=0.108  Sum_probs=102.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CH-----HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DD-----EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |--..+.||++.  .++..+++|......  ..     ....++.+|++++..+.++++.....++.+++..+++|||++
T Consensus         3 g~G~~~~vy~~~--~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~   80 (199)
T TIGR03724         3 AKGAEAIIYLGD--FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE   80 (199)
T ss_pred             CCCceEEEEEee--cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence            445678888886  467889999865321  11     123567789999999987765554445556677899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      |++|.+.+....                .      .++.+++.++.++|+.+++|+|++|.||+++ ++.++++|||++.
T Consensus        81 g~~l~~~~~~~~----------------~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~  137 (199)
T TIGR03724        81 GKPLKDVIEEGN----------------D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGK  137 (199)
T ss_pred             CccHHHHHhhcH----------------H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCc
Confidence            999988774321                1      6788999999999999999999999999998 8899999999988


Q ss_pred             CCCc
Q psy2674         155 DTYQ  158 (183)
Q Consensus       155 ~~~~  158 (183)
                      ....
T Consensus       138 ~~~~  141 (199)
T TIGR03724       138 YSDE  141 (199)
T ss_pred             CCCc
Confidence            6543

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG1164|consensus

Probab=99.74  E-value=3.1e-17  Score=123.90  Aligned_cols=159  Identities=17%  Similarity=0.176  Sum_probs=122.7

Q ss_pred             CCCCCceeeeccCCCCc-ceEEEeeccCCCCHHHHHHHHHHHHHHhcCC----CcceeeEEeEE-ecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKLD----HAHVVKMIGIC-RDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~----h~~i~~~~~~~-~~~~~~~lv~e~~~~   75 (183)
                      |--.++.+|.+.+..++ ..+|+|........... .+..|+.++..+.    ..++..+++.. ..+...++||+.+. 
T Consensus        27 G~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~G-  104 (322)
T KOG1164|consen   27 GEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLLG-  104 (322)
T ss_pred             cccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEeccC-
Confidence            44567888888887775 78888887644322211 5677888888875    36888888888 47778899999875 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC-----CceEEecc
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-----LSVKISLS  150 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~-----~~~ki~df  150 (183)
                      .+|.++......             ..++..++..++.|++.+|+++|+.|++||||||.|+++...     ..+.+.||
T Consensus       105 ~sL~dl~~~~~~-------------~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf  171 (322)
T KOG1164|consen  105 PSLEDLRKRNPP-------------GRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDF  171 (322)
T ss_pred             ccHHHHHHhCCC-------------CCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence            999998876641             368999999999999999999999999999999999999754     56999999


Q ss_pred             cCCC--CCC---------c----ccccceeeeeecccCCC
Q psy2674         151 GLSK--DTY---------Q----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       151 g~a~--~~~---------~----~~~~~~~~~~~pe~~~~  175 (183)
                      |+|+  ...         .    ....||..|++++.-.|
T Consensus       172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~  211 (322)
T KOG1164|consen  172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG  211 (322)
T ss_pred             CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC
Confidence            9998  311         1    12337788888876554

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.74  E-value=9.2e-17  Score=119.86  Aligned_cols=156  Identities=27%  Similarity=0.376  Sum_probs=128.2

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCCCHH--HHHHHHHHHHHHhcCCCc-ceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSKDDE--ALHEFKREIDLFCKLDHA-HVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~h~-~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      .++.++.+.+.   ..+++|.+.......  ....+.+|+..++.+.|+ +++.+.+.+......+++++++.++++.+.
T Consensus        12 ~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~   88 (384)
T COG0515          12 SFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDL   88 (384)
T ss_pred             CCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHH
Confidence            34677777766   888899987444332  466889999999999877 799999999777778999999999999966


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-ceEEecccCCCCCC---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SVKISLSGLSKDTY---  157 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-~~ki~dfg~a~~~~---  157 (183)
                      +......            ..+.......+..|++.++.++|..+++|||+||.||+++... .++++|||.+....   
T Consensus        89 ~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~  156 (384)
T COG0515          89 LKKIGRK------------GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG  156 (384)
T ss_pred             HHhcccc------------cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence            6554310            1488899999999999999999999999999999999999888 79999999987332   


Q ss_pred             --------cccccceeeeeecccCCC
Q psy2674         158 --------QKEYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 --------~~~~~~~~~~~~pe~~~~  175 (183)
                              .....++.+|++||...+
T Consensus       157 ~~~~~~~~~~~~~~t~~~~~pe~~~~  182 (384)
T COG0515         157 STSSIPALPSTSVGTPGYMAPEVLLG  182 (384)
T ss_pred             ccccccccccccccccccCCHHHhcC
Confidence                    245567899999999877

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.73  E-value=4.5e-17  Score=130.61  Aligned_cols=133  Identities=17%  Similarity=0.131  Sum_probs=101.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-----HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-----DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--.++.||++........+.++.......     ....+++.+|+++++.++|+++.....++.++...+++|||++++
T Consensus       342 G~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~  421 (535)
T PRK09605        342 GKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGK  421 (535)
T ss_pred             ccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCC
Confidence            445678888866544332222222221111     122356889999999999999988777777777889999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+.+.                       ....++.+++.++.+||+.+++|||+||+||++ .++.++++|||+++..
T Consensus       422 ~L~~~l~-----------------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        422 DLKDVLE-----------------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             cHHHHHH-----------------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            9988774                       235678899999999999999999999999999 6789999999999865


Q ss_pred             Cc
Q psy2674         157 YQ  158 (183)
Q Consensus       157 ~~  158 (183)
                      ..
T Consensus       478 ~~  479 (535)
T PRK09605        478 DL  479 (535)
T ss_pred             Cc
Confidence            43

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.72  E-value=1.1e-16  Score=112.91  Aligned_cols=131  Identities=18%  Similarity=0.126  Sum_probs=97.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH---------------------HHHHHHHHHHHHHhcCCCcc--eeeEEe
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD---------------------EALHEFKREIDLFCKLDHAH--VVKMIG   58 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~h~~--i~~~~~   58 (183)
                      |.-.++.||++... +|+.+|+|++......                     .......+|...+..+.+++  +...++
T Consensus        24 ~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~~~~  102 (198)
T cd05144          24 GVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPKPID  102 (198)
T ss_pred             ccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCceee
Confidence            44567889988764 7999999987633210                     01123567888888887663  444433


Q ss_pred             EEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeE
Q psy2674          59 ICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL  138 (183)
Q Consensus        59 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil  138 (183)
                          .+..+++|||++|++|.....                     ......++.+++.++.++|+.|++|+||+|.||+
T Consensus       103 ----~~~~~lv~e~~~g~~L~~~~~---------------------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nil  157 (198)
T cd05144         103 ----WNRHAVVMEYIDGVELYRVRV---------------------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNIL  157 (198)
T ss_pred             ----cCCceEEEEEeCCcchhhccc---------------------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEE
Confidence                245689999999988865431                     0234567789999999999999999999999999


Q ss_pred             eccCCceEEecccCCCCCCc
Q psy2674         139 ISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       139 ~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ++.++.++++|||.+.....
T Consensus       158 l~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         158 VDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             EcCCCcEEEEECCccccCCC
Confidence            99999999999999975443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1024|consensus

Probab=99.71  E-value=3.1e-17  Score=122.35  Aligned_cols=157  Identities=28%  Similarity=0.428  Sum_probs=128.5

Q ss_pred             CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEe-cCCccEEEEeeCCCCCHHHHHHhhccCCCCCC
Q psy2674          15 PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICR-DGDPHYLLLEYTDWGDLKQFLLATRKDSKDKS   93 (183)
Q Consensus        15 ~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~   93 (183)
                      -.+.+.|.+|.++....+-+...+..|.-++....|||++.+.+++. +.+..++++.+...|+|..++........   
T Consensus       311 ~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~---  387 (563)
T KOG1024|consen  311 YNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDP---  387 (563)
T ss_pred             cchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCC---
Confidence            34677888999888888888889999999999999999999999875 45678889999999999999986542111   


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccccc--c-----eee
Q psy2674          94 GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY--K-----YRW  166 (183)
Q Consensus        94 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~~--~-----~~~  166 (183)
                          ...+.++..+.+.++.|+..|++++|+.+++|.||..+|++|++.-.+|++|=.+++...+.+|.  |     ..-
T Consensus       388 ----~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvk  463 (563)
T KOG1024|consen  388 ----SYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVK  463 (563)
T ss_pred             ----ccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCccc
Confidence                12235777888999999999999999999999999999999999999999999999987765542  2     345


Q ss_pred             eeecccCCCccc
Q psy2674         167 VICSNIAEGRRL  178 (183)
Q Consensus       167 ~~~pe~~~~~~~  178 (183)
                      ||+||.+.++-|
T Consensus       464 WMslEal~n~~y  475 (563)
T KOG1024|consen  464 WMSLEALQNSHY  475 (563)
T ss_pred             ccCHHHHhhhhh
Confidence            678888776544

>KOG1165|consensus

Probab=99.70  E-value=3.5e-16  Score=114.57  Aligned_cols=156  Identities=15%  Similarity=0.155  Sum_probs=125.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++..+.....-++++||+|.-....+.-   ++..|...++.+ ..++|..++-+...+-+-.+|+|.+. .+|++
T Consensus        37 GeGsFG~lf~G~Nl~nne~VAIKfEPrkS~AP---QLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLLG-PSLED  112 (449)
T KOG1165|consen   37 GEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAP---QLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLLG-PSLED  112 (449)
T ss_pred             ccCcceeeecccccccCceEEEEeccccCCcc---hHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhhC-cCHHH
Confidence            45566777777888899999999976333322   577788888888 68999988877777777789999885 99999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-----cCCceEEecccCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-----SDLSVKISLSGLSKD  155 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-----~~~~~ki~dfg~a~~  155 (183)
                      +..-+++              .++..+++.++.|++.-++++|++.+|.|||||+|+||.     ..+.+.++|||+|+.
T Consensus       113 LFD~CgR--------------~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~  178 (449)
T KOG1165|consen  113 LFDLCGR--------------RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE  178 (449)
T ss_pred             HHHHhcC--------------cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence            9998876              799999999999999999999999999999999999995     346799999999985


Q ss_pred             CCcc------------cccceeeeeecccCCC
Q psy2674         156 TYQK------------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       156 ~~~~------------~~~~~~~~~~pe~~~~  175 (183)
                      +-+.            ...||..||+-.-=.|
T Consensus       179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG  210 (449)
T KOG1165|consen  179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLG  210 (449)
T ss_pred             hcCccccccCccccccccccceeeeEeecccc
Confidence            4331            3456778887554333

>KOG0590|consensus

Probab=99.70  E-value=7.8e-18  Score=135.46  Aligned_cols=128  Identities=17%  Similarity=0.235  Sum_probs=105.8

Q ss_pred             HHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy2674          38 FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVAL  117 (183)
Q Consensus        38 ~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  117 (183)
                      +..|.-+-..+.|+|++.....+.+.....-.||||++ +|..++.+.+               .+....+-.++.|++.
T Consensus       368 i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~---------------~~~~~e~~c~fKqL~~  431 (601)
T KOG0590|consen  368 ITSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNG---------------KLTPLEADCFFKQLLR  431 (601)
T ss_pred             hhhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhccc---------------ccchhhhhHHHHHHHH
Confidence            44555556677899988777666665555555999997 9999998764               3778888999999999


Q ss_pred             HHHHHhcCCceecccccceeEeccCCceEEecccCCCCC---------CcccccceeeeeecccCCCcccccc
Q psy2674         118 GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT---------YQKEYYKYRWVICSNIAEGRRLNVF  181 (183)
Q Consensus       118 ~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~---------~~~~~~~~~~~~~pe~~~~~~~~~~  181 (183)
                      |++|+|+.|+.|||+|++|+++..++.+||+|||.+...         ...+.++...|.|||++.+..|||.
T Consensus       432 Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr  504 (601)
T KOG0590|consen  432 GVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPR  504 (601)
T ss_pred             HHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcc
Confidence            999999999999999999999999999999999998733         2245678889999999999998863

>KOG1166|consensus

Probab=99.70  E-value=2.7e-17  Score=135.97  Aligned_cols=157  Identities=16%  Similarity=0.192  Sum_probs=119.6

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCC---CcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLD---HAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      +|-.+.|.||+|.+.. |+.||+|+-... .+.     |..-.+++..++   -+.|+.+......++..++++||.+.|
T Consensus       706 ~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE-----fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~G  779 (974)
T KOG1166|consen  706 IGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE-----FYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYG  779 (974)
T ss_pred             eccccceEEEEeecCC-CcEEEEEeecCCCcee-----eeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccccc
Confidence            3667889999999988 999999997633 221     111122222222   233444445555577889999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-------cCCceEEec
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-------SDLSVKISL  149 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-------~~~~~ki~d  149 (183)
                      +|.+++...               ..+++..+..+..|++..|+.||..+|||+||||+|+|+.       ....++|+|
T Consensus       780 tlld~~N~~---------------~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lID  844 (974)
T KOG1166|consen  780 TLLDLINTN---------------KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLID  844 (974)
T ss_pred             cHHHhhccC---------------CCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEe
Confidence            999999743               2589999999999999999999999999999999999993       356799999


Q ss_pred             ccCCCCCCc---c----cccceeeeeecccCCCccc
Q psy2674         150 SGLSKDTYQ---K----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       150 fg~a~~~~~---~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      ||-|..+..   .    ..+.|..+-++|+..|+++
T Consensus       845 fG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpW  880 (974)
T KOG1166|consen  845 FGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPW  880 (974)
T ss_pred             cccceeeeEcCCCcEEeeeeccccchhHHHhcCCCC
Confidence            999975432   2    3455888999999999876

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.69  E-value=5.4e-16  Score=112.28  Aligned_cols=120  Identities=17%  Similarity=0.089  Sum_probs=90.1

Q ss_pred             cceEEEeeccCCC------------CHHHHHHHHHHHHHHhcCCCcce--eeEEeEEecCC-c---cEEEEeeCCC-CCH
Q psy2674          18 TSVLMAKSLVHSK------------DDEALHEFKREIDLFCKLDHAHV--VKMIGICRDGD-P---HYLLLEYTDW-GDL   78 (183)
Q Consensus        18 ~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~h~~i--~~~~~~~~~~~-~---~~lv~e~~~~-~~L   78 (183)
                      +..+++|......            ......++.+|++++..++|+++  ...+++..... .   .++++|+++| .+|
T Consensus        55 ~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L  134 (239)
T PRK01723         55 GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDL  134 (239)
T ss_pred             CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCH
Confidence            6788888774211            11234567899999999988774  56666644322 2   2599999997 688


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      .+++...                .+++..    +.+++.++.+||++|++|+||+|.|||++.++.++|+|||.+....
T Consensus       135 ~~~l~~~----------------~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~~~  193 (239)
T PRK01723        135 VALLQEA----------------PLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGELRT  193 (239)
T ss_pred             HHHHhcC----------------CCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcccCC
Confidence            8887532                244433    5678999999999999999999999999988899999999998654

>KOG1290|consensus

Probab=99.67  E-value=6.2e-16  Score=117.95  Aligned_cols=123  Identities=19%  Similarity=0.232  Sum_probs=103.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-----C---cceeeEEeEEecC----CccEEE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-----H---AHVVKMIGICRDG----DPHYLL   69 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~~i~~~~~~~~~~----~~~~lv   69 (183)
                      |--.+++|+.|.+....+-||+|+.+..  +...+....||.+|++++     +   ..||++++.|...    .++++|
T Consensus        87 GWGHFSTVWLawDtq~~r~VAlKVvKSA--qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMV  164 (590)
T KOG1290|consen   87 GWGHFSTVWLAWDTQNKRYVALKVVKSA--QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMV  164 (590)
T ss_pred             cccccceeEEEeeccCCeEEEEEEEehh--hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEE
Confidence            4456788999999999999999997633  344567788999999883     2   3699999999763    468999


Q ss_pred             EeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEec
Q psy2674          70 LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLIS  140 (183)
Q Consensus        70 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~  140 (183)
                      +|++. .+|...+.....             ++++...+..|+.||+.||.|||.. ||||-||||.|||+-
T Consensus       165 fEvLG-dnLLklI~~s~Y-------------rGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  165 FEVLG-DNLLKLIKYSNY-------------RGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             ehhhh-hHHHHHHHHhCC-------------CCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            99986 888888877633             5799999999999999999999975 999999999999983

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.64  E-value=2.7e-15  Score=104.76  Aligned_cols=134  Identities=18%  Similarity=0.123  Sum_probs=91.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHH----------------------HHHHHHHHhcCCCcc--eeeE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHE----------------------FKREIDLFCKLDHAH--VVKM   56 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~----------------------~~~E~~~l~~l~h~~--i~~~   56 (183)
                      |.-.++.+|.+.+. ++++||+|++..... ......                      ...|.+.+..+.+..  +.+.
T Consensus         6 g~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~   84 (187)
T cd05119           6 GTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVPKP   84 (187)
T ss_pred             ccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCCce
Confidence            45678889999877 899999999764321 111111                      134555555553322  3333


Q ss_pred             EeEEecCCccEEEEeeCCCCCHHH-HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceeccccc
Q psy2674          57 IGICRDGDPHYLLLEYTDWGDLKQ-FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAA  134 (183)
Q Consensus        57 ~~~~~~~~~~~lv~e~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~  134 (183)
                      ++.    ...++++||++++++.. .+...                 ........++.+++.++.++|. .+++|+|++|
T Consensus        85 ~~~----~~~~lv~e~~~g~~~~~~~l~~~-----------------~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p  143 (187)
T cd05119          85 IDL----NRHVLVMEFIGGDGIPAPRLKDV-----------------RLLEDPEELYDQILELMRKLYREAGLVHGDLSE  143 (187)
T ss_pred             Eec----CCCEEEEEEeCCCCccChhhhhh-----------------hhcccHHHHHHHHHHHHHHHhhccCcCcCCCCh
Confidence            332    34689999999754321 11111                 0015577889999999999999 9999999999


Q ss_pred             ceeEeccCCceEEecccCCCCCCc
Q psy2674         135 RNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       135 ~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      +||+++ ++.++++|||.+.....
T Consensus       144 ~Nili~-~~~~~liDfg~a~~~~~  166 (187)
T cd05119         144 YNILVD-DGKVYIIDVPQAVEIDH  166 (187)
T ss_pred             hhEEEE-CCcEEEEECcccccccC
Confidence            999999 89999999999975443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.62  E-value=1.2e-14  Score=97.47  Aligned_cols=128  Identities=18%  Similarity=0.118  Sum_probs=101.3

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCC--cceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDH--AHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      ...+.+|++....  ..+++|.......   ...+.+|+..++.+++  .++.+++.....++..++++||+++.++...
T Consensus         9 g~~~~v~~~~~~~--~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~   83 (155)
T cd05120           9 GLTNRVYLLGTKD--EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV   83 (155)
T ss_pred             ccccceEEEEecC--CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC
Confidence            3456677776544  7889999865433   3468889999999965  5888888888888889999999987666542


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---CceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK---RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                                            +......+..+++.++..+|..   +++|+|++|.||+++..+.++++||+.+.....
T Consensus        84 ----------------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~~~  141 (155)
T cd05120          84 ----------------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYGPP  141 (155)
T ss_pred             ----------------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCCCh
Confidence                                  2345566788899999999985   699999999999999889999999999985443

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.49  E-value=9e-14  Score=96.01  Aligned_cols=82  Identities=13%  Similarity=0.184  Sum_probs=71.5

Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      |+|.+++...+.              .+++..++.++.|++.|+.|||+++      ||.||+++.++.+++  ||++..
T Consensus         1 GsL~~~l~~~~~--------------~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~   58 (176)
T smart00750        1 VSLADILEVRGR--------------PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAF   58 (176)
T ss_pred             CcHHHHHHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEe
Confidence            678888876432              5899999999999999999999998      999999999999999  999987


Q ss_pred             CCcccccceeeeeecccCCCcccc
Q psy2674         156 TYQKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       156 ~~~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .......+++.|+|||++.+.+|+
T Consensus        59 ~~~~~~~g~~~y~aPE~~~~~~~~   82 (176)
T smart00750       59 KTPEQSRVDPYFMAPEVIQGQSYT   82 (176)
T ss_pred             eccccCCCcccccChHHhcCCCCc
Confidence            666666789999999999887764

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.48  E-value=3.4e-13  Score=105.51  Aligned_cols=139  Identities=16%  Similarity=0.115  Sum_probs=91.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHH---------------------------------HH------HHHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEA---------------------------------LH------EFKREI   42 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~---------------------------------~~------~~~~E~   42 (183)
                      |....|.||+|+. .+|+.||||+..+.-...-                                 ..      .+.+|+
T Consensus       126 asaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~Ea  204 (437)
T TIGR01982       126 AAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRREA  204 (437)
T ss_pred             eeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHHHH
Confidence            4456788999875 4789999999864421100                                 00      133344


Q ss_pred             HHHhcC----CCcceeeEEeEEe-cCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy2674          43 DLFCKL----DHAHVVKMIGICR-DGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVAL  117 (183)
Q Consensus        43 ~~l~~l----~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  117 (183)
                      ..+..+    ++.+-+.+-..+. ..+..+++|||++|.+|.+.......              ...   ...++.+++.
T Consensus       205 ~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--------------~~~---~~~ia~~~~~  267 (437)
T TIGR01982       205 ANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--------------GLD---RKALAENLAR  267 (437)
T ss_pred             HHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--------------CCC---HHHHHHHHHH
Confidence            444443    2333344434432 24567999999999999887653211              121   2233444444


Q ss_pred             -HHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674         118 -GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       118 -~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                       .+..+|..|++|+|++|.||+++.++.++++|||++.....
T Consensus       268 ~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~  309 (437)
T TIGR01982       268 SFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE  309 (437)
T ss_pred             HHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence             46778999999999999999999999999999999986654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.46  E-value=1.5e-12  Score=90.97  Aligned_cols=135  Identities=16%  Similarity=0.149  Sum_probs=93.8

Q ss_pred             CCCCCceeeeccCCC------CcceEEEeeccCCC------------C---------HHHHHHHH----HHHHHHhcCCC
Q psy2674           2 SLIPNARGLKASDPQ------DTSVLMAKSLVHSK------------D---------DEALHEFK----REIDLFCKLDH   50 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~------~~~~vavK~~~~~~------------~---------~~~~~~~~----~E~~~l~~l~h   50 (183)
                      |.--+|.||.+....      ++..+|+|+.....            +         ...+..+.    +|...|+.+..
T Consensus         6 ~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl~~   85 (197)
T cd05146           6 STGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRMQK   85 (197)
T ss_pred             ccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence            455678899887654      46899999975311            0         11122333    79998888743


Q ss_pred             --cceeeEEeEEecCCccEEEEeeCCCCCHH-HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-hcCC
Q psy2674          51 --AHVVKMIGICRDGDPHYLLLEYTDWGDLK-QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKR  126 (183)
Q Consensus        51 --~~i~~~~~~~~~~~~~~lv~e~~~~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l-h~~~  126 (183)
                        .++...+++    ...+++|||+++..+. ..+...                .++......+..+++.++..+ |+.|
T Consensus        86 ~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~----------------~~~~~~~~~i~~~i~~~l~~l~H~~g  145 (197)
T cd05146          86 AGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA----------------KLNDEEMKNAYYQVLSMMKQLYKECN  145 (197)
T ss_pred             cCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc----------------ccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence              344455544    4568999999854332 112111                244556667788999999998 8999


Q ss_pred             ceecccccceeEeccCCceEEecccCCCCCC
Q psy2674         127 LIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus       127 ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      ++|+|+++.||++. ++.+.|+|||.|....
T Consensus       146 lVHGDLs~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         146 LVHADLSEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             eecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence            99999999999996 4679999999997554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.45  E-value=1.2e-13  Score=109.66  Aligned_cols=141  Identities=13%  Similarity=0.049  Sum_probs=90.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH---------------------------------HHHHHH------HHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD---------------------------------EALHEF------KREI   42 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~---------------------------------~~~~~~------~~E~   42 (183)
                      |....|.|++|+...+|+.||||++.+.-..                                 +..+.+      .+|+
T Consensus       128 asaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~~Ea  207 (537)
T PRK04750        128 ASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLMREA  207 (537)
T ss_pred             cCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHHHHH
Confidence            5567889999998888999999999744210                                 111122      3344


Q ss_pred             HHHhcC----CCcceeeEEeEEec-CCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy2674          43 DLFCKL----DHAHVVKMIGICRD-GDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVAL  117 (183)
Q Consensus        43 ~~l~~l----~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  117 (183)
                      ..+..+    .+...+.+-.++.+ .+..+++|||++|+++.+.-..... +        .....+.+..+..++.|+  
T Consensus       208 ~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~-g--------~d~~~la~~~v~~~~~Qi--  276 (537)
T PRK04750        208 ANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA-G--------TDMKLLAERGVEVFFTQV--  276 (537)
T ss_pred             HHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc-C--------CCHHHHHHHHHHHHHHHH--
Confidence            333333    23444444444433 4567899999999999874321111 0        000013333444444444  


Q ss_pred             HHHHHhcCCceecccccceeEeccCC----ceEEecccCCCCCCc
Q psy2674         118 GLEHISDKRLIHKDIAARNCLISSDL----SVKISLSGLSKDTYQ  158 (183)
Q Consensus       118 ~l~~lh~~~ivH~di~~~nil~~~~~----~~ki~dfg~a~~~~~  158 (183)
                           ...|++|+|++|.||+++.++    .+.+.|||++.....
T Consensus       277 -----f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 -----FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             -----HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence                 468999999999999999887    999999999886654

>KOG3087|consensus

Probab=99.43  E-value=5.9e-12  Score=85.81  Aligned_cols=149  Identities=19%  Similarity=0.190  Sum_probs=105.8

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCC--CHH-----HHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCC-C
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSK--DDE-----ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW-G   76 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~--~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~   76 (183)
                      +.|+++++  .-+|+.+.+|.-..++  .+.     .+.+..+|+..+.++.--.|.--.-++.+...-.+.|||++| .
T Consensus        19 AEArv~~~--~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~   96 (229)
T KOG3087|consen   19 AEARVPRG--SFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGAS   96 (229)
T ss_pred             ceeeEeee--ccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchh
Confidence            45666643  5577888888755332  221     345778899999998666666555566677778899999995 3


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC---ceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---SVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~---~~ki~dfg~a  153 (183)
                      ++.+++......             .........++.++-..+..||.++++|+|+..+||++.+++   .+.++|||++
T Consensus        97 ~vk~~i~~~~~~-------------~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls  163 (229)
T KOG3087|consen   97 TVKDFILSTMED-------------ESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLS  163 (229)
T ss_pred             HHHHHHHHHccC-------------cccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecch
Confidence            688888776431             233344477888999999999999999999999999996433   3479999999


Q ss_pred             CCCCcccccceeeee
Q psy2674         154 KDTYQKEYYKYRWVI  168 (183)
Q Consensus       154 ~~~~~~~~~~~~~~~  168 (183)
                      ......+.-+...|.
T Consensus       164 ~~s~~~EDKgVDLYV  178 (229)
T KOG3087|consen  164 SVSRLPEDKGVDLYV  178 (229)
T ss_pred             hcccCcccccceeee
Confidence            865554444444443

>KOG0603|consensus

Probab=99.43  E-value=1.9e-14  Score=112.84  Aligned_cols=148  Identities=19%  Similarity=0.189  Sum_probs=122.9

Q ss_pred             cCCCCcceEEEeeccCCCCHH-HHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCC
Q psy2674          13 SDPQDTSVLMAKSLVHSKDDE-ALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK   90 (183)
Q Consensus        13 ~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~   90 (183)
                      .....+..+|+|++.+..... .......|-.++..++ ||.++++.-.++.++..+++.++..++.|...+....    
T Consensus        17 ~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~----   92 (612)
T KOG0603|consen   17 GGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEV----   92 (612)
T ss_pred             ccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCC----
Confidence            445567788888887433211 1124566888888885 9999999999999999999999999999988877664    


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-ccccceeeeee
Q psy2674          91 DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYRWVIC  169 (183)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-~~~~~~~~~~~  169 (183)
                                 .+.+.....+..+++.+++++|+.++++||+|+.||+++.+|.+++.|||+++.... .-.+|+.-||+
T Consensus        93 -----------~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~eymA  161 (612)
T KOG0603|consen   93 -----------MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEYRA  161 (612)
T ss_pred             -----------chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhhhh
Confidence                       478888888999999999999999999999999999999999999999999985543 23488999999


Q ss_pred             cccCCC
Q psy2674         170 SNIAEG  175 (183)
Q Consensus       170 pe~~~~  175 (183)
                      ||+..|
T Consensus       162 pEI~~g  167 (612)
T KOG0603|consen  162 PEIING  167 (612)
T ss_pred             hHhhhc
Confidence            999985

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.40  E-value=3.3e-13  Score=99.14  Aligned_cols=163  Identities=14%  Similarity=0.119  Sum_probs=100.5

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCC----------CcceeeEEeEEecC-------
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLD----------HAHVVKMIGICRDG-------   63 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~----------h~~i~~~~~~~~~~-------   63 (183)
                      ....+.||.+++..+++++|+|+.....+  ....+++.+|.-....+.          |-.++-.++....+       
T Consensus        22 ~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~~~~~  101 (288)
T PF14531_consen   22 KGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKPPFFE  101 (288)
T ss_dssp             EETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-SEEE
T ss_pred             cCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCCccee
Confidence            34567799999999999999999863222  234567777765555532          22333333332211       


Q ss_pred             -----C-----ccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccc
Q psy2674          64 -----D-----PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA  133 (183)
Q Consensus        64 -----~-----~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~  133 (183)
                           +     ..+++|+-+. ++|..++..-......        ...+.....+.+..|++..+.+||..|++|+||+
T Consensus       102 ~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~--------~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen  102 RGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQT--------HSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             ECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTT--------SHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             cCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccc--------cchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence                 1     2356777775 8998887653221100        0113334556667899999999999999999999


Q ss_pred             cceeEeccCCceEEecccCCCCCCcccc--cceeeeeecccCC
Q psy2674         134 ARNCLISSDLSVKISLSGLSKDTYQKEY--YKYRWVICSNIAE  174 (183)
Q Consensus       134 ~~nil~~~~~~~ki~dfg~a~~~~~~~~--~~~~~~~~pe~~~  174 (183)
                      |+|++++.+|.+.++||+..........  ..+..|.|||...
T Consensus       173 ~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~  215 (288)
T PF14531_consen  173 PENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELES  215 (288)
T ss_dssp             GGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHH
T ss_pred             eeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhh
Confidence            9999999999999999988776555433  2245689999753

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.38  E-value=1.5e-11  Score=83.90  Aligned_cols=129  Identities=18%  Similarity=0.141  Sum_probs=92.4

Q ss_pred             CCceeeeccCCCCcceEEEeeccCC--CCHH-----HHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHS--KDDE-----ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~--~~~~-----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      +.|.++.+  .--|.++++|.-.++  +.++     ..++..+|+.++.++.--.+.--.=++.+++.-.|+|||++|..
T Consensus         8 AEa~i~~~--~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~   85 (204)
T COG3642           8 AEAIIYLT--DFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGEL   85 (204)
T ss_pred             cceeEEee--eccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChh
Confidence            45555544  223556777765433  2222     23466789999998865565555555667788889999999888


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+...                      ...++..+-.-+.-||.+||+|+|+.++||++.... +.++|||++....
T Consensus        86 lkd~l~~~----------------------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~  142 (204)
T COG3642          86 LKDALEEA----------------------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD  142 (204)
T ss_pred             HHHHHHhc----------------------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence            88887543                      134566777778999999999999999999996554 9999999998555


Q ss_pred             c
Q psy2674         158 Q  158 (183)
Q Consensus       158 ~  158 (183)
                      .
T Consensus       143 ~  143 (204)
T COG3642         143 E  143 (204)
T ss_pred             c
Confidence            4

>KOG4158|consensus

Probab=99.35  E-value=2.2e-12  Score=97.16  Aligned_cols=111  Identities=15%  Similarity=0.230  Sum_probs=84.2

Q ss_pred             CCcceeeEEeEEecC---------------------------CccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCC
Q psy2674          49 DHAHVVKMIGICRDG---------------------------DPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVR  101 (183)
Q Consensus        49 ~h~~i~~~~~~~~~~---------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~  101 (183)
                      +||||++++++|.++                           .+.|++|...+ .+|..++-..                
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~----------------  336 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR----------------  336 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC----------------
Confidence            699999999887541                           23678887776 7888888655                


Q ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec----cCCceEEecccCCCCCCc--------c---cccceee
Q psy2674         102 SLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS----SDLSVKISLSGLSKDTYQ--------K---EYYKYRW  166 (183)
Q Consensus       102 ~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~----~~~~~ki~dfg~a~~~~~--------~---~~~~~~~  166 (183)
                      ..+......+..|+++++.|||.+|+.|||+|.+|||+.    .-...-++|||.+-.-..        +   +..|...
T Consensus       337 ~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~  416 (598)
T KOG4158|consen  337 HRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAK  416 (598)
T ss_pred             CCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcce
Confidence            356677788899999999999999999999999999993    345678899998642111        1   2234556


Q ss_pred             eeecccCCCc
Q psy2674         167 VICSNIAEGR  176 (183)
Q Consensus       167 ~~~pe~~~~~  176 (183)
                      .+|||+....
T Consensus       417 lmAPEi~ta~  426 (598)
T KOG4158|consen  417 LMAPEIATAV  426 (598)
T ss_pred             ecchhhhhcC
Confidence            7999997653

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.35  E-value=8.9e-12  Score=85.53  Aligned_cols=121  Identities=12%  Similarity=0.041  Sum_probs=84.7

Q ss_pred             ceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcce-eeEEeEEecCCccEEEEeeCCCCCHHHHHHhh
Q psy2674           7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHV-VKMIGICRDGDPHYLLLEYTDWGDLKQFLLAT   85 (183)
Q Consensus         7 ~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   85 (183)
                      +++|+...  ++..+++|+.......  ...+..|+..++.+...++ .+++...  .+..+++|||++|.++.+.   .
T Consensus        12 ~~vy~~~~--~~~~~~lK~~~~~~~~--~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~~~---~   82 (170)
T cd05151          12 NKNYRVEV--ANKKYVVRIPGNGTEL--LINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSELLTE---D   82 (170)
T ss_pred             CceEEEEE--CCeEEEEEeCCCCccc--ccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCccccc---c
Confidence            45665553  3788999997644321  1245778888888854443 3455443  3346899999998776542   0


Q ss_pred             ccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc-----eecccccceeEeccCCceEEecccCCCCCC
Q psy2674          86 RKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL-----IHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i-----vH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                                      ..    ......++..++..||+.++     +|+|++|.||+++ ++.++++||+.+....
T Consensus        83 ----------------~~----~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~~  138 (170)
T cd05151          83 ----------------FS----DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMND  138 (170)
T ss_pred             ----------------cc----CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCCC
Confidence                            01    12345688899999999885     9999999999998 6789999999988544

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1023|consensus

Probab=99.30  E-value=7e-12  Score=97.85  Aligned_cols=120  Identities=22%  Similarity=0.316  Sum_probs=101.7

Q ss_pred             HhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc
Q psy2674          45 FCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD  124 (183)
Q Consensus        45 l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~  124 (183)
                      ++.+.|.|+.+++|.+.++....++.+||..|+|.+.+....              ..++..-...+..+++.|+.|+|+
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~--------------~~~d~~F~~s~~rdi~~Gl~ylh~   66 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED--------------IKLDYFFILSFIRDISKGLAYLHN   66 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc--------------cCccHHHHHHHHHHHHHHHHHHhc
Confidence            356789999999999999999999999999999999998743              257888888999999999999999


Q ss_pred             CCc-eecccccceeEeccCCceEEecccCCCCCCcc-------cccceeeeeecccCCCccc
Q psy2674         125 KRL-IHKDIAARNCLISSDLSVKISLSGLSKDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       125 ~~i-vH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..+ .|+.++..|++++....+|+.|||+.......       .......|.|||.+.+..+
T Consensus        67 s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~  128 (484)
T KOG1023|consen   67 SPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALS  128 (484)
T ss_pred             CcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhccccc
Confidence            877 99999999999999999999999998866421       1112346789999887544

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.30  E-value=1.2e-10  Score=85.48  Aligned_cols=127  Identities=12%  Similarity=0.063  Sum_probs=89.6

Q ss_pred             CCcceEEEeeccCCCCHHHHH----------HHHHHHHHHhcCCCcce--eeEEeEEec-----CCccEEEEeeCCCC-C
Q psy2674          16 QDTSVLMAKSLVHSKDDEALH----------EFKREIDLFCKLDHAHV--VKMIGICRD-----GDPHYLLLEYTDWG-D   77 (183)
Q Consensus        16 ~~~~~vavK~~~~~~~~~~~~----------~~~~E~~~l~~l~h~~i--~~~~~~~~~-----~~~~~lv~e~~~~~-~   77 (183)
                      -.|+.+.+|............          .+.+|...+..+...+|  .....+.+.     ....++++|++++. +
T Consensus        43 ~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~s  122 (268)
T PRK15123         43 LAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTIS  122 (268)
T ss_pred             ECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCcc
Confidence            456789999764332211111          36788888877743332  333444432     23468999999975 7


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-------CCceEEecc
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-------DLSVKISLS  150 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-------~~~~ki~df  150 (183)
                      |.+++.....             ...+......++.++...+..||+.|++|+|+++.|||++.       ...+.++||
T Consensus       123 L~~~~~~~~~-------------~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl  189 (268)
T PRK15123        123 LEDYCADWAT-------------NPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDL  189 (268)
T ss_pred             HHHHHHhhcc-------------cCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEEC
Confidence            9888864321             12456677788999999999999999999999999999974       478999999


Q ss_pred             cCCCC
Q psy2674         151 GLSKD  155 (183)
Q Consensus       151 g~a~~  155 (183)
                      +.+..
T Consensus       190 ~r~~~  194 (268)
T PRK15123        190 HRAQI  194 (268)
T ss_pred             Ccccc
Confidence            98853

>KOG1243|consensus

Probab=99.25  E-value=5.4e-11  Score=94.63  Aligned_cols=124  Identities=15%  Similarity=0.219  Sum_probs=104.1

Q ss_pred             eccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCC
Q psy2674          11 KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK   90 (183)
Q Consensus        11 ~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~   90 (183)
                      .+....++.+|.|...+.... ...+...+.++.++.++||+|+++++.++.++..|+++|.+  -.|...+...     
T Consensus        30 ~~t~k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l-----  101 (690)
T KOG1243|consen   30 DGTRKADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKEL-----  101 (690)
T ss_pred             ccceeccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHh-----
Confidence            355678899999999885555 55567888999999999999999999999999999999986  5677777654     


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          91 DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS-DKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                                   ....+..-++||+.||.||| +.+++|+++.-..|+++..|.+||++|.++..
T Consensus       102 -------------~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~  154 (690)
T KOG1243|consen  102 -------------GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSK  154 (690)
T ss_pred             -------------HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEec
Confidence                         24445555789999999997 56899999999999999999999999988753

>KOG1240|consensus

Probab=99.23  E-value=1.3e-12  Score=108.46  Aligned_cols=149  Identities=17%  Similarity=0.213  Sum_probs=106.9

Q ss_pred             eeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHH--hcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhh
Q psy2674           8 RGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLF--CKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLAT   85 (183)
Q Consensus         8 ~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l--~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~   85 (183)
                      ++.+|.+  +...|++|++.+..+...++.+.++++-+  ...++||.+.+.-+-+.+...|++=+|.. .+|.+.++-+
T Consensus        38 Kv~r~k~--~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvk-hnLyDRlSTR  114 (1431)
T KOG1240|consen   38 KVARAKD--REGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVK-HNLYDRLSTR  114 (1431)
T ss_pred             hhhhccC--CCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHh-hhhhhhhccc
Confidence            3444433  33349999988666544444555444433  44489999988777666667788888876 8899988766


Q ss_pred             ccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC---Ccc---
Q psy2674          86 RKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT---YQK---  159 (183)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~---~~~---  159 (183)
                      +               -+......-++.|++.|+..+|..|+.|+|||.+|||++.=+.+.|+||..-+..   .++   
T Consensus       115 P---------------FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad  179 (1431)
T KOG1240|consen  115 P---------------FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD  179 (1431)
T ss_pred             h---------------HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence            4               3566667778899999999999999999999999999999999999999765421   111   


Q ss_pred             -ccc-----ceeeeeecccCC
Q psy2674         160 -EYY-----KYRWVICSNIAE  174 (183)
Q Consensus       160 -~~~-----~~~~~~~pe~~~  174 (183)
                       .++     +-..|.|||-+-
T Consensus       180 f~fFFDTSrRRtCYiAPERFv  200 (1431)
T KOG1240|consen  180 FTFFFDTSRRRTCYIAPERFV  200 (1431)
T ss_pred             ceEEEecCCceeeecChHhhh
Confidence             111     134688999753

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.19  E-value=1.9e-10  Score=80.11  Aligned_cols=101  Identities=19%  Similarity=0.198  Sum_probs=67.6

Q ss_pred             HHHHHHHHHHHhcCCCc--ceeeEEeEEecCCccEEEEeeCC--CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHH
Q psy2674          35 LHEFKREIDLFCKLDHA--HVVKMIGICRDGDPHYLLLEYTD--WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVT  110 (183)
Q Consensus        35 ~~~~~~E~~~l~~l~h~--~i~~~~~~~~~~~~~~lv~e~~~--~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (183)
                      .....+|.+.|..+...  ++.+.+++    +...++|||++  |..+..+....                 ++......
T Consensus        52 ~~~~~~E~~~L~~l~~~Gv~vP~p~~~----~~~~ivME~I~~~G~~~~~l~~~~-----------------~~~~~~~~  110 (188)
T PF01163_consen   52 REWAKKEFRNLKRLYEAGVPVPKPYDY----NRNVIVMEYIGEDGVPLPRLKDVD-----------------LSPEEPKE  110 (188)
T ss_dssp             HHHHHHHHHHHHHCCCTT-SS--EEEE----ETTEEEEE--EETTEEGGCHHHCG-----------------GGGSTHHH
T ss_pred             HHHHHHHHHHHHHHHHCCccCCcEEEE----eCCEEEEEecCCCccchhhHHhcc-----------------ccchhHHH
Confidence            34667899999999655  34555544    24589999998  65565544322                 22344566


Q ss_pred             HHHHHHHHHHH-HhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674         111 MAYQVALGLEH-ISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus       111 ~~~~i~~~l~~-lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      ++.+++..+.. +|..|++|+|+++.||+++.+ .+.|+|||.+....
T Consensus       111 ~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  111 LLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             HHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             HHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence            67777775655 579999999999999999877 99999999987544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3741|consensus

Probab=99.18  E-value=3e-10  Score=88.38  Aligned_cols=154  Identities=16%  Similarity=0.154  Sum_probs=116.2

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEe----cCCccEEEEeeCCC-CCHH
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICR----DGDPHYLLLEYTDW-GDLK   79 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----~~~~~~lv~e~~~~-~~L~   79 (183)
                      .....|++....+|.-+++|.+.-.++.. .-..-.-++.++++.|.|++.+.++|.    ++..+.++++|.++ ++|.
T Consensus       288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~-~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~  366 (655)
T KOG3741|consen  288 FSITTYKATSNVDGNAYVLKRLHGDRDQS-TNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY  366 (655)
T ss_pred             ccceeEeeeeccCCceeeeeeeccccccC-cccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence            45678999999999999999994222211 101123467889999999999999886    35678999999874 4577


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +......+.....+..--..+...++...|.++.|+..+|..+|+.|+..+-+.|++|+++.+.+++|...|+......+
T Consensus       367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d  446 (655)
T KOG3741|consen  367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQED  446 (655)
T ss_pred             HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence            77655543322222222334457899999999999999999999999999999999999999999999999887755443

>KOG0195|consensus

Probab=99.15  E-value=1.5e-11  Score=88.51  Aligned_cols=148  Identities=18%  Similarity=0.279  Sum_probs=108.0

Q ss_pred             CcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCC
Q psy2674          17 DTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGS   95 (183)
Q Consensus        17 ~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~   95 (183)
                      .|-.+++|+++.... ..--..|..|.-.++-+.||||+.+++.|..+..+.++..|++.|+|.+.+.....        
T Consensus       212 qgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlhe~t~--------  283 (448)
T KOG0195|consen  212 QGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLHEQTS--------  283 (448)
T ss_pred             cCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHhcCcc--------
Confidence            344566777653221 11123677888889999999999999999999999999999999999999976532        


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-C-ceecccccceeEeccCCceEEe--cccCCCCCCcccccceeeeeecc
Q psy2674          96 GKPRVRSLSTSQAVTMAYQVALGLEHISDK-R-LIHKDIAARNCLISSDLSVKIS--LSGLSKDTYQKEYYKYRWVICSN  171 (183)
Q Consensus        96 ~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~-ivH~di~~~nil~~~~~~~ki~--dfg~a~~~~~~~~~~~~~~~~pe  171 (183)
                           ...+..+++.++.+++.|+.|||+. + |..-.+....+++|++.+.+|.  |--++-... ...| .+.+++||
T Consensus       284 -----vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~-gr~y-~pawmspe  356 (448)
T KOG0195|consen  284 -----VVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEV-GRAY-SPAWMSPE  356 (448)
T ss_pred             -----EEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeecc-cccc-CcccCCHH
Confidence                 2467788999999999999999987 3 3445688889999988776654  433332111 1222 45677899


Q ss_pred             cCCCcccc
Q psy2674         172 IAEGRRLN  179 (183)
Q Consensus       172 ~~~~~~~~  179 (183)
                      -+..++-|
T Consensus       357 alqrkped  364 (448)
T KOG0195|consen  357 ALQRKPED  364 (448)
T ss_pred             HHhcCchh
Confidence            88876654

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.15  E-value=3.5e-10  Score=80.74  Aligned_cols=75  Identities=16%  Similarity=0.184  Sum_probs=50.4

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCC--cceeeEEeEEecC---CccEEEEeeCCCCCHHH
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDH--AHVVKMIGICRDG---DPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~---~~~~lv~e~~~~~~L~~   80 (183)
                      ...+|+.... +|..+++|.............+.+|.+.++.+.+  ..+.+++.+....   +..++++||++|.++.+
T Consensus        11 ~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~   89 (223)
T cd05154          11 SNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRD   89 (223)
T ss_pred             cceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCC
Confidence            3456666543 3688999997644322223467889999999865  3456677776553   36789999999877655


Q ss_pred             H
Q psy2674          81 F   81 (183)
Q Consensus        81 ~   81 (183)
                      .
T Consensus        90 ~   90 (223)
T cd05154          90 R   90 (223)
T ss_pred             C
Confidence            3

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG1033|consensus

Probab=99.14  E-value=6.2e-12  Score=97.18  Aligned_cols=100  Identities=22%  Similarity=0.271  Sum_probs=82.8

Q ss_pred             ccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc
Q psy2674          65 PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS  144 (183)
Q Consensus        65 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~  144 (183)
                      .++|.|++|.-.+|.+.+.+....            -..+....+.++.|+..+++|   ++.+|+|+||.||++..+..
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~------------e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q  394 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTG------------EERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQ  394 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcc------------cccchhHHHHHHHhhccchhh---ccchhhhccccccccccchh
Confidence            478999999999999999754321            135566788899999999999   99999999999999999999


Q ss_pred             eEEecccCCCCCCc-----------ccccceeeeeecccCCCcccc
Q psy2674         145 VKISLSGLSKDTYQ-----------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       145 ~ki~dfg~a~~~~~-----------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++|.|||+......           ....+|.|||+||.+.|+.|+
T Consensus       395 ~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~  440 (516)
T KOG1033|consen  395 LKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYS  440 (516)
T ss_pred             hhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhh
Confidence            99999999764332           245779999999999998774

>KOG0590|consensus

Probab=99.14  E-value=6.2e-12  Score=101.67  Aligned_cols=147  Identities=22%  Similarity=0.256  Sum_probs=117.5

Q ss_pred             CCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCCHHHHHH-hhccCCCCC
Q psy2674          16 QDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL-ATRKDSKDK   92 (183)
Q Consensus        16 ~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~   92 (183)
                      .+...+|.|.+... ........+..|..+-+.+. |.|++.+++...+.+..++.+++.+++++...+. ...      
T Consensus        44 ~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~------  117 (601)
T KOG0590|consen   44 DPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDS------  117 (601)
T ss_pred             CCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCc------
Confidence            44556667776633 23334446667888888885 9999999999999999999999999998887773 221      


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCceecccccceeEeccCC-ceEEecccCCCCCCc-c-------ccc
Q psy2674          93 SGSGKPRVRSLSTSQAVTMAYQVALGLEHIS-DKRLIHKDIAARNCLISSDL-SVKISLSGLSKDTYQ-K-------EYY  162 (183)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~ivH~di~~~nil~~~~~-~~ki~dfg~a~~~~~-~-------~~~  162 (183)
                              ...+......++.|+..++.|+| ..++.|+|++|+|.+++..+ ..+++|||+|..... +       ..+
T Consensus       118 --------~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~  189 (601)
T KOG0590|consen  118 --------TGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRC  189 (601)
T ss_pred             --------cCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeeccc
Confidence                    14666778888999999999999 99999999999999999988 999999999986554 2       456


Q ss_pred             c-eeeeeecccCCCc
Q psy2674         163 K-YRWVICSNIAEGR  176 (183)
Q Consensus       163 ~-~~~~~~pe~~~~~  176 (183)
                      + ++-|++||+..+.
T Consensus       190 g~s~~y~a~E~~~~~  204 (601)
T KOG0590|consen  190 GSSPPYGAPEHLSGK  204 (601)
T ss_pred             CCCCCCCCcccccch
Confidence            7 8899999998774

>KOG0606|consensus

Probab=99.08  E-value=7e-11  Score=98.04  Aligned_cols=63  Identities=24%  Similarity=0.292  Sum_probs=54.3

Q ss_pred             HHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC--------------------cccccceeeeeecccCCC
Q psy2674         116 ALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY--------------------QKEYYKYRWVICSNIAEG  175 (183)
Q Consensus       116 ~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~--------------------~~~~~~~~~~~~pe~~~~  175 (183)
                      +.+++|+|+-||+|||+||+|.+|..-|.+|+.|||++....                    ....++|+.|+|||+...
T Consensus       153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr  232 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR  232 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh
Confidence            668999999999999999999999999999999999976322                    235688999999999876


Q ss_pred             ccc
Q psy2674         176 RRL  178 (183)
Q Consensus       176 ~~~  178 (183)
                      +.|
T Consensus       233 qgy  235 (1205)
T KOG0606|consen  233 QGY  235 (1205)
T ss_pred             hcc
Confidence            554

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.07  E-value=3.1e-09  Score=75.45  Aligned_cols=107  Identities=19%  Similarity=0.161  Sum_probs=81.5

Q ss_pred             HHHHHHHHHHhcCCC--cceeeEEeEEecCC----ccEEEEeeCCCC-CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHH
Q psy2674          36 HEFKREIDLFCKLDH--AHVVKMIGICRDGD----PHYLLLEYTDWG-DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQA  108 (183)
Q Consensus        36 ~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~----~~~lv~e~~~~~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (183)
                      .+..+|...+..+..  -.....+++.+...    ..++++|.+++. +|.+++....               ..+....
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~---------------~~~~~~~  120 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE---------------QLDPSQR  120 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc---------------ccchhhH
Confidence            367778887777743  23344555554422    357999999864 6999887642               2455677


Q ss_pred             HHHHHHHHHHHHHHhcCCceecccccceeEeccCC---ceEEecccCCCCCC
Q psy2674         109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---SVKISLSGLSKDTY  157 (183)
Q Consensus       109 ~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~---~~ki~dfg~a~~~~  157 (183)
                      ..++.++...+.-||++|++|+|+++.|||++.+.   .+.++||+-++...
T Consensus       121 ~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  121 RELLRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            88889999999999999999999999999998776   89999999887544

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG0601|consensus

Probab=98.93  E-value=1.1e-09  Score=86.07  Aligned_cols=154  Identities=14%  Similarity=0.121  Sum_probs=119.7

Q ss_pred             eeeeccC--CCCcceEEEeecc-CCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHH
Q psy2674           8 RGLKASD--PQDTSVLMAKSLV-HSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL   83 (183)
Q Consensus         8 ~~~~~~~--~~~~~~vavK~~~-~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   83 (183)
                      .++.+..  ..++..+|+|.-. ....+....+-.+|...-+.+ .|++.++.+..++..+..++-+|.++ .+|.++..
T Consensus       131 s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~~-~sl~~~~~  209 (524)
T KOG0601|consen  131 SVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELCG-ESLQSYCH  209 (524)
T ss_pred             eeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeecccc-chhHHhhh
Confidence            3455555  7888999998844 223333333456788878888 69999998999999999999999987 77877776


Q ss_pred             hhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH----HHHHHhcCCceecccccceeEeccC-CceEEecccCCCCCCc
Q psy2674          84 ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVAL----GLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGLSKDTYQ  158 (183)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~----~l~~lh~~~ivH~di~~~nil~~~~-~~~ki~dfg~a~~~~~  158 (183)
                      ....              .++....+....+...    |+.++|..+++|.|++|.|++...+ ..++++|||+...+..
T Consensus       210 ~~~~--------------~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~  275 (524)
T KOG0601|consen  210 TPCN--------------FLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISD  275 (524)
T ss_pred             cccc--------------cCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccC
Confidence            5432              3677778888888888    9999999999999999999999888 8999999999886665


Q ss_pred             ccc----------cceeeeeecccCCCc
Q psy2674         159 KEY----------YKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ~~~----------~~~~~~~~pe~~~~~  176 (183)
                      ...          .+..-|++||+..+-
T Consensus       276 ~~~~~~~~~~~r~~~~~~Y~~ke~~~~l  303 (524)
T KOG0601|consen  276 GNFSSVFKVSKRPEGDCIYAAKELLNGL  303 (524)
T ss_pred             CccccceeeeecCCCCceEeChhhhccc
Confidence            432          234569999998763

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.87  E-value=3.7e-08  Score=71.44  Aligned_cols=132  Identities=15%  Similarity=0.150  Sum_probs=95.5

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCC---------------------HHHHHHHHHHHHHHhcCCCc--ceeeEE
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKD---------------------DEALHEFKREIDLFCKLDHA--HVVKMI   57 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---------------------~~~~~~~~~E~~~l~~l~h~--~i~~~~   57 (183)
                      +|.--.+.||.+.+. .|.++|+|.-..+..                     ...+...++|.+.|..+...  .+.+.+
T Consensus        99 IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P~  177 (304)
T COG0478          99 IGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKPI  177 (304)
T ss_pred             cccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCCcc
Confidence            355667888888776 788999997542211                     12344667889999888544  444444


Q ss_pred             eEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceeccccccee
Q psy2674          58 GICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC  137 (183)
Q Consensus        58 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~ni  137 (183)
                      ++    +...++||+++|-.|...-                    +..+..-.++..|+..+...-..|+||+|+++-||
T Consensus       178 ~~----nRHaVvMe~ieG~eL~~~r--------------------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNI  233 (304)
T COG0478         178 AW----NRHAVVMEYIEGVELYRLR--------------------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNI  233 (304)
T ss_pred             cc----ccceeeeehcccceeeccc--------------------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheE
Confidence            43    5678999999975554322                    23445556677788888888899999999999999


Q ss_pred             EeccCCceEEecccCCCCCC
Q psy2674         138 LISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus       138 l~~~~~~~ki~dfg~a~~~~  157 (183)
                      +++++|.+.++||=.+....
T Consensus       234 lV~~dg~~~vIDwPQ~v~~~  253 (304)
T COG0478         234 LVTEDGDIVVIDWPQAVPIS  253 (304)
T ss_pred             EEecCCCEEEEeCcccccCC
Confidence            99999999999998776443

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.78  E-value=8.2e-08  Score=68.01  Aligned_cols=68  Identities=18%  Similarity=0.286  Sum_probs=52.4

Q ss_pred             CCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC
Q psy2674          63 GDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD  142 (183)
Q Consensus        63 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~  142 (183)
                      ....++++||++|..|.+...                   +++.    +.-.+..++..+|+.|+.|+|.+|+|++++++
T Consensus       115 ~~~~~ll~EYIeG~~l~d~~~-------------------i~e~----~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~  171 (229)
T PF06176_consen  115 TSSYVLLMEYIEGVELNDIED-------------------IDED----LAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNN  171 (229)
T ss_pred             eeEEEEEEEEecCeecccchh-------------------cCHH----HHHHHHHHHHHHHHcCCccCCCCcCcEEEECC
Confidence            345678999999888866542                   2222    33456677899999999999999999999755


Q ss_pred             CceEEecccCCC
Q psy2674         143 LSVKISLSGLSK  154 (183)
Q Consensus       143 ~~~ki~dfg~a~  154 (183)
                       .++++||+-.+
T Consensus       172 -~i~iID~~~k~  182 (229)
T PF06176_consen  172 -GIRIIDTQGKR  182 (229)
T ss_pred             -cEEEEECcccc
Confidence             49999998765

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1266|consensus

Probab=98.64  E-value=9.4e-09  Score=76.14  Aligned_cols=96  Identities=24%  Similarity=0.319  Sum_probs=80.3

Q ss_pred             HhcCCCcceeeEEeEEecC-----CccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
Q psy2674          45 FCKLDHAHVVKMIGICRDG-----DPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGL  119 (183)
Q Consensus        45 l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  119 (183)
                      +-.+.|.||++.+.++.+.     ....++.||++.|++.+++++..++.           ..+.......|+.||+.||
T Consensus       121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~-----------~a~~~~~wkkw~tqIlsal  189 (458)
T KOG1266|consen  121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQ-----------KALFQKAWKKWCTQILSAL  189 (458)
T ss_pred             HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhh-----------hhhhHHHHHHHHHHHHhhh
Confidence            3445688999998888653     35789999999999999999986632           2567788889999999999


Q ss_pred             HHHhcC--CceecccccceeEeccCCceEEeccc
Q psy2674         120 EHISDK--RLIHKDIAARNCLISSDLSVKISLSG  151 (183)
Q Consensus       120 ~~lh~~--~ivH~di~~~nil~~~~~~~ki~dfg  151 (183)
                      .|||+.  .++|+++..+.+++..++.+|++.-.
T Consensus       190 ~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~a  223 (458)
T KOG1266|consen  190 SYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVA  223 (458)
T ss_pred             hhhhccCCccccCCcchhheeecCCceEEecccC
Confidence            999987  78999999999999999999987543

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.61  E-value=7.7e-07  Score=70.99  Aligned_cols=90  Identities=14%  Similarity=0.127  Sum_probs=60.8

Q ss_pred             eeEEeEEe-cCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy2674          54 VKMIGICR-DGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI  132 (183)
Q Consensus        54 ~~~~~~~~-~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di  132 (183)
                      +++-.++. ..+.-.++|||++|-.+.+.......              +.+.........++  -++.+-..|+.|.|.
T Consensus       228 v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--------------g~d~k~ia~~~~~~--f~~q~~~dgffHaDp  291 (517)
T COG0661         228 VYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--------------GIDRKELAELLVRA--FLRQLLRDGFFHADP  291 (517)
T ss_pred             eEeceeehhccCCcEEEEEeeCCEecccHHHHHhc--------------CCCHHHHHHHHHHH--HHHHHHhcCccccCC
Confidence            34444443 35677899999998888887533321              34432222222221  223344589999999


Q ss_pred             ccceeEeccCCceEEecccCCCCCCcc
Q psy2674         133 AARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus       133 ~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +|.||+++.++.+-+.|||......++
T Consensus       292 HpGNi~v~~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         292 HPGNILVRSDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             CccceEEecCCcEEEEcCcceecCCHH
Confidence            999999999999999999998866653

>PRK09902 hypothetical protein; Provisional

Probab=98.57  E-value=1.1e-06  Score=61.96  Aligned_cols=107  Identities=15%  Similarity=0.085  Sum_probs=78.9

Q ss_pred             HHHHHHHHHHHhcCCCcc--eeeEEeEEe-c--C--CccEEEEeeCCC-CCHHHHHHhhccCCCCCCCCCCCCCCCCCHH
Q psy2674          35 LHEFKREIDLFCKLDHAH--VVKMIGICR-D--G--DPHYLLLEYTDW-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTS  106 (183)
Q Consensus        35 ~~~~~~E~~~l~~l~h~~--i~~~~~~~~-~--~--~~~~lv~e~~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (183)
                      ...+.+|...++.+...+  +.+.. ++. .  +  -..+||+|-+++ .+|.+.+.....             ...+..
T Consensus        63 ~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe~L~g~~~L~~~l~~~~~-------------~~~~~~  128 (216)
T PRK09902         63 RPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTEDMAGFISIADWYAQHAV-------------SPYSDE  128 (216)
T ss_pred             chHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEEeCCCCccHHHHHhcCCc-------------CCcchH
Confidence            347889999999884322  44443 222 1  1  235789997654 568888755421             135677


Q ss_pred             HHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc--eEEecccCCCC
Q psy2674         107 QAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--VKISLSGLSKD  155 (183)
Q Consensus       107 ~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~--~ki~dfg~a~~  155 (183)
                      ....+..++...+.-||+.|+.|+|+.+.||+++..+.  +.++||.-++.
T Consensus       129 ~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        129 VRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            77889999999999999999999999999999986666  99999987763

>KOG0601|consensus

Probab=98.57  E-value=7.6e-08  Score=75.89  Aligned_cols=134  Identities=21%  Similarity=0.186  Sum_probs=101.8

Q ss_pred             ceeeeccCC-CCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHH
Q psy2674           7 ARGLKASDP-QDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL   83 (183)
Q Consensus         7 ~~~~~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   83 (183)
                      +.++.+.-. .++..+++|.+.+.. .......-..|+.+...+ .|.+.++....|..-...++-.||++++++.....
T Consensus       279 ~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~  358 (524)
T KOG0601|consen  279 SSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSV  358 (524)
T ss_pred             ccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhH
Confidence            444443333 678889999887443 222222335677777777 68999998888877777789999999888766552


Q ss_pred             hhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC-CceEEecccCCCC
Q psy2674          84 ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGLSKD  155 (183)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~-~~~ki~dfg~a~~  155 (183)
                      ..               ..+.+.-.+....|++.++.++|+..++|+|++|.||++.++ +..++.||+.+..
T Consensus       359 ~~---------------~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  359 TS---------------QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR  416 (524)
T ss_pred             HH---------------HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence            22               247788889999999999999999999999999999999765 8899999998863

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.55  E-value=3.5e-06  Score=60.69  Aligned_cols=65  Identities=23%  Similarity=0.149  Sum_probs=44.7

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcc--eeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAH--VVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      .+++|+.    .+..+++|.........   .+.+|.+.++.+..-+  +.+.+++..+.+...++||+++|.+
T Consensus        14 t~~~y~~----~~~~~VlR~~~~~~~~~---~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172        14 NGESYTH----KTGKWMLKLYNPGFDKE---TIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             CcceeEe----cCCCEEEEeCCCCCCHH---HHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence            3456752    25567888876543332   4688999998885333  4667888777777889999999753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.52  E-value=2.9e-06  Score=61.73  Aligned_cols=70  Identities=17%  Similarity=0.088  Sum_probs=48.8

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      .+.+|+....  +..+.+|......    ...+.+|++.++.+ .+.-+.+++++....+..+++||+++|.++...
T Consensus        12 ~~~v~~~~~~--~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~   82 (244)
T cd05150          12 GATVYRLDGK--NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAAL   82 (244)
T ss_pred             cCeEEEEcCC--CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHh
Confidence            3567776543  3678888876432    22567788888888 345566777777766678999999998777644

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1235|consensus

Probab=98.42  E-value=3e-06  Score=67.66  Aligned_cols=139  Identities=17%  Similarity=0.133  Sum_probs=85.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH------------------------------HHHHHHHHHH------HHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD------------------------------EALHEFKREI------DLF   45 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------------------------------~~~~~~~~E~------~~l   45 (183)
                      +....|.|++|+-.. |+.||||+-.+.-..                              +..+.+..|+      +-.
T Consensus       170 aaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~Na  248 (538)
T KOG1235|consen  170 AAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKNA  248 (538)
T ss_pred             hhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHhH
Confidence            456778899998777 999999997753111                              1112222232      222


Q ss_pred             hc----CCCcc------eeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy2674          46 CK----LDHAH------VVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQV  115 (183)
Q Consensus        46 ~~----l~h~~------i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  115 (183)
                      ..    +.|-+      |.+++..+  .++..++|||++|..+.+.-.-...              +++...+...+.+.
T Consensus       249 e~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~--------------gi~~~~i~~~l~~~  312 (538)
T KOG1235|consen  249 ERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKR--------------GISPHDILNKLVEA  312 (538)
T ss_pred             HHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHc--------------CCCHHHHHHHHHHH
Confidence            22    23334      33333333  3567899999999887765433321              35555443333332


Q ss_pred             HHHHHHHhcCCceecccccceeEecc----CCceEEecccCCCCCCcc
Q psy2674         116 ALGLEHISDKRLIHKDIAARNCLISS----DLSVKISLSGLSKDTYQK  159 (183)
Q Consensus       116 ~~~l~~lh~~~ivH~di~~~nil~~~----~~~~ki~dfg~a~~~~~~  159 (183)
                      ..  +-+-..|++|+|-+|.||++..    +..+.+-|||+...+...
T Consensus       313 ~~--~qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~  358 (538)
T KOG1235|consen  313 YL--EQIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK  358 (538)
T ss_pred             HH--HHHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence            22  2233567999999999999983    678999999998866654

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.37  E-value=7.2e-06  Score=59.08  Aligned_cols=136  Identities=16%  Similarity=0.092  Sum_probs=83.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHH-H---------------------H-HHHHHHHHHHhcCC--CcceeeE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDE-A---------------------L-HEFKREIDLFCKLD--HAHVVKM   56 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~-~---------------------~-~~~~~E~~~l~~l~--h~~i~~~   56 (183)
                      |..-.|+||+|.. .++..+|+|+.......- .                     . .....|..-|+.+.  .-.+.+-
T Consensus        57 stGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~P  135 (268)
T COG1718          57 STGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPEP  135 (268)
T ss_pred             cCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCc
Confidence            4456788887755 678999999986432110 0                     0 01123444444431  2222222


Q ss_pred             EeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccc
Q psy2674          57 IGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAAR  135 (183)
Q Consensus        57 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~  135 (183)
                      +.+.    ...++||+++...     ...+.          .....+.......+..+++..+.-|-. .++||+|++.-
T Consensus       136 i~~~----~nVLvMEfIg~~g-----~pAP~----------LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEy  196 (268)
T COG1718         136 IAFR----NNVLVMEFIGDDG-----LPAPR----------LKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEY  196 (268)
T ss_pred             eeec----CCeEEEEeccCCC-----CCCCC----------cccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhh
Confidence            3332    2468999986321     00100          011123333577778888888888877 89999999999


Q ss_pred             eeEeccCCceEEecccCCCCCCc
Q psy2674         136 NCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       136 nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      |||+. ++.+.|+|||.|.....
T Consensus       197 NiL~~-~~~p~iID~~QaV~~~h  218 (268)
T COG1718         197 NILVH-DGEPYIIDVSQAVTIDH  218 (268)
T ss_pred             heEEE-CCeEEEEECccccccCC
Confidence            99998 89999999999985543

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=98.13  E-value=2e-05  Score=55.17  Aligned_cols=100  Identities=19%  Similarity=0.177  Sum_probs=76.1

Q ss_pred             HHHHHHHhcCCC-cceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy2674          39 KREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVAL  117 (183)
Q Consensus        39 ~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  117 (183)
                      ..|.-+++.+++ +++.+++|+|-+    .++.|+.+.+++.......            ......++..+..++.+++.
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l------------~~~~~~~w~~R~~iA~~lL~   70 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPL------------SQFLQSPWEQRAKIALQLLE   70 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCcccccccccc------------ccccccCHHHHHHHHHHHHH
Confidence            357888888854 699999999943    6788998866554220000            00013678999999999999


Q ss_pred             HHHHHhc---CCceecccccceeEeccCCceEEecccCCC
Q psy2674         118 GLEHISD---KRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus       118 ~l~~lh~---~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      .+.+++.   ..+.-.|++++|+.+++++++|++|.....
T Consensus        71 ~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   71 LLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVF  110 (188)
T ss_pred             HHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcc
Confidence            9999987   357779999999999999999999997655

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.07  E-value=0.00021  Score=50.40  Aligned_cols=121  Identities=14%  Similarity=0.190  Sum_probs=78.1

Q ss_pred             CCCcceEEEeeccCCC---------------CHHHHHHHHHHHHHHhcCC------CcceeeEEeEEecCCccEEEEeeC
Q psy2674          15 PQDTSVLMAKSLVHSK---------------DDEALHEFKREIDLFCKLD------HAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus        15 ~~~~~~vavK~~~~~~---------------~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      ..+....+||+.....               ......+..+|+.....+.      +.+|.+++|+.++.....+++|.+
T Consensus        20 HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I   99 (199)
T PF10707_consen   20 HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELI   99 (199)
T ss_pred             CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEE
Confidence            3444455778776444               0112235566666555554      888999999999888888888865


Q ss_pred             C------CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC---C-
Q psy2674          74 D------WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---L-  143 (183)
Q Consensus        74 ~------~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~---~-  143 (183)
                      .      ..+|.+++...                .++. ...   ..+-.-.++|-++.|+.+|++|.||++...   . 
T Consensus       100 ~d~dG~~s~TL~~~l~~~----------------~~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~  159 (199)
T PF10707_consen  100 RDADGNISPTLEDYLKEG----------------GLTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEF  159 (199)
T ss_pred             ECCCCCcCccHHHHHHcC----------------CccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecCCCce
Confidence            3      35577777443                2444 222   223334578889999999999999999522   2 


Q ss_pred             ceEEec-ccCCCC
Q psy2674         144 SVKISL-SGLSKD  155 (183)
Q Consensus       144 ~~ki~d-fg~a~~  155 (183)
                      ...++| ||....
T Consensus       160 ~lvlIDG~G~~~~  172 (199)
T PF10707_consen  160 RLVLIDGLGEKEL  172 (199)
T ss_pred             EEEEEeCCCCccc
Confidence            566776 555543

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PLN02876 acyl-CoA dehydrogenase

Probab=98.07  E-value=7.1e-05  Score=63.69  Aligned_cols=59  Identities=20%  Similarity=0.333  Sum_probs=40.3

Q ss_pred             ceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-Ccce--eeEEeEEecC---CccEEEEeeCCCCC
Q psy2674          19 SVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHV--VKMIGICRDG---DPHYLLLEYTDWGD   77 (183)
Q Consensus        19 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i--~~~~~~~~~~---~~~~lv~e~~~~~~   77 (183)
                      ..+++|+............+.+|..+++.+. |.++  .+++.++.+.   +..+++||+++|..
T Consensus        66 ~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVME~v~G~~  130 (822)
T PLN02876         66 KRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIMEYLEGRI  130 (822)
T ss_pred             eeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEEEecCCcc
Confidence            4677777553322222346789999999984 6554  7778887764   46789999999654

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.95  E-value=0.00012  Score=52.40  Aligned_cols=70  Identities=20%  Similarity=0.296  Sum_probs=44.1

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-C-cceeeEEeEEec---CCccEEEEeeCCCCCHHH
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-H-AHVVKMIGICRD---GDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h-~~i~~~~~~~~~---~~~~~lv~e~~~~~~L~~   80 (183)
                      ..++|......  ..+++|.....   .....+.+|..+++.+. + ..+.+++.....   ....++++++++|.++..
T Consensus        10 ~n~~~~v~~~~--~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~   84 (239)
T PF01636_consen   10 SNRVYRVTTDD--GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDD   84 (239)
T ss_dssp             SSEEEEEEETT--SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHH
T ss_pred             eeeEEEEEECC--cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccc
Confidence            34566555444  48889886533   34457788888888873 2 234556654432   334689999999877777

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.77  E-value=0.00094  Score=48.34  Aligned_cols=33  Identities=18%  Similarity=0.062  Sum_probs=27.8

Q ss_pred             CCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      .+++|+|+.+.|++++......|+||+.+....
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~gD  196 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGVGD  196 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccCcCC
Confidence            358999999999999877767899999887543

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.73  E-value=0.00026  Score=51.88  Aligned_cols=32  Identities=19%  Similarity=0.165  Sum_probs=26.9

Q ss_pred             CceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674         126 RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .++|+|+.|.||+++.++ +.++||+.|....+
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~gdp  178 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYASDGDI  178 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccCcCCH
Confidence            579999999999998776 78999998875443

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>KOG0576|consensus

Probab=97.65  E-value=1.6e-05  Score=64.22  Aligned_cols=150  Identities=12%  Similarity=0.097  Sum_probs=100.7

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcc-eeeEEeEEecCCccEEEEeeCCCC-CHHHH
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAH-VVKMIGICRDGDPHYLLLEYTDWG-DLKQF   81 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~-i~~~~~~~~~~~~~~lv~e~~~~~-~L~~~   81 (183)
                      .+..+++|+++..+...+ .+.+...      ....-++++|.+++||| .+..++.+..++..++.+++++++ +-...
T Consensus       253 ~altknpKkRptaeklL~-h~fvs~~------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~  325 (829)
T KOG0576|consen  253 GALTKNPKKRPTAEKLLQ-HPFVSQT------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALE  325 (829)
T ss_pred             HHhcCCCccCCChhhhee-ceeeccc------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCcccccc
Confidence            345667777777776665 5555422      23455788999999999 777777777788899999998765 11111


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +....              -.+.+.........-..++.++|+..-+|+|    ||+. .+...+..+|+.......   
T Consensus       326 ~~~se--------------~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~-s~~~~~~~~~~v~~~L~~~~~  386 (829)
T KOG0576|consen  326 MTVSE--------------IALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG-SEEEVKLLDFAVPPQLTRTMK  386 (829)
T ss_pred             CChhh--------------HhhhhhhhhhhhhhhcccccccccccccCcc----cccc-cccccccccccCCcccCcccc
Confidence            11000              0133344555566667788899988778888    6655 447788899988765443   


Q ss_pred             -ccccceeeeeecccCCCcccc
Q psy2674         159 -KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~~~  179 (183)
                       +....++..++||+....++|
T Consensus       387 ~~t~~~~~~~~~pev~~~~~~~  408 (829)
T KOG0576|consen  387 PRTAIGTPEPLAPEVIQENTID  408 (829)
T ss_pred             cccCCCCCCCCCchhhcccccc
Confidence             355667888899988776664

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.59  E-value=0.0034  Score=45.30  Aligned_cols=34  Identities=21%  Similarity=0.215  Sum_probs=28.6

Q ss_pred             CCceecccccceeEecc-CCceEEecccCCCCCCc
Q psy2674         125 KRLIHKDIAARNCLISS-DLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~~  158 (183)
                      ..++|+|+.+.||+++. ++.+.++||..|.....
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~  204 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR  204 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch
Confidence            36899999999999987 57899999998874443

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=97.54  E-value=0.001  Score=50.29  Aligned_cols=142  Identities=18%  Similarity=0.206  Sum_probs=79.6

Q ss_pred             cceEEEeeccC-CCCHHHHHHHHHHHHHHhcCC--CcceeeEEeEEecCC--ccEEEEeeCCCC----------------
Q psy2674          18 TSVLMAKSLVH-SKDDEALHEFKREIDLFCKLD--HAHVVKMIGICRDGD--PHYLLLEYTDWG----------------   76 (183)
Q Consensus        18 ~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~--~~~lv~e~~~~~----------------   76 (183)
                      +++++++ .+. .......+...+|...++.+.  ....-..++.|.++.  ..+.+|+|++|.                
T Consensus        48 ~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~~~~~~~~~  126 (321)
T COG3173          48 GQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPPESLGRQFA  126 (321)
T ss_pred             CceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCcccchHHHH
Confidence            7777887 432 333344556778888888873  344556677777655  779999999861                


Q ss_pred             --CHHHHHHhhccCCC-CCCCCCCCCCCCCCHHHHHHHHH--------------HHHHHHHHHhc--------CCceecc
Q psy2674          77 --DLKQFLLATRKDSK-DKSGSGKPRVRSLSTSQAVTMAY--------------QVALGLEHISD--------KRLIHKD  131 (183)
Q Consensus        77 --~L~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------~i~~~l~~lh~--------~~ivH~d  131 (183)
                        +|.+.+..-+.... ......+...  ........+..              ....-..|+..        ..++|+|
T Consensus       127 ~~~l~~~La~LH~ida~~~~~~g~~~~--~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~~lvHGD  204 (321)
T COG3173         127 LDALADFLAELHSIDAAGLPDPGKPNA--YRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPPVLVHGD  204 (321)
T ss_pred             HHHHHHHHHHHhCCCCcCCCCCCccCc--cccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCceeeeCC
Confidence              11122222111111 1111111110  00111111111              11122344433        3589999


Q ss_pred             cccceeEeccCCceEEecccCCCCCCccccc
Q psy2674         132 IAARNCLISSDLSVKISLSGLSKDTYQKEYY  162 (183)
Q Consensus       132 i~~~nil~~~~~~~ki~dfg~a~~~~~~~~~  162 (183)
                      .++.|+++++..-+-+.||+++....+-..+
T Consensus       205 ~~~gNlii~~~~~~gVlDwe~~~lGDP~~Dl  235 (321)
T COG3173         205 YRPGNLIIDPGRPTGVLDWELATLGDPLEDL  235 (321)
T ss_pred             cccCCEEEeCCCeeEEEeccccccCCcHHHH
Confidence            9999999998888999999999876665433

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.49  E-value=0.0064  Score=45.85  Aligned_cols=31  Identities=19%  Similarity=0.191  Sum_probs=27.7

Q ss_pred             CCceecccccceeEeccCCceEEecccCCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      .+++|+|+++.|++++.++...++||+.+..
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~  217 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACT  217 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeecccccC
Confidence            5899999999999999888779999998853

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.46  E-value=0.0065  Score=45.45  Aligned_cols=32  Identities=19%  Similarity=0.164  Sum_probs=27.9

Q ss_pred             CCceecccccceeEeccCCceEEecccCCCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      .+++|+|+.|.|++++.++.+.|+||+.+...
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~g  206 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFACTD  206 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhcCc
Confidence            46899999999999998877899999987643

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK05231 homoserine kinase; Provisional

Probab=97.43  E-value=0.012  Score=44.58  Aligned_cols=31  Identities=19%  Similarity=0.174  Sum_probs=27.1

Q ss_pred             CCceecccccceeEeccCCceEEecccCCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      .+++|+|+.|.||+++.+....|+||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~  217 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFACN  217 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEecccccC
Confidence            3799999999999998776678999998863

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=97.36  E-value=0.00068  Score=51.92  Aligned_cols=72  Identities=17%  Similarity=0.260  Sum_probs=53.4

Q ss_pred             CCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCcccccceeeeeecccCCC
Q psy2674         103 LSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVICSNIAEG  175 (183)
Q Consensus       103 ~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~~~~~~~~~pe~~~~  175 (183)
                      ...+....++++....+.-+..+ .+-|||+...||+++ +|.+.|+||.+++...+.........--|-++.|
T Consensus       318 ~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~~~q~~isy~rldhp~lF~G  390 (488)
T COG5072         318 DRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLSYSQGIISYNRLDHPDLFNG  390 (488)
T ss_pred             ccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecccCCceeeccccCchhhhcC
Confidence            45677788888877766666654 688999999999998 9999999999999666655444444444444444

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.31  E-value=0.016  Score=45.34  Aligned_cols=68  Identities=13%  Similarity=0.040  Sum_probs=43.0

Q ss_pred             eeeeccCCCCcceEEEeeccCC-----C-CHHHHHHHHHHHHHHhcC-C--CcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           8 RGLKASDPQDTSVLMAKSLVHS-----K-DDEALHEFKREIDLFCKL-D--HAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         8 ~~~~~~~~~~~~~vavK~~~~~-----~-~~~~~~~~~~E~~~l~~l-~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      .||+......++.++||...+.     . .+...++...|.+.|+.+ +  ..++.+++.+  +++..+++|||+++..
T Consensus        41 ~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~lVME~L~~~~  117 (401)
T PRK09550         41 LVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVTVMEDLSDHK  117 (401)
T ss_pred             EEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEEEEecCCCcc
Confidence            3566666443368999985411     1 123445677788888876 2  2346666666  4566789999998543

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.27  E-value=0.0023  Score=44.18  Aligned_cols=118  Identities=11%  Similarity=0.070  Sum_probs=75.4

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCccee-eEEeEEecCCccEEEEeeCCCCCHHHHHHh
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVV-KMIGICRDGDPHYLLLEYTDWGDLKQFLLA   84 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~-~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   84 (183)
                      .+.||.+  ...+..+|+|+-...   ..+..+..|++++..++-.++. +++.+-    ...+.|||+.|.+|......
T Consensus        35 ~s~Vyl~--~~~~~~~a~Kvrr~d---s~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~~L~~~~~~  105 (201)
T COG2112          35 TSVVYLG--EWRGGEVALKVRRRD---SPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGRPLGKLEIG  105 (201)
T ss_pred             ccEEEEe--eccCceEEEEEecCC---cchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCcchhhhhhc
Confidence            3445543  345668899885433   2345788999999998755543 344443    23456999998888776642


Q ss_pred             hccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccc-cceeEeccCCceEEecccCCC
Q psy2674          85 TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA-ARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~-~~nil~~~~~~~ki~dfg~a~  154 (183)
                      .                  +    ..-...++..---|-..||-|+.++ |...++.+.+.+.|+||.-|+
T Consensus       106 ~------------------~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At  154 (201)
T COG2112         106 G------------------D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSAT  154 (201)
T ss_pred             c------------------c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchh
Confidence            1                  1    1122344555444566799998886 444455566699999999987

>KOG0606|consensus

Probab=97.19  E-value=4.3e-05  Score=64.73  Aligned_cols=131  Identities=18%  Similarity=0.150  Sum_probs=90.1

Q ss_pred             ceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHh
Q psy2674           7 ARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA   84 (183)
Q Consensus         7 ~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   84 (183)
                      +.++.+.....|...+.|+.....  ...+.+.+.++-++.-...+|.++..+-.+......+++++++.+++|.+.+..
T Consensus       818 ~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~~~Skl~~  897 (1205)
T KOG0606|consen  818 SSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGDLPSKLHN  897 (1205)
T ss_pred             cccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCCchhhhhc
Confidence            344444555555444444432111  111122333344444444566666655555566788999999999999998877


Q ss_pred             hccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          85 TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      .+               ..+.+..+.+...+..+.++||...+.|+|++|.|.++...+..++.+|+.
T Consensus       898 ~~---------------~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t  950 (1205)
T KOG0606|consen  898 SG---------------CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGT  950 (1205)
T ss_pred             CC---------------CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccc
Confidence            64               356666777778899999999999999999999999999999999999974

>PRK10593 hypothetical protein; Provisional

Probab=97.18  E-value=0.024  Score=42.65  Aligned_cols=56  Identities=16%  Similarity=0.062  Sum_probs=38.6

Q ss_pred             eEEEeeccCCCCHHHHHHHHHHHHHHhcCC-C--cceeeEEeEEec---CCccEEEEeeCCCCCH
Q psy2674          20 VLMAKSLVHSKDDEALHEFKREIDLFCKLD-H--AHVVKMIGICRD---GDPHYLLLEYTDWGDL   78 (183)
Q Consensus        20 ~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h--~~i~~~~~~~~~---~~~~~lv~e~~~~~~L   78 (183)
                      .+.+|........   ..+..|...++.+. .  ..+.++++.+.+   .+..+++||++++.++
T Consensus        39 ~~~~k~~~~~~~~---~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~  100 (297)
T PRK10593         39 NPMPLMARSFSTP---GVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV  100 (297)
T ss_pred             CEEEEEecccccc---hHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence            4666774331122   36888999999883 2  467788887754   3668999999997654

>KOG2270|consensus

Probab=96.65  E-value=0.027  Score=43.66  Aligned_cols=136  Identities=24%  Similarity=0.177  Sum_probs=81.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC----C-------------------CH-H-HHHHHHHHHHHHhcCCCcceeeE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS----K-------------------DD-E-ALHEFKREIDLFCKLDHAHVVKM   56 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~----~-------------------~~-~-~~~~~~~E~~~l~~l~h~~i~~~   56 (183)
                      |+--.|.||.+.. .+|..+|+|+.+.+    +                   ++ . ..-....|+.-|+.++...|..-
T Consensus       153 STGKEANVYHat~-~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP~P  231 (520)
T KOG2270|consen  153 STGKEANVYHATE-EDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIPCP  231 (520)
T ss_pred             ccCccceeEeeec-CCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence            4456778887654 56777999998632    0                   11 1 11123456666666644333211


Q ss_pred             EeEEecCCccEEEEeeCCCCCH-HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCceeccccc
Q psy2674          57 IGICRDGDPHYLLLEYTDWGDL-KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS-DKRLIHKDIAA  134 (183)
Q Consensus        57 ~~~~~~~~~~~lv~e~~~~~~L-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~ivH~di~~  134 (183)
                      --...  ....|||++++...- .-.+                ....++...+..+..+++.-+.-|. ..++||.||+-
T Consensus       232 ePIlL--k~hVLVM~FlGrdgw~aPkL----------------Kd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSE  293 (520)
T KOG2270|consen  232 EPILL--KNHVLVMEFLGRDGWAAPKL----------------KDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSE  293 (520)
T ss_pred             Cceee--ecceEeeeeccCCCCcCccc----------------ccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhh
Confidence            11111  124688998762110 0111                1123555566677777777776665 45999999999


Q ss_pred             ceeEeccCCceEEecccCCCCCC
Q psy2674         135 RNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus       135 ~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      -|+|+ .+|.+.|+|.+.+....
T Consensus       294 fN~Ly-hdG~lyiIDVSQSVE~D  315 (520)
T KOG2270|consen  294 FNLLY-HDGKLYIIDVSQSVEHD  315 (520)
T ss_pred             hhheE-ECCEEEEEEccccccCC
Confidence            99999 77899999999887543

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=96.56  E-value=0.013  Score=42.15  Aligned_cols=37  Identities=14%  Similarity=0.048  Sum_probs=30.7

Q ss_pred             HHHHHHHhc--CCceecccccceeEeccCCceEEecccC
Q psy2674         116 ALGLEHISD--KRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus       116 ~~~l~~lh~--~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      +.++.-.|+  .+.+|+|..|+|||.|..|.+|+.|=+.
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence            445666773  4799999999999999999999999653

The function of this family is unknown.

>KOG2137|consensus

Probab=96.45  E-value=0.0019  Score=52.82  Aligned_cols=64  Identities=14%  Similarity=0.180  Sum_probs=51.1

Q ss_pred             HHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCccccc--------------ceeeeeecccCCC
Q psy2674         112 AYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY--------------KYRWVICSNIAEG  175 (183)
Q Consensus       112 ~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~~~--------------~~~~~~~pe~~~~  175 (183)
                      +.++..|+.|+|.. ++||++|.|++|.++.++.+|++.|+++........+              ...-|.+||.+.+
T Consensus       105 l~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  105 LGNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             hhcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            44566899999976 8999999999999999999999999998866553212              1346788888765

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=96.42  E-value=0.008  Score=47.09  Aligned_cols=100  Identities=9%  Similarity=0.036  Sum_probs=69.5

Q ss_pred             cEEEEeeCCCCC-HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc
Q psy2674          66 HYLLLEYTDWGD-LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS  144 (183)
Q Consensus        66 ~~lv~e~~~~~~-L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~  144 (183)
                      ..++|+.+.+.. ...+++-..+ .        -..+...+...+.....++.+...||..|.+-+|+.++|+|+++.+.
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tR-R--------qs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~  155 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATR-R--------QSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSK  155 (637)
T ss_pred             eEEecccCCCccchhhhcCchhh-c--------ccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCce
Confidence            667888777543 2232221111 0        01124677888999999999999999999999999999999999999


Q ss_pred             eEEecccCCC-CCCcc---cccceeeeeecccCC
Q psy2674         145 VKISLSGLSK-DTYQK---EYYKYRWVICSNIAE  174 (183)
Q Consensus       145 ~ki~dfg~a~-~~~~~---~~~~~~~~~~pe~~~  174 (183)
                      +.+.|-..-. .....   .-.+...|.|||...
T Consensus       156 V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~  189 (637)
T COG4248         156 VVLVDSDSFQINANGTLHLCPVGVSEFTPPELQT  189 (637)
T ss_pred             EEEEcccceeeccCCceEecccCccccCCHHHhc
Confidence            9999843322 11222   234577899999865

>KOG2268|consensus

Probab=96.24  E-value=0.0042  Score=47.16  Aligned_cols=93  Identities=18%  Similarity=0.161  Sum_probs=65.8

Q ss_pred             HHHHHHHHHhcCCC-c-ceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q psy2674          37 EFKREIDLFCKLDH-A-HVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQ  114 (183)
Q Consensus        37 ~~~~E~~~l~~l~h-~-~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  114 (183)
                      ...+|...++.+.. . -+.+.++    .+..+++||.+.|.+|.+.....                     ....+...
T Consensus       156 aa~kEfafmkaL~e~gfpVPkpiD----~~RH~Vvmelv~g~Pl~~v~~v~---------------------d~~~ly~~  210 (465)
T KOG2268|consen  156 AATKEFAFMKALYERGFPVPKPID----HNRHCVVMELVDGYPLRQVRHVE---------------------DPPTLYDD  210 (465)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCccc----ccceeeHHHhhcccceeeeeecC---------------------ChHHHHHH
Confidence            34567888887742 2 2333333    35668999999988876644221                     22334455


Q ss_pred             HHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674         115 VALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus       115 i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +..-|--|..+|+||+|..-=||+++.+..+.++||=...
T Consensus       211 lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~vIDFPQmv  250 (465)
T KOG2268|consen  211 LMGLIVRLANHGLIHGDFNEFNIMVKDDDKIVVIDFPQMV  250 (465)
T ss_pred             HHHHHHHHHHcCceecccchheeEEecCCCEEEeechHhh
Confidence            6666778899999999999999999999999999996544

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=96.23  E-value=0.073  Score=37.69  Aligned_cols=37  Identities=19%  Similarity=0.154  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674         112 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus       112 ~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      +.+|++-+..+|..||+-+|+++.|..     .-+|+|||.+
T Consensus       170 ~~~~~~dl~~~~k~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  170 IPQMLRDLKILHKLGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHHHHHCCeeeccCcccccc-----CCEEEecccC
Confidence            456777789999999999999999985     3478898865

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.16  E-value=0.19  Score=39.61  Aligned_cols=30  Identities=13%  Similarity=0.317  Sum_probs=24.9

Q ss_pred             cCCceecccccceeEeccCCceEEecccCCC
Q psy2674         124 DKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus       124 ~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      ...++|+|+.+.||+++.++ .+++|..++.
T Consensus       229 ~~~L~HGDl~~g~i~~~~~~-~~~id~ef~~  258 (418)
T PLN02756        229 AQALVHGDLHTGSVMVTPDS-TQVIDPEFAF  258 (418)
T ss_pred             ccceeecCCCCCcEEEcCCC-ceEecchhhc
Confidence            34789999999999997764 8888877665

>PRK06148 hypothetical protein; Provisional

Probab=95.99  E-value=0.35  Score=42.74  Aligned_cols=31  Identities=23%  Similarity=0.217  Sum_probs=25.7

Q ss_pred             CCceecccccceeEeccCC---ceEEecccCCCC
Q psy2674         125 KRLIHKDIAARNCLISSDL---SVKISLSGLSKD  155 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~---~~ki~dfg~a~~  155 (183)
                      .++||+|+.+.||+++.+.   ..-|+|||.+..
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            4699999999999998764   355999998863

>KOG1035|consensus

Probab=95.72  E-value=0.063  Score=47.13  Aligned_cols=127  Identities=15%  Similarity=0.070  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHHhcCCCcceeeEEeEEecCCc----cEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHH
Q psy2674          34 ALHEFKREIDLFCKLDHAHVVKMIGICRDGDP----HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAV  109 (183)
Q Consensus        34 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (183)
                      ......-|.+.+.+..|+|+..++.+-...-.    ..+..+++..-++.+.+....               .++..+.+
T Consensus       225 ~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~---------------~i~~~~~r  289 (1351)
T KOG1035|consen  225 EIQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG---------------SIPLETLR  289 (1351)
T ss_pred             HHHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc---------------ccCHHHHH
Confidence            33445567778888899999999888654321    234556777777888777664               47889999


Q ss_pred             HHHHHHHHHHHHHhcCCceecccccc---eeEeccCCceEEe--cccCCCCCCcccc----cceeeeeecccCCC
Q psy2674         110 TMAYQVALGLEHISDKRLIHKDIAAR---NCLISSDLSVKIS--LSGLSKDTYQKEY----YKYRWVICSNIAEG  175 (183)
Q Consensus       110 ~~~~~i~~~l~~lh~~~ivH~di~~~---nil~~~~~~~ki~--dfg~a~~~~~~~~----~~~~~~~~pe~~~~  175 (183)
                      .+..+...|+.++|+....|.-+..+   +.-.+..+.+.++  ||+.+........    .....+.++|...-
T Consensus       290 ~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~  364 (1351)
T KOG1035|consen  290 ILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKE  364 (1351)
T ss_pred             HHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCcccccccccccc
Confidence            99999999999999997777666665   4444566777777  8888775554322    22334445555443

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=95.64  E-value=0.09  Score=39.42  Aligned_cols=57  Identities=26%  Similarity=0.314  Sum_probs=35.3

Q ss_pred             CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC---CCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674          16 QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL---DHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus        16 ~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      .+++.+.+|+-....    ..++..|.+.|+.+   ....+.+++++....+..++++||++.+
T Consensus        38 ~~~~~~FvK~~~~~~----~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l~~~   97 (288)
T PF03881_consen   38 TDGGSYFVKVNSESG----RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFLEMG   97 (288)
T ss_dssp             TTS-EEEEEEEEGGG----CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE-----
T ss_pred             CCCccEEEEecChhh----HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEeecCC
Confidence            678889999866221    23677788888877   3455778888887777789999998754

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=95.53  E-value=0.013  Score=44.02  Aligned_cols=33  Identities=15%  Similarity=0.197  Sum_probs=28.1

Q ss_pred             CceecccccceeEeccC----CceEEecccCCCCCCc
Q psy2674         126 RLIHKDIAARNCLISSD----LSVKISLSGLSKDTYQ  158 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~----~~~ki~dfg~a~~~~~  158 (183)
                      .++|+|+.+.||+++.+    +.+.++||+.|.....
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p  216 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYR  216 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCc
Confidence            57999999999999874    8899999999875443

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK10271 thiK thiamine kinase; Provisional

Probab=95.31  E-value=0.017  Score=40.34  Aligned_cols=32  Identities=19%  Similarity=0.111  Sum_probs=26.8

Q ss_pred             CceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674         126 RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ...|+|+.|.|+++++++ ++++||+.|....+
T Consensus        78 ~p~H~D~~~~N~~~~~~~-~~lIDwe~a~~gDp  109 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG-LRLIDWEYAGDGDI  109 (188)
T ss_pred             eeecCCCCCccEEEECCC-EEEEeCCcccCCCH
Confidence            358999999999997776 88999999875544

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=95.29  E-value=0.05  Score=40.93  Aligned_cols=30  Identities=20%  Similarity=0.163  Sum_probs=25.9

Q ss_pred             CCceecccccceeEeccCCceEEecccCCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      .+++|+|+.+.|++++. +.+.++||+.+..
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~~  216 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCTI  216 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECccccc
Confidence            47899999999999987 6789999997753

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=95.19  E-value=0.59  Score=34.11  Aligned_cols=70  Identities=29%  Similarity=0.289  Sum_probs=45.3

Q ss_pred             CceeeeccCCC-CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC---CcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           6 NARGLKASDPQ-DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD---HAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         6 ~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      .+++--|.... ...++.+|.=    .......+..|+.-|..+.   ...+.+++.+....++.|+|+||++-+.+.
T Consensus        26 gG~inea~~v~dg~~~~FvK~n----~~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~d   99 (286)
T COG3001          26 GGDINEAWRLRDGTDPFFVKCN----QREQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPLD   99 (286)
T ss_pred             CccccceeEeecCCcceEEEec----chhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCCC
Confidence            33343333333 3456777762    2333457788888777763   356777788888888999999999854443

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=94.93  E-value=0.019  Score=40.76  Aligned_cols=30  Identities=27%  Similarity=0.242  Sum_probs=21.4

Q ss_pred             CceecccccceeEe-ccCCceEEecccCCCC
Q psy2674         126 RLIHKDIAARNCLI-SSDLSVKISLSGLSKD  155 (183)
Q Consensus       126 ~ivH~di~~~nil~-~~~~~~ki~dfg~a~~  155 (183)
                      .+.|+|+.+.||++ +.++.++++||..|..
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence            46899999999999 8899999999998873

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=94.57  E-value=0.032  Score=39.27  Aligned_cols=35  Identities=26%  Similarity=0.096  Sum_probs=28.4

Q ss_pred             cCCceecccccceeEeccCC-----ceEEecccCCCCCCc
Q psy2674         124 DKRLIHKDIAARNCLISSDL-----SVKISLSGLSKDTYQ  158 (183)
Q Consensus       124 ~~~ivH~di~~~nil~~~~~-----~~ki~dfg~a~~~~~  158 (183)
                      ...++|+|+.+.|+++..++     .+.++||..+....+
T Consensus       119 ~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p  158 (196)
T smart00587      119 FNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSP  158 (196)
T ss_pred             ceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCCh
Confidence            34689999999999997543     689999999885554

subfamily of choline kinases

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=94.47  E-value=0.075  Score=40.64  Aligned_cols=28  Identities=21%  Similarity=0.204  Sum_probs=25.6

Q ss_pred             ceecccccceeEeccCC-ceEEecccCCC
Q psy2674         127 LIHKDIAARNCLISSDL-SVKISLSGLSK  154 (183)
Q Consensus       127 ivH~di~~~nil~~~~~-~~ki~dfg~a~  154 (183)
                      ++|+|+.|.||+++.+. .+.++||+.+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            89999999999998777 49999999886

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=94.46  E-value=0.031  Score=41.57  Aligned_cols=33  Identities=21%  Similarity=0.136  Sum_probs=27.1

Q ss_pred             CceecccccceeEeccCC-ceEEecccCCCCCCc
Q psy2674         126 RLIHKDIAARNCLISSDL-SVKISLSGLSKDTYQ  158 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~~-~~ki~dfg~a~~~~~  158 (183)
                      .++|+|++|.||++++++ ..-|+||+.+....+
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iGDP  219 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVGDP  219 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhcccCCH
Confidence            589999999999998744 467999999876544

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PTZ00384 choline kinase; Provisional

Probab=94.15  E-value=0.28  Score=38.35  Aligned_cols=31  Identities=13%  Similarity=-0.007  Sum_probs=25.2

Q ss_pred             CCceecccccceeEeccCCceEEecccCCCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      ..+.|.|+.+.||+.+ +..++++||..|...
T Consensus       227 ~VfCHNDL~~gNIL~~-~~~l~lID~EYA~~n  257 (383)
T PTZ00384        227 VLFCHNDLFFTNILDF-NQGIYFIDFDFAGFN  257 (383)
T ss_pred             eeeeeccCCcccEEec-CCCEEEEEeccccCC
Confidence            3568999999999975 456999999888743

>PLN02236 choline kinase

Probab=93.94  E-value=0.11  Score=39.95  Aligned_cols=33  Identities=15%  Similarity=0.132  Sum_probs=27.9

Q ss_pred             CceecccccceeEecc-CCceEEecccCCCCCCc
Q psy2674         126 RLIHKDIAARNCLISS-DLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       126 ~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~~  158 (183)
                      .++|+|+++.||++++ ++.+.++||..|.....
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~  234 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYASYNPV  234 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhccccch
Confidence            5799999999999976 47899999999875443

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=93.75  E-value=0.043  Score=41.45  Aligned_cols=32  Identities=9%  Similarity=-0.038  Sum_probs=28.7

Q ss_pred             CceecccccceeEeccCCceEEecccCCCCCC
Q psy2674         126 RLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      +++|+|+.+.|++++.++.+.++||..+....
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~d~  228 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKASFAS  228 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhcccCC
Confidence            78999999999999999899999999887444

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=93.56  E-value=0.19  Score=37.34  Aligned_cols=31  Identities=13%  Similarity=0.039  Sum_probs=27.8

Q ss_pred             CceecccccceeEeccCCceEEecccCCCCC
Q psy2674         126 RLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      -++|+|+.|.|++.++.+.++++||.-|...
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg~~  184 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDWEYAGLN  184 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEecccCCCc
Confidence            5789999999999999999999999888643

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=93.15  E-value=0.058  Score=45.29  Aligned_cols=51  Identities=6%  Similarity=-0.055  Sum_probs=36.0

Q ss_pred             ecccccc-eeEeccCCceEEecccCCCCCCc-------ccccceeeeeecccCCCcccc
Q psy2674         129 HKDIAAR-NCLISSDLSVKISLSGLSKDTYQ-------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       129 H~di~~~-nil~~~~~~~ki~dfg~a~~~~~-------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +++..|. |++++..+..++.||+.+.....       ....+|++|+|||++.+.+|+
T Consensus       500 ~~~~~p~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~  558 (669)
T cd05610         500 TQKPRPHGNLYQTPKQVKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHG  558 (669)
T ss_pred             CCCCCCCCceeECCccccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCC
Confidence            3444555 55666777778888988764322       345789999999999887764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1290|consensus

Probab=92.16  E-value=0.064  Score=42.69  Aligned_cols=39  Identities=21%  Similarity=0.091  Sum_probs=28.9

Q ss_pred             cCCceEEecccCCCCCC--cccccceeeeeecccCCCcccc
Q psy2674         141 SDLSVKISLSGLSKDTY--QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       141 ~~~~~ki~dfg~a~~~~--~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .+-++||+|||-|=-..  -.....|+.|+|||++.|.+|.
T Consensus       389 ~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~  429 (590)
T KOG1290|consen  389 CDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYS  429 (590)
T ss_pred             cceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCC
Confidence            34679999999874211  1245679999999999998774

>PRK06149 hypothetical protein; Provisional

Probab=92.02  E-value=0.23  Score=43.69  Aligned_cols=31  Identities=23%  Similarity=0.100  Sum_probs=25.2

Q ss_pred             cCCceecccccceeEeccC-----CceEEecccCCC
Q psy2674         124 DKRLIHKDIAARNCLISSD-----LSVKISLSGLSK  154 (183)
Q Consensus       124 ~~~ivH~di~~~nil~~~~-----~~~ki~dfg~a~  154 (183)
                      ..++||+|+.+.||+++.+     ....|+|||.+.
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            3579999999999999854     225899999875

>PRK12396 5-methylribose kinase; Reviewed

Probab=91.97  E-value=0.24  Score=38.91  Aligned_cols=64  Identities=14%  Similarity=0.071  Sum_probs=39.4

Q ss_pred             eeeccCCCCcceEEEeecc-----CCCCHHHHHHHHHHHHHHhcCC--Cc-ceeeEEeEEecCCccEEEEeeCC
Q psy2674           9 GLKASDPQDTSVLMAKSLV-----HSKDDEALHEFKREIDLFCKLD--HA-HVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         9 ~~~~~~~~~~~~vavK~~~-----~~~~~~~~~~~~~E~~~l~~l~--h~-~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      ||+..+...++.++||...     ....+-..++...|.+.|+...  .| .+.+++.+  ++....++||+++
T Consensus        45 VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~vMEdL~  116 (409)
T PRK12396         45 VFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCVMEDLS  116 (409)
T ss_pred             EEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHHHHhCc
Confidence            6666654345678888854     1223444556777778787762  34 34445554  4556678888875

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	183
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-24
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-22
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		3e-22
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		2e-21
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		3e-21
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		3e-21
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		2e-18
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-18
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-18
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		2e-18
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-18
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-18
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-18
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-18
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-18
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		5e-18
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		8e-18
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		9e-18
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-17
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		2e-17
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		2e-17
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		2e-17
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		2e-17
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-17
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		2e-17
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		2e-17
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		3e-17
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		3e-17
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		3e-17
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		4e-17
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		9e-17
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-16
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-15
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		1e-15
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-15
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		2e-15
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-15
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-15
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		2e-15
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		5e-15
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		6e-15
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		6e-15
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		6e-15
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-15
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		6e-15
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		6e-15
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		7e-15
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		7e-15
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		7e-15
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		7e-15
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		8e-15
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		8e-15
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-15
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		8e-15
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		8e-15
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-14
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-14
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		1e-14
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-14
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-14
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		1e-14
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-14
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-14
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-14
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-14
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-14
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		2e-14
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		2e-14
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		2e-14
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		2e-14
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-14
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-14
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		3e-14
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-14
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		3e-14
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-14
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		3e-14
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		3e-14
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-14
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-14
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-14
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		4e-14
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-14
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		4e-14
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		4e-14
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		5e-14
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		6e-14
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		1e-13
1fvr_A	327	Tie2 Kinase Domain Length = 327		1e-13
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		1e-13
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		2e-13
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-13
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-13
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		3e-13
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-13
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		4e-13
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-13
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		4e-13
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-13
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		4e-13
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		4e-13
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		5e-13
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		5e-13
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		5e-13
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		9e-13
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		9e-13
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		1e-12
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-12
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-12
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-12
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-12
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-12
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-12
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-12
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-12
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-12
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-12
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-12
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-12
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-12
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		2e-12
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-12
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		2e-12
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-12
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		2e-12
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		3e-12
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-12
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		4e-12
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		4e-12
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		4e-12
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		4e-12
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		4e-12
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		4e-12
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		4e-12
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		4e-12
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-12
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-12
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-12
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		5e-12
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-12
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		5e-12
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		5e-12
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		6e-12
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		6e-12
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		6e-12
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		7e-12
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-12
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-12
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		1e-11
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-11
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-11
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-11
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-11
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-11
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-11
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		2e-11
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		2e-11
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		3e-11
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		4e-11
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		4e-11
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		4e-11
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		5e-11
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		5e-11
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		5e-11
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		5e-11
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		5e-11
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		5e-11
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		5e-11
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		6e-11
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		6e-11
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		7e-11
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		7e-11
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		8e-11
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		8e-11
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		8e-11
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		8e-11
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-11
4fl3_A	635	Structural And Biophysical Characterization Of The		9e-11
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		9e-11
4fl2_A	636	Structural And Biophysical Characterization Of The		9e-11
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		9e-11
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-11
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		9e-11
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		9e-11
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		9e-11
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		1e-10
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-10
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		1e-10
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-10
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		2e-10
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		2e-10
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		3e-10
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		3e-10
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		5e-10
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		5e-10
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		5e-10
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		5e-10
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		5e-10
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-10
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-10
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		5e-10
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-10
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-10
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		5e-10
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		5e-10
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		5e-10
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		8e-10
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		8e-10
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		9e-10
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		9e-10
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-10
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-09
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-09
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-09
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-09
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		1e-09
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-09
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-09
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		1e-09
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		1e-09
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-09
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-09
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-09
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-09
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-09
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-09
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		2e-09
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-09
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-09
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-09
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-09
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-09
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		3e-09
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-09
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		4e-09
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		4e-09
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		4e-09
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-09
2pl0_A	289	Lck Bound To Imatinib Length = 289		4e-09
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-09
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		5e-09
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		5e-09
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		5e-09
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-09
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		7e-09
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		9e-09
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		9e-09
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-08
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-08
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-08
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-08
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-08
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-08
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-08
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		2e-08
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		3e-08
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-08
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		3e-08
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-08
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		3e-08
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		3e-08
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		3e-08
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		3e-08
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-08
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		5e-08
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		5e-08
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		7e-08
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		7e-08
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		8e-08
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		8e-08
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		8e-08
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		8e-08
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		8e-08
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		8e-08
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		8e-08
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		8e-08
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		8e-08
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		9e-08
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		9e-08
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		9e-08
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-07
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-07
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-07
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		2e-07
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		2e-07
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		2e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		3e-07
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		4e-07
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-07
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		4e-07
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		4e-07
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-07
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		4e-07
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-07
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		4e-07
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		5e-07
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		5e-07
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		5e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		5e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		6e-07
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		6e-07
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		6e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		6e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-07
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-07
3a4o_X	286	Lyn Kinase Domain Length = 286		6e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		6e-07
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		6e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		6e-07
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		6e-07
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		7e-07
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		7e-07
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		7e-07
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		7e-07
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		7e-07
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		7e-07
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		7e-07
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		7e-07
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		7e-07
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		7e-07
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		7e-07
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		7e-07
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		7e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		7e-07
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		7e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		7e-07
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		7e-07
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		7e-07
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		7e-07
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		7e-07
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		7e-07
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		7e-07
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		7e-07
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		8e-07
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		8e-07
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		8e-07
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		9e-07
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		9e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		9e-07
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		9e-07
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		9e-07
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-07
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		9e-07
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		9e-07
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		9e-07
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		9e-07
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		9e-07
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-06
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-06
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-06
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		1e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-06
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-06
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		1e-06
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		1e-06
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-06
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		1e-06
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		1e-06
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-06
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		1e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-06
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-06
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-06
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-06
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		2e-06
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-06
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-06
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		2e-06
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-06
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		2e-06
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-06
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-06
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		3e-06
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		3e-06
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-06
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		6e-06
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		7e-06
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		8e-06
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		8e-06
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		8e-06
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		8e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		8e-06
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		8e-06
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		8e-06
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-06
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		8e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		8e-06
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		8e-06
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-06
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		9e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		9e-06
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		9e-06
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		9e-06
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		9e-06
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		9e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		9e-06
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		9e-06
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		9e-06
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		9e-06
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		9e-06
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		9e-06
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		9e-06
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-05
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-05
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-05
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-05
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		1e-05
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-05
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		1e-05
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		1e-05
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-05
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-05
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-05
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-05
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		2e-05
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-05
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		2e-05
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-05
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-05
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-05
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		2e-05
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		3e-05
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		3e-05
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-05
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		3e-05
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		3e-05
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		3e-05
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		3e-05
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		3e-05
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		3e-05
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-05
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		3e-05
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		3e-05
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		3e-05
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-05
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		3e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		3e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		3e-05
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		4e-05
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		4e-05
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		6e-05
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		6e-05
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		7e-05
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		7e-05
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		8e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		9e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		9e-05
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		9e-05
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		9e-05
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		9e-05
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-04
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-04
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		1e-04
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		1e-04
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		1e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		1e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		2e-04
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-04
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-04
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		2e-04
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-04
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-04
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-04
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		2e-04
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		2e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		2e-04
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		2e-04
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-04
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		2e-04
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-04
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		2e-04
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		2e-04
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		2e-04
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-04
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-04
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		2e-04
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-04
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		2e-04
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		3e-04
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		3e-04
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-04
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		3e-04
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		3e-04
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-04
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-04
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		4e-04
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		4e-04
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		5e-04
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		6e-04
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		8e-04
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		8e-04
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		8e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		9e-04
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		9e-04
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		9e-04

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score =  108 bits (269), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 2/149 (1%)
Query: 15  PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           P+   +L+A   +    D A  +F RE +L   L H H+VK  G+C +GDP  ++ EY  
Sbjct: 39  PEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK 98
Query: 75  WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            GDL +FL A             P    L+ SQ + +A Q+A G+ +++ +  +H+D+A 
Sbjct: 99  HGDLNKFLRAHGPDAVLMAEGNPP--TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLAT 156
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           RNCL+  +L VKI   G+S+D Y  +YY+
Sbjct: 157 RNCLVGENLLVKIGDFGMSRDVYSTDYYR 185

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Query: 15  PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           P    +L+A   +      A  +F+RE +L   L H H+VK  G+C DGDP  ++ EY  
Sbjct: 41  PTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMK 100
Query: 75  WGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
            GDL +FL A              + +  L  SQ + +A Q+A G+ +++ +  +H+D+A
Sbjct: 101 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLA 160
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
            RNCL+ ++L VKI   G+S+D Y  +YY+
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYSTDYYR 190

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score =  101 bits (251), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 92/172 (53%), Gaps = 23/172 (13%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A GL   +P   +++  K L      +   +F+RE  L  + D+ ++VK++G+C  G P 
Sbjct: 68  APGLLPYEP--FTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125
Query: 67  YLLLEYTDWGDLKQFL---------------LATRXXXXXXXXXXXPRVRSLSTSQAVTM 111
            LL EY  +GDL +FL               L+TR           P    LS ++ + +
Sbjct: 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS------PGPPPLSCAEQLCI 179
Query: 112 AYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           A QVA G+ ++S+++ +H+D+A RNCL+  ++ VKI+  GLS++ Y  +YYK
Sbjct: 180 ARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 98.2 bits (243), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 15  PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           P+   +L+A   +    + A  +F+RE +L   L H H+V+  G+C +G P  ++ EY  
Sbjct: 67  PEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR 126
Query: 75  WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            GDL +FL +                  L   Q + +A QVA G+ +++    +H+D+A 
Sbjct: 127 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 186
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           RNCL+   L VKI   G+S+D Y  +YY+
Sbjct: 187 RNCLVGQGLVVKIGDFGMSRDIYSTDYYR 215

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 15  PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           P+   +L+A   +    + A  +F+RE +L   L H H+V+  G+C +G P  ++ EY  
Sbjct: 38  PEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR 97
Query: 75  WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            GDL +FL +                  L   Q + +A QVA G+ +++    +H+D+A 
Sbjct: 98  HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 157
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           RNCL+   L VKI   G+S+D Y  +YY+
Sbjct: 158 RNCLVGQGLVVKIGDFGMSRDIYSTDYYR 186

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 97.8 bits (242), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 15  PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD 74
           P+   +L+A   +    + A  +F+RE +L   L H H+V+  G+C +G P  ++ EY  
Sbjct: 44  PEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMR 103
Query: 75  WGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            GDL +FL +                  L   Q + +A QVA G+ +++    +H+D+A 
Sbjct: 104 HGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLAT 163
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           RNCL+   L VKI   G+S+D Y  +YY+
Sbjct: 164 RNCLVGQGLVVKIGDFGMSRDIYSTDYYR 192

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 39  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 96
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 97  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 151
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D Y+ +YY+         RW+   ++ +G   
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 208
Query: 179 NVFKT 183
            VF T
Sbjct: 209 -VFTT 212

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +  + +  HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 74  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P     S S+ + MA ++A G+ +++  + +H+D+AARNC+++ D +VKI   G+++D 
Sbjct: 134 PP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
           Y+ +YY+         RW+   ++ +G    VF T
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDG----VFTT 219

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 68  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 125
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 126 LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 180
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D Y+ +YY+         RW+   ++ +G   
Sbjct: 181 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 237
Query: 179 NVFKT 183
            VF T
Sbjct: 238 -VFTT 241

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 36  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 93
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 94  LVIMELMTRGDLKSYLRSLRPAMANNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 148
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D Y+ +YY+         RW+   ++ +G   
Sbjct: 149 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 205
Query: 179 NVFKT 183
            VF T
Sbjct: 206 -VFTT 209

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 37  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 94
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 95  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 149
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D Y+ +YY+         RW+   ++ +G   
Sbjct: 150 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 206
Query: 179 NVFKT 183
            VF T
Sbjct: 207 -VFTT 210

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 88.6 bits (218), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 39  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 96
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 97  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 151
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D Y+ +YY+         RW+   ++ +G   
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 208
Query: 179 NVFKT 183
            VF T
Sbjct: 209 -VFTT 212

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 33  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 90
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 91  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 145
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D Y+ +YY+         RW+   ++ +G   
Sbjct: 146 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 202
Query: 179 NVFKT 183
            VF T
Sbjct: 203 -VFTT 206

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 83/155 (53%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +  + +  HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 74  EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLA 133
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P     S S+ + MA ++A G+ +++  + +H+D+AARNC+++ D +VKI   G+++D 
Sbjct: 134 PP-----SLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
           Y+ +YY+         RW+   ++ +G    VF T
Sbjct: 189 YETDYYRKGGKGLLPVRWMSPESLKDG----VFTT 219

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 88.2 bits (217), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 95/185 (51%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 40  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 97
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 98  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 152
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D Y+ +YY+         RW+   ++ +G   
Sbjct: 153 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 209
Query: 179 NVFKT 183
            VF T
Sbjct: 210 -VFTT 213

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 87.0 bits (214), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 33  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 90
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 91  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 145
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAEGRRL 178
            +H+D+AARNC ++ D +VKI   G+++D Y+ +YY+         RW+   ++ +G   
Sbjct: 146 FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--- 202
Query: 179 NVFKT 183
            VF T
Sbjct: 203 -VFTT 206

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 86.3 bits (212), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +       HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 65  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 124
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++ +     + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI   G+++D 
Sbjct: 125 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 179
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
           Y+ +YY+         RW+   ++ +G    VF T
Sbjct: 180 YETDYYRKGGKGLLPVRWMAPESLKDG----VFTT 210

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 86.3 bits (212), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 83/156 (53%), Gaps = 9/156 (5%)
Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
           + +  K L  +     L +   E ++  +++H HV+K+ G C    P  L++EY  +G L
Sbjct: 54  TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 79  KQFLLATRXXXXXXXXXXX---------PRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           + FL  +R                    P  R+L+    ++ A+Q++ G++++++ +L+H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           +D+AARN L++    +KIS  GLS+D Y+++ Y  R
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKR 209

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 85.9 bits (211), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +       HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 66  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++ +     + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI   G+++D 
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
           Y+ +YY+         RW+   ++ +G    VF T
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDG----VFTT 211

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +       HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 66  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++ +     + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI   G+++D 
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
           Y+  YY+         RW+   ++ +G    VF T
Sbjct: 181 YETAYYRKGGKGLLPVRWMAPESLKDG----VFTT 211

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 37  VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 96
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R             P    LS+   V+ AYQVA G+
Sbjct: 97  QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 155
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 156 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 199

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 45  VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 104
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R             P    LS+   V+ AYQVA G+
Sbjct: 105 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 163
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 86  VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 145
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R             P    LS+   V+ AYQVA G+
Sbjct: 146 QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 204
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 205 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 85.1 bits (209), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 38  VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 97
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R             P    LS+   V+ AYQVA G+
Sbjct: 98  QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 156
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 157 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 200

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 30  VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 89
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXX--XXXXXPRVRSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R             P    LS+   V+ AYQVA G+
Sbjct: 90  QDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAYQVARGM 148
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 149 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 192

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 34  VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 93
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R             P    LS+   V+ AYQVA G+
Sbjct: 94  QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 152
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 153 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 196

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 84.7 bits (208), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 45  VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 104
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXX--XXXXXPRVRSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R             P    LS+   V+ AYQVA G+
Sbjct: 105 QDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE-EQLSSKDLVSCAYQVARGM 163
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +       HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 66  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++ +     + MA ++A G+ +++ K+ +H+++AARNC+++ D +VKI   G+++D 
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
           Y+ +YY+         RW+   ++ +G    VF T
Sbjct: 181 YETDYYRKGGKGLLPVRWMAPESLKDG----VFTT 211

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 84.3 bits (207), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 82/155 (52%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +       HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 67  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++ +     + MA ++A G+ +++ K+ +H+++AARNC+++ D +VKI   G+++D 
Sbjct: 127 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDI 181
Query: 157 YQKEYYK--------YRWVICSNIAEGRRLNVFKT 183
           Y+ +YY+         RW+   ++ +G    VF T
Sbjct: 182 YETDYYRKGGKGLLPVRWMAPESLKDG----VFTT 212

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 84.3 bits (207), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
           + +  K L  +     L +   E ++  +++H HV+K+ G C    P  L++EY  +G L
Sbjct: 54  TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 79  KQFLLATRXXXXXXXXXXX---------PRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           + FL  +R                    P  R+L+    ++ A+Q++ G++++++ +L+H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
           +D+AARN L++    +KIS  GLS+D Y+++
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEED 204

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 82.8 bits (203), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 19  SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL 78
           + +  K L  +     L +   E ++  +++H HV+K+ G C    P  L++EY  +G L
Sbjct: 54  TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 79  KQFLLATRXXXXXXXXXXX---------PRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           + FL  +R                    P  R+L+    ++ A+Q++ G++++++  L+H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVH 173
Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKE 160
           +D+AARN L++    +KIS  GLS+D Y+++
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSRDVYEED 204

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 45  VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 104
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A               P    LS+   V+ AYQVA G+
Sbjct: 105 QDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE-EQLSSKDLVSCAYQVARGM 163
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 207

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 79/141 (56%), Gaps = 17/141 (12%)
Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQF 81
           KSL    + + +  F RE  L   L+H +V+ +IGI    +G PH +LL Y   GDL QF
Sbjct: 55  KSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH-VLLPYMCHGDLLQF 113
Query: 82  LLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           + + +              R+ +    ++   QVA G+E++++++ +H+D+AARNC++  
Sbjct: 114 IRSPQ--------------RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDE 159
Query: 142 DLSVKISLSGLSKDTYQKEYY 162
             +VK++  GL++D   +EYY
Sbjct: 160 SFTVKVADFGLARDILDREYY 180

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 79.3 bits (194), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 31  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 88
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 89  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 143
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--------KEYYKYRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D  +        K     RW+   ++ +G   
Sbjct: 144 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDG--- 200
Query: 179 NVFKT 183
            VF T
Sbjct: 201 -VFTT 204

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 79.0 bits (193), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           A+G+   +P+    +  K++  +       EF  E  +  + +  HVV+++G+   G P 
Sbjct: 40  AKGVVKDEPETRVAI--KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 97
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            +++E    GDLK +L + R           P     S S+ + MA ++A G+ +++  +
Sbjct: 98  LVIMELMTRGDLKSYLRSLRPEMENNPVLAPP-----SLSKMIQMAGEIADGMAYLNANK 152
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--------KEYYKYRWVICSNIAEGRRL 178
            +H+D+AARNC+++ D +VKI   G+++D  +        K     RW+   ++ +G   
Sbjct: 153 FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDG--- 209
Query: 179 NVFKT 183
            VF T
Sbjct: 210 -VFTT 213

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 45  VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT 104
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX--PRVRSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R             P    LS+   V+ AYQVA G+
Sbjct: 105 QDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPE-EQLSSKDLVSCAYQVARGM 163
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ K+ IH+D+AARN L++ D  +KI+  GL++D +  +  K
Sbjct: 164 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXK 207

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           + T  +  K+L    +     EF+ E  L  +L H +VV ++G+     P  ++  Y   
Sbjct: 54  EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 113
Query: 76  GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
           GDL +FL+                V+S L     V +  Q+A G+E++S   ++HKD+A 
Sbjct: 114 GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 173
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYKY--------RWVICSNIAEGR 176
           RN L+   L+VKIS  GL ++ Y  +YYK         RW+    I  G+
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK 223

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     +E L +   E+++   +  H +++ ++G C 
Sbjct: 52  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 78.6 bits (192), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 80/170 (47%), Gaps = 9/170 (5%)
Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           + T  +  K+L    +     EF+ E  L  +L H +VV ++G+     P  ++  Y   
Sbjct: 37  EQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSH 96
Query: 76  GDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
           GDL +FL+                V+S L     V +  Q+A G+E++S   ++HKD+A 
Sbjct: 97  GDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLAT 156
Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYKY--------RWVICSNIAEGR 176
           RN L+   L+VKIS  GL ++ Y  +YYK         RW+    I  G+
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGK 206

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +       HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 66  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++ +     + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI   G+++D 
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQ--------KEYYKYRWVICSNIAEGRRLNVFKT 183
            +        K     RW+   ++ +G    VF T
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDG----VFTT 211

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +       HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 66  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++ +     + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI   G+++D 
Sbjct: 126 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 180
Query: 157 YQ--------KEYYKYRWVICSNIAEGRRLNVFKT 183
            +        K     RW+   ++ +G    VF T
Sbjct: 181 XETDXXRKGGKGLLPVRWMAPESLKDG----VFTT 211

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 44  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 103
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 104 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 162
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 163 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 41  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 100
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 101 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 159
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 160 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 52  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 86/160 (53%), Gaps = 4/160 (2%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDP 65
           A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C    P
Sbjct: 102 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161
Query: 66  HYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGLEHIS 123
            Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+E+++
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGMEYLA 220
Query: 124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
            ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 221 SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 76.6 bits (187), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 62  PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 120
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 121 TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 166
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+SS+  VK+   GLS+      YYK
Sbjct: 167 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 196

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           EF  E  +       HVV+++G+   G P  +++E    GDLK +L + R          
Sbjct: 63  EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
            P ++ +     + MA ++A G+ +++ K+ +H+D+AARNC+++ D +VKI   G+++D 
Sbjct: 123 PPTLQEM-----IQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDI 177
Query: 157 YQ--------KEYYKYRWVICSNIAEGRRLNVFKT 183
            +        K     RW+   ++ +G    VF T
Sbjct: 178 XETDXXRKGGKGLLPVRWMAPESLKDG----VFTT 208

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 39  PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 97
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 98  TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 143
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+SS+  VK+   GLS+      YYK
Sbjct: 144 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 173

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 34  PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 92
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 93  TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+SS+  VK+   GLS+      YYK
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 168

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 34  PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 92
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 93  TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+SS+  VK+   GLS+      YYK
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 168

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 8   RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
            G  +  P D S L    K+L  V+S+ DE   +F  E  +  K +H ++V+ IG+    
Sbjct: 63  EGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 120
Query: 64  DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
            P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ 
Sbjct: 121 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 172
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
           +   IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 37  PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 95
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 96  TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 141
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+SS+  VK+   GLS+      YYK
Sbjct: 142 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 171

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 52  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACT 111
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 36  PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 94
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 95  TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 140
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+SS+  VK+   GLS+      YYK
Sbjct: 141 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 170

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 76.3 bits (186), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 31  PENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 89
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 90  TLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIA 135
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+SS+  VK+   GLS+      YYK
Sbjct: 136 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 165

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 52  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACT 111
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Query: 8   RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
            G  +  P D S L    K+L  V S+ DE   +F  E  +  KL+H ++V+ IG+    
Sbjct: 63  EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKLNHQNIVRCIGVSLQS 120
Query: 64  DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
            P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ 
Sbjct: 121 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 172
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
           +   IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 9   GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
           G  +  P D S L    K+L  V S+ DE   +F  E  +  KL+H ++V+ IG+     
Sbjct: 50  GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKLNHQNIVRCIGVSLQSL 107
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
           P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ +
Sbjct: 108 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
              IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 160 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 88/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 52  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+AARN L++ +  ++I+  GL++D    +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 82  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 140
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 141 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 186
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
              +VK++  GL++D Y KEYY
Sbjct: 187 EKFTVKVADFGLARDMYDKEYY 208

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC-------RDGDPHYLLL 70
            +V M K+ + +  D  + EF RE     + DH HV K++G+        R   P  ++L
Sbjct: 54  VAVKMLKADIIASSD--IEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIP-MVIL 110
Query: 71  EYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
            +   GDL  FLLA+R               +L     V     +A G+E++S +  IH+
Sbjct: 111 PFMKHGDLHAFLLASRIGENPF---------NLPLQTLVRFMVDIACGMEYLSSRNFIHR 161
Query: 131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           D+AARNC+++ D++V ++  GLS+  Y  +YY+
Sbjct: 162 DLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 81  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 139
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 140 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 185
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
              +VK++  GL++D Y KEYY
Sbjct: 186 EKFTVKVADFGLARDMYDKEYY 207

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 63  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 121
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 122 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
              +VK++  GL++D Y KEYY
Sbjct: 168 EKFTVKVADFGLARDMYDKEYY 189

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 414 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 472
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 473 TLGELRSFLQV--------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 518
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+SS+  VK+   GLS+      YYK
Sbjct: 519 ARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 548

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 55  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 113
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 114 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 159
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
              +VK++  GL++D Y KEYY
Sbjct: 160 EKFTVKVADFGLARDMYDKEYY 181

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 62  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 120
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 121 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
              +VK++  GL++D Y KEYY
Sbjct: 167 EKFTVKVADFGLARDMYDKEYY 188

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 60  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 118
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 119 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 164
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
              +VK++  GL++D Y KEYY
Sbjct: 165 EKFTVKVADFGLARDMYDKEYY 186

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 63  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 121
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 122 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
              +VK++  GL++D Y KEYY
Sbjct: 168 EKFTVKVADFGLARDMYDKEYY 189

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 61  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 119
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 120 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 165
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
              +VK++  GL++D Y KEYY
Sbjct: 166 EKFTVKVADFGLARDMYDKEYY 187

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 17/142 (11%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 58  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 116
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 117 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 162
Query: 141 SDLSVKISLSGLSKDTYQKEYY 162
              +VK++  GL++D Y KEYY
Sbjct: 163 EKFTVKVADFGLARDMYDKEYY 184

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 39  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 98
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 99  QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 157
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+ ARN L++ +  +KI+  GL++D    +YYK
Sbjct: 158 EYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9   GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
           G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+     
Sbjct: 41  GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 98
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
           P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ +
Sbjct: 99  PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 150
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
              IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 151 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 192

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9   GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
           G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+     
Sbjct: 49  GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 106
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
           P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ +
Sbjct: 107 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 158
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
              IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9   GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
           G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+     
Sbjct: 50  GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 107
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
           P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ +
Sbjct: 108 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
              IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 160 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 201

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9   GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
           G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+     
Sbjct: 66  GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 123
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
           P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ +
Sbjct: 124 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 175
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
              IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 176 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 217

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9   GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
           G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+     
Sbjct: 56  GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 113
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
           P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ +
Sbjct: 114 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 165
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
              IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 166 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 207

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9   GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
           G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+     
Sbjct: 76  GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 133
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
           P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ +
Sbjct: 134 PRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 185
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
              IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 186 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 227

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 8   RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
            G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+    
Sbjct: 49  EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 106
Query: 64  DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
            P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ 
Sbjct: 107 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 158
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
           +   IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 159 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYR 201

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 34  PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 92
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 93  TLGELRSFLQV--------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+S+   VK+   GLS+      YYK
Sbjct: 139 ARNVLVSATDCVKLGDFGLSRYMEDSTYYK 168

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 52  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++ Y   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 112 QDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 8   RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
            G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+    
Sbjct: 66  EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 123
Query: 64  DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
            P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ 
Sbjct: 124 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 175
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
           +   IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 176 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 218

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 8   RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
            G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+    
Sbjct: 89  EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 146
Query: 64  DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
            P ++LLE    GDLK FL  TR            +  SL+    + +A  +A G +++ 
Sbjct: 147 LPRFILLELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 198
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
           +   IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 199 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 74.3 bits (181), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 17/162 (10%)
Query: 9   GLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD 64
           G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+     
Sbjct: 49  GQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQSL 106
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
           P ++L+E    GDLK FL  TR            +  SL+    + +A  +A G +++ +
Sbjct: 107 PRFILMELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLEE 158
Query: 125 KRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
              IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 159 NHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 52  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++ Y   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 112 QDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 73.9 bits (180), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 8   RGLKASDPQDTSVLMA--KSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG 63
            G  +  P D S L    K+L  V S+ DE   +F  E  +  K +H ++V+ IG+    
Sbjct: 63  EGQVSGMPNDPSPLQVAVKTLPEVCSEQDEL--DFLMEALIISKFNHQNIVRCIGVSLQS 120
Query: 64  DPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHIS 123
            P ++L+E    GDLK FL  TR            +  SL+    + +A  +A G +++ 
Sbjct: 121 LPRFILMELMAGGDLKSFLRETRPRPS--------QPSSLAMLDLLHVARDIACGCQYLE 172
Query: 124 DKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTYQKEYYK 163
           +   IH+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 173 ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 215

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 73.9 bits (180), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 87/178 (48%), Gaps = 22/178 (12%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD----GDP 65
           LK  D     V +    + +     + EF  E        H +V++++G+C +    G P
Sbjct: 55  LKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP 114
Query: 66  H-YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISD 124
              ++L +  +GDL  +LL +R           P+   L T   +     +ALG+E++S+
Sbjct: 115 KPMVILPFMKYGDLHTYLLYSRLETG-------PKHIPLQT--LLKFMVDIALGMEYLSN 165
Query: 125 KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK--------YRWVICSNIAE 174
           +  +H+D+AARNC++  D++V ++  GLSK  Y  +YY+         +W+   ++A+
Sbjct: 166 RNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD 223

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 16/150 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 414 PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 472
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 473 TLGELRSFLQV--------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 518
Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ARN L+S+   VK+   GLS+      YYK
Sbjct: 519 ARNVLVSATDCVKLGDFGLSRYMEDSTYYK 548

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 72.8 bits (177), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 29  SKDDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
           SKDD    +F  E+++ CKL H  +++ ++G C      YL +EY   G+L  FL  +R 
Sbjct: 55  SKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 112
Query: 88  XXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
                         S LS+ Q +  A  VA G++++S K+ IH+D+AARN L+  +   K
Sbjct: 113 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 172
Query: 147 ISLSGLSK 154
           I+  GLS+
Sbjct: 173 IADFGLSR 180

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 29  SKDDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
           SKDD    +F  E+++ CKL H  +++ ++G C      YL +EY   G+L  FL  +R 
Sbjct: 65  SKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 122
Query: 88  XXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
                         S LS+ Q +  A  VA G++++S K+ IH+D+AARN L+  +   K
Sbjct: 123 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAK 182
Query: 147 ISLSGLSK 154
           I+  GLS+
Sbjct: 183 IADFGLSR 190

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 72.4 bits (176), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 16/141 (11%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E  
Sbjct: 34  PENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELC 92
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DIA
Sbjct: 93  TLGELRSFLQV--------------RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIA 138
Query: 134 ARNCLISSDLSVKISLSGLSK 154
           ARN L+SS+  VK+   GLS+
Sbjct: 139 ARNVLVSSNDCVKLGDFGLSR 159

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 19/145 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D +V M K    S+D     EF +E     KL H  +VK  G+C    P Y++ EY   G
Sbjct: 34  DVAVKMIKEGSMSED-----EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNG 88
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L +                + L  SQ + M Y V  G+  +   + IH+D+AARN
Sbjct: 89  CLLNYLRS--------------HGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARN 134
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
           CL+  DL VK+S  G+++     +Y
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQY 159

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 85/156 (54%), Gaps = 4/156 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 52  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 84/156 (53%), Gaps = 4/156 (2%)
Query: 3   LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR 61
           ++  A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C 
Sbjct: 52  VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111
Query: 62  DGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV--RSLSTSQAVTMAYQVALGL 119
              P Y+++EY   G+L+++L A R            RV    ++    V+  YQ+A G+
Sbjct: 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIN-RVPEEQMTFKDLVSCTYQLARGM 170
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
           E+++ ++ IH+D+AARN L++ +  +KI+  GL++D
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARD 206

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Query: 29  SKDDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
           SKDD    +F  E+++ CKL H  +++ ++G C      YL +EY   G+L  FL  +R 
Sbjct: 62  SKDDH--RDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRV 119
Query: 88  XXXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
                         S LS+ Q +  A  VA G++++S K+ IH+++AARN L+  +   K
Sbjct: 120 LETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAK 179
Query: 147 ISLSGLSK 154
           I+  GLS+
Sbjct: 180 IADFGLSR 187

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 122 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 180
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G++ ++ K+ +H+D+AARNC++ 
Sbjct: 181 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 226
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
              +VK++  GL++D Y KE+
Sbjct: 227 EKFTVKVADFGLARDMYDKEF 247

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 21/156 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 33  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 91
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 92  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 137
Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYK 163
           H+++A RN L+ ++  VKI   GL+K   Q KEYYK
Sbjct: 138 HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 173

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 63  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 121
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G++ ++ K+ +H+D+AARNC++ 
Sbjct: 122 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
              +VK++  GL++D Y KE+
Sbjct: 168 EKFTVKVADFGLARDMYDKEF 188

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 63  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 121
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G++ ++ K+ +H+D+AARNC++ 
Sbjct: 122 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
              +VK++  GL++D Y KE+
Sbjct: 168 EKFTVKVADFGLARDMYDKEF 188

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 61  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 119
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G++ ++ K+ +H+D+AARNC++ 
Sbjct: 120 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 165
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
              +VK++  GL++D Y KE+
Sbjct: 166 EKFTVKVADFGLARDMYDKEF 186

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 68  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 126
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G++ ++ K+ +H+D+AARNC++ 
Sbjct: 127 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 172
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
              +VK++  GL++D Y KE+
Sbjct: 173 EKFTVKVADFGLARDMYDKEF 193

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 64  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 122
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G++ ++ K+ +H+D+AARNC++ 
Sbjct: 123 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
              +VK++  GL++D Y KE+
Sbjct: 169 EKFTVKVADFGLARDMYDKEF 189

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y+++E+  +G+L  +L       
Sbjct: 48  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 105
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 106 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 155 FGLSRLMTGDTY 166

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y+++E+  +G+L  +L       
Sbjct: 48  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 105
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 106 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 155 FGLSRLMTGDTY 166

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 62  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 120
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G+++++ K+ +H+D+AARNC++ 
Sbjct: 121 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 141 SDLSVKISLSGLSKDTYQKE 160
              +VK++  GL++D Y KE
Sbjct: 167 EKFTVKVADFGLARDMYDKE 186

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y+++E+  +G+L  +L       
Sbjct: 53  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 110
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 111 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 160 FGLSRLMTGDTY 171

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 21/158 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 32  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 91  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 136
Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYR 165
           H+D+A RN L+ ++  VKI   GL+K   Q KE++K +
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVK 174

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y+++E+  +G+L  +L       
Sbjct: 46  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 103
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 104 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 150 SGLSK 154
            GLS+
Sbjct: 153 FGLSR 157

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 48  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 105
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 106 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 155 FGLSRLMTGDTY 166

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 48  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 105
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 106 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 155 FGLSRLMTGDTY 166

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 53  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 110
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 111 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 160 FGLSRLMTGDTY 171

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 68.9 bits (167), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ EY  +G+L  +L       
Sbjct: 67  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNR-- 124
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                        ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 125 -----------EEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVAD 173
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 174 FGLSRLMTGDTY 185

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 48  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 105
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 106 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 155 FGLSRLMTGDTY 166

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 53  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 110
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 111 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 160 FGLSRLMTGDTY 171

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y+++E+  +G+L  +L       
Sbjct: 49  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-- 106
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 107 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 155
Query: 150 SGLSK 154
            GLS+
Sbjct: 156 FGLSR 160

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 48  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 105
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 106 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 154
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 155 FGLSRLMTGDTY 166

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 49  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 106
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 107 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 155
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 156 FGLSRLMTGDTY 167

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 52  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 109
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 110 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 158
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 159 FGLSRLMTGDTY 170

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 50  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 107
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 108 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 157 FGLSRLMTGDTY 168

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 46  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 103
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 104 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 150 SGLSK 154
            GLS+
Sbjct: 153 FGLSR 157

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 46  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 103
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 104 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 152
Query: 150 SGLSK 154
            GLS+
Sbjct: 153 FGLSR 157

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 61  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 118
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 119 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 167
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 168 FGLSRLMTGDTY 179

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 53  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 110
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 111 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 160 FGLSRLMTGDTY 171

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 50  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 107
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 108 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 157 FGLSRLMTGDTY 168

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 50  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 107
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 108 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 156
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 157 FGLSRLMTGDTY 168

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            +V M K    S + EAL     E+ +  +L  H ++V ++G C    P YL+ EY  +G
Sbjct: 78  VAVKMLKEKADSSEREALM---SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG 134
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVR--------SLSTSQAVTMAYQVALGLEHISDKRLI 128
           DL  +L + R            + R         L+    +  AYQVA G+E +  K  +
Sbjct: 135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV 194
Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR--------WVICSNIAEG 175
           H+D+AARN L++    VKI   GL++D      Y  R        W+   ++ EG
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG 249

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 68.2 bits (165), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 35  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 93
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L A              R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 94  IMEYLPYGSLRDYLQA-----------HAERIDHIKLLQYTS---QICKGMEYLGTKRYI 139
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTK 165

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 67.8 bits (164), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 255 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 312
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + +S    + MA Q++  +E++  K  IH+++AARNCL+  +  VK++ 
Sbjct: 313 -----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVAD 361
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 362 FGLSRLMTGDTY 373

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 17/141 (12%)
Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQ 80
            KSL    D   + +F  E  +     H +V+ ++GIC   +G P  ++L Y   GDL+ 
Sbjct: 64  VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP-LVVLPYMKHGDLRN 122
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+               P V+ L     +    QVA G++ ++ K+ +H+D+AARNC++ 
Sbjct: 123 FI---------RNETHNPTVKDL-----IGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 141 SDLSVKISLSGLSKDTYQKEY 161
              +VK++  GL++D   KE+
Sbjct: 169 EKFTVKVADFGLARDMLDKEF 189

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 53  EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 110
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++ 
Sbjct: 111 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 159
Query: 150 SGLSK 154
            GLS+
Sbjct: 160 FGLSR 164

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 63  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 121
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 122 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 167
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTK 193

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 50  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 108
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 109 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 154
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTK 180

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 36  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 94
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 95  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 140
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 141 HRDLATRNILVENENRVKIGDFGLTK 166

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 32  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 91  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 136
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTK 162

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 37  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 95
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 96  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 141
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 142 HRDLATRNILVENENRVKIGDFGLTK 167

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 50  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 108
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 109 IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 154
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTK 180

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 38  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 96
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 97  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 142
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 143 HRDLATRNILVENENRVKIGDFGLTK 168

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 35  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 93
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 94  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 139
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTK 165

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 31  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 89
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 90  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 135
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 136 HRDLATRNILVENENRVKIGDFGLTK 161

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 32  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 90
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 91  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 136
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTK 162

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 39  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 97
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 98  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 143
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 144 HRDLATRNILVENENRVKIGDFGLTK 169

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 30  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 88
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY  +G L+ +L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 89  IMEYLPYGSLRDYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 134
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 135 HRDLATRNILVENENRVKIGDFGLTK 160

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 67.0 bits (162), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            +V M KS  H+ + EAL     E+ +   L  H ++V ++G C  G P  ++ EY  +G
Sbjct: 79  VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           DL  FL                   +LST   +  + QVA G+  ++ K  IH+D+AARN
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIAN-STLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 137 CLISSDLSVKISLSGLSKDTYQKEYY 162
            L+++    KI   GL++D      Y
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNY 220

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 20/146 (13%)
Query: 14  DP-QDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL-- 68
           DP QD +  V+  K L HS + E L +F+REI++   L H ++VK  G+C       L  
Sbjct: 35  DPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKL 93
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++E+  +G L+++L   +            R+  +   Q  +   Q+  G+E++  KR I
Sbjct: 94  IMEFLPYGSLREYLQKHKE-----------RIDHIKLLQYTS---QICKGMEYLGTKRYI 139
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+A RN L+ ++  VKI   GL+K
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTK 165

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D +++  KS   +   +   +F +E  +  +  H ++V++IG+C    P Y+++E    G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           D   FL                RV++L     + M    A G+E++  K  IH+D+AARN
Sbjct: 198 DFLTFLRTEGARL---------RVKTL-----LQMVGDAAAGMEYLESKCCIHRDLAARN 243
Query: 137 CLISSDLSVKISLSGLSKD 155
           CL++    +KIS  G+S++
Sbjct: 244 CLVTEKNVLKISDFGMSRE 262

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 67.0 bits (162), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 14/139 (10%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D +++  KS   +   +   +F +E  +  +  H ++V++IG+C    P Y+++E    G
Sbjct: 138 DNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 197
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           D   FL                RV++L     + M    A G+E++  K  IH+D+AARN
Sbjct: 198 DFLTFLRTEGARL---------RVKTL-----LQMVGDAAAGMEYLESKCCIHRDLAARN 243
Query: 137 CLISSDLSVKISLSGLSKD 155
           CL++    +KIS  G+S++
Sbjct: 244 CLVTEKNVLKISDFGMSRE 262

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXX 89
           +D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L       
Sbjct: 294 EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-- 351
Query: 90  XXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                      + ++    + MA Q++  +E++  K  IH+++AARNCL+  +  VK++ 
Sbjct: 352 -----------QEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVAD 400
Query: 150 SGLSK----DTY 157
            GLS+    DTY
Sbjct: 401 FGLSRLMTGDTY 412

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 7/141 (4%)
Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            +V M KS  H+ + EAL     E+ +   L  H ++V ++G C  G P  ++ EY  +G
Sbjct: 79  VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 77  DLKQFLLATRXX--XXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
           DL  FL   R             P    LS+   +  + QVA G+  ++ K  IH+D+AA
Sbjct: 136 DLLNFLRRKRPPGLEYSYNPSHNPE-EQLSSRDLLHFSSQVAQGMAFLASKNCIHRDVAA 194
Query: 135 RNCLISSDLSVKISLSGLSKD 155
           RN L+++    KI   GL++D
Sbjct: 195 RNVLLTNGHVAKIGDFGLARD 215

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 65.9 bits (159), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ + K      D E   E  RE  +  +LD+ ++V++IG+C+  +   L++E    G
Sbjct: 39  DVAIKVLKQGTEKADTE---EMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGG 94
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L +FL+  R                +  S    + +QV++G++++ +K  +H+D+AARN
Sbjct: 95  PLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARN 140
Query: 137 CLISSDLSVKISLSGLSK 154
            L+ +    KIS  GLSK
Sbjct: 141 VLLVNRHYAKISDFGLSK 158

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ M K    S+D     EF  E  +   L H  +V++ G+C    P +++ EY   G
Sbjct: 30  DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 84
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L   R                  T Q + M   V   +E++  K+ +H+D+AARN
Sbjct: 85  CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 130
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
           CL++    VK+S  GLS+     EY
Sbjct: 131 CLVNDQGVVKVSDFGLSRYVLDDEY 155

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ M K    S+D     EF  E  +   L H  +V++ G+C    P +++ EY   G
Sbjct: 35  DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 89
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L   R                  T Q + M   V   +E++  K+ +H+D+AARN
Sbjct: 90  CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
           CL++    VK+S  GLS+     EY
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLDDEY 160

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ M K    S+D     EF  E  +   L H  +V++ G+C    P +++ EY   G
Sbjct: 34  DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 88
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L   R                  T Q + M   V   +E++  K+ +H+D+AARN
Sbjct: 89  CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 134
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
           CL++    VK+S  GLS+     EY
Sbjct: 135 CLVNDQGVVKVSDFGLSRYVLDDEY 159

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ M K    S+D     EF  E  +   L H  +V++ G+C    P +++ EY   G
Sbjct: 35  DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 89
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L   R                  T Q + M   V   +E++  K+ +H+D+AARN
Sbjct: 90  CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 135
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
           CL++    VK+S  GLS+     EY
Sbjct: 136 CLVNDQGVVKVSDFGLSRYVLDDEY 160

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ M K    S+D     EF  E  +   L H  +V++ G+C    P +++ EY   G
Sbjct: 50  DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 104
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L   R                  T Q + M   V   +E++  K+ +H+D+AARN
Sbjct: 105 CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
           CL++    VK+S  GLS+     EY
Sbjct: 151 CLVNDQGVVKVSDFGLSRYVLDDEY 175

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ M K    S+D     EF  E  +   L H  +V++ G+C    P +++ EY   G
Sbjct: 41  DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 95
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L   R                  T Q + M   V   +E++  K+ +H+D+AARN
Sbjct: 96  CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 141
Query: 137 CLISSDLSVKISLSGLSKDTYQKEY 161
           CL++    VK+S  GLS+     EY
Sbjct: 142 CLVNDQGVVKVSDFGLSRYVLDDEY 166

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            +V M KS  H+ + EAL     E+ +   L  H ++V ++G C  G P  ++ EY  +G
Sbjct: 79  VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           DL  FL                   + ST   +  + QVA G+  ++ K  IH+D+AARN
Sbjct: 136 DLLNFLRRKSRVLETDPAFAIAN-STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 194
Query: 137 CLISSDLSVKISLSGLSKDTYQKEYY 162
            L+++    KI   GL++D      Y
Sbjct: 195 VLLTNGHVAKIGDFGLARDIMNDSNY 220

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 14  DPQDTSV---LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYL 68
           DP+  +    +  KSL        + + K+EI++   L H ++VK  GIC +  G+   L
Sbjct: 43  DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 102
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++E+   G LK++L   +                ++  Q +  A Q+  G++++  ++ +
Sbjct: 103 IMEFLPSGSLKEYLPKNK--------------NKINLKQQLKYAVQICKGMDYLGSRQYV 148
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+AARN L+ S+  VKI   GL+K
Sbjct: 149 HRDLAARNVLVESEHQVKIGDFGLTK 174

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 14  DPQDTSV---LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYL 68
           DP+  +    +  KSL        + + K+EI++   L H ++VK  GIC +  G+   L
Sbjct: 31  DPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKL 90
Query: 69  LLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++E+   G LK++L   +                ++  Q +  A Q+  G++++  ++ +
Sbjct: 91  IMEFLPSGSLKEYLPKNK--------------NKINLKQQLKYAVQICKGMDYLGSRQYV 136
Query: 129 HKDIAARNCLISSDLSVKISLSGLSK 154
           H+D+AARN L+ S+  VKI   GL+K
Sbjct: 137 HRDLAARNVLVESEHQVKIGDFGLTK 162

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 18/138 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ + K      D E   E  RE  +  +LD+ ++V++IG+C+  +   L++E    G
Sbjct: 365 DVAIKVLKQGTEKADTE---EMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGG 420
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L +FL+  R                +  S    + +QV++G++++ +K  +H+++AARN
Sbjct: 421 PLHKFLVGKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARN 466
Query: 137 CLISSDLSVKISLSGLSK 154
            L+ +    KIS  GLSK
Sbjct: 467 VLLVNRHYAKISDFGLSK 484

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
           H +VV ++G C + G P  +++E+  +G+L  +L + R              +  L+   
Sbjct: 92  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
            +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 152 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 206

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 63.9 bits (154), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
           H +VV ++G C + G P  +++E+  +G+L  +L + R              +  L+   
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
            +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 204

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
           H +VV ++G C + G P  +++E+  +G+L  +L + R              +  L+   
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
            +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 187 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 241

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 7   ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
           A GL  SD   T +V M K   H  + EAL     E+ +   L +H ++V ++G C  G 
Sbjct: 62  AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 118
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
           P  ++ EY  +GDL  FL   R           P +      +L     ++ +YQVA G+
Sbjct: 119 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 176
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
             ++ K  IH+D+AARN L++     KI   GL++D
Sbjct: 177 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 212

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 7   ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
           A GL  SD   T +V M K   H  + EAL     E+ +   L +H ++V ++G C  G 
Sbjct: 44  AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 100
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
           P  ++ EY  +GDL  FL   R           P +      +L     ++ +YQVA G+
Sbjct: 101 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 158
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
             ++ K  IH+D+AARN L++     KI   GL++D
Sbjct: 159 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 194

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 7   ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
           A GL  SD   T +V M K   H  + EAL     E+ +   L +H ++V ++G C  G 
Sbjct: 67  AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 123
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
           P  ++ EY  +GDL  FL   R           P +      +L     ++ +YQVA G+
Sbjct: 124 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 181
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
             ++ K  IH+D+AARN L++     KI   GL++D
Sbjct: 182 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 217

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 76/156 (48%), Gaps = 12/156 (7%)
Query: 7   ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
           A GL  SD   T +V M K   H  + EAL     E+ +   L +H ++V ++G C  G 
Sbjct: 60  AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 116
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
           P  ++ EY  +GDL  FL   R           P +      +L     ++ +YQVA G+
Sbjct: 117 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 174
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
             ++ K  IH+D+AARN L++     KI   GL++D
Sbjct: 175 AFLASKNCIHRDLAARNILLTHGRITKICDFGLARD 210

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            +V M KS  H+ + EAL     E+ +   L  H ++V ++G C  G P  ++ EY  +G
Sbjct: 79  VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 135
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           DL  FL                  R L     +  + QVA G+  ++ K  IH+D+AARN
Sbjct: 136 DLLNFL-----RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 190
Query: 137 CLISSDLSVKISLSGLSKDTYQKEYY 162
            L+++    KI   GL++D      Y
Sbjct: 191 VLLTNGHVAKIGDFGLARDIMNDSNY 216

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            +V M KS  H+ + EAL     E+ +   L  H ++V ++G C  G P  ++ EY  +G
Sbjct: 71  VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 127
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           DL  FL                  R L     +  + QVA G+  ++ K  IH+D+AARN
Sbjct: 128 DLLNFL-----RRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARN 182
Query: 137 CLISSDLSVKISLSGLSKDTYQKEYY 162
            L+++    KI   GL++D      Y
Sbjct: 183 VLLTNGHVAKIGDFGLARDIMNDSNY 208

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           D ++ M K    S+D     EF  E  +   L H  +V++ G+C    P +++ EY   G
Sbjct: 50  DVAIKMIKEGSMSED-----EFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANG 104
Query: 77  DLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L  +L   R                  T Q + M   V   +E++  K+ +H+D+AARN
Sbjct: 105 CLLNYLREMR--------------HRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN 150
Query: 137 CLISSDLSVKISLSGLSK 154
           CL++    VK+S  GLS+
Sbjct: 151 CLVNDQGVVKVSDFGLSR 168

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 18  TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            +V M KS  H+ + EAL     E+ +   L  H ++V ++G C  G P  ++ EY  +G
Sbjct: 64  VAVKMLKSTAHADEKEALMS---ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYG 120
Query: 77  DLKQFLLATRXXXXXXXXXXXPRV----------RSLSTSQAVTMAYQVALGLEHISDKR 126
           DL  FL   R           P            R L     +  + QVA G+  ++ K 
Sbjct: 121 DLLNFL--RRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN 178
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
            IH+D+AARN L+++    KI   GL++D      Y
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
           H +VV ++G C + G P  +++E+  +G+L  +L + R              +  L+   
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
            +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 15/123 (12%)
Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
           +E L  F+RE+    +L H ++V MI +  + D +YL++EY +   L +++ +       
Sbjct: 52  EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG----- 106
Query: 92  XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
                      LS   A+    Q+  G++H  D R++H+DI  +N LI S+ ++KI   G
Sbjct: 107 ----------PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFG 156
Query: 152 LSK 154
           ++K
Sbjct: 157 IAK 159

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
           H +VV ++G C + G P  +++E+  +G+L  +L + R                L+    
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK---DFLTLEHL 146
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDY 200

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 62  LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 121 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 165
Query: 145 VKISLSGLSKDTYQKE-YYK 163
            KIS  GLSK     E YYK
Sbjct: 166 AKISDFGLSKALRADENYYK 185

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 62  LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 120
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 121 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 165
Query: 145 VKISLSGLSKDTYQKE-YYK 163
            KIS  GLSK     E YYK
Sbjct: 166 AKISDFGLSKALRADENYYK 185

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 52  LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 110
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 111 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 155
Query: 145 VKISLSGLSKDTYQKE-YYK 163
            KIS  GLSK     E YYK
Sbjct: 156 AKISDFGLSKALRADENYYK 175

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 63.2 bits (152), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
           H +VV ++G C + G P  ++ E+  +G+L  +L + R              +  L+   
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
            +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 404 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 462
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 463 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 507
Query: 145 VKISLSGLSKDTYQKE-YYK 163
            KIS  GLSK     E YYK
Sbjct: 508 AKISDFGLSKALRADENYYK 527

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
           +K+EID+   L H H++K  G C D       L++EY   G L+ +L             
Sbjct: 63  WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL------------- 109
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
             PR  S+  +Q +  A Q+  G+ ++  +  IH+++AARN L+ +D  VKI   GL+K 
Sbjct: 110 --PR-HSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA 166
Query: 156 TYQK-EYYKYR 165
             +  EYY+ R
Sbjct: 167 VPEGHEYYRVR 177

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 405 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 463
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 464 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 508
Query: 145 VKISLSGLSKDTYQKE-YYK 163
            KIS  GLSK     E YYK
Sbjct: 509 AKISDFGLSKALRADENYYK 528

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 46  LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 105 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 149
Query: 145 VKISLSGLSKDTYQKE-YYK 163
            KIS  GLSK     E YYK
Sbjct: 150 AKISDFGLSKALRADENYYK 169

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
           H +VV ++G C + G P  ++ E+  +G+L  +L + R              +  L+   
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
            +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 195

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 60  LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 118
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 119 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 163
Query: 145 VKISLSGLSKDTYQKE-YYK 163
            KIS  GLSK     E YYK
Sbjct: 164 AKISDFGLSKALRADENYYK 183

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 62/114 (54%), Gaps = 4/114 (3%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
           H +VV ++G C + G P  +++E+  +G+L  +L + R                L+    
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYK---DFLTLEHL 146
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 147 ICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 200

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 62.8 bits (151), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 40  LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 98
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 99  NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 143
Query: 145 VKISLSGLSKDTYQKE-YYK 163
            KIS  GLSK     E YYK
Sbjct: 144 AKISDFGLSKALRADENYYK 163

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 18/140 (12%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 42  LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 100
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 101 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 145
Query: 145 VKISLSGLSKDTYQKE-YYK 163
            KIS  GLSK     E YYK
Sbjct: 146 AKISDFGLSKALRADENYYK 165

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
           +K+EID+   L H H++K  G C D       L++EY   G L+ +L             
Sbjct: 63  WKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL------------- 109
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
             PR  S+  +Q +  A Q+  G+ ++  +  IH+++AARN L+ +D  VKI   GL+K 
Sbjct: 110 --PR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA 166
Query: 156 TYQK-EYYKYR 165
             +  EYY+ R
Sbjct: 167 VPEGHEYYRVR 177

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 17/130 (13%)
Query: 26  LVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           L +  +D AL  E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L  
Sbjct: 46  LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ 104
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            R                +     + + +QV++G++++ +   +H+D+AARN L+ +   
Sbjct: 105 NR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY 149
Query: 145 VKISLSGLSK 154
            KIS  GLSK
Sbjct: 150 AKISDFGLSK 159

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
           +K+EID+   L H H++K  G C D       L++EY   G L+ +L             
Sbjct: 80  WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL------------- 126
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
             PR  S+  +Q +  A Q+  G+ ++  +  IH+D+AARN L+ +D  VKI   GL+K 
Sbjct: 127 --PR-HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 183
Query: 156 TYQK-EYYKYR 165
             +  E Y+ R
Sbjct: 184 VPEGHEXYRVR 194

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 1/107 (0%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
           H +VV ++G C + G P  +++E+  +G+L  +L + R                L+    
Sbjct: 91  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
           +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D
Sbjct: 151 ICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 7   ARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD 64
           A GL  SD   T +V M K   H  + EAL     E+ +   L +H ++V ++G C  G 
Sbjct: 67  AYGLIKSDAAMTVAVKMLKPSAHLTEREALMS---ELKVLSYLGNHMNIVNLLGACTIGG 123
Query: 65  PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV-----RSLSTSQAVTMAYQVALGL 119
           P  ++ EY  +GDL  FL   R           P +      +L     ++ +YQVA G+
Sbjct: 124 PTLVITEYCCYGDLLNFL--RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGM 181
Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
             ++ K  IH+D+AARN L++     KI   GL++
Sbjct: 182 AFLASKNCIHRDLAARNILLTHGRITKICDFGLAR 216

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 18/141 (12%)
Query: 17  DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC-RDGDPHY-LLLEYT 73
           +T  L+A K L HS  D+   +F+REI +   L    +VK  G+    G P   L++EY 
Sbjct: 34  NTGALVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYL 92
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G L+ FL   R                L  S+ +  + Q+  G+E++  +R +H+D+A
Sbjct: 93  PSGCLRDFLQRHRAR--------------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 138
Query: 134 ARNCLISSDLSVKISLSGLSK 154
           ARN L+ S+  VKI+  GL+K
Sbjct: 139 ARNILVESEAHVKIADFGLAK 159

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 66  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGFVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
            +F  E  +   LDH H+VK+IGI  + +P ++++E   +G+L  +L   +         
Sbjct: 70  EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNK--------- 119
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                 SL     V  + Q+   + ++     +H+DIA RN L++S   VK+   GLS+ 
Sbjct: 120 -----NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 174
Query: 156 TYQKEYYK 163
              ++YYK
Sbjct: 175 IEDEDYYK 182

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 54  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 112
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 113 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 158
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 159 RDLAARNILINSNLVCKVSDFGLSR 183

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
            +F  E  +   LDH H+VK+IGI  + +P ++++E   +G+L  +L   +         
Sbjct: 58  EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNK--------- 107
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                 SL     V  + Q+   + ++     +H+DIA RN L++S   VK+   GLS+ 
Sbjct: 108 -----NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 162
Query: 156 TYQKEYYK 163
              ++YYK
Sbjct: 163 IEDEDYYK 170

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    +D +V + K+L     ++   +F  E  +  + DH +VV + G+   G P  ++
Sbjct: 64  LKLPGKRDVAVAI-KTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIV 122
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           +E+ + G L  FL                     +  Q V M   +A G+ +++D   +H
Sbjct: 123 IEFMENGALDAFLRKHDG--------------QFTVIQLVGMLRGIAAGMRYLADMGYVH 168
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN L++S+L  K+S  GLS+
Sbjct: 169 RDLAARNILVNSNLVCKVSDFGLSR 193

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 37  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 95
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 96  TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 141
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSR 166

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 66  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 64  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 122
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 123 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 168
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 169 RDLAARNILINSNLVCKVSDFGLSR 193

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
            +F  E  +   LDH H+VK+IGI  + +P ++++E   +G+L  +L   +         
Sbjct: 54  EKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNK--------- 103
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                 SL     V  + Q+   + ++     +H+DIA RN L++S   VK+   GLS+ 
Sbjct: 104 -----NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY 158
Query: 156 TYQKEYYK 163
              ++YYK
Sbjct: 159 IEDEDYYK 166

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 66  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 66  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
           H +VV ++G C + G P  +++E+  +G+L  +L + R              +  L+   
Sbjct: 90  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
            +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D
Sbjct: 150 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 66  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 60.5 bits (145), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
           H +VV ++G C + G P  +++E+  +G+L  +L + R              +  L+   
Sbjct: 81  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
            +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 60.1 bits (144), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LKA   +++ V + K+L     +    EF  E  +  + +H +++++ G+  +  P  +L
Sbjct: 35  LKAPGKKESCVAI-KTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMIL 93
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            E+ + G L  FL                     +  Q V M   +A G+ ++++   +H
Sbjct: 94  TEFMENGALDSFLRLNDG--------------QFTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN L++S+L  K+S  GLS+
Sbjct: 140 RDLAARNILVNSNLVCKVSDFGLSR 164

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P    + +A K+L     ++   +F  E  +  + DH +V+ + G+     P  ++ E+ 
Sbjct: 57  PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFM 116
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
           + G L  FL                     +  Q V M   +A G+++++D   +H+D+A
Sbjct: 117 ENGSLDSFLRQNDG--------------QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLA 162
Query: 134 ARNCLISSDLSVKISLSGLSK 154
           ARN L++S+L  K+S  GLS+
Sbjct: 163 ARNILVNSNLVCKVSDFGLSR 183

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LKA   +++ V + K+L     +    EF  E  +  + +H +++++ G+  +  P  +L
Sbjct: 37  LKAPGKKESCVAI-KTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMIL 95
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            E+ + G L  FL                     +  Q V M   +A G+ ++++   +H
Sbjct: 96  TEFMENGALDSFLRLNDG--------------QFTVIQLVGMLRGIASGMRYLAEMSYVH 141
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN L++S+L  K+S  GLS+
Sbjct: 142 RDLAARNILVNSNLVCKVSDFGLSR 166

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
            +F  E ++  KL H  +V++ G+C +  P  L+ E+ + G L  +L   R         
Sbjct: 47  EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------- 99
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                   +    + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++ 
Sbjct: 100 -------FAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 156 TYQKEY 161
               +Y
Sbjct: 153 VLDDQY 158

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 59.7 bits (143), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 2/108 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRS-LSTSQ 107
           H +VV ++G C + G P  ++ E+  +G+L  +L + R              +  L+   
Sbjct: 81  HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
            +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D
Sbjct: 141 LICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           ++TSVL A  ++ +K +E L ++  EID+    DH ++VK++      +  ++L+E+   
Sbjct: 59  KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 76  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G +   +L                 R L+ SQ   +  Q    L ++ D ++IH+D+ A 
Sbjct: 119 GAVDAVMLELE--------------RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 136 NCLISSDLSVKISLSGLS 153
           N L + D  +K++  G+S
Sbjct: 165 NILFTLDGDIKLADFGVS 182

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           ++TSVL A  ++ +K +E L ++  EID+    DH ++VK++      +  ++L+E+   
Sbjct: 59  KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 76  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G +   +L                 R L+ SQ   +  Q    L ++ D ++IH+D+ A 
Sbjct: 119 GAVDAVMLELE--------------RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 136 NCLISSDLSVKISLSGLS 153
           N L + D  +K++  G+S
Sbjct: 165 NILFTLDGDIKLADFGVS 182

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           ++TSVL A  ++ +K +E L ++  EID+    DH ++VK++      +  ++L+E+   
Sbjct: 59  KETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 118
Query: 76  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G +   +L                 R L+ SQ   +  Q    L ++ D ++IH+D+ A 
Sbjct: 119 GAVDAVMLELE--------------RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 136 NCLISSDLSVKISLSGLS 153
           N L + D  +K++  G+S
Sbjct: 165 NILFTLDGDIKLADFGVS 182

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQA 108
           H +VV ++G C + G P  +++E+  +G+L  +L + R            +   L+    
Sbjct: 92  HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYK-DFLTLEHL 150
Query: 109 VTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
           +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D
Sbjct: 151 IXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARD 197

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 17  DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL--LLEYT 73
           +T  L+A K L HS  D+   +F+REI +   L    +VK  G+        L  ++EY 
Sbjct: 38  NTGALVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 96
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G L+ FL   R                L  S+ +  + Q+  G+E++  +R +H+D+A
Sbjct: 97  PSGCLRDFLQRHRAR--------------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 142
Query: 134 ARNCLISSDLSVKISLSGLSK-DTYQKEYYKYR 165
           ARN L+ S+  VKI+  GL+K     K+YY  R
Sbjct: 143 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 175

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 66  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GL++
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLAR 195

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 17  DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL--LLEYT 73
           +T  L+A K L HS  D+   +F+REI +   L    +VK  G+        L  ++EY 
Sbjct: 50  NTGALVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 108
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G L+ FL   R                L  S+ +  + Q+  G+E++  +R +H+D+A
Sbjct: 109 PSGCLRDFLQRHRAR--------------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 154
Query: 134 ARNCLISSDLSVKISLSGLSK-DTYQKEYYKYR 165
           ARN L+ S+  VKI+  GL+K     K+YY  R
Sbjct: 155 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 19/153 (12%)
Query: 17  DTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL--LLEYT 73
           +T  L+A K L HS  D+   +F+REI +   L    +VK  G+        L  ++EY 
Sbjct: 37  NTGALVAVKQLQHSGPDQQ-RDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYL 95
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G L+ FL   R                L  S+ +  + Q+  G+E++  +R +H+D+A
Sbjct: 96  PSGCLRDFLQRHRAR--------------LDASRLLLYSSQICKGMEYLGSRRCVHRDLA 141
Query: 134 ARNCLISSDLSVKISLSGLSK-DTYQKEYYKYR 165
           ARN L+ S+  VKI+  GL+K     K+YY  R
Sbjct: 142 ARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 174

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 66  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 125 TEYMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GL +
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLGR 195

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
           ++REI++   L H H+VK  G C D       L++EY   G L+ +L             
Sbjct: 58  WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------------- 104
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
             PR   +  +Q +  A Q+  G+ ++  +  IH+ +AARN L+ +D  VKI   GL+K 
Sbjct: 105 --PR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA 161
Query: 156 TYQK-EYYKYR 165
             +  EYY+ R
Sbjct: 162 VPEGHEYYRVR 172

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
           ++REI++   L H H+VK  G C D       L++EY   G L+ +L             
Sbjct: 57  WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------------- 103
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
             PR   +  +Q +  A Q+  G+ ++  +  IH+ +AARN L+ +D  VKI   GL+K 
Sbjct: 104 --PR-HCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA 160
Query: 156 TYQK-EYYKYR 165
             +  EYY+ R
Sbjct: 161 VPEGHEYYRVR 171

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L     D+   +F  E  +  + DH +++ + G+     P  ++ EY + G L  FL 
Sbjct: 48  KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 107
Query: 84  ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                               +  Q V M   +  G++++SD   +H+D+AARN L++S+L
Sbjct: 108 KNDG--------------RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNL 153
Query: 144 SVKISLSGLSK 154
             K+S  G+S+
Sbjct: 154 VCKVSDFGMSR 164

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
            +F  E ++  KL H  +V++ G+C +  P  L+ E+ + G L  +L   R         
Sbjct: 45  EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------- 97
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                   +    + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++ 
Sbjct: 98  -------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 150
Query: 156 TYQKEY 161
               +Y
Sbjct: 151 VLDDQY 156

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
            +F  E ++  KL H  +V++ G+C +  P  L+ E+ + G L  +L   R         
Sbjct: 47  EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------- 99
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                   +    + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++ 
Sbjct: 100 -------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 152
Query: 156 TYQKEY 161
               +Y
Sbjct: 153 VLDDQY 158

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 14/131 (10%)
Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L     ++   +F  E  +  + DH +++ + G+     P  ++ EY + G L  FL 
Sbjct: 56  KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLK 115
Query: 84  ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                               +  Q V M   ++ G++++SD   +H+D+AARN LI+S+L
Sbjct: 116 KNDG--------------QFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNL 161
Query: 144 SVKISLSGLSK 154
             K+S  GLS+
Sbjct: 162 VCKVSDFGLSR 172

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L     D+   +F  E  +  + DH +++ + G+     P  ++ EY + G L  FL 
Sbjct: 63  KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 122
Query: 84  ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                               +  Q V M   +  G++++SD   +H+D+AARN L++S+L
Sbjct: 123 KNDG--------------RFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNL 168
Query: 144 SVKISLSGLSK 154
             K+S  G+S+
Sbjct: 169 VCKVSDFGMSR 179

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
            +F  E ++  KL H  +V++ G+C +  P  L+ E+ + G L  +L   R         
Sbjct: 50  EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL------- 102
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                   +    + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++ 
Sbjct: 103 -------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 155
Query: 156 TYQKEY 161
               +Y
Sbjct: 156 VLDDQY 161

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 14/131 (10%)
Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L     D+   +F  E  +  + DH +++ + G+     P  ++ EY + G L  FL 
Sbjct: 42  KTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLR 101
Query: 84  ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                               +  Q V M   +  G++++SD   +H+D+AARN L++S+L
Sbjct: 102 KNDG--------------RFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNL 147
Query: 144 SVKISLSGLSK 154
             K+S  G+S+
Sbjct: 148 VCKVSDFGMSR 158

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
           S+DD     F  E ++  KL H  +V++ G+C +  P  L+ E+ + G L  +L   R  
Sbjct: 65  SEDD-----FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL 119
Query: 89  XXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                          +    + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S
Sbjct: 120 --------------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS 165
Query: 149 LSGLSKDTYQKEY 161
             G+++     +Y
Sbjct: 166 DFGMTRFVLDDQY 178

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 50  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 95
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 96  PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 155
Query: 158 QKEY 161
             EY
Sbjct: 156 DNEY 159

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
            +F  E ++  KL H  +V++ G+C +  P  L+ E+ + G L  +L   R         
Sbjct: 48  EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGL------- 100
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                   +    + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++ 
Sbjct: 101 -------FAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRF 153
Query: 156 TYQKEY 161
               +Y
Sbjct: 154 VLDDQY 159

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           L+    +D  V + K+L     +    +F  E  +  + DH +++++ G+   G    ++
Sbjct: 70  LRVPGQRDVPVAI-KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   V  G+ ++SD   +H
Sbjct: 129 TEYMENGSLDTFLRTHDG--------------QFTIMQLVGMLRGVGAGMRYLSDLGYVH 174
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN L+ S+L  K+S  GLS+
Sbjct: 175 RDLAARNVLVDSNLVCKVSDFGLSR 199

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 61  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 106
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 166
Query: 158 QKEY 161
             EY
Sbjct: 167 DNEY 170

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 100
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 160
Query: 158 QKEY 161
             EY
Sbjct: 161 DNEY 164

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 60  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 105
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 106 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 165
Query: 158 QKEY 161
             EY
Sbjct: 166 DNEY 169

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           L+    +D  V + K+L     +    +F  E  +  + DH +++++ G+   G    ++
Sbjct: 70  LRVPGQRDVPVAI-KALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L  FL                     +  Q V M   V  G+ ++SD   +H
Sbjct: 129 TEYMENGSLDTFLRTHDG--------------QFTIMQLVGMLRGVGAGMRYLSDLGYVH 174
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN L+ S+L  K+S  GLS+
Sbjct: 175 RDLAARNVLVDSNLVCKVSDFGLSR 199

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 65  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 110
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++   
Sbjct: 111 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIE 170
Query: 158 QKEY 161
             EY
Sbjct: 171 DNEY 174

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK S  +    +  K+L     ++   +F  E  +  +  H +++++ G+     P  ++
Sbjct: 65  LKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L +FL                +    S  Q V M   +A G++++++   +H
Sbjct: 125 TEYMENGALDKFL--------------REKDGEFSVLQLVGMLRGIAAGMKYLANMNYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN L++S+L  K+S  GLS+
Sbjct: 171 RDLAARNILVNSNLVCKVSDFGLSR 195

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 66  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            E  + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 125 TEXMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 72/166 (43%), Gaps = 53/166 (31%)
Query: 50  HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATR------------------XXXX 90
           H +VV ++G C + G P  +++EY  +G+L  +L + R                      
Sbjct: 90  HLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAALHMEPKKEKMEP 149
Query: 91  XXXXXXXPRVRSLSTSQA----------------------------------VTMAYQVA 116
                  PR+ S+++S++                                  ++ ++QVA
Sbjct: 150 GLEQGKKPRLDSVTSSESFASSGFQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVA 209
Query: 117 LGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
            G+E +S ++ IH+D+AARN L+S +  VKI   GL++D Y+   Y
Sbjct: 210 RGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 37  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 95
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            E  + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 96  TEXMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVH 141
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 142 RDLAARNILINSNLVCKVSDFGLSR 166

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK    ++ SV + K+L     ++   +F  E  +  + DH +++++ G+     P  ++
Sbjct: 66  LKLPSKKEISVAI-KTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            E  + G L  FL                     +  Q V M   +A G++++SD   +H
Sbjct: 125 TEXMENGSLDSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGAVH 170
Query: 130 KDIAARNCLISSDLSVKISLSGLSK 154
           +D+AARN LI+S+L  K+S  GLS+
Sbjct: 171 RDLAARNILINSNLVCKVSDFGLSR 195

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 57.0 bits (136), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 15  PQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           P    + +A K+L     ++   +F  E  +  + DH +V+ + G+     P  ++ E+ 
Sbjct: 31  PGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFM 90
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
           + G L  FL                     +  Q V M   +A G+++++D   +H+ +A
Sbjct: 91  ENGSLDSFLRQNDG--------------QFTVIQLVGMLRGIAAGMKYLADMNYVHRALA 136
Query: 134 ARNCLISSDLSVKISLSGLSK 154
           ARN L++S+L  K+S  GLS+
Sbjct: 137 ARNILVNSNLVCKVSDFGLSR 157

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 51  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
           P    L+ ++ + MA Q+A G+  I ++  IH+++ A N L+S  LS KI+  GL++   
Sbjct: 97  PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIE 156
Query: 158 QKEY 161
             EY
Sbjct: 157 DNEY 160

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 100
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 56  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 101
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++
Sbjct: 102 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 158

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 100
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 57  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 102
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++
Sbjct: 103 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 159

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 64  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 109
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++
Sbjct: 110 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 166

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 63  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 108
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++
Sbjct: 109 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 165

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 55  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 100
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++
Sbjct: 101 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 157

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL               
Sbjct: 61  FLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFL-------------KT 106
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  GL++
Sbjct: 107 PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLAR 163

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 34  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 93
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 94  -LIMQLMPFGXLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 34/165 (20%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-- 64
           +G+   + +   + +A K L  +   +A  EF  E  +   +DH H+V+++G+C      
Sbjct: 56  KGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ 115
Query: 65  ------PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALG 118
                 PH  LLEY                             ++ +   +    Q+A G
Sbjct: 116 LVTQLMPHGCLLEYVH-----------------------EHKDNIGSQLLLNWCVQIAKG 152
Query: 119 LEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEY 161
           + ++ ++RL+H+D+AARN L+ S   VKI+  GL++  +  +KEY
Sbjct: 153 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 197

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 33  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 93  -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 35  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 95  -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 34  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 93
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 94  -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 138
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 176

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 36  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 95
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 96  -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 37  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 96
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 97  -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 179

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 40  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 99
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 100 -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 34/165 (20%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-- 64
           +G+   + +   + +A K L  +   +A  EF  E  +   +DH H+V+++G+C      
Sbjct: 33  KGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ 92
Query: 65  ------PHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALG 118
                 PH  LLEY                             ++ +   +    Q+A G
Sbjct: 93  LVTQLMPHGCLLEYV-----------------------HEHKDNIGSQLLLNWCVQIAKG 129
Query: 119 LEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEY 161
           + ++ ++RL+H+D+AARN L+ S   VKI+  GL++  +  +KEY
Sbjct: 130 MMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEY 174

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 33  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 93  -LITQLMPFGXLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           ++T  L A  ++ +K +E L ++  EI++    DH ++VK++G        ++++E+   
Sbjct: 41  KETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 100
Query: 76  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G +   +L                 R L+  Q   +  Q+   L  +  KR+IH+D+ A 
Sbjct: 101 GAVDAIMLELD--------------RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 146
Query: 136 NCLISSDLSVKISLSGLS 153
           N L++ +  ++++  G+S
Sbjct: 147 NVLMTLEGDIRLADFGVS 164

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           ++T  L A  ++ +K +E L ++  EI++    DH ++VK++G        ++++E+   
Sbjct: 33  KETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPG 92
Query: 76  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G +   +L                 R L+  Q   +  Q+   L  +  KR+IH+D+ A 
Sbjct: 93  GAVDAIMLELD--------------RGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 138
Query: 136 NCLISSDLSVKISLSGLS 153
           N L++ +  ++++  G+S
Sbjct: 139 NVLMTLEGDIRLADFGVS 156

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 33  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 93  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 43  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 102
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 103 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 147
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 185

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 33  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 93  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 36  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 95
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 96  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 35  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 95  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 177

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 33  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 93  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 175

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 40  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 99
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 100 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 58  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 117
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 118 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 162
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 200

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 40  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 99
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 100 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 182

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 36  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 95
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 96  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 36  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 95
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 96  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 140
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 178

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 39  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 98
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 99  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 143
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 181

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 27  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 86
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 87  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 131
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 169

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 30  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 89
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 90  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAEGMNYLEDRR 134
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 172

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 60  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 108
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+AA N L+  +L  K++  GL++   
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
             EY
Sbjct: 166 DNEY 169

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
           +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A         
Sbjct: 57  SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG------- 109
Query: 94  XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
                    +   +A +   Q+   +++   KR++H+D+ A N L+ +D+++KI+  G S
Sbjct: 110 --------RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
Query: 154 KD 155
            +
Sbjct: 162 NE 163

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/122 (22%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
           +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A         
Sbjct: 54  SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHG------- 106
Query: 94  XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
                    +   +A +   Q+   +++   KR++H+D+ A N L+ +D+++KI+  G S
Sbjct: 107 --------RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
Query: 154 KD 155
            +
Sbjct: 159 NE 160

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 37  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 96
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 97  -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 141
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  G +K     +KEY+
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 179

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 35  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 95  -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  G +K     +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 35  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+++   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 95  -LIMQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  G +K     +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y+++EY   G L  FL               
Sbjct: 60  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMG---------- 108
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
             EY
Sbjct: 166 DNEY 169

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A   L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 67  KGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 126
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 127 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 171
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K     +KEY+
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYH 209

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
            + +K +  +   V++ K L+   D+E    F +E+ +   L+H +V+K IG+       
Sbjct: 24  GQAIKVTHRETGEVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRL 82
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
             + EY   G L+  + +                     SQ V+ A  +A G+ ++    
Sbjct: 83  NFITEYIKGGTLRGIIKSMDS--------------QYPWSQRVSFAKDIASGMAYLHSMN 128
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK 154
           +IH+D+ + NCL+  + +V ++  GL++
Sbjct: 129 IIHRDLNSHNCLVRENKNVVVADFGLAR 156

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 32  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G++ + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 92  LEYAPRGEVYKELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 32  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G++ + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 92  LEYAPRGEVYKELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 31  ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 90
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 91  LEYAPLGTVYREL---------------QKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S+  +KI+  G S
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS 159

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 35  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 94
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 95  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  G +K     +KEY+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 177

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 31  ARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 90
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 91  LEYAPLGTVYREL---------------QKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S+  +KI+  G S
Sbjct: 136 RDIKPENLLLGSNGELKIADFGWS 159

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 33  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 92
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 93  -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 137
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  G +K     +KEY+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 175

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 40  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQ 99
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   +               ++ +   +    Q+A G+ ++ D+R
Sbjct: 100 -LITQLMPFGCLLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRR 144
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  G +K     +KEY+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYH 182

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 29  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 88
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 89  LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 134 RDIKPENLLLGSAGELKIANFGWS 157

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 30  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 90  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 135 RDIKPENLLLGSAGELKIANFGWS 158

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 53  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---------- 101
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 102 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 158
Query: 158 QKEY 161
             EY
Sbjct: 159 DNEY 162

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 60  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 108
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
             EY
Sbjct: 166 DNEY 169

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y+++EY   G L  FL               
Sbjct: 60  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMG---------- 108
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
             EY
Sbjct: 166 DNEY 169

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 16  QDTSVLMAKSLVHSKDD------EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           +D SV+  KSL+    +      E   EF+RE+ +   L+H ++VK+ G+    +P  ++
Sbjct: 42  KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMV 99
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--L 127
           +E+   GDL   LL               +   +  S  + +   +ALG+E++ ++   +
Sbjct: 100 MEFVPCGDLYHRLLD--------------KAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 128 IHKDIAARNCLISS-----DLSVKISLSGLSKDT 156
           +H+D+ + N  + S      +  K++  GLS+ +
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQS 179

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 49  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 97
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 98  ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 154
Query: 158 QKEY 161
             EY
Sbjct: 155 DNEY 158

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 51  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 99
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 100 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 156
Query: 158 QKEY 161
             EY
Sbjct: 157 DNEY 160

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F  E  +  KL H  +V++  +  + +P Y++ EY + G L  FL               
Sbjct: 51  FLEEAQIMKKLKHDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEG---------- 99
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              R+L     V MA QVA G+ +I     IH+D+ + N L+ + L  KI+  GL++
Sbjct: 100 ---RALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLAR 153

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
           ++  F  E +L   L H  +V++  +    +P Y++ EY   G L  FL +         
Sbjct: 51  SVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL- 109
Query: 94  XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
               P++   S         Q+A G+ +I  K  IH+D+ A N L+S  L  KI+  GL+
Sbjct: 110 ----PKLIDFSA--------QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 157
Query: 154 KDTYQKEY 161
           +     EY
Sbjct: 158 RVIEDNEY 165

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---------- 274
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 275 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 158 QKEY 161
             EY
Sbjct: 332 DNEY 335

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y+++EY   G L  FL               
Sbjct: 60  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMG---------- 108
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 162

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---------- 274
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 275 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 158 QKEY 161
             EY
Sbjct: 332 DNEY 335

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 30  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 90  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 26  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 85
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 86  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 130
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 131 RDIKPENLLLGSAGELKIADFGWS 154

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 27  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 87  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 60  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMG---------- 108
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
             EY
Sbjct: 166 DNEY 169

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/132 (21%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
           + E+ + C+L H  ++++     D +  YL+LE    G++ ++L                
Sbjct: 59  QNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL--------------KN 104
Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
           RV+  S ++A    +Q+  G+ ++    ++H+D+   N L++ ++++KI+  GL+  T  
Sbjct: 105 RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA--TQL 162
Query: 159 KEYYKYRWVICS 170
           K  ++  + +C 
Sbjct: 163 KMPHEKHYTLCG 174

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 31  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 90
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 91  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 135
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 136 RDIKPENLLLGSAGELKIADFGWS 159

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 30  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 90  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 29  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 88
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 89  LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 134 RDIKPENLLLGSAGELKIADFGWS 157

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 27  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 87  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 28  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 88  LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS 156

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 30  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 90  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 32  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 92  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 27  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 87  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 27  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 87  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 309 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETG---------- 357
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 358 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414
Query: 158 QKEY 161
             EY
Sbjct: 415 DNEY 418

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 30  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 90  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY + G L  FL               
Sbjct: 57  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETG---------- 105
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V M+ Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 106 ---KYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 162
Query: 158 QKEY 161
             EY
Sbjct: 163 DNEY 166

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 32  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 92  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 28  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 88  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS 156

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 27  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 87  LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 28  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 88  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 133 RDIKPENLLLGSAGELKIADFGWS 156

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 32  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 91
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 92  LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 137 RDIKPENLLLGSAGELKIADFGWS 160

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 44  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 103
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 104 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 148
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWS 172

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 27  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 87  LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 27  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 86
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 87  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 132 RDIKPENLLLGSAGELKIADFGWS 155

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 53  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 112
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 113 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS 181

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 45  FCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLS 104
           FC+  H H+V +IG C + +   L+ +Y + G+LK+ L  +                S+S
Sbjct: 91  FCR--HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-----------SMS 137
Query: 105 TSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
             Q + +    A GL ++  + +IH+D+ + N L+  +   KI+  G+SK
Sbjct: 138 WEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 45  FCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLS 104
           FC+  H H+V +IG C + +   L+ +Y + G+LK+ L  +                S+S
Sbjct: 91  FCR--HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTM-----------SMS 137
Query: 105 TSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
             Q + +    A GL ++  + +IH+D+ + N L+  +   KI+  G+SK
Sbjct: 138 WEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 254

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 227 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 275
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL +   
Sbjct: 276 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIE 332
Query: 158 QKEY 161
             EY
Sbjct: 333 DNEY 336

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 60/124 (48%), Gaps = 18/124 (14%)
Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDLKQFLLATRXXXXX 91
            + +  +EI +  KLDH +VVK++ +  D   D  Y++ E  + G + +           
Sbjct: 79  PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV---------- 128
Query: 92  XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
                 P ++ LS  QA      +  G+E++  +++IH+DI   N L+  D  +KI+  G
Sbjct: 129 ------PTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFG 182
Query: 152 LSKD 155
           +S +
Sbjct: 183 VSNE 186

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 24  AREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 83
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 84  LEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVIH 128
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 129 RDIKPENLLLGSAGELKIADFGWS 152

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 256

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 249

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S    VKI   GL++D Y+   Y
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDY 247

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
           ++  F  E +L   L H  +V++  +    +P Y++ E+   G L  FL +         
Sbjct: 50  SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL- 108
Query: 94  XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
               P++   S         Q+A G+ +I  K  IH+D+ A N L+S  L  KI+  GL+
Sbjct: 109 ----PKLIDFSA--------QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA 156
Query: 154 KDTYQKEY 161
           +     EY
Sbjct: 157 RVIEDNEY 164

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 30  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 89
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 90  LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 135 RDIKPENLLLGSAGELKIADFGWS 158

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSKDDEA--LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q   +L  K L  ++ ++A   H+ +RE+++   L H +++++ G   D    YL+
Sbjct: 53  AREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 112
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LEY   G + + L                ++      +  T   ++A  L +   KR+IH
Sbjct: 113 LEYAPLGTVYRELQ---------------KLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+ S   +KI+  G S
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWS 181

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 16  QDTSVLMAKSLVHSKDD------EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           +D SV+  KSL+    +      E   EF+RE+ +   L+H ++VK+ G+    +P  ++
Sbjct: 42  KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMV 99
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--L 127
           +E+   GDL   LL               +   +  S  + +   +ALG+E++ ++   +
Sbjct: 100 MEFVPCGDLYHRLLD--------------KAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 128 IHKDIAARNCLISS 141
           +H+D+ + N  + S
Sbjct: 146 VHRDLRSPNIFLQS 159

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 16/128 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
           K+D     F  E  +  +L H+++V+++G I  +    Y++ EY   G L  +L +    
Sbjct: 225 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---- 280
Query: 89  XXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                     R RS L     +  +  V   +E++     +H+D+AARN L+S D   K+
Sbjct: 281 ----------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 330
Query: 148 SLSGLSKD 155
           S  GL+K+
Sbjct: 331 SDFGLTKE 338

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           KA D Q   V + +  + ++D+       REI L  +L H ++V +I +        L+ 
Sbjct: 39  KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98
Query: 71  EYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           E+ +  DLK+ L   +                L  SQ     YQ+  G+ H    R++H+
Sbjct: 99  EFME-KDLKKVLDENKT--------------GLQDSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 131 DIAARNCLISSDLSVKISLSGLSK 154
           D+  +N LI+SD ++K++  GL++
Sbjct: 144 DLKPQNLLINSDGALKLADFGLAR 167

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 16  QDTSVLMAKSLVHSKDD------EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           +D SV+  KSL+    +      E   EF+RE+ +   L+H ++VK+ G+    +P  ++
Sbjct: 42  KDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMV 99
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--L 127
           +E+   GDL   LL               +   +  S  + +   +ALG+E++ ++   +
Sbjct: 100 MEFVPCGDLYHRLLD--------------KAHPIKWSVKLRLMLDIALGIEYMQNQNPPI 145
Query: 128 IHKDIAARNCLISS 141
           +H+D+ + N  + S
Sbjct: 146 VHRDLRSPNIFLQS 159

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  K+ H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 60  FLQEAQVMKKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMG---------- 108
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
             EY
Sbjct: 166 DNEY 169

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           KA D Q   V + +  + ++D+       REI L  +L H ++V +I +        L+ 
Sbjct: 39  KAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98
Query: 71  EYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           E+ +  DLK+ L   +                L  SQ     YQ+  G+ H    R++H+
Sbjct: 99  EFME-KDLKKVLDENKT--------------GLQDSQIKIYLYQLLRGVAHCHQHRILHR 143
Query: 131 DIAARNCLISSDLSVKISLSGLSK 154
           D+  +N LI+SD ++K++  GL++
Sbjct: 144 DLKPQNLLINSDGALKLADFGLAR 167

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 226 FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETG---------- 274
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 275 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331
Query: 158 QKEY 161
             EY
Sbjct: 332 DNEY 335

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
           K+D     F  E  +  +L H+++V+++G I  +    Y++ EY   G L  +L +    
Sbjct: 53  KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---- 108
Query: 89  XXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                     R RS L     +  +  V   +E++     +H+D+AARN L+S D   K+
Sbjct: 109 ----------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 158
Query: 148 SLSGLSKDT 156
           S  GL+K+ 
Sbjct: 159 SDFGLTKEA 167

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
           K+D     F  E  +  +L H+++V+++G I  +    Y++ EY   G L  +L +    
Sbjct: 44  KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---- 99
Query: 89  XXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                     R RS L     +  +  V   +E++     +H+D+AARN L+S D   K+
Sbjct: 100 ----------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 149
Query: 148 SLSGLSKDT 156
           S  GL+K+ 
Sbjct: 150 SDFGLTKEA 158

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIG-ICRDGDPHYLLLEYTDWGDLKQFLLATRXX 88
           K+D     F  E  +  +L H+++V+++G I  +    Y++ EY   G L  +L +    
Sbjct: 38  KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS---- 93
Query: 89  XXXXXXXXXPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                     R RS L     +  +  V   +E++     +H+D+AARN L+S D   K+
Sbjct: 94  ----------RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKV 143
Query: 148 SLSGLSKDT 156
           S  GL+K+ 
Sbjct: 144 SDFGLTKEA 152

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
           +  +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A      
Sbjct: 53  NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91  XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                       +   +A     Q+   +++   K ++H+D+ A N L+ +D+++KI+  
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
           G S +
Sbjct: 158 GFSNE 162

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
           +  +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A      
Sbjct: 53  NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91  XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                       +   +A     Q+   +++   K ++H+D+ A N L+ +D+++KI+  
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
           G S +
Sbjct: 158 GFSNE 162

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
           +  +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A      
Sbjct: 53  NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91  XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                       +   +A     Q+   +++   K ++H+D+ A N L+ +D+++KI+  
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
           G S +
Sbjct: 158 GFSNE 162

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY   G L  FL               
Sbjct: 60  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMG---------- 108
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY 157
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++   
Sbjct: 109 ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 165
Query: 158 QKEY 161
             EY
Sbjct: 166 DNEY 169

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
           +  +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A      
Sbjct: 53  NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91  XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                       +   +A     Q+   +++   K ++H+D+ A N L+ +D+++KI+  
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
           G S +
Sbjct: 158 GFSNE 162

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
           +  +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A      
Sbjct: 53  NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG---- 108
Query: 91  XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                       +   +A     Q+   +++   K ++H+D+ A N L+ +D+++KI+  
Sbjct: 109 -----------RMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 157
Query: 151 GLSKD 155
           G S +
Sbjct: 158 GFSNE 162

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+ D  DLK+F+ A+            P 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVD-QDLKKFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P Y++ EY + G L  FL               
Sbjct: 57  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETG---------- 105
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              + L   Q V M+ Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++
Sbjct: 106 ---KYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 159

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
           +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A         
Sbjct: 57  SLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG------- 109
Query: 94  XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
                    +   +A     Q+   +++   K ++H+D+ A N L+  D+++KI+  G S
Sbjct: 110 --------RMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
Query: 154 KD 155
            +
Sbjct: 162 NE 163

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
           EA+ +F RE++    LDH +++++ G+     P  ++ E    G L          FLL 
Sbjct: 57  EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
           T                 LS       A QVA G+ ++  KR IH+D+AARN L+++   
Sbjct: 116 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 153
Query: 145 VKISLSGLSKDTYQKE 160
           VKI   GL +   Q +
Sbjct: 154 VKIGDFGLMRALPQND 169

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
           EA+ +F RE++    LDH +++++ G+     P  ++ E    G L          FLL 
Sbjct: 63  EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
           T                 LS       A QVA G+ ++  KR IH+D+AARN L+++   
Sbjct: 122 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 159
Query: 145 VKISLSGLSKDTYQKE 160
           VKI   GL +   Q +
Sbjct: 160 VKIGDFGLMRALPQND 175

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
           EA+ +F RE++    LDH +++++ G+     P  ++ E    G L          FLL 
Sbjct: 63  EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 121
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
           T                 LS       A QVA G+ ++  KR IH+D+AARN L+++   
Sbjct: 122 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 159
Query: 145 VKISLSGLSKDTYQKE 160
           VKI   GL +   Q +
Sbjct: 160 VKIGDFGLMRALPQND 175

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
           EA+ +F RE++    LDH +++++ G+     P  ++ E    G L          FLL 
Sbjct: 53  EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
           T                 LS       A QVA G+ ++  KR IH+D+AARN L+++   
Sbjct: 112 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 149
Query: 145 VKISLSGLSKDTYQKE 160
           VKI   GL +   Q +
Sbjct: 150 VKIGDFGLMRALPQND 165

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 60/125 (48%), Gaps = 15/125 (12%)
Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
           +  +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A      
Sbjct: 46  NSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--- 102
Query: 91  XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                       +   +A     Q+   +++   K ++H+D+ A N L+ +D+++KI+  
Sbjct: 103 ------------MKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADF 150
Query: 151 GLSKD 155
           G S +
Sbjct: 151 GFSNE 155

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
           EA+ +F RE++    LDH +++++ G+     P  ++ E    G L          FLL 
Sbjct: 57  EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 115
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
           T                 LS       A QVA G+ ++  KR IH+D+AARN L+++   
Sbjct: 116 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 153
Query: 145 VKISLSGLSKDTYQKE 160
           VKI   GL +   Q +
Sbjct: 154 VKIGDFGLMRALPQND 169

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
           EA+ +F RE++    LDH +++++ G+     P  ++ E    G L          FLL 
Sbjct: 53  EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
           T                 LS       A QVA G+ ++  KR IH+D+AARN L+++   
Sbjct: 112 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 149
Query: 145 VKISLSGLSKDTYQKE 160
           VKI   GL +   Q +
Sbjct: 150 VKIGDFGLMRALPQND 165

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL--------KQFLLA 84
           EA+ +F RE++    LDH +++++ G+     P  ++ E    G L          FLL 
Sbjct: 53  EAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLG 111
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
           T                 LS       A QVA G+ ++  KR IH+D+AARN L+++   
Sbjct: 112 T-----------------LS-----RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 149
Query: 145 VKISLSGLSKDTYQKE 160
           VKI   GL +   Q +
Sbjct: 150 VKIGDFGLMRALPQND 165

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query: 25  SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           S + SK+ E   E +RE+ +   + H ++V+      +    Y++++Y + GDL + + A
Sbjct: 60  SRMSSKERE---ESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINA 116
Query: 85  TRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            +                    Q +    Q+ L L+H+ D++++H+DI ++N  ++ D +
Sbjct: 117 QKGVL-------------FQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGT 163
Query: 145 VKISLSGLSK 154
           V++   G+++
Sbjct: 164 VQLGDFGIAR 173

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 21/120 (17%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH-----YLLLEYTDWGDLKQFLLATRXXXXXXXX 94
           REI +  +L+H HVVK++ I    D       Y++LE  D  D K+              
Sbjct: 101 REIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-SDFKKLFRTPVY------- 152
Query: 95  XXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
                   L+     T+ Y + +G++++    ++H+D+   NCL++ D SVK+   GL++
Sbjct: 153 --------LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 50  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 72/158 (45%), Gaps = 18/158 (11%)
Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +G+   D ++  + +A K L  +   +A  E   E  +   +   +V +++GIC      
Sbjct: 35  KGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQ 94
Query: 67  YLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L   +   R                L +   +    Q+A G+ ++ D R
Sbjct: 95  -LVTQLMPYGCLLDHVRENRG--------------RLGSQDLLNWCMQIAKGMSYLEDVR 139
Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSK--DTYQKEYY 162
           L+H+D+AARN L+ S   VKI+  GL++  D  + EY+
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYH 177

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 50  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 50  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 50  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 52  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+   N LI+++ ++K++  GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+   N LI+++ ++K++  GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 154

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 52  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 52  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 58  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 111
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 112 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 53  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 106
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 107 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 50  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 151

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 53  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 106
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 107 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 55  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 108
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 109 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 58  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 111
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 112 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 158

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 52  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 152

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 55  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 108
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 109 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 155

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 15/118 (12%)
Query: 36  HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXX 95
           H+ +RE+++   L H +++++ G   D    YL+LEY   G + + L             
Sbjct: 53  HQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL------------- 99
Query: 96  XXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
              ++      +  T   ++A  L +   K++IH+DI   N L+ S   +KI+  G S
Sbjct: 100 --QKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWS 155

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK F+ A+            P 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 48  LDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQ 107
           LDHAH+V+++G+C  G    L+ +Y   G L   +   R               +L    
Sbjct: 72  LDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG--------------ALGPQL 116
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
            +    Q+A G+ ++ +  ++H+++AARN L+ S   V+++  G++
Sbjct: 117 LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK F+ A+            P 
Sbjct: 53  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDAS-----ALTGIPLPL 106
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 107 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 153

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 48  LDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQ 107
           LDHAH+V+++G+C  G    L+ +Y   G L   +   R               +L    
Sbjct: 90  LDHAHIVRLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRG--------------ALGPQL 134
Query: 108 AVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
            +    Q+A G+ ++ +  ++H+++AARN L+ S   V+++  G++
Sbjct: 135 LLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 52  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 105
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+   N LI+++ ++K++  GL++
Sbjct: 106 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 152

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+ A+            P 
Sbjct: 53  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDAS-----ALTGIPLPL 106
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+   N LI+++ ++K++  GL++
Sbjct: 107 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 153

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F +E  +  KL H  +V++  +  + +P  ++ EY   G L  FL               
Sbjct: 50  FLQEAQVMKKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETG---------- 98
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
              + L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++  GL++
Sbjct: 99  ---KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLAR 152

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXX 92
           E ++EF RE+ +  +L H ++V  +G         ++ EY   G L + L  +       
Sbjct: 76  ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR---- 131
Query: 93  XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLS 150
                     L   + ++MAY VA G+ ++ ++   ++H+D+ + N L+    +VK+   
Sbjct: 132 --------EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDF 183
Query: 151 GLSK 154
           GLS+
Sbjct: 184 GLSR 187

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK F+ A+            P 
Sbjct: 54  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKTFMDAS-----ALTGIPLPL 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 108 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 154

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK F+ A+            P 
Sbjct: 50  REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVH-QDLKTFMDAS-----ALTGIPLPL 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K++  GL++
Sbjct: 104 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR 150

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 59/115 (51%), Gaps = 14/115 (12%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK F+ A+            P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDAS-----ALTGIPLPL 104
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           ++S          +Q+  GL      R++H+D+   N LI+++ ++K++  GL++
Sbjct: 105 IKS--------YLFQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR 151

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 24/153 (15%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F     +  KL H H+V   G+C  GD + L+ E+  +G L  +L   +           
Sbjct: 59  FFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK----------- 107
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI--------SSDLSVKISL 149
                ++    + +A Q+A  +  + +  LIH ++ A+N L+         +   +K+S 
Sbjct: 108 ---NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164
Query: 150 SGLSKDTYQKEYYKYR--WVICSNIAEGRRLNV 180
            G+S     K+  + R  WV    I   + LN+
Sbjct: 165 PGISITVLPKDILQERIPWVPPECIENPKNLNL 197

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 56  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 100
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 101 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 155

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 24/153 (15%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
           F     +  KL H H+V   G+C  GD + L+ E+  +G L  +L   +           
Sbjct: 59  FFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNK----------- 107
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI--------SSDLSVKISL 149
                ++    + +A Q+A  +  + +  LIH ++ A+N L+         +   +K+S 
Sbjct: 108 ---NCINILWKLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164
Query: 150 SGLSKDTYQKEYYKYR--WVICSNIAEGRRLNV 180
            G+S     K+  + R  WV    I   + LN+
Sbjct: 165 PGISITVLPKDILQERIPWVPPECIENPKNLNL 197

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 58  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 102
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 103 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 157

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 59  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 103
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 104 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 158

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 57  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 101
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 102 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 156

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 78  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 122
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 123 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 177

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 63  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 107
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 108 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 162

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 45.1 bits (105), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 78  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 122
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 123 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 177

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 79  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 123
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 124 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 82  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 126
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 127 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 181

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 82  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 126
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 127 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 181

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 79  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 123
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 124 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 79  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 123
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 124 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 79  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 123
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 124 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 178

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 84  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 128
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 129 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 183

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 15/125 (12%)
Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXX 90
           +  +L +  RE+ +   L+H ++VK+  +       YL+ EY   G++  +L+A      
Sbjct: 53  NSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHG---- 108
Query: 91  XXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                           +A     Q+   +++   K ++H+D+ A N L+ +D ++KI+  
Sbjct: 109 -----------RXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADF 157
Query: 151 GLSKD 155
           G S +
Sbjct: 158 GFSNE 162

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSK-DDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q+  ++  K L  S+ + E + H+ +REI++   L H ++++M     D    YL+
Sbjct: 34  AREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 93
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LE+   G+L + L                +       ++ T   ++A  L +  ++++IH
Sbjct: 94  LEFAPRGELYKELQ---------------KHGRFDEQRSATFMEELADALHYCHERKVIH 138
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+     +KI+  G S
Sbjct: 139 RDIKPENLLMGYKGELKIADFGWS 162

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 67/144 (46%), Gaps = 17/144 (11%)
Query: 12  ASDPQDTSVLMAKSLVHSK-DDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           A + Q+  ++  K L  S+ + E + H+ +REI++   L H ++++M     D    YL+
Sbjct: 33  AREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92
Query: 70  LEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           LE+   G+L + L                +       ++ T   ++A  L +  ++++IH
Sbjct: 93  LEFAPRGELYKELQ---------------KHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 130 KDIAARNCLISSDLSVKISLSGLS 153
           +DI   N L+     +KI+  G S
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWS 161

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++                +
Sbjct: 86  RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIR---------------K 130
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 131 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 185

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 14/124 (11%)
Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXX 92
           E ++EF RE+ +  +L H ++V  +G         ++ EY   G L + L  +       
Sbjct: 76  ERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAR---- 131
Query: 93  XXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLS 150
                     L   + ++MAY VA G+ ++ ++   ++H+++ + N L+    +VK+   
Sbjct: 132 --------EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDF 183
Query: 151 GLSK 154
           GLS+
Sbjct: 184 GLSR 187

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 43.9 bits (102), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   L H HVV   G   D D  +++LE      L +                  R 
Sbjct: 65  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 109
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL-SKDTYQK 159
           ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL +K  Y  
Sbjct: 110 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169
Query: 160 EYYKYRWVICSN 171
           E  K   V+C  
Sbjct: 170 ERKK---VLCGT 178

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   L H HVV   G   D D  +++LE      L +                  R 
Sbjct: 89  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 133
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL-SKDTYQK 159
           ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL +K  Y  
Sbjct: 134 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 193
Query: 160 EYYKYRWVICSN 171
           E  K   V+C  
Sbjct: 194 ERKK---VLCGT 202

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 19/132 (14%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   L H HVV   G   D D  +++LE      L +                  R 
Sbjct: 91  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 135
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL-SKDTYQK 159
           ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL +K  Y  
Sbjct: 136 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195
Query: 160 EYYKYRWVICSN 171
           E  K   V+C  
Sbjct: 196 ERKK---VLCGT 204

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 43.5 bits (101), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   L H HVV   G   D D  +++LE      L +                  R 
Sbjct: 67  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 111
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL+
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   L H HVV   G   D D  +++LE      L +                  R 
Sbjct: 67  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 111
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL+
Sbjct: 112 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 164

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 52  IKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 98  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 15/113 (13%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   L H HVV   G   D D  +++LE      L +                  R 
Sbjct: 71  EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL---------------HKRR 115
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           ++L+  +A     Q+ LG +++   R+IH+D+   N  ++ DL VKI   GL+
Sbjct: 116 KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLA 168

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
           ++  F  E ++   L H  +VK+  +    +P Y++ E+   G L  FL +         
Sbjct: 53  SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL- 110
Query: 94  XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
               P++   S         Q+A G+  I  +  IH+D+ A N L+S+ L  KI+  GL+
Sbjct: 111 ----PKLIDFSA--------QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 158
Query: 154 KDTYQKEY 161
           +     EY
Sbjct: 159 RVIEDNEY 166

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 52  IKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 98  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
           ++  F  E ++   L H  +VK+  +    +P Y++ E+   G L  FL +         
Sbjct: 226 SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL- 283
Query: 94  XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
               P++   S         Q+A G+  I  +  IH+D+ A N L+S+ L  KI+  GL+
Sbjct: 284 ----PKLIDFSA--------QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 331
Query: 154 KDTYQKEY 161
           +     EY
Sbjct: 332 RVIEDNEY 339

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           +EIDL  +L+H +V+K      + +   ++LE  D GDL + +   +            +
Sbjct: 81  KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFK------------K 128
Query: 100 VRSLSTSQAVTMAY-QVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
            + L   + V   + Q+   LEH+  +R++H+DI   N  I++   VK+   GL +
Sbjct: 129 QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGR 184

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE++L  KLDH +++K+  I  D    Y++ E    G+L   ++               +
Sbjct: 70  REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------------K 114
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS 153
            +  S   A  +  QV  G+ ++    ++H+D+   N L+ S   D  +KI   GLS
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE++L  KLDH +++K+  I  D    Y++ E    G+L   ++               +
Sbjct: 70  REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------------K 114
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS 153
            +  S   A  +  QV  G+ ++    ++H+D+   N L+ S   D  +KI   GLS
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE++L  KLDH +++K+  I  D    Y++ E    G+L   ++               +
Sbjct: 70  REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEII---------------K 114
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS 153
            +  S   A  +  QV  G+ ++    ++H+D+   N L+ S   D  +KI   GLS
Sbjct: 115 RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPR 99
           RE D+  +LDH   VK+    +D +  Y  L Y   G L +++                +
Sbjct: 81  RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIR---------------K 125
Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           + S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K
Sbjct: 126 IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK 180

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16  QDTSVLMAK--SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
            +T+V + K  ++V    +E   +F +EI +  K  H ++V+++G   DGD   L+  Y 
Sbjct: 47  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 106
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G L   L                    LS      +A   A G+  + +   IH+DI 
Sbjct: 107 PNGSLLDRL------------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIK 154
Query: 134 ARNCLISSDLSVKISLSGLSK 154
           + N L+    + KIS  GL++
Sbjct: 155 SANILLDEAFTAKISDFGLAR 175

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16  QDTSVLMAK--SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
            +T+V + K  ++V    +E   +F +EI +  K  H ++V+++G   DGD   L+  Y 
Sbjct: 53  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G L   L                    LS      +A   A G+  + +   IH+DI 
Sbjct: 113 PNGSLLDRL------------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIK 160
Query: 134 ARNCLISSDLSVKISLSGLSK 154
           + N L+    + KIS  GL++
Sbjct: 161 SANILLDEAFTAKISDFGLAR 181

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16  QDTSVLMAK--SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
            +T+V + K  ++V    +E   +F +EI +  K  H ++V+++G   DGD   L+  Y 
Sbjct: 53  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYM 112
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G L   L                    LS      +A   A G+  + +   IH+DI 
Sbjct: 113 PNGSLLDRL------------SCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIK 160
Query: 134 ARNCLISSDLSVKISLSGLSK 154
           + N L+    + KIS  GL++
Sbjct: 161 SANILLDEAFTAKISDFGLAR 181

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/178 (21%), Positives = 73/178 (41%), Gaps = 27/178 (15%)
Query: 16  QDTSVLMA-KSLVHSKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
           +DT  ++A K  + S DD+ + +   REI L  +L H ++V ++ +C+     YL+ E+ 
Sbjct: 47  KDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFV 106
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
           D   L    L                   L         +Q+  G+       +IH+DI 
Sbjct: 107 DHTILDDLELFP---------------NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 134 ARNCLISSDLSVKISLSGLSK----------DTYQKEYYKYRWVICSNIAEGRRLNVF 181
             N L+S    VK+   G ++          D     +Y+   ++  ++  G+ ++V+
Sbjct: 152 PENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVW 209

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 31/131 (23%)
Query: 39  KREIDLFCKLDHAHVVKMIGICRDG---DPH--------------YLLLEYTDWGDLKQF 81
           +RE+    KLDH ++V   G C DG   DP               ++ +E+ D G L+Q+
Sbjct: 52  EREVKALAKLDHVNIVHYNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW 110
Query: 82  LLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           +   R                L    A+ +  Q+  G+++I  K+LI++D+   N  +  
Sbjct: 111 IEKRRG-------------EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD 157
Query: 142 DLSVKISLSGL 152
              VKI   GL
Sbjct: 158 TKQVKIGDFGL 168

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 50  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 95
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 96  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 150

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 98  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 98  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 98  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 16  QDTSVLMAK--SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT 73
            +T+V + K  ++V    +E   +F +EI +  K  H ++V+++G   DGD   L+  Y 
Sbjct: 44  NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYX 103
Query: 74  DWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
             G L   L                    LS      +A   A G+  + +   IH+DI 
Sbjct: 104 PNGSLLDRL------------SCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRDIK 151
Query: 134 ARNCLISSDLSVKISLSGLSK 154
           + N L+    + KIS  GL++
Sbjct: 152 SANILLDEAFTAKISDFGLAR 172

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 98  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
           K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               P
Sbjct: 52  KKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------EP 97
Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
            +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 98  DI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 98  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 52  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 97
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 98  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 30/149 (20%)
Query: 24  KSLVHSKDD---EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ 80
           K+  H  D+   + +   ++E  LF  L H +++ + G+C       L++E+   G L +
Sbjct: 36  KAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNR 95
Query: 81  FLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDK---RLIHKDIAARNC 137
            L   R                +     V  A Q+A G+ ++ D+    +IH+D+ + N 
Sbjct: 96  VLSGKR----------------IPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNI 139
Query: 138 LI-----SSDLS---VKISLSGLSKDTYQ 158
           LI     + DLS   +KI+  GL+++ ++
Sbjct: 140 LILQKVENGDLSNKILKITDFGLAREWHR 168

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 38  FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXX 97
            K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +               
Sbjct: 51  IKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--------------E 96
Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           P +  +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS  GL+
Sbjct: 97  PDI-GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXP 98
           ++EI +  + D ++V K  G    G   ++++EY   G     L                
Sbjct: 69  QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL---------------- 112
Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           R       Q  TM  ++  GL+++  ++ IH+DI A N L+S    VK++  G++
Sbjct: 113 RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVA 167

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 29  SKDDEALHE-FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
           +K+ E  HE    EI L   LDH +++K+  +  D    YL+ E+ + G+L + ++    
Sbjct: 83  NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR-- 140
Query: 88  XXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLS 144
                               A  +  Q+  G+ ++    ++H+DI   N L+   +S L+
Sbjct: 141 -------------HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187
Query: 145 VKISLSGLS 153
           +KI   GLS
Sbjct: 188 IKIVDFGLS 196

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           ++T  ++A   V  + D  L E  +EI +  + D  HVVK  G        ++++EY   
Sbjct: 51  KETGQIVAIKQVPVESD--LQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGA 108
Query: 76  GDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G +   +                R ++L+  +  T+      GLE++   R IH+DI A 
Sbjct: 109 GSVSDIIRL--------------RNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG 154
Query: 136 NCLISSDLSVKISLSGLS 153
           N L++++   K++  G++
Sbjct: 155 NILLNTEGHAKLADFGVA 172

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 29  SKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
            K+DE +     REI +  +L H+++VK+  +        L+ E+ D  DLK+ L     
Sbjct: 37  EKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEG 95
Query: 88  XXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                          L +  A +   Q+  G+ +  D+R++H+D+  +N LI+ +  +KI
Sbjct: 96  --------------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141
Query: 148 SLSGLSK 154
           +  GL++
Sbjct: 142 ADFGLAR 148

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 29  SKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
            K+DE +     REI +  +L H+++VK+  +        L+ E+ D  DLK+ L     
Sbjct: 37  EKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEG 95
Query: 88  XXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                          L +  A +   Q+  G+ +  D+R++H+D+  +N LI+ +  +KI
Sbjct: 96  --------------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141
Query: 148 SLSGLSK 154
           +  GL++
Sbjct: 142 ADFGLAR 148

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 16/127 (12%)
Query: 29  SKDDEALHEFK-REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRX 87
            K+DE +     REI +  +L H+++VK+  +        L+ E+ D  DLK+ L     
Sbjct: 37  EKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEG 95
Query: 88  XXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                          L +  A +   Q+  G+ +  D+R++H+D+  +N LI+ +  +KI
Sbjct: 96  --------------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141
Query: 148 SLSGLSK 154
           +  GL++
Sbjct: 142 ADFGLAR 148

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 15/105 (14%)
Query: 50  HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRVRSLSTSQAV 109
           H  +++M G  +D    +++++Y + G+L   L  ++                     A 
Sbjct: 65  HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQ---------------RFPNPVAK 109
Query: 110 TMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
             A +V L LE++  K +I++D+   N L+  +  +KI+  G +K
Sbjct: 110 FYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAK 154

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   LD+ HVV   G   D D  Y++LE      L +                  R 
Sbjct: 76  EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---------------HKRR 120
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           ++++  +A     Q   G++++ + R+IH+D+   N  ++ D+ VKI   GL+
Sbjct: 121 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 173

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 34  ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXX 93
           ++  F  E ++   L H  +VK+  +    +P Y++ E+   G L  FL +         
Sbjct: 220 SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPL- 277
Query: 94  XXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
               P++   S         Q+A G+  I  +  IH+D+ A N L+S+ L  KI+  GL+
Sbjct: 278 ----PKLIDFSA--------QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA 325
Query: 154 K 154
           +
Sbjct: 326 R 326

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   LD+ HVV   G   D D  Y++LE      L +                  R 
Sbjct: 92  EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---------------HKRR 136
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           ++++  +A     Q   G++++ + R+IH+D+   N  ++ D+ VKI   GL+
Sbjct: 137 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   LD+ HVV   G   D D  Y++LE      L +                  R 
Sbjct: 92  EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---------------HKRR 136
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           ++++  +A     Q   G++++ + R+IH+D+   N  ++ D+ VKI   GL+
Sbjct: 137 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 41  EIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXXXXXXXXPRV 100
           EI +   LD+ HVV   G   D D  Y++LE      L +                  R 
Sbjct: 92  EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLEL---------------HKRR 136
Query: 101 RSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           ++++  +A     Q   G++++ + R+IH+D+   N  ++ D+ VKI   GL+
Sbjct: 137 KAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLA 189

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 103 LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           L+     T+ Y + LG + I +  +IH+D+   NCL++ D SVKI   GL++
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 40.4 bits (93), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 27/134 (20%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K++   +    + + + EI++   LDH +++K+  +  D    Y+++E  + G+L + ++
Sbjct: 53  KTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIV 112
Query: 84  ATRXXXXXXXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---S 140
           + +            R ++LS      +  Q+   L +   + ++HKD+   N L    S
Sbjct: 113 SAQA-----------RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS 161
Query: 141 SDLSVKISLSGLSK 154
               +KI   GL++
Sbjct: 162 PHSPIKIIDFGLAE 175

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 61/118 (51%), Gaps = 16/118 (13%)
Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRXXXXXXXXXX 96
           K+EI L  +L H +V++++ +  + +    Y+++EY   G +++ L +            
Sbjct: 54  KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSV----------- 101
Query: 97  XPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
            P  R     QA     Q+  GLE++  + ++HKDI   N L+++  ++KIS  G+++
Sbjct: 102 -PEKR-FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAE 157

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
           D AL+  + EI++  KL+H  ++K+     D + +Y++LE  + G+L   ++  +     
Sbjct: 182 DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 234
Query: 92  XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
                      L  +      YQ+ L ++++ +  +IH+D+   N L+SS   D  +KI+
Sbjct: 235 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 284
Query: 149 LSGLSK 154
             G SK
Sbjct: 285 DFGHSK 290

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 40.0 bits (92), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
           D AL+  + EI++  KL+H  ++K+     D + +Y++LE  + G+L   ++  +     
Sbjct: 196 DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 248
Query: 92  XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
                      L  +      YQ+ L ++++ +  +IH+D+   N L+SS   D  +KI+
Sbjct: 249 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 298
Query: 149 LSGLSK 154
             G SK
Sbjct: 299 DFGHSK 304

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
           D AL+  + EI++  KL+H  ++K+     D + +Y++LE  + G+L   ++  +     
Sbjct: 57  DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 109
Query: 92  XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
                      L  +      YQ+ L ++++ +  +IH+D+   N L+SS   D  +KI+
Sbjct: 110 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 159
Query: 149 LSGLSK 154
             G SK
Sbjct: 160 DFGHSK 165

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
           D AL+  + EI++  KL+H  ++K+     D + +Y++LE  + G+L   ++  +     
Sbjct: 57  DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 109
Query: 92  XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
                      L  +      YQ+ L ++++ +  +IH+D+   N L+SS   D  +KI+
Sbjct: 110 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 159
Query: 149 LSGLSK 154
             G SK
Sbjct: 160 DFGHSK 165

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 39.7 bits (91), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 62/126 (49%), Gaps = 20/126 (15%)
Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRXXXXX 91
           D AL+  + EI++  KL+H  ++K+     D + +Y++LE  + G+L   ++  +     
Sbjct: 56  DPALN-VETEIEILKKLNHPCIIKIKNFF-DAEDYYIVLELMEGGELFDKVVGNK----- 108
Query: 92  XXXXXXPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
                      L  +      YQ+ L ++++ +  +IH+D+   N L+SS   D  +KI+
Sbjct: 109 ----------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT 158
Query: 149 LSGLSK 154
             G SK
Sbjct: 159 DFGHSK 164

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	183
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-44
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-42
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	2e-42
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	2e-42
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	6e-42
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-41
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	2e-41
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	2e-41
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	4e-40
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-40
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	1e-39
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-38
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	2e-38
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	2e-38
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	3e-38
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	4e-38
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	5e-38
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-37
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-37
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	8e-37
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-36
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	2e-34
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	4e-34
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-33
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-33
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-33
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-33
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	4e-33
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	8e-33
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-32
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	2e-32
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-32
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-32
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-32
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-31
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	1e-31
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-31
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	2e-31
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-31
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-31
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	6e-31
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	6e-31
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	7e-31
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-30
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-30
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-29
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	3e-29
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-29
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	2e-28
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-28
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-28
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-28
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	1e-27
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-27
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	2e-22
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	7e-22
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	7e-22
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	3e-21
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-20
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-18
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-18
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-17
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-16
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	7e-16
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-15
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	3e-14
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-13
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	1e-13
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-13
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-13
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-13
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	4e-13
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	4e-13
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-12
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	2e-12
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	3e-12
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-12
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-12
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	6e-12
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	6e-12
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	9e-12
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-11
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-11
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-11
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-11
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	7e-11
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-10
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-10
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-10
3ork_A	311	Serine/threonine protein kinase; structural genomi	2e-10
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-10
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-10
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-10
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-10
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-10
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-10
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-10
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	5e-10
3niz_A	311	Rhodanese family protein; structural genomics, str	5e-10
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-10
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	8e-10
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-10
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-09
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	1e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-09
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	1e-09
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	1e-09
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-09
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-09
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	3e-09
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	4e-09
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	4e-09
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-09
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-09
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	6e-09
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	8e-09
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	9e-09
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	1e-08
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-08
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-08
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-08
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	4e-08
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	5e-08
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	5e-08
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	5e-08
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	6e-08
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	6e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-08
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	6e-08
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	7e-08
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	8e-08
3uqc_A	286	Probable conserved transmembrane protein; structur	8e-08
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-07
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-07
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-07
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-07
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-07
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-07
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	5e-07
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	7e-07
3rp9_A	458	Mitogen-activated protein kinase; structural genom	8e-07
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-06
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-06
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-06
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-06
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-06
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	2e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-06
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-06
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	3e-06
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	3e-06
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	3e-06
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-06
3fme_A	290	Dual specificity mitogen-activated protein kinase;	4e-06
3bhy_A	283	Death-associated protein kinase 3; death associate	7e-06
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	1e-05
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-05
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-05
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-05
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-05
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-05
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-05
2dyl_A	318	Dual specificity mitogen-activated protein kinase	3e-05
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	6e-05
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	7e-05
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	8e-05
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	1e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-04
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	2e-04
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-04
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-04
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	2e-04
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-04
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-04
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	4e-04
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	4e-04
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	4e-04
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-04
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	9e-04

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  147 bits (372), Expect = 8e-44
 Identities = 47/132 (35%), Positives = 75/132 (56%)

Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKD 91
           + A  +F+RE +L   L H H+V+  G+C +G P  ++ EY   GDL +FL +   D+K 
Sbjct: 84  ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKL 143

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG 151
            +G        L   Q + +A QVA G+ +++    +H+D+A RNCL+   L VKI   G
Sbjct: 144 LAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG 203

Query: 152 LSKDTYQKEYYK 163
           +S+D Y  +YY+
Sbjct: 204 MSRDIYSTDYYR 215

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  144 bits (365), Expect = 1e-42
 Identities = 50/164 (30%), Positives = 89/164 (54%), Gaps = 10/164 (6%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
                P +   ++A K L      +   +F+RE  L  + D+ ++VK++G+C  G P  L
Sbjct: 68  APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 127

Query: 69  LLEYTDWGDLKQFLLATRKDSKD---------KSGSGKPRVRSLSTSQAVTMAYQVALGL 119
           L EY  +GDL +FL +    +           ++    P    LS ++ + +A QVA G+
Sbjct: 128 LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM 187

Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
            ++S+++ +H+D+A RNCL+  ++ VKI+  GLS++ Y  +YYK
Sbjct: 188 AYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  143 bits (363), Expect = 2e-42
 Identities = 40/155 (25%), Positives = 81/155 (52%), Gaps = 6/155 (3%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
            K     +    +A K++  +       EF  E  +  + +  HVV+++G+   G P  +
Sbjct: 46  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 105

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++E    GDLK +L + R    +      P +  +     + MA ++A G+ +++  + +
Sbjct: 106 IMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM-----IQMAGEIADGMAYLNANKFV 160

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           H+D+AARNC+++ D +VKI   G+++D Y+ +YY+
Sbjct: 161 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYR 195

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  143 bits (363), Expect = 2e-42
 Identities = 42/159 (26%), Positives = 87/159 (54%), Gaps = 2/159 (1%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDP 65
           A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C    P
Sbjct: 56  AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 115

Query: 66  HYLLLEYTDWGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISD 124
            Y+++EY   G+L+++L A R    + S    +     ++    V+  YQ+A G+E+++ 
Sbjct: 116 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175

Query: 125 KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  141 bits (358), Expect = 6e-42
 Identities = 50/133 (37%), Positives = 78/133 (58%), Gaps = 1/133 (0%)

Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKD 91
             A  +F+RE +L   L H H+VK  G+C DGDP  ++ EY   GDL +FL A   D+  
Sbjct: 58  LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMI 117

Query: 92  -KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
              G  +     L  SQ + +A Q+A G+ +++ +  +H+D+A RNCL+ ++L VKI   
Sbjct: 118 LVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDF 177

Query: 151 GLSKDTYQKEYYK 163
           G+S+D Y  +YY+
Sbjct: 178 GMSRDVYSTDYYR 190

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  142 bits (359), Expect = 1e-41
 Identities = 42/159 (26%), Positives = 87/159 (54%), Gaps = 2/159 (1%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDP 65
           A G+    P++   +  K L     ++ L +   E+++   +  H +++ ++G C    P
Sbjct: 102 AVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGP 161

Query: 66  HYLLLEYTDWGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISD 124
            Y+++EY   G+L+++L A R    + S    +     ++    V+  YQ+A G+E+++ 
Sbjct: 162 LYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 221

Query: 125 KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           ++ IH+D+AARN L++ +  +KI+  GL++D    +YYK
Sbjct: 222 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  139 bits (353), Expect = 2e-41
 Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
           L    P + +  +A K+L    +     EF+ E  L  +L H +VV ++G+     P  +
Sbjct: 30  LFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 89

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRL 127
           +  Y   GDL +FL+     S   S      V+S L     V +  Q+A G+E++S   +
Sbjct: 90  IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHV 149

Query: 128 IHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           +HKD+A RN L+   L+VKIS  GL ++ Y  +YYK
Sbjct: 150 VHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYK 185

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  140 bits (355), Expect = 2e-41
 Identities = 46/149 (30%), Positives = 84/149 (56%), Gaps = 9/149 (6%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K L  +     L +   E ++  +++H HV+K+ G C    P  L++EY  +G L+ FL 
Sbjct: 59  KMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLR 118

Query: 84  ATRKDSKDKSGSG---------KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            +RK      GSG          P  R+L+    ++ A+Q++ G++++++ +L+H+D+AA
Sbjct: 119 ESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAA 178

Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           RN L++    +KIS  GLS+D Y+++ Y 
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEEDSYV 207

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  137 bits (346), Expect = 4e-40
 Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 3/143 (2%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQF 81
           K L              E+ +   +  H +VV ++G C + G P  +++E+  +G+L  +
Sbjct: 63  KMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTY 122

Query: 82  LLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           L + R +               L+    +  ++QVA G+E ++ ++ IH+D+AARN L+S
Sbjct: 123 LRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182

Query: 141 SDLSVKISLSGLSKDTYQKEYYK 163
               VKI   GL++D Y+   Y 
Sbjct: 183 EKNVVKICDFGLARDIYKDPDYV 205

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  136 bits (346), Expect = 5e-40
 Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 4/144 (2%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
           K L  S           E+ +   L +H ++V ++G C  G P  ++ EY  +GDL  FL
Sbjct: 59  KMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFL 118

Query: 83  LATRKD---SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
              R     SK      +    +L     ++ +YQVA G+  ++ K  IH+D+AARN L+
Sbjct: 119 RRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL 178

Query: 140 SSDLSVKISLSGLSKDTYQKEYYK 163
           +     KI   GL++D      Y 
Sbjct: 179 THGRITKICDFGLARDIKNDSNYV 202

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  137 bits (348), Expect = 1e-39
 Identities = 49/159 (30%), Positives = 89/159 (55%), Gaps = 2/159 (1%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDP 65
           A GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C    P
Sbjct: 90  AIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGP 149

Query: 66  HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVR-SLSTSQAVTMAYQVALGLEHISD 124
            Y+++EY   G+L+++L A R    + S +        LS+   V+ AYQVA G+E+++ 
Sbjct: 150 LYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS 209

Query: 125 KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           K+ IH+D+AARN L++ D  +KI+  GL++D +  +YYK
Sbjct: 210 KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYK 248

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  133 bits (337), Expect = 1e-38
 Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 17/161 (10%)

Query: 11  KASDPQDTSVLMA-KSL-VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH-- 66
           +      + V +A K L         + EF RE     + DH HV K++G+         
Sbjct: 43  QLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGR 102

Query: 67  ----YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI 122
                ++L +   GDL  FLLA+R               +L     V     +A G+E++
Sbjct: 103 LPIPMVILPFMKHGDLHAFLLASRIGENP---------FNLPLQTLVRFMVDIACGMEYL 153

Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           S +  IH+D+AARNC+++ D++V ++  GLS+  Y  +YY+
Sbjct: 154 SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  132 bits (335), Expect = 2e-38
 Identities = 41/161 (25%), Positives = 81/161 (50%), Gaps = 18/161 (11%)

Query: 10  LKASDPQDTSVLMA-KSL-VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH- 66
           LK  D     V  A K++ + +     + EF  E        H +V++++G+C +     
Sbjct: 55  LKQEDGTSLKV--AVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112

Query: 67  ----YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI 122
                ++L +  +GDL  +LL +R ++           + +     +     +ALG+E++
Sbjct: 113 IPKPMVILPFMKYGDLHTYLLYSRLETGP---------KHIPLQTLLKFMVDIALGMEYL 163

Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           S++  +H+D+AARNC++  D++V ++  GLSK  Y  +YY+
Sbjct: 164 SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR 204

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  133 bits (336), Expect = 2e-38
 Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 9/149 (6%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
           K L    D         E+ +  +L  H ++V ++G C    P YL+ EY  +GDL  +L
Sbjct: 81  KMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYL 140

Query: 83  LATRKDSKDKSGSGK--------PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA 134
            + R+   +     +          +  L+    +  AYQVA G+E +  K  +H+D+AA
Sbjct: 141 RSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAA 200

Query: 135 RNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           RN L++    VKI   GL++D      Y 
Sbjct: 201 RNVLVTHGKVVKICDFGLARDIMSDSNYV 229

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  132 bits (335), Expect = 3e-38
 Identities = 38/141 (26%), Positives = 64/141 (45%), Gaps = 2/141 (1%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
           K L  +   +       E+ +   L  H ++V ++G C  G P  ++ EY  +GDL  FL
Sbjct: 82  KMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFL 141

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
               +  +           + ST   +  + QVA G+  ++ K  IH+D+AARN L+++ 
Sbjct: 142 RRKSRVLETDPAFAIAN-STASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNG 200

Query: 143 LSVKISLSGLSKDTYQKEYYK 163
              KI   GL++D      Y 
Sbjct: 201 HVAKIGDFGLARDIMNDSNYI 221

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  132 bits (334), Expect = 4e-38
 Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 12/158 (7%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
           +       + + +A K+L     ++   +F  E  +  K +H ++V+ IG+     P ++
Sbjct: 51  VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 110

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           L+E    GDLK FL  TR      S        SL+    + +A  +A G +++ +   I
Sbjct: 111 LMELMAGGDLKSFLRETRPRPSQPS--------SLAMLDLLHVARDIACGCQYLEENHFI 162

Query: 129 HKDIAARNCLIS---SDLSVKISLSGLSKDTYQKEYYK 163
           H+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 163 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYR 200

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  132 bits (335), Expect = 5e-38
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 12/158 (7%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
           +       + + +A K+L     ++   +F  E  +  K +H ++V+ IG+     P ++
Sbjct: 92  VSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFI 151

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           LLE    GDLK FL  TR      S        SL+    + +A  +A G +++ +   I
Sbjct: 152 LLELMAGGDLKSFLRETRPRPSQPS--------SLAMLDLLHVARDIACGCQYLEENHFI 203

Query: 129 HKDIAARNCLIS---SDLSVKISLSGLSKDTYQKEYYK 163
           H+DIAARNCL++        KI   G+++D Y+  YY+
Sbjct: 204 HRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYR 241

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  131 bits (331), Expect = 1e-37
 Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 5/142 (3%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
           K +      +   +F  E+++ CKL  H +++ ++G C      YL +EY   G+L  FL
Sbjct: 58  KRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 117

Query: 83  LATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
             +R    D + +      S LS+ Q +  A  VA G++++S K+ IH+D+AARN L+  
Sbjct: 118 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 177

Query: 142 DLSVKISLSGLSKDTYQKEYYK 163
           +   KI+  GLS+     E Y 
Sbjct: 178 NYVAKIADFGLSRGQ---EVYV 196

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  128 bits (325), Expect = 5e-37
 Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 18/156 (11%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-PHY 67
           L  +D +      A KSL    D   + +F  E  +     H +V+ ++GIC   +    
Sbjct: 46  LLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103

Query: 68  LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL 127
           ++L Y   GDL+ F+                   + +    +    QVA G+++++ K+ 
Sbjct: 104 VVLPYMKHGDLRNFIRNET--------------HNPTVKDLIGFGLQVAKGMKYLASKKF 149

Query: 128 IHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           +H+D+AARNC++    +VK++  GL++D Y KEYY 
Sbjct: 150 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS 185

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  129 bits (327), Expect = 8e-37
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 18/158 (11%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-PHY 67
           L  +D +      A KSL    D   + +F  E  +     H +V+ ++GIC   +    
Sbjct: 110 LLDNDGKKIHC--AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167

Query: 68  LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL 127
           ++L Y   GDL+ F+                   + +    +    QVA G++ ++ K+ 
Sbjct: 168 VVLPYMKHGDLRNFIRNET--------------HNPTVKDLIGFGLQVAKGMKFLASKKF 213

Query: 128 IHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           +H+D+AARNC++    +VK++  GL++D Y KE+    
Sbjct: 214 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 251

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  126 bits (319), Expect = 3e-36
 Identities = 44/157 (28%), Positives = 82/157 (52%), Gaps = 16/157 (10%)

Query: 11  KASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH-YL 68
           +  D     +  A KSL    + + +  F RE  L   L+H +V+ +IGI    +   ++
Sbjct: 41  EYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           LL Y   GDL QF+ + +              R+ +    ++   QVA G+E++++++ +
Sbjct: 101 LLPYMCHGDLLQFIRSPQ--------------RNPTVKDLISFGLQVARGMEYLAEQKFV 146

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           H+D+AARNC++    +VK++  GL++D   +EYY  +
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  122 bits (308), Expect = 2e-34
 Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 19/143 (13%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQF 81
           K+L      +    +K+EID+   L H H++K  G C         L++EY   G L+ +
Sbjct: 66  KALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY 125

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L                   S+  +Q +  A Q+  G+ ++  +  IH+D+AARN L+ +
Sbjct: 126 L----------------PRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDN 169

Query: 142 DLSVKISLSGLSKDTYQ-KEYYK 163
           D  VKI   GL+K   +  EYY+
Sbjct: 170 DRLVKIGDFGLAKAVPEGHEYYR 192

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  121 bits (306), Expect = 4e-34
 Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 17/156 (10%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
           L+    +D  V  A K+L     +    +F  E  +  + DH +++++ G+   G    +
Sbjct: 70  LRVPGQRDVPV--AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           + EY + G L  FL              +      +  Q V M   V  G+ ++SD   +
Sbjct: 128 VTEYMENGSLDTFL--------------RTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYV 173

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY 164
           H+D+AARN L+ S+L  K+S  GLS+         Y
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAY 209

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  119 bits (300), Expect = 2e-33
 Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 18/155 (11%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
                 +  +V  A K+       +   +F  E  +   LDH H+VK+IGI  + +P ++
Sbjct: 33  YTNHKGEKINV--AVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII-EEEPTWI 89

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++E   +G+L  +L         +      +V +L     V  + Q+   + ++     +
Sbjct: 90  IMELYPYGELGHYL---------ERNKNSLKVLTL-----VLYSLQICKAMAYLESINCV 135

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           H+DIA RN L++S   VK+   GLS+    ++YYK
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYK 170

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  121 bits (305), Expect = 2e-33
 Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           KS   +   +   +F +E  +  +  H ++V++IG+C    P Y+++E    GD   FL 
Sbjct: 145 KSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL- 203

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                        +     L     + M    A G+E++  K  IH+D+AARNCL++   
Sbjct: 204 -------------RTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKN 250

Query: 144 SVKISLSGLSKDTYQKEYYK 163
            +KIS  G+S++     Y  
Sbjct: 251 VLKISDFGMSREEADGVYAA 270

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  120 bits (303), Expect = 3e-33
 Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 17/156 (10%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
           LK    ++ SV  A K+L     ++   +F  E  +  + DH +++++ G+     P  +
Sbjct: 66  LKLPSKKEISV--AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           + EY + G L  FL         +    +      +  Q V M   +A G++++SD   +
Sbjct: 124 VTEYMENGSLDSFL---------RKHDAQ-----FTVIQLVGMLRGIASGMKYLSDMGYV 169

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY 164
           H+D+AARN LI+S+L  K+S  GL +         Y
Sbjct: 170 HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAY 205

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  118 bits (298), Expect = 3e-33
 Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 18/155 (11%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
             + +    +V  A K+  +   D    +F +E     + DH H+VK+IG+    +P ++
Sbjct: 36  YMSPENPALAV--AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWI 92

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++E    G+L+ FL   +               SL  +  +  AYQ++  L ++  KR +
Sbjct: 93  IMELCTLGELRSFLQVRK--------------YSLDLASLILYAYQLSTALAYLESKRFV 138

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           H+DIAARN L+SS+  VK+   GLS+      YYK
Sbjct: 139 HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 173

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  118 bits (298), Expect = 4e-33
 Identities = 44/162 (27%), Positives = 78/162 (48%), Gaps = 18/162 (11%)

Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGD 64
                 +  +T   +A KSL        + + K+EI++   L H ++VK  GIC    G+
Sbjct: 39  LCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98

Query: 65  PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD 124
              L++E+   G LK++L   +                ++  Q +  A Q+  G++++  
Sbjct: 99  GIKLIMEFLPSGSLKEYLPKNKN--------------KINLKQQLKYAVQICKGMDYLGS 144

Query: 125 KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-KEYYKYR 165
           ++ +H+D+AARN L+ S+  VKI   GL+K     KEYY  +
Sbjct: 145 RQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVK 186

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  117 bits (296), Expect = 8e-33
 Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 24/144 (16%)

Query: 33  EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDK 92
                F     +  KL H H+V   G+C  GD + L+ E+  +G L  +L   +      
Sbjct: 54  NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNK------ 107

Query: 93  SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD--------LS 144
                     ++    + +A Q+A  +  + +  LIH ++ A+N L+  +          
Sbjct: 108 --------NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF 159

Query: 145 VKISLSGLSKDTYQKEYYKY--RW 166
           +K+S  G+S     K+  +    W
Sbjct: 160 IKLSDPGISITVLPKDILQERIPW 183

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  117 bits (296), Expect = 1e-32
 Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K L  +   +A  E   E  +   +D+ HV +++GIC       L+ +   +G L  ++ 
Sbjct: 50  KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYV- 107

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
              ++ KD           + +   +    Q+A G+ ++ D+RL+H+D+AARN L+ +  
Sbjct: 108 ---REHKDN----------IGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ 154

Query: 144 SVKISLSGLSKDTYQKEYY 162
            VKI+  GL+K    +E  
Sbjct: 155 HVKITDFGLAKLLGAEEKE 173

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  117 bits (295), Expect = 2e-32
 Identities = 35/142 (24%), Positives = 68/142 (47%), Gaps = 14/142 (9%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+L     ++   +F  E  +  +  H +++++ G+     P  ++ EY + G L +FL 
Sbjct: 79  KTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFL- 137

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                   +   G+      S  Q V M   +A G++++++   +H+D+AARN L++S+L
Sbjct: 138 --------REKDGE-----FSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNL 184

Query: 144 SVKISLSGLSKDTYQKEYYKYR 165
             K+S  GLS+         Y 
Sbjct: 185 VCKVSDFGLSRVLEDDPEATYT 206

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  115 bits (291), Expect = 3e-32
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 14/127 (11%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           EF +E     KL H  +VK  G+C    P Y++ EY   G L  +L              
Sbjct: 49  EFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-------------- 94

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
           +   + L  SQ + M Y V  G+  +   + IH+D+AARNCL+  DL VK+S  G+++  
Sbjct: 95  RSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV 154

Query: 157 YQKEYYK 163
              +Y  
Sbjct: 155 LDDQYVS 161

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  115 bits (290), Expect = 4e-32
 Identities = 30/127 (23%), Positives = 61/127 (48%), Gaps = 14/127 (11%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           +F  E ++  KL H  +V++ G+C +  P  L+ E+ + G L  +L              
Sbjct: 49  DFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-------------- 94

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
           + +    +    + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S  G+++  
Sbjct: 95  RTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFV 154

Query: 157 YQKEYYK 163
              +Y  
Sbjct: 155 LDDQYTS 161

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  115 bits (290), Expect = 4e-32
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
           +   +  EF  E  +   L H  +V++ G+C    P +++ EY   G L  +L       
Sbjct: 58  EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL------- 110

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
             +    +       T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S 
Sbjct: 111 --REMRHR-----FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSD 163

Query: 150 SGLSKDTYQKEYYK 163
            GLS+     EY  
Sbjct: 164 FGLSRYVLDDEYTS 177

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  115 bits (289), Expect = 1e-31
 Identities = 44/143 (30%), Positives = 73/143 (51%), Gaps = 18/143 (12%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQF 81
           K L HS ++  L +F+REI++   L H ++VK  G+C         L++EY  +G L+ +
Sbjct: 76  KKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 134

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L   ++               +   + +    Q+  G+E++  KR IH+D+A RN L+ +
Sbjct: 135 LQKHKE--------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 180

Query: 142 DLSVKISLSGLSKD-TYQKEYYK 163
           +  VKI   GL+K     KEYYK
Sbjct: 181 ENRVKIGDFGLTKVLPQDKEYYK 203

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  118 bits (298), Expect = 1e-31
 Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 15/140 (10%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K+  +   D    +F +E     + DH H+VK+IG+    +P ++++E    G+L+ FL 
Sbjct: 424 KTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQ 482

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
             +               SL  +  +  AYQ++  L ++  KR +H+DIAARN L+SS+ 
Sbjct: 483 VRK--------------FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSND 528

Query: 144 SVKISLSGLSKDTYQKEYYK 163
            VK+   GLS+      YYK
Sbjct: 529 CVKLGDFGLSRYMEDSTYYK 548

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  114 bits (287), Expect = 2e-31
 Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 18/143 (12%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHYLLLEYTDWGDLKQF 81
           K L HS ++  L +F+REI++   L H ++VK  G+C         L++EY  +G L+ +
Sbjct: 45  KKLQHSTEEH-LRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDY 103

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L   ++               +   + +    Q+  G+E++  KR IH+D+A RN L+ +
Sbjct: 104 LQKHKE--------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN 149

Query: 142 DLSVKISLSGLSKD-TYQKEYYK 163
           +  VKI   GL+K     KE++K
Sbjct: 150 ENRVKIGDFGLTKVLPQDKEFFK 172

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  113 bits (286), Expect = 2e-31
 Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 16/141 (11%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K L    +     E  RE  +  +LD+ ++V++IG+C   +   L++E    G L +FL+
Sbjct: 43  KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV 101

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
             R                +  S    + +QV++G++++ +K  +H+D+AARN L+ +  
Sbjct: 102 GKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH 147

Query: 144 SVKISLSGLSKDTYQKE-YYK 163
             KIS  GLSK     + YY 
Sbjct: 148 YAKISDFGLSKALGADDSYYT 168

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  113 bits (285), Expect = 3e-31
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 17/141 (12%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH-YLLLEYTDWGDLKQFLLATRKD 88
           K+D     F  E  +  +L H+++V+++G+  +     Y++ EY   G L  +L      
Sbjct: 53  KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL------ 106

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
              +S         L     +  +  V   +E++     +H+D+AARN L+S D   K+S
Sbjct: 107 ---RSRGRSV----LGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS 159

Query: 149 LSGLSKDTYQKEYYK---YRW 166
             GL+K+    +       +W
Sbjct: 160 DFGLTKEASSTQDTGKLPVKW 180

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  113 bits (286), Expect = 4e-31
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 15/139 (10%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K +      ++       +     LDHAH+V+++G+C  G    L+ +Y   G L   + 
Sbjct: 48  KVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVR 106

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
             R               +L     +    Q+A G+ ++ +  ++H+++AARN L+ S  
Sbjct: 107 QHR--------------GALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPS 152

Query: 144 SVKISLSGLSKDTYQKEYY 162
            V+++  G++      +  
Sbjct: 153 QVQVADFGVADLLPPDDKQ 171

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  113 bits (285), Expect = 6e-31
 Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 15/139 (10%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K L  +   +A  E   E  +   +D+ HV +++GIC       L+ +   +G L  ++ 
Sbjct: 50  KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL-TSTVQLITQLMPFGCLLDYVR 108

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
             +               ++ +   +    Q+A G+ ++ D+RL+H+D+AARN L+ +  
Sbjct: 109 EHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ 154

Query: 144 SVKISLSGLSKDTYQKEYY 162
            VKI+  GL+K    +E  
Sbjct: 155 HVKITDFGLAKLLGAEEKE 173

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  113 bits (285), Expect = 6e-31
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 19/162 (11%)

Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GD 64
                    +T  L+A K L HS  D    +F+REI +   L    +VK  G+       
Sbjct: 41  LCRYDPLGDNTGALVAVKQLQHSGPD-QQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99

Query: 65  PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD 124
              L++EY   G L+ FL   R                L  S+ +  + Q+  G+E++  
Sbjct: 100 SLRLVMEYLPSGCLRDFLQRHRA--------------RLDASRLLLYSSQICKGMEYLGS 145

Query: 125 KRLIHKDIAARNCLISSDLSVKISLSGLSKD-TYQKEYYKYR 165
           +R +H+D+AARN L+ S+  VKI+  GL+K     K+YY  R
Sbjct: 146 RRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVR 187

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  112 bits (282), Expect = 7e-31
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 21/143 (14%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
              +   F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL        
Sbjct: 48  GSMSPDAFLAEANLMKQLQHQRLVRLYAVV-TQEPIYIITEYMENGSLVDFL-------- 98

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
            K+ SG      L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+  
Sbjct: 99  -KTPSGI----KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADF 153

Query: 151 GLSKDTYQKEYYK-------YRW 166
           GL++     EY          +W
Sbjct: 154 GLARLIEDNEYTAREGAKFPIKW 176

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  111 bits (280), Expect = 1e-30
 Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 13/127 (10%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L    +         
Sbjct: 55  EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR--------- 105

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT 156
               + +S    + MA Q++  +E++  K  IH+D+AARNCL+  +  VK++  GLS+  
Sbjct: 106 ----QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM 161

Query: 157 YQKEYYK 163
               Y  
Sbjct: 162 TGDTYTA 168

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  110 bits (278), Expect = 4e-30
 Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 17/134 (12%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
           D     E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L   +++  
Sbjct: 58  DPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL---QQN-- 111

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                     R +     + + +QV++G++++ +   +H+D+AARN L+ +    KIS  
Sbjct: 112 ----------RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDF 161

Query: 151 GLSKDTYQKE-YYK 163
           GLSK     E YYK
Sbjct: 162 GLSKALRADENYYK 175

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  112 bits (281), Expect = 2e-29
 Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 16/141 (11%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K L    +     E  RE  +  +LD+ ++V++IG+C   +   L++E    G L +FL+
Sbjct: 369 KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV 427

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
             R                +  S    + +QV++G++++ +K  +H+++AARN L+ +  
Sbjct: 428 GKR--------------EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRH 473

Query: 144 SVKISLSGLSKDTYQKE-YYK 163
             KIS  GLSK     + YY 
Sbjct: 474 YAKISDFGLSKALGADDSYYT 494

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  111 bits (278), Expect = 3e-29
 Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 20/143 (13%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
           D   + EF +E  +  ++ H ++V+++G+C    P Y++ E+  +G+L  +L    +   
Sbjct: 256 DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR--- 312

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                     + +S    + MA Q++  +E++  K  IH+++AARNCL+  +  VK++  
Sbjct: 313 ----------QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADF 362

Query: 151 GLSKDTYQKEYYK-------YRW 166
           GLS+      Y          +W
Sbjct: 363 GLSRLMTGDTYTAHAGAKFPIKW 385

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  110 bits (277), Expect = 4e-29
 Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 17/141 (12%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRKD 88
           K+D     F  E  +  +L H+++V+++G+   +    Y++ EY   G L  +L   R  
Sbjct: 225 KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL---RSR 281

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
            +            L     +  +  V   +E++     +H+D+AARN L+S D   K+S
Sbjct: 282 GR----------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS 331

Query: 149 LSGLSKDTYQKEYYK---YRW 166
             GL+K+    +       +W
Sbjct: 332 DFGLTKEASSTQDTGKLPVKW 352

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  109 bits (273), Expect = 2e-28
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 21/144 (14%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
               +   F +E  +  KL H  +V++  +    +P Y++ EY   G L  FL       
Sbjct: 301 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL------- 352

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
             K  +GK     L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++ 
Sbjct: 353 --KGETGK----YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVAD 406

Query: 150 SGLSKDTYQKEYYK-------YRW 166
            GL++     EY          +W
Sbjct: 407 FGLARLIEDNEYTARQGAKFPIKW 430

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  108 bits (271), Expect = 2e-28
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 14/134 (10%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
               +   F +E  +  KL H  +V++  +    +P Y++ EY   G L  FL       
Sbjct: 218 PGTMSPEAFLQEAQVMKKLRHEKLVQLYAVV-SEEPIYIVTEYMSKGSLLDFL------- 269

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
             K  +GK     L   Q V MA Q+A G+ ++     +H+D+ A N L+  +L  K++ 
Sbjct: 270 --KGETGK----YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVAD 323

Query: 150 SGLSKDTYQKEYYK 163
            GL++     EY  
Sbjct: 324 FGLARLIEDNEYTA 337

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  107 bits (270), Expect = 4e-28
 Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 21/144 (14%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
               ++  F  E ++   L H  +VK+  +    +P Y++ E+   G L  FL       
Sbjct: 222 PGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFL------- 273

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
             KS  G          + +  + Q+A G+  I  +  IH+D+ A N L+S+ L  KI+ 
Sbjct: 274 --KSDEGSK----QPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIAD 327

Query: 150 SGLSKDTYQKEYYK-------YRW 166
            GL++     EY          +W
Sbjct: 328 FGLARVIEDNEYTAREGAKFPIKW 351

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  105 bits (264), Expect = 4e-28
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 16/136 (11%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
             EA+ +F RE++    LDH +++++ G+     P  ++ E    G L   L   +    
Sbjct: 61  QPEAMDDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQ---- 115

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                                A QVA G+ ++  KR IH+D+AARN L+++   VKI   
Sbjct: 116 ----------GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF 165

Query: 151 GLSKDTYQKE-YYKYR 165
           GL +   Q + +Y  +
Sbjct: 166 GLMRALPQNDDHYVMQ 181

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score =  105 bits (263), Expect = 1e-27
 Identities = 43/202 (21%), Positives = 79/202 (39%), Gaps = 53/202 (26%)

Query: 15  PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGIC-RDGDPHYLLLEY 72
                 +  K L              E+ +   +  H +VV ++G C + G P  +++E+
Sbjct: 49  TATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEF 108

Query: 73  TDWGDLKQFLLATRKDSKDKSGSG-----------------KPRVRSLSTSQA------- 108
             +G+L  +L + R +       G                 K R+ S+++SQ+       
Sbjct: 109 CKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFV 168

Query: 109 ---------------------------VTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
                                      +  ++QVA G+E ++ ++ IH+D+AARN L+S 
Sbjct: 169 EEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 228

Query: 142 DLSVKISLSGLSKDTYQKEYYK 163
              VKI   GL++D Y+   Y 
Sbjct: 229 KNVVKICDFGLARDIYKDPDYV 250

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  103 bits (258), Expect = 3e-27
 Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 14/138 (10%)

Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           +T  +M    +   D+E    F +E+ +   L+H +V+K IG+         + EY   G
Sbjct: 33  ETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGG 92

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L+  +       K               SQ V+ A  +A G+ ++    +IH+D+ + N
Sbjct: 93  TLRGII-------KSMDSQ-------YPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHN 138

Query: 137 CLISSDLSVKISLSGLSK 154
           CL+  + +V ++  GL++
Sbjct: 139 CLVRENKNVVVADFGLAR 156

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 90.0 bits (224), Expect = 2e-22
 Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 18/141 (12%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL--EYTDWGDLKQFLLATRKD 88
                 +F  E        H +V+ ++G C+     +  L   +  +G L   L      
Sbjct: 47  STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLH----- 101

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLISSDLSVK 146
                   +     +  SQAV  A  +A G+   H  +  +    + +R+ +I  D++ +
Sbjct: 102 --------EGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTAR 153

Query: 147 ISLSGLSKDTYQK-EYYKYRW 166
           IS++ +          Y   W
Sbjct: 154 ISMADVKFSFQSPGRMYAPAW 174

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 88.9 bits (221), Expect = 7e-22
 Identities = 24/144 (16%), Positives = 52/144 (36%), Gaps = 23/144 (15%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
             + L  FK E+ +  K  H +++  +G         ++ ++ +   L   L        
Sbjct: 60  TPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQWCEGSSLYHHL-------- 110

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS-- 148
                           + + +A Q A G++++  K +IH+D+ + N  +  D +VKI   
Sbjct: 111 ------HASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDF 164

Query: 149 -LSGLSKDTYQKEYYK-----YRW 166
            L+           ++       W
Sbjct: 165 GLATEKSRWSGSHQFEQLSGSILW 188

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 87.4 bits (217), Expect = 3e-21
 Identities = 31/144 (21%), Positives = 57/144 (39%), Gaps = 20/144 (13%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
             E ++EF RE+ +  +L H ++V  +G         ++ EY   G L + L        
Sbjct: 74  HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLH------- 126

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLISSDLSVKIS 148
                       L   + ++MAY VA G+   H  +  ++H+++ + N L+    +VK+ 
Sbjct: 127 -----KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVC 181

Query: 149 LSGLSKDTYQKEYYK------YRW 166
             GLS+                 W
Sbjct: 182 DFGLSRLKASTFLSSKSAAGTPEW 205

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 85.4 bits (212), Expect = 1e-20
 Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 34/161 (21%)

Query: 24  KSLVHSKDDE---ALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ 80
           K+  H  D++    +   ++E  LF  L H +++ + G+C       L++E+   G L +
Sbjct: 36  KAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNR 95

Query: 81  FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI---SDKRLIHKDIAARNC 137
            L                  + +     V  A Q+A G+ ++   +   +IH+D+ + N 
Sbjct: 96  VL----------------SGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNI 139

Query: 138 LIS--------SDLSVKISLSGLSKDTYQKEYYK----YRW 166
           LI         S+  +KI+  GL+++ ++         Y W
Sbjct: 140 LILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAW 180

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 79.7 bits (197), Expect = 2e-18
 Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 23/138 (16%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
           ++  E   EF+RE+ +   L+H ++VK+ G+    +P  +++E+   GDL   LL     
Sbjct: 61  TEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLD---- 114

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLISS----- 141
                     +   +  S  + +   +ALG+E     +  ++H+D+ + N  + S     
Sbjct: 115 ----------KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENA 164

Query: 142 DLSVKISLSGLSKDTYQK 159
            +  K++  GLS+ +   
Sbjct: 165 PVCAKVADFGLSQQSVHS 182

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 80.1 bits (198), Expect = 2e-18
 Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 15/124 (12%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
           +++ L  FKRE+  + +  H +VV  +G C       ++        L   +   +    
Sbjct: 69  NEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAK---- 124

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                       L  ++   +A ++  G+ ++  K ++HKD+ ++N     +  V I+  
Sbjct: 125 ----------IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDF 173

Query: 151 GLSK 154
           GL  
Sbjct: 174 GLFS 177

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 77.4 bits (191), Expect = 1e-17
 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 18/130 (13%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
           + +     F  E+    +++H ++VK+ G C   +P  L++EY + G L   L       
Sbjct: 40  ESESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLP 97

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI---SDKRLIHKDIAARNCLISSDLSV- 145
                         + + A++   Q + G+ ++     K LIH+D+   N L+ +  +V 
Sbjct: 98  Y------------YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVL 145

Query: 146 KISLSGLSKD 155
           KI   G + D
Sbjct: 146 KICDFGTACD 155

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 73.1 bits (180), Expect = 4e-16
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 11/130 (8%)

Query: 25  SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
            +    D +A  +  +EIDL  +L+H +V+K      + +   ++LE  D GDL + +  
Sbjct: 66  QIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH 125

Query: 85  TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            +K  +            +          Q+   LEH+  +R++H+DI   N  I++   
Sbjct: 126 FKKQKR-----------LIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGV 174

Query: 145 VKISLSGLSK 154
           VK+   GL +
Sbjct: 175 VKLGDLGLGR 184

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 72.8 bits (179), Expect = 7e-16
 Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 15/125 (12%)

Query: 27  VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH----YLLLEYTDWGDLKQFL 82
           +   + +   E +RE D+    +H ++++++  C          +LLL +   G L   +
Sbjct: 62  ILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEI 121

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
               KD  +           L+  Q + +   +  GLE I  K   H+D+   N L+  +
Sbjct: 122 -ERLKDKGNF----------LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDE 170

Query: 143 LSVKI 147
               +
Sbjct: 171 GQPVL 175

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 71.7 bits (176), Expect = 2e-15
 Identities = 24/128 (18%), Positives = 61/128 (47%), Gaps = 13/128 (10%)

Query: 27  VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR 86
           +     +   E +RE+ +   + H ++V+      +    Y++++Y + GDL + + A +
Sbjct: 59  ISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQK 118

Query: 87  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
                               Q +    Q+ L L+H+ D++++H+DI ++N  ++ D +V+
Sbjct: 119 G-------------VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQ 165

Query: 147 ISLSGLSK 154
           +   G+++
Sbjct: 166 LGDFGIAR 173

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 68.2 bits (167), Expect = 3e-14
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 28/138 (20%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD---PHYLL-LEYTDWGDLKQFLLA 84
              +EA    + EI     + H +++  I     G        L  +Y + G L  +L  
Sbjct: 69  FTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL-- 126

Query: 85  TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL--------IHKDIAARN 136
                         +  +L     + +AY    GL H+  +           H+D+ ++N
Sbjct: 127 --------------KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKN 172

Query: 137 CLISSDLSVKISLSGLSK 154
            L+  + +  I+  GL+ 
Sbjct: 173 ILVKKNGTCCIADLGLAV 190

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 66.7 bits (163), Expect = 1e-13
 Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 28/138 (20%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGIC---RDGDPHYLL-LEYTDWGDLKQFLLA 84
           S  +E     + EI     L H +++  I              L  +Y + G L  +L  
Sbjct: 74  SSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-- 131

Query: 85  TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI--------SDKRLIHKDIAARN 136
                            +++    + +A   A GL H+            + H+D+ ++N
Sbjct: 132 --------------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 177

Query: 137 CLISSDLSVKISLSGLSK 154
            L+  + +  I+  GL+ 
Sbjct: 178 ILVKKNGTCCIADLGLAV 195

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 66.3 bits (162), Expect = 2e-13
 Identities = 25/140 (17%), Positives = 57/140 (40%), Gaps = 30/140 (21%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD----PHYLLLEYTDWGDLKQFLLA 84
              D+   + + E+     + H ++++ IG  + G       +L+  + + G L  FL  
Sbjct: 56  PIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-- 113

Query: 85  TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI----------SDKRLIHKDIAA 134
                         +   +S ++   +A  +A GL ++              + H+DI +
Sbjct: 114 --------------KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKS 159

Query: 135 RNCLISSDLSVKISLSGLSK 154
           +N L+ ++L+  I+  GL+ 
Sbjct: 160 KNVLLKNNLTACIADFGLAL 179

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 65.5 bits (160), Expect = 3e-13
 Identities = 23/126 (18%), Positives = 50/126 (39%), Gaps = 8/126 (6%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
                  +FK E+ +   + + + +   GI  + D  Y++ EY +   + +F        
Sbjct: 82  SIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAARNCLISSDLSVKIS 148
           K+ +         +       +   V     +I ++K + H+D+   N L+  +  VK+S
Sbjct: 142 KNYTC-------FIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLS 194

Query: 149 LSGLSK 154
             G S+
Sbjct: 195 DFGESE 200

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 64.7 bits (158), Expect = 4e-13
 Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 30/138 (21%)

Query: 31  DDEALHEFKREIDLF--CKLDHAHVVKMIGICRDGD----PHYLLLEYTDWGDLKQFLLA 84
                  + RE +L+    L H +++  I             +L+  Y + G L  +L  
Sbjct: 40  SSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-- 97

Query: 85  TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI--------SDKRLIHKDIAARN 136
                         ++ +L T   + +   +A GL H+            + H+D+ ++N
Sbjct: 98  --------------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN 143

Query: 137 CLISSDLSVKISLSGLSK 154
            L+  +    I+  GL+ 
Sbjct: 144 ILVKKNGQCCIADLGLAV 161

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 64.6 bits (158), Expect = 4e-13
 Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 15/119 (12%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
            + +E L  F+RE+    +L H ++V MI +  + D +YL++EY +   L +++ +    
Sbjct: 49  REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP- 107

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                         LS   A+    Q+  G++H  D R++H+DI  +N LI S+ ++KI
Sbjct: 108 --------------LSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKI 152

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 64.6 bits (158), Expect = 4e-13
 Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 17/141 (12%)

Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
              V +A   +  +D         EI L   L H ++V+ +G   +     + +E    G
Sbjct: 45  SNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG 104

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAY--QVALGLEHISDKRLIHKDIAA 134
            L   L              + +   L  ++     Y  Q+  GL+++ D +++H+DI  
Sbjct: 105 SLSALL--------------RSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKG 150

Query: 135 RNCLISSDL-SVKISLSGLSK 154
            N LI++    +KIS  G SK
Sbjct: 151 DNVLINTYSGVLKISDFGTSK 171

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 63.5 bits (155), Expect = 1e-12
 Identities = 28/156 (17%), Positives = 58/156 (37%), Gaps = 24/156 (15%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH---- 66
           +A +  D      K +     + A  +  RE+    KL+H  +V+      + +      
Sbjct: 23  EAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82

Query: 67  --------YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALG 118
                   Y+ ++     +LK ++            +G+  +     S  + +  Q+A  
Sbjct: 83  PSSPKVYLYIQMQLCRKENLKDWM------------NGRCTIEERERSVCLHIFLQIAEA 130

Query: 119 LEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           +E +  K L+H+D+   N   + D  VK+   GL  
Sbjct: 131 VEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT 166

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 11/121 (9%)

Query: 35  LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSG 94
           + EF+ EI+      H H+V +IG C + +   L+ +Y + G+LK+ L           G
Sbjct: 79  IEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHL----------YG 128

Query: 95  SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK 154
           S  P + S+S  Q + +    A GL ++  + +IH+D+ + N L+  +   KI+  G+SK
Sbjct: 129 SDLPTM-SMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK 187

Query: 155 D 155
            
Sbjct: 188 K 188

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 62.4 bits (152), Expect = 3e-12
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 19/128 (14%)

Query: 29  SKDDEALHEFKREIDLFCKLDH--AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR 86
             D++ L  ++ EI    KL      ++++          Y+++E  +  DL  +L    
Sbjct: 45  EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-IDLNSWL---- 99

Query: 87  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
              K K        +S+   +  +    +   +  I    ++H D+   N LI     +K
Sbjct: 100 ---KKK--------KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLK 147

Query: 147 ISLSGLSK 154
           +   G++ 
Sbjct: 148 LIDFGIAN 155

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 61.9 bits (151), Expect = 4e-12
 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 29/132 (21%)

Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPH----------------YLLLEYTDWGDLKQFL 82
           +RE+    KLDH ++V   G     D                  ++ +E+ D G L+Q++
Sbjct: 52  EREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI 111

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
                  + + G        L    A+ +  Q+  G+++I  K+LI++D+   N  +   
Sbjct: 112 -------EKRRG------EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDT 158

Query: 143 LSVKISLSGLSK 154
             VKI   GL  
Sbjct: 159 KQVKIGDFGLVT 170

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 61.5 bits (150), Expect = 5e-12
 Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 18/135 (13%)

Query: 27  VHSKDDEALHEFKREIDLFCKLDHAHVVKMIG--ICRDGDPHYLLLEYTDWGDLKQFLLA 84
             S  +        E++L  +L H ++V+     I R     Y+++EY + GDL   +  
Sbjct: 41  YGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITK 100

Query: 85  TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL-----IHKDIAARNCLI 139
             K+            + L     + +  Q+ L L+    +       +H+D+   N  +
Sbjct: 101 GTKER-----------QYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149

Query: 140 SSDLSVKISLSGLSK 154
               +VK+   GL++
Sbjct: 150 DGKQNVKLGDFGLAR 164

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 62.1 bits (151), Expect = 6e-12
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 19/128 (14%)

Query: 29  SKDDEALHEFKREIDLFCKLDH--AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR 86
             D++ L  ++ EI    KL      ++++          Y+++E  +  DL  +L    
Sbjct: 92  EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-IDLNSWL---- 146

Query: 87  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
              K K        +S+   +  +    +   +  I    ++H D+   N LI     +K
Sbjct: 147 ---KKK--------KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLK 194

Query: 147 ISLSGLSK 154
           +   G++ 
Sbjct: 195 LIDFGIAN 202

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 61.6 bits (150), Expect = 6e-12
 Identities = 22/128 (17%), Positives = 48/128 (37%), Gaps = 19/128 (14%)

Query: 29  SKDDEALHEFKREIDLFCKLDH--AHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR 86
             D++ L  ++ EI    KL      ++++          Y+++E  +  DL  +L    
Sbjct: 64  EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGN-IDLNSWL---- 118

Query: 87  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
              K K        +S+   +  +    +   +  I    ++H D+   N LI     +K
Sbjct: 119 ---KKK--------KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDG-MLK 166

Query: 147 ISLSGLSK 154
           +   G++ 
Sbjct: 167 LIDFGIAN 174

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 61.0 bits (149), Expect = 9e-12
 Identities = 27/132 (20%), Positives = 64/132 (48%), Gaps = 16/132 (12%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + K  ++          + E+ + C+L H  ++++     D +  YL+LE    G++ ++
Sbjct: 44  IDKKAMYKAGMV--QRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRY 101

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L              K RV+  S ++A    +Q+  G+ ++    ++H+D+   N L++ 
Sbjct: 102 L--------------KNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTR 147

Query: 142 DLSVKISLSGLS 153
           ++++KI+  GL+
Sbjct: 148 NMNIKIADFGLA 159

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 61.0 bits (148), Expect = 1e-11
 Identities = 29/140 (20%), Positives = 54/140 (38%), Gaps = 32/140 (22%)

Query: 31  DDEALHEFKREIDLF--CKLDHAHVVKMIGICR----DGDPHYLL-LEYTDWGDLKQFLL 83
                  F  E +++    ++H ++ + I        DG   YLL +EY   G L ++L 
Sbjct: 45  SFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYL- 103

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI---------SDKRLIHKDIAA 134
                           + +     +  +A+ V  GL ++             + H+D+ +
Sbjct: 104 ---------------SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNS 148

Query: 135 RNCLISSDLSVKISLSGLSK 154
           RN L+ +D +  IS  GLS 
Sbjct: 149 RNVLVKNDGTCVISDFGLSM 168

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 60.7 bits (148), Expect = 2e-11
 Identities = 27/114 (23%), Positives = 54/114 (47%), Gaps = 10/114 (8%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L H ++V++  +    +   L+ E+ D  DLK+++          S +    
Sbjct: 52  REISLMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYM---------DSRTVGNT 101

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
            R L  +      +Q+  GL    + +++H+D+  +N LI+    +K+   GL+
Sbjct: 102 PRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 59.3 bits (144), Expect = 4e-11
 Identities = 27/152 (17%), Positives = 47/152 (30%), Gaps = 14/152 (9%)

Query: 17  DTSVLMA--KSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT 73
               + A  +S              RE+     L  H+HVV+      + D   +  EY 
Sbjct: 34  LDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYC 93

Query: 74  DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIA 133
           + G L   +    +                  ++   +  QV  GL +I    L+H DI 
Sbjct: 94  NGGSLADAISENYRIM-----------SYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIK 142

Query: 134 ARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
             N  IS       +     +D +      ++
Sbjct: 143 PSNIFISRTSIPNAASEEGDEDDWASNKVMFK 174

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 59.2 bits (144), Expect = 4e-11
 Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 15/119 (12%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
           S D       +RE     +L   HVV +          Y+ +   +  DL   L      
Sbjct: 72  SSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLR----- 126

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                     R   L+  +AV +  Q+   L+        H+D+   N L+S+D    +
Sbjct: 127 ----------RQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYL 175

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 58.4 bits (142), Expect = 7e-11
 Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 17/133 (12%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + K+ +     E  H+ +RE+++   L H +++++ G   D    YL+LEY   G + + 
Sbjct: 42  LFKAQLEKAGVE--HQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRE 99

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L    K                   +  T   ++A  L +   KR+IH+DI   N L+ S
Sbjct: 100 LQKLSK---------------FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS 144

Query: 142 DLSVKISLSGLSK 154
              +KI+  G S 
Sbjct: 145 AGELKIADFGWSV 157

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 58.1 bits (141), Expect = 1e-10
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 17/132 (12%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + KSL+         +   EI +   L H HVV   G   D D  +++LE      L + 
Sbjct: 74  VPKSLLLKPHQR--EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL 131

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
               +                L+  +A     Q+ LG +++   R+IH+D+   N  ++ 
Sbjct: 132 HKRRKA---------------LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 176

Query: 142 DLSVKISLSGLS 153
           DL VKI   GL+
Sbjct: 177 DLEVKIGDFGLA 188

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 57.9 bits (141), Expect = 1e-10
 Identities = 29/108 (26%), Positives = 58/108 (53%), Gaps = 14/108 (12%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L+H ++VK++ +    +  YL+ E+    DLK+F+     D+   +G   P 
Sbjct: 51  REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFM-----DASALTGIPLPL 104

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
           ++S          +Q+  GL      R++H+D+  +N LI+++ ++K+
Sbjct: 105 IKSYL--------FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKL 144

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 21/140 (15%)

Query: 33  EALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKD 91
           E      RE+ L  + D H +V++     +D    Y+ +E      L++++         
Sbjct: 59  ECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQ------- 110

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKIS 148
                  +  +    + +T+  Q   GL H+    ++H+D+   N LIS       +K  
Sbjct: 111 -------KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAM 163

Query: 149 LS--GLSKDTYQKEYYKYRW 166
           +S  GL K      +   R 
Sbjct: 164 ISDFGLCKKLAVGRHSFSRR 183

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 57.6 bits (140), Expect = 2e-10
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 19/123 (15%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKM--IGI--CRDGDPHYLLLEYTDWGDLKQFLLA 84
           ++D      F+RE      L+H  +V +   G      G   Y+++EY D   L+  +  
Sbjct: 50  ARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT 109

Query: 85  TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
                             ++  +A+ +       L       +IH+D+   N +IS+  +
Sbjct: 110 EGP---------------MTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154

Query: 145 VKI 147
           VK+
Sbjct: 155 VKV 157

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 33/132 (25%), Positives = 54/132 (40%), Gaps = 17/132 (12%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + KSL+         +   EI +   L H HVV   G   D D  +++LE      L + 
Sbjct: 48  VPKSLLLKPHQR--EKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLEL 105

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
               +                L+  +A     Q+ LG +++   R+IH+D+   N  ++ 
Sbjct: 106 HKRRKA---------------LTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNE 150

Query: 142 DLSVKISLSGLS 153
           DL VKI   GL+
Sbjct: 151 DLEVKIGDFGLA 162

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 27/139 (19%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH-------------YLLLEYTDW 75
              +E L     E+ L   L+H +VV+      +                 ++ +EY + 
Sbjct: 40  RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCEN 99

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G L   +                   +    +   +  Q+   L +I  + +IH+D+   
Sbjct: 100 GTLYDLI--------------HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPM 145

Query: 136 NCLISSDLSVKISLSGLSK 154
           N  I    +VKI   GL+K
Sbjct: 146 NIFIDESRNVKIGDFGLAK 164

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 24/137 (17%), Positives = 51/137 (37%), Gaps = 18/137 (13%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQF 81
           K   +      +    RE ++  KL+H ++VK+  I  +       L++E+   G L   
Sbjct: 40  KVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV 99

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L                    L  S+ + +   V  G+ H+ +  ++H++I   N +   
Sbjct: 100 LEE------------PSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147

Query: 142 ----DLSVKISLSGLSK 154
                   K++  G ++
Sbjct: 148 GEDGQSVYKLTDFGAAR 164

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 17/133 (12%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + KS +  +  E  H+ +REI++   L H ++++M     D    YL+LE+   G+L + 
Sbjct: 47  LFKSQLEKEGVE--HQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKE 104

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L    +                   ++ T   ++A  L +  ++++IH+DI   N L+  
Sbjct: 105 LQKHGR---------------FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGY 149

Query: 142 DLSVKISLSGLSK 154
              +KI+  G S 
Sbjct: 150 KGELKIADFGWSV 162

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 57.5 bits (139), Expect = 2e-10
 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 22/131 (16%)

Query: 27  VHSKDDEALHEFKREIDLFCKL-DHAHVVKMIG-------ICRDGDPHYLLLEYTDWGDL 78
           + S ++E      +E+    KL  H ++V+              G   +LLL     G L
Sbjct: 61  LLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQL 120

Query: 79  KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARN 136
            +FL                    LS    + + YQ    ++H+  ++  +IH+D+   N
Sbjct: 121 VEFLKKMESRGP------------LSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVEN 168

Query: 137 CLISSDLSVKI 147
            L+S+  ++K+
Sbjct: 169 LLLSNQGTIKL 179

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 15/108 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI +  +L H ++V ++ + R     +L+ EY D   +   L        D+   G   
Sbjct: 51  REIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH-TVLHEL--------DRYQRG--- 98

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
              +      ++ +Q    +        IH+D+   N LI+    +K+
Sbjct: 99  ---VPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKL 143

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 57.2 bits (138), Expect = 3e-10
 Identities = 24/137 (17%), Positives = 51/137 (37%), Gaps = 18/137 (13%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQF 81
           K   +      +    RE ++  KL+H ++VK+  I  +       L++E+   G L   
Sbjct: 40  KVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTV 99

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L                    L  S+ + +   V  G+ H+ +  ++H++I   N +   
Sbjct: 100 LEE------------PSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147

Query: 142 ----DLSVKISLSGLSK 154
                   K++  G ++
Sbjct: 148 GEDGQSVYKLTDFGAAR 164

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 56.2 bits (136), Expect = 5e-10
 Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 16/132 (12%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
           +S+   +  +       E+    K+  H   V++     +G   YL  E      L+Q  
Sbjct: 89  RSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCG-PSLQQHC 147

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
            A                 SL  +Q         L L H+  + L+H D+   N  +   
Sbjct: 148 EAWGA--------------SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPR 193

Query: 143 LSVKISLSGLSK 154
              K+   GL  
Sbjct: 194 GRCKLGDFGLLV 205

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 56.3 bits (136), Expect = 5e-10
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 16/117 (13%)

Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKP 98
             E+     L    +V + G  R+G    + +E  + G L Q +                
Sbjct: 98  VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC----------- 146

Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGLSK 154
               L   +A+    Q   GLE++  +R++H D+ A N L+SSD     +   G + 
Sbjct: 147 ----LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 199

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 56.0 bits (136), Expect = 5e-10
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 15/108 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L H ++V +I +        L+ E+ +  DLK+ L        D++ +G   
Sbjct: 68  REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVL--------DENKTG--- 115

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
              L  SQ     YQ+  G+ H    R++H+D+  +N LI+SD ++K+
Sbjct: 116 ---LQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKL 160

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 55.8 bits (135), Expect = 7e-10
 Identities = 34/152 (22%), Positives = 73/152 (48%), Gaps = 18/152 (11%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           KA + ++T  L A  ++ +K +E L ++  EI++    DH ++VK++G        ++++
Sbjct: 37  KAKN-KETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           E+   G +   +L   +               L+  Q   +  Q+   L  +  KR+IH+
Sbjct: 96  EFCPGGAVDAIMLELDR--------------GLTEPQIQVVCRQMLEALNFLHSKRIIHR 141

Query: 131 DIAARNCLISSDLSVKIS---LSGLSKDTYQK 159
           D+ A N L++ +  ++++   +S  +  T QK
Sbjct: 142 DLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK 173

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 55.7 bits (135), Expect = 8e-10
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 15/108 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L H ++V ++ +C+     YL+ E+ D   +   L        +   +G   
Sbjct: 73  REIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH-TILDDL--------ELFPNG--- 120

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
              L         +Q+  G+       +IH+DI   N L+S    VK+
Sbjct: 121 ---LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKL 165

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 55.9 bits (135), Expect = 9e-10
 Identities = 32/135 (23%), Positives = 60/135 (44%), Gaps = 20/135 (14%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
           +K  V  K D+      RE+ L  +LDH +++K+     D    YL+ E    G+L   +
Sbjct: 60  SKRQVKQKTDK--ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI 117

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS- 141
           ++ ++                S   A  +  QV  G+ ++   +++H+D+   N L+ S 
Sbjct: 118 ISRKR---------------FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK 162

Query: 142 --DLSVKISLSGLSK 154
             D +++I   GLS 
Sbjct: 163 SKDANIRIIDFGLST 177

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 55.3 bits (134), Expect = 1e-09
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 12/119 (10%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           +F +EI +  K  H ++V+++G   DGD   L+  Y   G L   L              
Sbjct: 76  QFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS------------C 123

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD 155
                 LS      +A   A G+  + +   IH+DI + N L+    + KIS  GL++ 
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARA 182

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 55.6 bits (134), Expect = 1e-09
 Identities = 26/136 (19%), Positives = 53/136 (38%), Gaps = 23/136 (16%)

Query: 33  EALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKD 91
           +       EI L  + D H +V++           Y+ LE  +  +L+  +         
Sbjct: 50  DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVE-------- 100

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---------- 141
                   ++       +++  Q+A G+ H+   ++IH+D+  +N L+S+          
Sbjct: 101 SKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQT 160

Query: 142 ---DLSVKISLSGLSK 154
              +L + IS  GL K
Sbjct: 161 GAENLRILISDFGLCK 176

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 30/135 (22%), Positives = 56/135 (41%), Gaps = 21/135 (15%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
            K+ V +  +  L     E+ +   LDH +++K+     D   +YL++E    G+L   +
Sbjct: 71  RKTSVSTSSNSKL---LEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEI 127

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS- 141
           +   K                +   A  +  QV  G+ ++    ++H+D+   N L+ S 
Sbjct: 128 IHRMK---------------FNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK 172

Query: 142 --DLSVKISLSGLSK 154
             D  +KI   GLS 
Sbjct: 173 EKDALIKIVDFGLSA 187

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 15/108 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           RE+ L   L HA++V +  I        L+ EY D  DLKQ+L        D  G+    
Sbjct: 49  REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYL--------DDCGNI--- 96

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
              ++        +Q+  GL +   ++++H+D+  +N LI+    +K+
Sbjct: 97  ---INMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKL 141

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 55.2 bits (133), Expect = 1e-09
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 27/166 (16%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           M K+ +   + + +   K E+ L  KL H ++ ++  +  D     L++E    G L   
Sbjct: 59  MNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDK 118

Query: 82  LLATRKDSKDKSGSGKPRVR-------------------------SLSTSQAVTMAYQVA 116
           L     DS  K      + +                                  +  Q+ 
Sbjct: 119 LNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIF 178

Query: 117 LGLEHISDKRLIHKDIAARNCLISSDLSVKISLS--GLSKDTYQKE 160
             L ++ ++ + H+DI   N L S++ S +I L   GLSK+ Y+  
Sbjct: 179 SALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLN 224

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 19/129 (14%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
           +++ +     + EI++  KL+H  ++K+       D +Y++LE  + G+L   ++  ++ 
Sbjct: 178 AREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR- 235

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSV 145
                         L  +      YQ+ L ++++ +  +IH+D+   N L+SS   D  +
Sbjct: 236 --------------LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 281

Query: 146 KISLSGLSK 154
           KI+  G SK
Sbjct: 282 KITDFGHSK 290

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 15/108 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L H ++V++  +        L+ E+ D  DLK++         D        
Sbjct: 50  REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ-DLKKYF--------DSCNGD--- 97

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
              L      +  +Q+  GL     + ++H+D+  +N LI+ +  +K+
Sbjct: 98  ---LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKL 142

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 54.8 bits (133), Expect = 2e-09
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 15/108 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI +  +L H+++VK+  +        L+ E+ D  DLK+ L        D    G   
Sbjct: 49  REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLL--------DVCEGG--- 96

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
              L +  A +   Q+  G+ +  D+R++H+D+  +N LI+ +  +KI
Sbjct: 97  ---LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKI 141

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 23/116 (19%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH--------YLLLEYTDWGDLKQFLLATRKDSKD 91
           REI +   L H +VV +I ICR             YL+ ++ +  DL   L      +  
Sbjct: 65  REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLL-----SNVL 118

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                       + S+   +   +  GL +I   +++H+D+ A N LI+ D  +K+
Sbjct: 119 VK---------FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKL 165

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 54.2 bits (131), Expect = 3e-09
 Identities = 23/107 (21%), Positives = 50/107 (46%), Gaps = 16/107 (14%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           RE+ L  +L H +++++  +       +L+ EY +  DLK+++        DK+      
Sbjct: 82  REVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYM--------DKNP----- 127

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
              +S     +  YQ+  G+     +R +H+D+  +N L+S   + +
Sbjct: 128 --DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASE 172

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 54.0 bits (130), Expect = 4e-09
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 13/114 (11%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
           REI L  +L H +V+ +  +         +LL +Y +  DL   +          S + K
Sbjct: 67  REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHII-----KFHRASKANK 120

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS----VKI 147
             V+ L      ++ YQ+  G+ ++    ++H+D+   N L+  +      VKI
Sbjct: 121 KPVQ-LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI 173

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 53.5 bits (129), Expect = 4e-09
 Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 22/135 (16%)

Query: 27  VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH----YLLLEYTDWGDLKQFL 82
                      FK E ++   L H ++V+                L+ E    G LK +L
Sbjct: 61  DRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYL 120

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLE--HISDKRLIHKDIAARNCLIS 140
                           R + +      +   Q+  GL+  H     +IH+D+   N  I+
Sbjct: 121 K---------------RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT 165

Query: 141 SDL-SVKISLSGLSK 154
               SVKI   GL+ 
Sbjct: 166 GPTGSVKIGDLGLAT 180

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 53.7 bits (129), Expect = 5e-09
 Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 23/129 (17%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH-----YLLLEYTDWGDL 78
           K LVHS D EA      E     ++ H  +V++       D H     Y+++EY     L
Sbjct: 112 KGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL 171

Query: 79  KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
           K+     +                L  ++A+    ++   L ++    L++ D+   N +
Sbjct: 172 KR-SKGQK----------------LPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIM 214

Query: 139 ISSDLSVKI 147
           ++ +  +K+
Sbjct: 215 LTEE-QLKL 222

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 53.4 bits (129), Expect = 5e-09
 Identities = 27/135 (20%), Positives = 60/135 (44%), Gaps = 14/135 (10%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
            K++   +    + + + EI++   LDH +++K+  +  D    Y+++E  + G+L    
Sbjct: 52  IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL--L- 108

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS- 141
                   ++  S + R ++LS      +  Q+   L +   + ++HKD+   N L    
Sbjct: 109 --------ERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT 160

Query: 142 --DLSVKISLSGLSK 154
                +KI   GL++
Sbjct: 161 SPHSPIKIIDFGLAE 175

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 53.0 bits (128), Expect = 6e-09
 Identities = 31/127 (24%), Positives = 57/127 (44%), Gaps = 18/127 (14%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDLKQFLLATR 86
            +    + +  +EI +  KLDH +VVK++ +  D   D  Y++ E  + G +        
Sbjct: 74  IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV--M----- 126

Query: 87  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
               +           LS  QA      +  G+E++  +++IH+DI   N L+  D  +K
Sbjct: 127 ----EVPTLKP-----LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIK 177

Query: 147 ISLSGLS 153
           I+  G+S
Sbjct: 178 IADFGVS 184

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 52.8 bits (127), Expect = 8e-09
 Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 21/135 (15%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
            K+   +KD   +    RE++L  KLDH +++K+  I  D    Y++ E    G+L   +
Sbjct: 56  NKASAKNKDTSTI---LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEI 112

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS- 141
           +  ++                S   A  +  QV  G+ ++    ++H+D+   N L+ S 
Sbjct: 113 IKRKR---------------FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK 157

Query: 142 --DLSVKISLSGLSK 154
             D  +KI   GLS 
Sbjct: 158 EKDCDIKIIDFGLST 172

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 52.6 bits (127), Expect = 9e-09
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 15/108 (13%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPR 99
           REI L  +L H +++ ++          L+ ++ +  DL+  +       KD S      
Sbjct: 61  REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVII-------KDNSL----- 107

Query: 100 VRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
              L+ S           GLE++    ++H+D+   N L+  +  +K+
Sbjct: 108 --VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKL 153

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 16/119 (13%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
           +  +       E+ +     H +VV+M      G+  ++L+E+   G L   +   R   
Sbjct: 81  RKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR--- 137

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                        L+  Q  T+   V   L ++  + +IH+DI + + L++ D  VK+S
Sbjct: 138 -------------LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLS 183

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 16/124 (12%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLE-YTDWGDLKQFLLATRKDS 89
           +D  L +   EI +  +++HA+++K++ I  +     L++E +    DL  F+       
Sbjct: 69  EDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR----- 123

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL 149
                   PR   L    A  +  Q+   + ++  K +IH+DI   N +I+ D ++K+  
Sbjct: 124 -------HPR---LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLID 173

Query: 150 SGLS 153
            G +
Sbjct: 174 FGSA 177

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
           K   ++ E  +EI    +  H ++V         D  +L+++    G +   +       
Sbjct: 52  KCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKG 111

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
           + KSG        L  S   T+  +V  GLE++     IH+D+ A N L+  D SV+I
Sbjct: 112 EHKSGV-------LDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQI 162

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 16/119 (13%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
           +          EI +  +  + ++V  +     GD  ++++EY   G L   +  T    
Sbjct: 56  QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC--- 112

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                        +   Q   +  +    LE +   ++IH+DI + N L+  D SVK++
Sbjct: 113 -------------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 14/116 (12%)

Query: 32  DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKD 91
           +  L E  +EI +  + D  HVVK  G        ++++EY   G +   +    K    
Sbjct: 65  ESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK---- 120

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                     +L+  +  T+      GLE++   R IH+DI A N L++++   K+
Sbjct: 121 ----------TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKL 166

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 50.6 bits (122), Expect = 5e-08
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 22/116 (18%)

Query: 40  REIDLFCKL---DHAHVVKMIGICRDGDPH-----YLLLEYTDWGDLKQFLLATRKDSKD 91
           RE+ L  +L   +H +VV+++ +C            L+ E+ D  DL+ +L     D   
Sbjct: 60  REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYL-----DKAP 113

Query: 92  KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
             G     ++ L          Q   GL+ +    ++H+D+   N L++S  +VK+
Sbjct: 114 PPGLPAETIKDLM--------RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKL 161

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 50.3 bits (121), Expect = 5e-08
 Identities = 31/151 (20%), Positives = 64/151 (42%), Gaps = 32/151 (21%)

Query: 11  KASDPQDTSVLMA-KSLVHSKDDE-----ALHEFKREIDLFCKL---DHAHVVKMIGICR 61
           KA D ++    +A K +     +E      +    RE+ +   L   +H +VV++  +C 
Sbjct: 29  KARDLKNGGRFVALKRVRVQTGEEGMPLSTI----REVAVLRHLETFEHPNVVRLFDVCT 84

Query: 62  DGDPH-----YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVA 116
                      L+ E+ D  DL  +L     D   + G     ++ +         +Q+ 
Sbjct: 85  VSRTDRETKLTLVFEHVDQ-DLTTYL-----DKVPEPGVPTETIKDMM--------FQLL 130

Query: 117 LGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
            GL+ +   R++H+D+  +N L++S   +K+
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKL 161

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 50.8 bits (121), Expect = 5e-08
 Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 21/141 (14%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGI------CRDGDPHYLLLEYTDWGD 77
           K        +    +  EI +  KL+H +VV    +          D   L +EY + GD
Sbjct: 45  KQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGD 104

Query: 78  LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC 137
           L+++L                    L      T+   ++  L ++ + R+IH+D+   N 
Sbjct: 105 LRKYLNQ------------FENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 152

Query: 138 LISS---DLSVKISLSGLSKD 155
           ++      L  KI   G +K+
Sbjct: 153 VLQPGPQRLIHKIIDLGYAKE 173

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 50.1 bits (120), Expect = 6e-08
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 15/123 (12%)

Query: 25  SLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLA 84
           S    + +E   +  +E+    KL H + ++  G        +L++EY   G     L  
Sbjct: 88  SYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSASDLLEV 146

Query: 85  TRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS 144
            +K               L   +   + +    GL ++    +IH+D+ A N L+S    
Sbjct: 147 HKK--------------PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGL 192

Query: 145 VKI 147
           VK+
Sbjct: 193 VKL 195

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 50.3 bits (120), Expect = 6e-08
 Identities = 18/120 (15%), Positives = 44/120 (36%), Gaps = 13/120 (10%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
           +  +E +   + E+ +    +H ++V         +  +++  +  +G  K  +     D
Sbjct: 64  ACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMD 123

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                         ++      +   V   L++I     +H+ + A + LIS D  V +S
Sbjct: 124 G-------------MNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 170

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 50.5 bits (121), Expect = 6e-08
 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 18/130 (13%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
           +   ++   E   EI L   LDH +++K+  +  D    YL+ E+ + G+L + ++   K
Sbjct: 83  NKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK 142

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLS 144
                               A  +  Q+  G+ ++    ++H+DI   N L+ +    L+
Sbjct: 143 ---------------FDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLN 187

Query: 145 VKISLSGLSK 154
           +KI   GLS 
Sbjct: 188 IKIVDFGLSS 197

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 50.0 bits (120), Expect = 6e-08
 Identities = 29/137 (21%), Positives = 58/137 (42%), Gaps = 16/137 (11%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           K  D +   V+  K +   + ++ + + ++EI +  + D  +V K  G        ++++
Sbjct: 40  KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           EY   G     L                    L  +Q  T+  ++  GL+++  ++ IH+
Sbjct: 100 EYLGGGSALDLL----------------EPGPLDETQIATILREILKGLDYLHSEKKIHR 143

Query: 131 DIAARNCLISSDLSVKI 147
           DI A N L+S    VK+
Sbjct: 144 DIKAANVLLSEHGEVKL 160

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 50.0 bits (120), Expect = 7e-08
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 14/136 (10%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
             +   S    +  + KRE  +   L H H+V+++         Y++ E+ D  DL    
Sbjct: 58  DVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADL--C- 114

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS- 141
                    +           S + A     Q+   L +  D  +IH+D+     L++S 
Sbjct: 115 --------FEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK 166

Query: 142 --DLSVKISLSGLSKD 155
                VK+   G++  
Sbjct: 167 ENSAPVKLGGFGVAIQ 182

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 49.9 bits (120), Expect = 8e-08
 Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 21/135 (15%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
            K+   +KD   +    RE++L  KLDH +++K+  I  D    Y++ E    G+L  F 
Sbjct: 56  NKASAKNKDTSTI---LREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL--F- 109

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS- 141
                D   K           S   A  +  QV  G+ ++    ++H+D+   N L+ S 
Sbjct: 110 -----DEIIKRK-------RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK 157

Query: 142 --DLSVKISLSGLSK 154
             D  +KI   GLS 
Sbjct: 158 EKDCDIKIIDFGLST 172

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 49.7 bits (119), Expect = 8e-08
 Identities = 15/120 (12%), Positives = 34/120 (28%), Gaps = 17/120 (14%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
               D+ L E         ++D   V +++ +        ++ E+   G L++ +  T  
Sbjct: 68  GVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQE-VADTS- 125

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                           S   A+     +A   +      +           +S D  V +
Sbjct: 126 ---------------PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVL 170

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 49.4 bits (118), Expect = 1e-07
 Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 17/136 (12%)

Query: 21  LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ 80
             AK ++   + +     ++EI     L H  +V +     D +   ++ E+   G+L +
Sbjct: 185 FAAKFVMTPHESDK-ETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFE 243

Query: 81  FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
            +                    +S  +AV    QV  GL H+ +   +H D+   N + +
Sbjct: 244 KVADEHN--------------KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 289

Query: 141 S--DLSVKISLSGLSK 154
           +     +K+   GL+ 
Sbjct: 290 TKRSNELKLIDFGLTA 305

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 49.5 bits (118), Expect = 1e-07
 Identities = 18/126 (14%), Positives = 41/126 (32%), Gaps = 12/126 (9%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
                 +     +I         + V  +         Y+ ++     +LK ++      
Sbjct: 99  LSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWM------ 152

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                 + +  +        + +  Q+A  +E +  K L+H+D+   N   + D  VK+ 
Sbjct: 153 ------NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG 206

Query: 149 LSGLSK 154
             GL  
Sbjct: 207 DFGLVT 212

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 49.2 bits (118), Expect = 1e-07
 Identities = 28/123 (22%), Positives = 62/123 (50%), Gaps = 15/123 (12%)

Query: 31  DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
           +  +L +  RE+ +   L+H ++VK+  +       YL++EY   G++  +L+A  +   
Sbjct: 54  NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--- 110

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                       +   +A +   Q+   +++   KR++H+D+ A N L+ +D+++KI+  
Sbjct: 111 ------------MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADF 158

Query: 151 GLS 153
           G S
Sbjct: 159 GFS 161

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 48.8 bits (116), Expect = 2e-07
 Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 21/128 (16%)

Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKP 98
            + ++          +K        +   L+ E   +G L   +      +  K+   K 
Sbjct: 115 TQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAI------NLYKNTPEKV 168

Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----------DLSVKI 147
               +     ++ A ++   +E + D  +IH DI   N ++ +              + +
Sbjct: 169 ----MPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224

Query: 148 SLSGLSKD 155
              G S D
Sbjct: 225 IDLGQSID 232

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 25/136 (18%), Positives = 59/136 (43%), Gaps = 21/136 (15%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           +    + ++D + L   +RE  +  KL H ++V++    ++   HYL+ +    G+L + 
Sbjct: 39  INTKKLSARDFQKL---EREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 95

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           ++A                   S + A     Q+   + +     ++H+++   N L++S
Sbjct: 96  IVA---------------REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 140

Query: 142 ---DLSVKISLSGLSK 154
                +VK++  GL+ 
Sbjct: 141 KAKGAAVKLADFGLAI 156

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 48.7 bits (116), Expect = 2e-07
 Identities = 24/132 (18%), Positives = 56/132 (42%), Gaps = 17/132 (12%)

Query: 18  TSVLMAKSLVHSKDDEA-LHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           + ++MA+ L+H +   A  ++  RE+ +  + +  ++V   G         + +E+ D G
Sbjct: 57  SGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAAR 135
            L Q L                +   +       ++  V  GL ++    +++H+D+   
Sbjct: 117 SLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPS 161

Query: 136 NCLISSDLSVKI 147
           N L++S   +K+
Sbjct: 162 NILVNSRGEIKL 173

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           +F+ E+++     H +++++ G C       L+  Y   G +   L    +         
Sbjct: 73  QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP------ 126

Query: 97  KPRVRSLSTSQAVTMAYQVALGLE---HISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
                 L   +   +A   A GL       D ++IH+D+ A N L+  +    +   GL+
Sbjct: 127 -----PLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181

Query: 154 K 154
           K
Sbjct: 182 K 182

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 47.7 bits (114), Expect = 4e-07
 Identities = 29/129 (22%), Positives = 62/129 (48%), Gaps = 19/129 (14%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
           +++ +     + EI++  KL+H  ++K+       D +Y++LE  + G+L   ++  ++ 
Sbjct: 53  AREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKR- 110

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSV 145
                         L  +      YQ+ L ++++ +  +IH+D+   N L+SS   D  +
Sbjct: 111 --------------LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 156

Query: 146 KISLSGLSK 154
           KI+  G SK
Sbjct: 157 KITDFGHSK 165

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 47.3 bits (113), Expect = 5e-07
 Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 16/117 (13%)

Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           K+EI L  +L H +V++++ +  + +    Y+++EY   G  +           D     
Sbjct: 54  KKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML---------DSVPEK 104

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
           +         QA     Q+  GLE++  + ++HKDI   N L+++  ++KIS  G++
Sbjct: 105 R-----FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 46.8 bits (112), Expect = 7e-07
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 23/135 (17%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
            K  V   D      FK+EI++   LDH +++++     D    YL++E    G+L + +
Sbjct: 43  PKYFVEDVDR-----FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERV 97

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS- 141
           +  R                   S A  +   V   + +     + H+D+   N L  + 
Sbjct: 98  VHKRV---------------FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD 142

Query: 142 --DLSVKISLSGLSK 154
             D  +K+   GL+ 
Sbjct: 143 SPDSPLKLIDFGLAA 157

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 47.1 bits (112), Expect = 8e-07
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 21/113 (18%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH-----YLLLEYTDWGDLKQFLLATRKDSKDKSG 94
           REI +  +L+H HVVK++ I    D       Y++LE  D  D K+           ++ 
Sbjct: 101 REIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADS-DFKKLF---------RTP 150

Query: 95  SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                   L+     T+ Y + +G++++    ++H+D+   NCL++ D SVK+
Sbjct: 151 ------VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKV 197

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 25/135 (18%), Positives = 58/135 (42%), Gaps = 21/135 (15%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
               + ++D + L   +RE  +  KL H ++V++    ++   HYL+ +    G+L + +
Sbjct: 63  NTKKLSARDFQKL---EREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI 119

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS- 141
           +A                   S + A     Q+   + +     ++H+++   N L++S 
Sbjct: 120 VA---------------REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASK 164

Query: 142 --DLSVKISLSGLSK 154
               +VK++  GL+ 
Sbjct: 165 AKGAAVKLADFGLAI 179

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 22/136 (16%), Positives = 50/136 (36%), Gaps = 18/136 (13%)

Query: 21  LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ 80
            MAK +     D+     K+EI +     H +++ +       +   ++ E+    D+ +
Sbjct: 33  YMAKFVKVKGTDQ--VLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFE 90

Query: 81  FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
            +                    L+  + V+  +QV   L+ +    + H DI   N +  
Sbjct: 91  RINT--------------SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQ 136

Query: 141 S--DLSVKISLSGLSK 154
           +    ++KI   G ++
Sbjct: 137 TRRSSTIKIIEFGQAR 152

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 20/132 (15%), Positives = 51/132 (38%), Gaps = 16/132 (12%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
            S    +  E      +E+D+  K+  H +++++          +L+ +    G+L  +L
Sbjct: 56  GSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL 115

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
                              +LS  +   +   +   +  +    ++H+D+   N L+  D
Sbjct: 116 TE---------------KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDD 160

Query: 143 LSVKISLSGLSK 154
           +++K++  G S 
Sbjct: 161 MNIKLTDFGFSC 172

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 24/132 (18%), Positives = 57/132 (43%), Gaps = 17/132 (12%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + +  + S D   + + KREI       H H++K+  +       ++++EY   G+L  +
Sbjct: 44  LNRQKIRSLDV--VGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           +    +               +   +A  +  Q+   +++     ++H+D+   N L+ +
Sbjct: 102 ICKHGR---------------VEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA 146

Query: 142 DLSVKISLSGLS 153
            ++ KI+  GLS
Sbjct: 147 HMNAKIADFGLS 158

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 45.6 bits (109), Expect = 2e-06
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 23/136 (16%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + KS             + EI +  K+ H ++V +  I      +YL+++    G+L   
Sbjct: 42  IKKSPAFRDSS-----LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDR 96

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           +L                    +   A  +  QV   ++++ +  ++H+D+   N L  +
Sbjct: 97  ILERGV---------------YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLT 141

Query: 142 ---DLSVKISLSGLSK 154
              +  + I+  GLSK
Sbjct: 142 PEENSKIMITDFGLSK 157

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 45.7 bits (109), Expect = 2e-06
 Identities = 26/135 (19%), Positives = 57/135 (42%), Gaps = 19/135 (14%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           +    S+   +  E +RE+ +  ++ H +V+ +  +  +     L+LE    G+L  F  
Sbjct: 48  RQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL--FDF 105

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-- 141
             +K+             SLS  +A +   Q+  G+ ++  K++ H D+   N ++    
Sbjct: 106 LAQKE-------------SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152

Query: 142 --DLSVKISLSGLSK 154
                +K+   GL+ 
Sbjct: 153 IPIPHIKLIDFGLAH 167

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 21/132 (15%), Positives = 36/132 (27%), Gaps = 11/132 (8%)

Query: 20  VLMAKSLVHSKDDEALHEFK--REIDLFCKLDHAHVVKMIGICRDGD-PHYLLLEYTDWG 76
              A  L+    +EA    +     D           ++     D    +YLLL      
Sbjct: 113 TFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASV 172

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           DL+            +   G   +  L          Q+     ++  K L+H      N
Sbjct: 173 DLELLFSTLDFVYVFRGDEGILALHIL--------TAQLIRLAANLQSKGLVHGHFTPDN 224

Query: 137 CLISSDLSVKIS 148
             I  D  + + 
Sbjct: 225 LFIMPDGRLMLG 236

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 45.9 bits (109), Expect = 2e-06
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 16/120 (13%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
             K EI +  +L H  ++ +     D     L+LE+   G+L   + A            
Sbjct: 94  TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA------------ 141

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS--DLSVKISLSGLSK 154
                 +S ++ +    Q   GL+H+ +  ++H DI   N +  +    SVKI   GL+ 
Sbjct: 142 --EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLAT 199

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 14/133 (10%)

Query: 18  TSVLMAKSLVHSKDDEA-LHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDW 75
           +  +MA   + S  DE    +   ++D+  +  D  ++V+  G        ++ +E    
Sbjct: 46  SGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS- 104

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAA 134
               +F                     +       +       L H+  + ++IH+DI  
Sbjct: 105 TSFDKFYKYV----------YSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKP 154

Query: 135 RNCLISSDLSVKI 147
            N L+    ++K+
Sbjct: 155 SNILLDRSGNIKL 167

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 18/126 (14%), Positives = 40/126 (31%), Gaps = 9/126 (7%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-PHYLLLEYTDWGDLKQFL 82
           + + + K  +    F    DL        ++++    RD        L      +L+ F 
Sbjct: 131 RGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFG 190

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
                   +   S     +SL     + +  QV   L  +    L+H  +   + ++   
Sbjct: 191 --------EVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQR 242

Query: 143 LSVKIS 148
             V ++
Sbjct: 243 GGVFLT 248

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 45.4 bits (108), Expect = 3e-06
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 21/135 (15%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
            K L  + D + +   + EI +  +L H +++K+  I        L+LE    G+L   +
Sbjct: 83  LKVLKKTVDKKIV---RTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRI 139

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS- 141
           +                    S   A     Q+   + ++ +  ++H+D+   N L ++ 
Sbjct: 140 VEKGY---------------YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP 184

Query: 142 --DLSVKISLSGLSK 154
             D  +KI+  GLSK
Sbjct: 185 APDAPLKIADFGLSK 199

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 19/124 (15%), Positives = 49/124 (39%), Gaps = 16/124 (12%)

Query: 32  DEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSK 90
           +E     +RE  +  ++  H H++ +I         +L+ +    G+L  +L        
Sbjct: 140 EEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTE------ 193

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLS 150
                      +LS  +  ++   +   +  +    ++H+D+   N L+  ++ +++S  
Sbjct: 194 ---------KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDF 244

Query: 151 GLSK 154
           G S 
Sbjct: 245 GFSC 248

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 25/135 (18%), Positives = 56/135 (41%), Gaps = 19/135 (14%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           +    S+      E +RE+ +  ++ H +++ +  +  +     L+LE    G+L  F  
Sbjct: 48  RQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGEL--FDF 105

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-- 141
             +K+             SLS  +A +   Q+  G+ ++  K++ H D+   N ++    
Sbjct: 106 LAQKE-------------SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN 152

Query: 142 --DLSVKISLSGLSK 154
                +K+   GL+ 
Sbjct: 153 IPIPHIKLIDFGLAH 167

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 44.6 bits (106), Expect = 4e-06
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 15/133 (11%)

Query: 18  TSVLMAKSLVHSKDDEA-LHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDW 75
           +  +MA   + +  +         ++D+  +  D    V   G        ++ +E  D 
Sbjct: 31  SGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD- 89

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAA 134
             L +F     K   DK  +       +       +A  +   LEH+ S   +IH+D+  
Sbjct: 90  TSLDKFY----KQVIDKGQT-------IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKP 138

Query: 135 RNCLISSDLSVKI 147
            N LI++   VK+
Sbjct: 139 SNVLINALGQVKM 151

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 44.1 bits (105), Expect = 7e-06
 Identities = 26/135 (19%), Positives = 58/135 (42%), Gaps = 19/135 (14%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           + L  S+   +  E +RE+++  ++ H +++ +  I  +     L+LE    G+L  F  
Sbjct: 41  RRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL--FDF 98

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-- 141
              K+             SL+  +A     Q+  G+ ++  KR+ H D+   N ++    
Sbjct: 99  LAEKE-------------SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN 145

Query: 142 --DLSVKISLSGLSK 154
             +  +K+   G++ 
Sbjct: 146 VPNPRIKLIDFGIAH 160

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 43.9 bits (104), Expect = 1e-05
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 22/140 (15%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHA--HVVKMIGICRDGDPHYLLLEYTD-WGDLKQ 80
             +    +         E+ L  K+      V++++      D   L+LE  +   DL  
Sbjct: 79  DRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD 138

Query: 81  FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
           F+                    L    A +  +QV   + H  +  ++H+DI   N LI 
Sbjct: 139 FITERGA---------------LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID 183

Query: 141 SD-LSVKIS---LSGLSKDT 156
            +   +K+       L KDT
Sbjct: 184 LNRGELKLIDFGSGALLKDT 203

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 43.5 bits (103), Expect = 1e-05
 Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 23/139 (16%)

Query: 31  DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHY------LLLEYTDWGDLKQFLL 83
             +   E K+EI++  K   H ++    G     +P        L++E+   G +   + 
Sbjct: 60  TGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIK 119

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
            T+               +L       +  ++  GL H+   ++IH+DI  +N L++ + 
Sbjct: 120 NTKG-------------NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA 166

Query: 144 SVKIS---LSGLSKDTYQK 159
            VK+    +S     T  +
Sbjct: 167 EVKLVDFGVSAQLDRTVGR 185

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 43.4 bits (103), Expect = 1e-05
 Identities = 24/135 (17%), Positives = 54/135 (40%), Gaps = 19/135 (14%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           +    S+   +  + +RE+ +  ++ H +V+ +  +  +     L+LE    G+L  F  
Sbjct: 47  RRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL--FDF 104

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-- 141
              K+             SL+  +A     Q+  G+ ++   ++ H D+   N ++    
Sbjct: 105 LAEKE-------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN 151

Query: 142 --DLSVKISLSGLSK 154
                +KI   GL+ 
Sbjct: 152 VPKPRIKIIDFGLAH 166

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 23/133 (17%), Positives = 42/133 (31%), Gaps = 12/133 (9%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH----YLLLEYTDW 75
           VL  + L   K+ +      R I  F  +      KMI +  D           L     
Sbjct: 129 VLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ 188

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
            +L+ F         +   S     +SL     + +  QV   L  +    L+H  +   
Sbjct: 189 SNLQTFG--------EVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPV 240

Query: 136 NCLISSDLSVKIS 148
           + ++     V ++
Sbjct: 241 DIVLDQRGGVFLT 253

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 16/120 (13%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSG 96
           E K EI +  +LDHA+++++       +   L++EY D G+L  F     +         
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL--FDRIIDESY------- 182

Query: 97  KPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS--DLSVKISLSGLSK 154
                +L+    +    Q+  G+ H+    ++H D+   N L  +     +KI   GL++
Sbjct: 183 -----NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 24/115 (20%), Positives = 53/115 (46%), Gaps = 16/115 (13%)

Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKP 98
           +REI     L H H++K+  +        +++EY   G+L  +++  ++           
Sbjct: 57  EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAG-GELFDYIVEKKR----------- 104

Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
               ++  +      Q+   +E+    +++H+D+   N L+  +L+VKI+  GLS
Sbjct: 105 ----MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLS 155

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 24/132 (18%), Positives = 58/132 (43%), Gaps = 17/132 (12%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + +  + S D   + + +REI       H H++K+  +       ++++EY   G+L  +
Sbjct: 49  LNRQKIRSLDV--VGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDY 106

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           +    +               L   ++  +  Q+  G+++     ++H+D+   N L+ +
Sbjct: 107 ICKNGR---------------LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA 151

Query: 142 DLSVKISLSGLS 153
            ++ KI+  GLS
Sbjct: 152 HMNAKIADFGLS 163

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 42.7 bits (101), Expect = 3e-05
 Identities = 25/134 (18%), Positives = 56/134 (41%), Gaps = 21/134 (15%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
              + ++D + L   +RE  +   L H ++V++     +   HYL+ +    G+L + ++
Sbjct: 46  TKKLSARDHQKL---EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIV 102

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-- 141
           A                   S + A     Q+   + H     ++H+++   N L++S  
Sbjct: 103 AREY---------------YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL 147

Query: 142 -DLSVKISLSGLSK 154
              +VK++  GL+ 
Sbjct: 148 KGAAVKLADFGLAI 161

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 17/133 (12%), Positives = 41/133 (30%), Gaps = 18/133 (13%)

Query: 18  TSVLMAKSLVHSKDDEA-LHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDW 75
           T  ++A   +    ++        ++D+  K  D  ++V+  G        ++ +E    
Sbjct: 49  TGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGT 108

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIHKDIAA 134
              K                       +       M   +   L ++     +IH+D+  
Sbjct: 109 CAEKLKKR---------------MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKP 153

Query: 135 RNCLISSDLSVKI 147
            N L+     +K+
Sbjct: 154 SNILLDERGQIKL 166

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 42.0 bits (99), Expect = 4e-05
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 21/113 (18%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH-----YLLLEYTDWGDLKQFLLATRKDSKDKSG 94
           REI +  +L   +++++  +    D       Y++LE  D  DLK+           K+ 
Sbjct: 74  REITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-DLKKLF---------KTP 123

Query: 95  SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                   L+     T+ Y + LG   I +  +IH+D+   NCL++ D SVK+
Sbjct: 124 ------IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKV 170

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 41.2 bits (97), Expect = 7e-05
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 20/126 (15%)

Query: 37  EFK-REIDLFCKLDHAHVVKMIGICRDGDPH------YLLLEYTDWGDLKQFLLATRKDS 89
            FK RE+ +   + H +VV +                 L+LEY     + +     R  +
Sbjct: 77  RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP-ETVYRAS---RHYA 132

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKIS 148
           K K       ++           YQ+   L +I    + H+DI  +N L+      +K+ 
Sbjct: 133 KLKQTMPMLLIKLYM--------YQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLI 184

Query: 149 LSGLSK 154
             G +K
Sbjct: 185 DFGSAK 190

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 41.1 bits (97), Expect = 8e-05
 Identities = 23/142 (16%), Positives = 43/142 (30%), Gaps = 24/142 (16%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLD----HAHVVKMIGICRDGDPHYLLLEYTDWG-DL 78
             ++             E+ L  K+     H  V++++      +   L+LE      DL
Sbjct: 67  NRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDL 126

Query: 79  KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL 138
             ++                    L    +     QV   ++H   + ++H+DI   N L
Sbjct: 127 FDYITEKGP---------------LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENIL 171

Query: 139 ISSD-LSVKIS---LSGLSKDT 156
           I       K+       L  D 
Sbjct: 172 IDLRRGCAKLIDFGSGALLHDE 193

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 15/125 (12%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
            +  +     K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +      
Sbjct: 43  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG- 101

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                         +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS
Sbjct: 102 --------------MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147

Query: 149 LSGLS 153
             GL+
Sbjct: 148 DFGLA 152

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 40.3 bits (95), Expect = 1e-04
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 24/137 (17%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ 80
           + K   H +         RE+++  +   H +V+++I    + D  YL+ E    G +  
Sbjct: 46  IEKQPGHIRSR-----VFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS 100

Query: 81  FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
            +                  R  +  +A  +   VA  L+ + +K + H+D+   N L  
Sbjct: 101 HIHK---------------RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145

Query: 141 S---DLSVKISLSGLSK 154
                  VKI    L  
Sbjct: 146 HPNQVSPVKICDFDLGS 162

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 22/128 (17%), Positives = 53/128 (41%), Gaps = 19/128 (14%)

Query: 31  DDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDS 89
                   ++EI      + H ++VK+  +  D    +L++E  + G+L + +       
Sbjct: 45  SKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK----- 99

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVK 146
                      +  S ++A  +  ++   + H+ D  ++H+D+   N L +    +L +K
Sbjct: 100 ----------KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIK 149

Query: 147 ISLSGLSK 154
           I   G ++
Sbjct: 150 IIDFGFAR 157

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 23/137 (16%), Positives = 50/137 (36%), Gaps = 20/137 (14%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHA-HVVKMIGICRDGDPHYLLLEYTDWGDLKQ 80
           + K          +     EI +         V+ +  +  +     L+LEY   G++  
Sbjct: 62  LKKRRRGQDCRAEI---LHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFS 118

Query: 81  FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS 140
             L    +              +S +  + +  Q+  G+ ++    ++H D+  +N L+S
Sbjct: 119 LCLPELAE-------------MVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165

Query: 141 S---DLSVKISLSGLSK 154
           S      +KI   G+S+
Sbjct: 166 SIYPLGDIKIVDFGMSR 182

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 24/143 (16%)

Query: 37  EFK-REIDLFCKLDHAHVVKMIGICRDGDPH------YLLLEYTDWGDLKQFLLATRKDS 89
            FK RE+ +  KLDH ++V++                 L+L+Y     + +     R  S
Sbjct: 92  RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-ETVYRVA---RHYS 147

Query: 90  KDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SVKIS 148
           + K       V+           YQ+   L +I    + H+DI  +N L+  D   +K+ 
Sbjct: 148 RAKQTLPVIYVKLYM--------YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC 199

Query: 149 LSGLSKDTYQKEYYK-YRWVICS 170
             G +K   + E    Y   ICS
Sbjct: 200 DFGSAKQLVRGEPNVSY---ICS 219

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
            +  +     K+EI +   L+H +VVK  G  R+G+  YL LEY   G+L   +      
Sbjct: 43  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG- 101

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                         +    A    +Q+  G+ ++    + H+DI   N L+    ++KIS
Sbjct: 102 --------------MPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147

Query: 149 LSGLSK 154
             GL+ 
Sbjct: 148 DFGLAT 153

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 15/134 (11%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           + K  +  +  EA+   +++I    K++   VV +       D   L+L   + GDLK  
Sbjct: 217 LEKKRIKKRKGEAMALNEKQI--LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFH 274

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           +    +                  ++AV  A ++  GLE +  +R++++D+   N L+  
Sbjct: 275 IYHMGQ-------------AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD 321

Query: 142 DLSVKISLSGLSKD 155
              ++IS  GL+  
Sbjct: 322 HGHIRISDLGLAVH 335

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 39.6 bits (93), Expect = 3e-04
 Identities = 21/121 (17%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 39  KREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGK 97
             EI++  +   H +++ +  +  DG   Y++ E    G+L   +L              
Sbjct: 63  TEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILR------------- 109

Query: 98  PRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD----LSVKISLSGLS 153
              +  S  +A  + + +   +E++  + ++H+D+   N L   +     S++I   G +
Sbjct: 110 --QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA 167

Query: 154 K 154
           K
Sbjct: 168 K 168

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 39.2 bits (92), Expect = 3e-04
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 25/135 (18%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH------YLLLEYTDWGDLKQFLLATRKDSKDKS 93
           RE+ L   + H +V+ ++ +             YL+       DL   +           
Sbjct: 77  RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG-ADLNNIV----------- 124

Query: 94  GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL- 152
                + + L+      + YQ+  GL++I    +IH+D+   N  ++ D  +KI   GL 
Sbjct: 125 -----KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 179

Query: 153 -SKDTYQKEYYKYRW 166
                    Y   RW
Sbjct: 180 RHTADEMTGYVATRW 194

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 39.4 bits (92), Expect = 4e-04
 Identities = 23/132 (17%), Positives = 52/132 (39%), Gaps = 13/132 (9%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K  +  +        +++I    K+    +V +           L++   + GD++  + 
Sbjct: 220 KKRLKKRKGYQGAMVEKKI--LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIY 277

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
              +                   +A+    Q+  GLEH+  + +I++D+   N L+  D 
Sbjct: 278 NVDE-----------DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG 326

Query: 144 SVKISLSGLSKD 155
           +V+IS  GL+ +
Sbjct: 327 NVRISDLGLAVE 338

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 39.1 bits (92), Expect = 4e-04
 Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 15/131 (11%)

Query: 39  KREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKP 98
            RE D+  +LDH   VK+    +D +  Y  L Y   G+L    +               
Sbjct: 78  TRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIR-------------- 122

Query: 99  RVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ 158
           ++ S   +       ++   LE++  K +IH+D+   N L++ D+ ++I+  G +K    
Sbjct: 123 KIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 182

Query: 159 KEYYKYRWVIC 169
           +          
Sbjct: 183 ESKQARANSFV 193

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 24/136 (17%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH-----YLLLEYTDWGDLKQFLLATRKDSKDKSG 94
           REI L     H +++ +  I    +       YL+ E     DL Q +            
Sbjct: 78  REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVI------------ 124

Query: 95  SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL-- 152
               +   +S        Y + LGL  + +  ++H+D+   N L++ +  + I    L  
Sbjct: 125 --HDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR 182

Query: 153 --SKDTYQKEYYKYRW 166
             + D  +  Y  +RW
Sbjct: 183 EDTADANKTHYVTHRW 198

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 25/135 (18%)

Query: 40  REIDLFCKLDHAHVVKMIGICRDGDPH------YLLLEYTDWGDLKQFLLATRKDSKDKS 93
           RE+ L   + H +V+ ++ +    +        YL++ +    DL + +           
Sbjct: 73  RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMG-TDLGKLM----------- 120

Query: 94  GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS 153
                +   L   +   + YQ+  GL +I    +IH+D+   N  ++ D  +KI   GL+
Sbjct: 121 -----KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175

Query: 154 K--DTYQKEYYKYRW 166
           +  D+    Y   RW
Sbjct: 176 RQADSEMTGYVVTRW 190

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 37.9 bits (87), Expect = 9e-04
 Identities = 24/173 (13%), Positives = 47/173 (27%), Gaps = 29/173 (16%)

Query: 11  KASDPQDTSV-----LMAKSLVHSKDDEALHEFKREIDLFCKL---------DHAHVVKM 56
           +              +    LV+    +   E   EI +  +L              + +
Sbjct: 38  QTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97

Query: 57  IG--ICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDK------------SGSGKPRVRS 102
                 +   P  LL  +  +   K          KD                 + R + 
Sbjct: 98  NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKL 157

Query: 103 LSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSK 154
            S + A ++ +Q+   L       R  H+D+   N L+      K+  +   K
Sbjct: 158 SSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGK 210

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	183
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.98
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.98
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.98
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.98
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.98
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.98
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.98
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.97
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.97
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.97
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.97
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.97
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.97
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.97
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.97
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.97
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.97
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.97
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.97
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.97
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.97
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.97
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.97
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.97
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.97
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.97
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.97
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.97
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.97
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.97
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.97
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.97
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.97
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.97
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.97
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.97
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.97
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.97
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.97
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.97
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.97
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.97
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.97
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.97
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.97
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.97
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.96
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.96
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.96
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.96
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.96
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.96
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.96
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.96
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.96
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.96
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.96
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.96
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.96
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.96
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.96
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.96
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.96
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.96
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.96
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.96
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.96
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.96
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.96
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.96
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.96
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.96
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.96
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.96
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.96
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.96
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.96
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.96
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.96
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.96
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.96
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.96
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.96
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.96
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.96
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.96
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.96
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.96
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.96
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.95
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.95
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.95
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.95
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.95
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.95
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.95
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.95
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.95
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.95
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.95
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.95
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.95
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.95
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.95
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.95
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.95
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.95
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.95
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.95
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.95
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.95
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.94
3uqc_A	286	Probable conserved transmembrane protein; structur	99.94
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.94
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.94
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.93
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.93
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.91
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.89
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.81
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.65
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.4
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.22
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.19
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.92
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.79
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.65
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.62
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.16
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.98
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.94
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.9
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.89
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.44
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.22
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.08
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	96.99
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	96.98
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	96.27
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	96.17
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	95.21
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	93.4
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	93.3
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	92.71
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	92.34
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	91.73
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	90.68
4ano_A	219	ESSB; membrane protein, membrane secretion, ESS ty	88.36
3mes_A	424	Choline kinase; malaria, structural genomics, stru	88.09
4ann_A	215	ESSB; membrane protein, membrane secretion, ESS ty	86.99
2x6h_A	696	GH13170P, VPS34, phosphotidylinositol 3 kinase 59F	84.51
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	82.93

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4.5e-43  Score=264.11  Aligned_cols=166  Identities=18%  Similarity=0.348  Sum_probs=144.8

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      +|--++|.||+|.+..+++.||+|++... ......+.+.+|+++++.++||||+++++++++++.+|+|||||+||+|.
T Consensus        32 lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~  111 (350)
T 4b9d_A           32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLF  111 (350)
T ss_dssp             C------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence            35667899999999999999999999743 35566778999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....             ..+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+.....
T Consensus       112 ~~i~~~~~-------------~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~  178 (350)
T 4b9d_A          112 KRINAQKG-------------VLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST  178 (350)
T ss_dssp             HHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred             HHHHHcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence            99976532             24789999999999999999999999999999999999999999999999999976543


Q ss_pred             -----cccceeeeeecccCCCcccc
Q psy2674         160 -----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~~~~  179 (183)
                           ..+||++|+|||++.|++||
T Consensus       179 ~~~~~~~~GT~~YmAPE~l~~~~y~  203 (350)
T 4b9d_A          179 VELARACIGTPYYLSPEICENKPYN  203 (350)
T ss_dssp             HHHHHHHHSCCTTCCHHHHTTCCCC
T ss_pred             cccccccCCCccccCHHHHCCCCCC
Confidence                 45789999999999998885

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4.6e-43  Score=260.23  Aligned_cols=163  Identities=18%  Similarity=0.264  Sum_probs=145.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--++|+||+|.+..+++.||+|++.+..  +....+.+.+|+++++.++||||+++++++++++.+|++|||++||+|.
T Consensus        41 G~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~  120 (311)
T 4aw0_A           41 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL  120 (311)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred             ecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHH
Confidence            45578999999999999999999987331  1223457899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++...+               .+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+|+.... 
T Consensus       121 ~~i~~~~---------------~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~  185 (311)
T 4aw0_A          121 KYIRKIG---------------SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  185 (311)
T ss_dssp             HHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence            9998764               499999999999999999999999999999999999999999999999999985432 


Q ss_pred             ------ccccceeeeeecccCCCcccc
Q psy2674         159 ------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                            ...+||++|+|||++.+++|+
T Consensus       186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~  212 (311)
T 4aw0_A          186 SKQARANSFVGTAQYVSPELLTEKSAC  212 (311)
T ss_dssp             TTCCCBCCCCSCGGGCCHHHHHHSCBC
T ss_pred             CCcccccCcccCcccCCHHHHcCCCCC
Confidence                  356899999999999998885

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.7e-42  Score=260.67  Aligned_cols=161  Identities=17%  Similarity=0.228  Sum_probs=143.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||+|.+..+|+.||+|++...... ..+.+.+|+++++.++||||++++++|.+++.+|+||||++||+|.++
T Consensus        83 G~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~  161 (346)
T 4fih_A           83 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI  161 (346)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEGGGCS-SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHH
T ss_pred             ecCcCeEEEEEEECCCCCEEEEEEEecCchh-HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence            4567899999999999999999999743222 234688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +...                .+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+....   
T Consensus       162 l~~~----------------~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~  225 (346)
T 4fih_A          162 VTHT----------------RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  225 (346)
T ss_dssp             HHHS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred             HHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC
Confidence            8653                489999999999999999999999999999999999999999999999999985533   


Q ss_pred             --ccccceeeeeecccCCCcccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ...+||++|+|||++.+.+|+
T Consensus       226 ~~~~~~GTp~YmAPEvl~~~~y~  248 (346)
T 4fih_A          226 RRKSLVGTPYWMAPELISRLPYG  248 (346)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             cccccccCcCcCCHHHHCCCCCC
Confidence              356899999999999998885

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.2e-41  Score=249.23  Aligned_cols=164  Identities=18%  Similarity=0.253  Sum_probs=134.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--++|.||+|.+..+++.||+|++....  ......++.+|+++++.++||||+++++++.+++.+|++|||++ |+|.
T Consensus        22 G~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~-g~L~  100 (275)
T 3hyh_A           22 GEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAG-NELF  100 (275)
T ss_dssp             EC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC-EEHH
T ss_pred             ecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCCC-CCHH
Confidence            45678899999999999999999997432  33345678999999999999999999999999999999999995 8999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +.+...+               .+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+|+.... 
T Consensus       101 ~~l~~~~---------------~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  165 (275)
T 3hyh_A          101 DYIVQRD---------------KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG  165 (275)
T ss_dssp             HHHHHSC---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence            9987664               499999999999999999999999999999999999999999999999999986543 


Q ss_pred             ---ccccceeeeeecccCCCcccccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRLNVF  181 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~~~~  181 (183)
                         ...+||++|+|||++.+++|+..
T Consensus       166 ~~~~~~~GT~~Y~APE~~~~~~y~~~  191 (275)
T 3hyh_A          166 NFLKTSCGSPNYAAPEVISGKLYAGP  191 (275)
T ss_dssp             ---------CTTSCHHHHSSSSCCCT
T ss_pred             CccCCeeECcccCChhhhcCCCCCCC
Confidence               34678999999999999887543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=9.2e-42  Score=262.40  Aligned_cols=161  Identities=17%  Similarity=0.228  Sum_probs=144.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||+|.+..+|+.||+|++...... ..+.+.+|+.+++.++||||++++++|.+++.+|||||||+||+|.++
T Consensus       160 G~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~  238 (423)
T 4fie_A          160 GEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDI  238 (423)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEESTTCS-SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHH
T ss_pred             ccCcCcEEEEEEECCCCCEEEEEEEeccchh-HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHH
Confidence            5567899999999999999999999744332 234688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +...                .+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+....   
T Consensus       239 i~~~----------------~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~  302 (423)
T 4fie_A          239 VTHT----------------RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP  302 (423)
T ss_dssp             HHHS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred             Hhcc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence            8653                489999999999999999999999999999999999999999999999999985533   


Q ss_pred             --ccccceeeeeecccCCCcccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ...+||++|+|||++.+.+|+
T Consensus       303 ~~~~~~GTp~YmAPEvl~~~~y~  325 (423)
T 4fie_A          303 RRKSLVGTPYWMAPELISRLPYG  325 (423)
T ss_dssp             CBCCCEECTTTCCHHHHTTCCBC
T ss_pred             cccccccCcCcCCHHHHCCCCCC
Confidence              356899999999999998885

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=3.6e-41  Score=250.06  Aligned_cols=166  Identities=17%  Similarity=0.214  Sum_probs=137.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------------ccEEE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------------PHYLL   69 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------------~~~lv   69 (183)
                      |--++|.||+|.+..+++.||+|++.........+.+.+|+++++.++||||+++++++.+.+            .+|++
T Consensus        14 G~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~iv   93 (299)
T 4g31_A           14 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQ   93 (299)
T ss_dssp             EECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEE
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEE
Confidence            456789999999999999999999986666767778999999999999999999999997644            26899


Q ss_pred             EeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEec
Q psy2674          70 LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL  149 (183)
Q Consensus        70 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~d  149 (183)
                      |||+++|+|.+++......            ....+..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|
T Consensus        94 mE~~~gg~L~~~l~~~~~~------------~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~D  161 (299)
T 4g31_A           94 MQLCRKENLKDWMNGRCTI------------EERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGD  161 (299)
T ss_dssp             EECCCSCCHHHHHHTCCSG------------GGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred             EecCCCCcHHHHHHhcCCC------------ChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEcc
Confidence            9999999999999765321            1245567889999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCcc-----------------cccceeeeeecccCCCcccc
Q psy2674         150 SGLSKDTYQK-----------------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       150 fg~a~~~~~~-----------------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ||+|+....+                 ..+||++|+|||++.+++|+
T Consensus       162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~  208 (299)
T 4g31_A          162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYS  208 (299)
T ss_dssp             CCCC--------------------------CCCTTSCHHHHTTCCCC
T ss_pred             CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCC
Confidence            9999854332                 24689999999999998885

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=9.8e-41  Score=246.25  Aligned_cols=162  Identities=20%  Similarity=0.227  Sum_probs=141.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec----CCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD----GDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~   76 (183)
                      |--++|.||+|.+..++..||+|++.. .......+.+.+|+++++.++||||++++++|.+    ++.++++|||+++|
T Consensus        35 G~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg  114 (290)
T 3fpq_A           35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSG  114 (290)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSC
T ss_pred             ecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCC
Confidence            456789999999999999999999973 3456667789999999999999999999999875    34589999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ceecccccceeEec-cCCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLIS-SDLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--ivH~di~~~nil~~-~~~~~ki~dfg~a  153 (183)
                      +|.+++....               .+++..++.++.|++.||.|||+++  |+||||||+|||++ .++.+||+|||+|
T Consensus       115 ~L~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla  179 (290)
T 3fpq_A          115 TLKTYLKRFK---------------VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             BHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             CHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCC
Confidence            9999998764               4899999999999999999999998  99999999999997 4789999999999


Q ss_pred             CCCCc---ccccceeeeeecccCCCcccc
Q psy2674         154 KDTYQ---KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~---~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +....   ...+||+.|+|||++.++ ||
T Consensus       180 ~~~~~~~~~~~~GTp~YmAPE~~~~~-y~  207 (290)
T 3fpq_A          180 TLKRASFAKAVIGTPEFMAPEMYEEK-YD  207 (290)
T ss_dssp             GGCCTTSBEESCSSCCCCCGGGGGTC-CC
T ss_pred             EeCCCCccCCcccCccccCHHHcCCC-CC
Confidence            75433   356889999999998763 54

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.8e-41  Score=252.56  Aligned_cols=157  Identities=19%  Similarity=0.170  Sum_probs=139.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||++.+..+|+.||+|++....      ...+|+.+++.++||||+++++++.+++.+|++|||++||+|.++
T Consensus        67 G~G~fG~Vy~a~~~~~g~~vAiK~i~~~~------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~  140 (336)
T 4g3f_A           67 GRGSFGEVHRMKDKQTGFQCAVKKVRLEV------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQL  140 (336)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEETTT------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHH
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEEECHHH------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHH
Confidence            44578999999999999999999997432      124799999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-ceEEecccCCCCCCcc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SVKISLSGLSKDTYQK-  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-~~ki~dfg~a~~~~~~-  159 (183)
                      +...+               .+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+|+....+ 
T Consensus       141 l~~~~---------------~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~  205 (336)
T 4g3f_A          141 IKQMG---------------CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG  205 (336)
T ss_dssp             HHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred             HHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence            98764               499999999999999999999999999999999999999887 6999999999854332 


Q ss_pred             ---------cccceeeeeecccCCCcccc
Q psy2674         160 ---------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ---------~~~~~~~~~~pe~~~~~~~~  179 (183)
                               ..+||++|+|||++.|++||
T Consensus       206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~  234 (336)
T 4g3f_A          206 LGKSLLTGDYIPGTETHMAPEVVMGKPCD  234 (336)
T ss_dssp             --------CCCCCCGGGCCHHHHTTCCCC
T ss_pred             cccceecCCccccCccccCHHHHCCCCCC
Confidence                     24689999999999998885

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.1e-40  Score=247.89  Aligned_cols=177  Identities=29%  Similarity=0.470  Sum_probs=137.3

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--++|.||++.     +..++..||||++... +....+.|.+|+++++.++||||++++++|.+++.+++||||+++|
T Consensus        50 G~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G  128 (329)
T 4aoj_A           50 GEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHG  128 (329)
T ss_dssp             EECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             ccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCC
Confidence            445678888875     4567899999999744 4556678999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++....................+++..++.++.|++.|+.|||+++|+||||||+|||++.++.+||+|||+|+..
T Consensus       129 ~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~  208 (329)
T 4aoj_A          129 DLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI  208 (329)
T ss_dssp             BHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred             cHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceec
Confidence            99999987654322222222223346899999999999999999999999999999999999999999999999999865


Q ss_pred             Ccc-------cccceeeeeecccCCCcccc
Q psy2674         157 YQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       157 ~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...       ...+|+.|+|||++.+.+|+
T Consensus       209 ~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~  238 (329)
T 4aoj_A          209 YSTDYYRVGGRTMLPIRWMPPESILYRKFT  238 (329)
T ss_dssp             -----------CCCCGGGCCHHHHTTCCCC
T ss_pred             cCCCcceecCcccccccccChhhhcCCCCC
Confidence            332       34578899999999998774

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=5e-40  Score=243.78  Aligned_cols=175  Identities=30%  Similarity=0.488  Sum_probs=138.4

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--++|.||++.     ...++..||||.+... .....+++.+|+++++.++||||++++++|.+++..++||||+++|
T Consensus        22 G~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G  100 (299)
T 4asz_A           22 GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHG  100 (299)
T ss_dssp             EC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred             eeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCC
Confidence            444566777765     3457899999999754 4455678999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++...++.....  ........+++..++.++.|++.|+.|||+++|+||||||+|||++.++.+||+|||+|+..
T Consensus       101 ~L~~~l~~~~~~~~~~--~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~  178 (299)
T 4asz_A          101 DLNKFLRAHGPDAVLM--AEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV  178 (299)
T ss_dssp             BHHHHHHHTSHHHHHC------CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHH
T ss_pred             cHHHHHHhcCcccccc--cccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceec
Confidence            9999997753210000  00111236899999999999999999999999999999999999999999999999999854


Q ss_pred             Ccc-------cccceeeeeecccCCCcccc
Q psy2674         157 YQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       157 ~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...       ...+|+.|+|||++.+.+|+
T Consensus       179 ~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~  208 (299)
T 4asz_A          179 YSTDYYRVGGHTMLPIRWMPPESIMYRKFT  208 (299)
T ss_dssp             TGGGCEEETTTEEECGGGCCHHHHHHCCCC
T ss_pred             CCCCceeecCceecChhhcCHHHHcCCCCC
Confidence            332       23468889999999887774

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.8e-41  Score=251.43  Aligned_cols=163  Identities=18%  Similarity=0.238  Sum_probs=135.0

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |--++|.||+|.+   ..+++.||+|++.... ......++.+|+++++.++||||+++++++++++.+|++|||++||+
T Consensus        33 G~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~  112 (304)
T 3ubd_A           33 GQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGD  112 (304)
T ss_dssp             ECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCE
T ss_pred             ecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCC
Confidence            4556788888865   4578899999986432 11122367889999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++...+               .+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+...
T Consensus       113 L~~~l~~~~---------------~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~  177 (304)
T 3ubd_A          113 LFTRLSKEV---------------MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI  177 (304)
T ss_dssp             EHHHHHHHC---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred             HHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence            999998764               49999999999999999999999999999999999999999999999999997543


Q ss_pred             c-----ccccceeeeeecccCCCcccc
Q psy2674         158 Q-----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~-----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .     ...+||++|+|||++.+++|+
T Consensus       178 ~~~~~~~~~~GT~~YmAPE~~~~~~y~  204 (304)
T 3ubd_A          178 DHEKKAYSFCGTVEYMAPEVVNRRGHT  204 (304)
T ss_dssp             ---CCCCSCCCCGGGCCHHHHHTSCCC
T ss_pred             CCCccccccccCcccCCHHHhccCCCC
Confidence            2     356789999999999998886

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=7e-40  Score=243.92  Aligned_cols=178  Identities=25%  Similarity=0.365  Sum_probs=141.7

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--++|.||++.     +..+++.||||.+....+....+.|.+|+.+++.++||||++++++|.+++..++||||+++|
T Consensus        35 G~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G  114 (308)
T 4gt4_A           35 GEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHG  114 (308)
T ss_dssp             EECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSC
T ss_pred             ccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCC
Confidence            445677788776     445789999999986555555678999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          77 DLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      +|.+++....+...... .........+++..++.++.|++.|+.|||+++++||||||+|||++.++.+||+|||+|+.
T Consensus       115 ~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~  194 (308)
T 4gt4_A          115 DLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFRE  194 (308)
T ss_dssp             BHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCG
T ss_pred             cHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCccccee
Confidence            99999976543221111 11122234689999999999999999999999999999999999999999999999999985


Q ss_pred             CCcc-------cccceeeeeecccCCCcccc
Q psy2674         156 TYQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       156 ~~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ....       ...+|+.|+|||++.+..|+
T Consensus       195 ~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s  225 (308)
T 4gt4_A          195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFS  225 (308)
T ss_dssp             GGGGGCBCSSSSSCBCGGGCCHHHHHHCCCC
T ss_pred             ccCCCceeEecccccCCcccCHHHHhCCCCC
Confidence            4332       34678899999999877764

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=6.7e-39  Score=238.08  Aligned_cols=158  Identities=18%  Similarity=0.246  Sum_probs=134.6

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeecc-CCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLV-HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~-~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      +|--++|.||++....   .||||+++ ...+.+..+.+.+|+.+++.++||||+++++++.+ +.+++||||+++|+|.
T Consensus        44 iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~  119 (307)
T 3omv_A           44 IGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLY  119 (307)
T ss_dssp             CCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHH
T ss_pred             EeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHH
Confidence            3667889999997543   58999987 34456677889999999999999999999998864 6789999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++.....              .+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.... 
T Consensus       120 ~~l~~~~~--------------~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~  185 (307)
T 3omv_A          120 KHLHVQET--------------KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW  185 (307)
T ss_dssp             HHHHTSCC--------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC----
T ss_pred             HHHhhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccC
Confidence            99975432              589999999999999999999999999999999999999999999999999985432 


Q ss_pred             ------ccccceeeeeecccCCCc
Q psy2674         159 ------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ------~~~~~~~~~~~pe~~~~~  176 (183)
                            ....||+.|+|||++.+.
T Consensus       186 ~~~~~~~~~~GT~~ymAPE~l~~~  209 (307)
T 3omv_A          186 SGSQQVEQPTGSVLWMAPEVIRMQ  209 (307)
T ss_dssp             --------CCCCTTSCCHHHHHCC
T ss_pred             CcceeecccccCCCccCHHHhhcc
Confidence                  235789999999998654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.4e-38  Score=241.05  Aligned_cols=161  Identities=18%  Similarity=0.292  Sum_probs=139.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec------CCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRD------GDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~   74 (183)
                      |--.+|.||+|.+..+|+.||+|++... ......+++.+|+++++.++||||+++++++..      .+.+|++|||++
T Consensus        63 G~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~  142 (398)
T 4b99_A           63 GNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME  142 (398)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS
T ss_pred             ecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC
Confidence            5567899999999999999999999744 345556688999999999999999999999764      356899999997


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       |+|.+++...+               .+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+
T Consensus       143 -g~L~~~i~~~~---------------~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~  206 (398)
T 4b99_A          143 -SDLHQIIHSSQ---------------PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMAR  206 (398)
T ss_dssp             -EEHHHHHTSSS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred             -CCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceee
Confidence             78999886543               59999999999999999999999999999999999999999999999999998


Q ss_pred             CCCc---------ccccceeeeeecccCCCccc
Q psy2674         155 DTYQ---------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       155 ~~~~---------~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....         ...+||++|+|||++.|..|
T Consensus       207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~  239 (398)
T 4b99_A          207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE  239 (398)
T ss_dssp             CC-------CCCCCSSCCCCTTCCHHHHTTCSC
T ss_pred             ecccCccccccccccceeChHhcCHHHhcCCCC
Confidence            5432         24689999999999887544

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2.9e-37  Score=233.52  Aligned_cols=178  Identities=21%  Similarity=0.351  Sum_probs=142.2

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecC-CccEEEEeeCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDG-DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~-~~~~lv~e~~~   74 (183)
                      |--++|.||+|..     ...++.||+|.+.........+.+.+|+++++.++ ||||++++++|.++ +.+++|||||+
T Consensus        73 G~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~  152 (353)
T 4ase_A           73 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK  152 (353)
T ss_dssp             EECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCT
T ss_pred             ecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCC
Confidence            4456778887754     34567899999987777777778999999999995 59999999999764 57899999999


Q ss_pred             CCCHHHHHHhhccCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          75 WGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      +|+|.+++........... .........+++..++.++.||+.|+.|||+++++||||||+|||++.++.+||+|||+|
T Consensus       153 ~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGla  232 (353)
T 4ase_A          153 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA  232 (353)
T ss_dssp             TEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGG
T ss_pred             CCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhh
Confidence            9999999987543211110 011112235889999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcc-------cccceeeeeecccCCCcccc
Q psy2674         154 KDTYQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +....+       ...+|+.|+|||++.++.|+
T Consensus       233 r~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~  265 (353)
T 4ase_A          233 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT  265 (353)
T ss_dssp             SCTTTCTTSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred             hhcccCCCceeeccccccccccCHHHHhcCCCC
Confidence            865432       24567889999999887774

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=5.6e-37  Score=246.10  Aligned_cols=163  Identities=18%  Similarity=0.185  Sum_probs=140.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-----CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-----KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--++|+||.|.+..+|+.||+|++.+.     ..........+++.+++.++||||++++++|.+++.+|+||||++||
T Consensus       198 G~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GG  277 (689)
T 3v5w_A          198 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG  277 (689)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             ecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCC
Confidence            5568899999999999999999998632     22222223345577778889999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++...+               .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|...
T Consensus       278 dL~~~l~~~~---------------~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~  342 (689)
T 3v5w_A          278 DLHYHLSQHG---------------VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  342 (689)
T ss_dssp             BHHHHHHHHC---------------CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             cHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence            9999998775               4999999999999999999999999999999999999999999999999999865


Q ss_pred             Cc---ccccceeeeeecccCC-Ccccc
Q psy2674         157 YQ---KEYYKYRWVICSNIAE-GRRLN  179 (183)
Q Consensus       157 ~~---~~~~~~~~~~~pe~~~-~~~~~  179 (183)
                      ..   ...+||++|+|||++. +.+|+
T Consensus       343 ~~~~~~t~~GTp~YmAPEvl~~~~~y~  369 (689)
T 3v5w_A          343 SKKKPHASVGTHGYMAPEVLQKGVAYD  369 (689)
T ss_dssp             SSCCCCSCCSCGGGCCHHHHSTTCCCC
T ss_pred             CCCCCCCccCCcCccCHHHHhCCCCCC
Confidence            43   3578999999999986 45664

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.9e-37  Score=228.55  Aligned_cols=155  Identities=15%  Similarity=0.208  Sum_probs=126.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC----ccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD----PHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~   77 (183)
                      |--++|.||++..  +|+.||||++......  .....+|+..+..++||||+++++++.+++    .+++||||+++|+
T Consensus        12 G~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~--~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gs   87 (303)
T 3hmm_A           12 GKGRFGEVWRGKW--RGEEVAVKIFSSREER--SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS   87 (303)
T ss_dssp             EECSSSEEEEEEE--TTEEEEEEEECGGGHH--HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred             eeCCCeEEEEEEE--CCEEEEEEEECccchh--hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCc
Confidence            4567888998865  6899999998744222  223345666677889999999999998654    4789999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CceecccccceeEeccCCceEEec
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--------RLIHKDIAARNCLISSDLSVKISL  149 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~ivH~di~~~nil~~~~~~~ki~d  149 (183)
                      |.+++...                .+++..++.++.|++.|+.|||++        +|+||||||+|||++.++.+||+|
T Consensus        88 L~~~l~~~----------------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D  151 (303)
T 3hmm_A           88 LFDYLNRY----------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             HHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred             HHHHHHhC----------------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence            99999754                488999999999999999999987        999999999999999999999999


Q ss_pred             ccCCCCCCc---------ccccceeeeeecccCCCc
Q psy2674         150 SGLSKDTYQ---------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       150 fg~a~~~~~---------~~~~~~~~~~~pe~~~~~  176 (183)
                      ||+|+....         ....||++|+|||++.+.
T Consensus       152 FGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~  187 (303)
T 3hmm_A          152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS  187 (303)
T ss_dssp             CTTCEEEETTTTEESCC-----CCGGGCCHHHHTTC
T ss_pred             CCCCccccCCCCceeeecccccccccccCHHHhccc
Confidence            999874322         235689999999999764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.2e-36  Score=243.41  Aligned_cols=163  Identities=18%  Similarity=0.254  Sum_probs=143.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||+|.+..+|+.||+|++.... ....+.+.+|+++++.++||||++++++|.+++.++++|||++||+|.++
T Consensus       166 G~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~  244 (573)
T 3uto_A          166 GTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEK  244 (573)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHH
T ss_pred             eeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHH
Confidence            34467899999999999999999987543 34456789999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc--CCceEEecccCCCCCCcc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS--DLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~--~~~~ki~dfg~a~~~~~~  159 (183)
                      +.....              .+++..+..++.||+.||.|||+++|+||||||+|||++.  .+.+||+|||+|+.....
T Consensus       245 i~~~~~--------------~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~  310 (573)
T 3uto_A          245 VADEHN--------------KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  310 (573)
T ss_dssp             HTCTTS--------------CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred             HHHhCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence            864422              5899999999999999999999999999999999999974  489999999999876543


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ..+||++|+|||++.+++|+
T Consensus       311 ~~~~~~~GT~~y~APEv~~~~~y~  334 (573)
T 3uto_A          311 QSVKVTTGTAEFAAPEVAEGKPVG  334 (573)
T ss_dssp             SEEEEECSSGGGCCHHHHTTCCBC
T ss_pred             CceeeeEECccccCHHHhCCCCCC
Confidence                45789999999999998885

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=3.4e-36  Score=228.66  Aligned_cols=155  Identities=14%  Similarity=0.103  Sum_probs=133.2

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |--++|.||+|.+   ..+++.||+|.+.......   ++.+|+++++.+ +||||+++++++.+++.++++|||+++++
T Consensus        30 G~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~---~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~  106 (361)
T 4f9c_A           30 GEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPI---RIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHES  106 (361)
T ss_dssp             EECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHH---HHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCC
T ss_pred             ecccCcEEEEEEEcccCCCCCEEEEEEEccccCHH---HHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCccc
Confidence            4567888998865   3578999999987554433   678999999998 79999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC-CceEEecccCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGLSKDT  156 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~-~~~ki~dfg~a~~~  156 (183)
                      |.+++.                  .+++..++.++.|++.||.|||++||+||||||+|||++.+ +.+||+|||+|+..
T Consensus       107 L~~~~~------------------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~  168 (361)
T 4f9c_A          107 FLDILN------------------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGT  168 (361)
T ss_dssp             HHHHHT------------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             HHHHHc------------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCccc
Confidence            999882                  48899999999999999999999999999999999999866 89999999999743


Q ss_pred             Cc---------------------------------ccccceeeeeecccCCCcc
Q psy2674         157 YQ---------------------------------KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       157 ~~---------------------------------~~~~~~~~~~~pe~~~~~~  177 (183)
                      ..                                 ...+||++|+|||++.+.+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~  222 (361)
T 4f9c_A          169 HDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCP  222 (361)
T ss_dssp             TTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCS
T ss_pred             CCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCC
Confidence            21                                 1346899999999998754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.3e-34  Score=216.42  Aligned_cols=163  Identities=20%  Similarity=0.323  Sum_probs=145.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.+|.||++.+..+++.||+|++.. ..+....+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.+
T Consensus        24 G~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~  103 (328)
T 3fe3_A           24 GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD  103 (328)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHH
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHH
Confidence            445788999999999999999999874 3455667788999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      ++...+               .+++..++.++.|++.|+.|||+++++||||||+||+++.++.+||+|||++.....  
T Consensus       104 ~l~~~~---------------~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  168 (328)
T 3fe3_A          104 YLVAHG---------------RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG  168 (328)
T ss_dssp             HHHHHC---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC
T ss_pred             HHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC
Confidence            997764               489999999999999999999999999999999999999999999999999975433  


Q ss_pred             --ccccceeeeeecccCCCcccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ...+++++|+|||++.+..|+
T Consensus       169 ~~~~~~gt~~y~aPE~~~~~~~~  191 (328)
T 3fe3_A          169 KLDAFCGAPPYAAPELFQGKKYD  191 (328)
T ss_dssp             GGGTTSSSGGGCCHHHHHTCCCC
T ss_pred             ccccccCCcceeCcccccCCCcC
Confidence              356789999999999887664

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=2.5e-33  Score=211.49  Aligned_cols=163  Identities=15%  Similarity=0.193  Sum_probs=142.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|+||++.+..+++.||+|++....  .......+.+|+.+++.++||||+++++++.+++..+++|||+++++|.
T Consensus        14 G~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~   93 (337)
T 1o6l_A           14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF   93 (337)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHH
Confidence            45678899999999999999999986321  1122446889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+++.... 
T Consensus        94 ~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  158 (337)
T 1o6l_A           94 FHLSRER---------------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             HHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence            9997764               489999999999999999999999999999999999999999999999999985322 


Q ss_pred             ----ccccceeeeeecccCCCcccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...++|+.|+|||++.+.+|+
T Consensus       159 ~~~~~~~~gt~~y~aPE~~~~~~~~  183 (337)
T 1o6l_A          159 GATMKTFCGTPEYLAPEVLEDNDYG  183 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSSSCBC
T ss_pred             CCcccccccChhhCChhhhcCCCCC
Confidence                356789999999999887764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=1.3e-32  Score=205.01  Aligned_cols=163  Identities=21%  Similarity=0.387  Sum_probs=143.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.||+|.+.. .+....+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.++
T Consensus        19 G~G~~g~V~~~~~~~~~~~va~K~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~   97 (310)
T 3s95_A           19 GKGCFGQAIKVTHRETGEVMVMKELIR-FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGI   97 (310)
T ss_dssp             ECCSSEEEEEEEETTTCCEEEEEEESC-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHH
T ss_pred             cCCCCEEEEEEEECCCCcEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHH
Confidence            556788999999999999999999854 3455667899999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..++.++.|++.||.|||+++++|+||||+||+++.++.+||+|||++......  
T Consensus        98 l~~~~~--------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  163 (310)
T 3s95_A           98 IKSMDS--------------QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKT  163 (310)
T ss_dssp             HHHCCT--------------TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC----
T ss_pred             HHhccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccc
Confidence            987432              5889999999999999999999999999999999999999999999999999754321  


Q ss_pred             -----------------cccceeeeeecccCCCcccc
Q psy2674         160 -----------------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 -----------------~~~~~~~~~~pe~~~~~~~~  179 (183)
                                       ...+|+.|+|||++.+..++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  200 (310)
T 3s95_A          164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYD  200 (310)
T ss_dssp             ----------------CCCCSCGGGCCHHHHTTCCCC
T ss_pred             cccccccccccccccccccCCCcceeCHHHhcCCCCC
Confidence                             34678899999999887664

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=4.5e-33  Score=213.94  Aligned_cols=163  Identities=18%  Similarity=0.298  Sum_probs=141.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.+|+||++.+..+++.||+|++...  ......+.+.+|..++..+ +||||+++++++.+++..+++|||+++++|
T Consensus        61 G~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L  140 (396)
T 4dc2_A           61 GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL  140 (396)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcH
Confidence            4457899999999999999999998743  2333445678899999877 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      ..++....               .+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+... 
T Consensus       141 ~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~  205 (396)
T 4dc2_A          141 MFHMQRQR---------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  205 (396)
T ss_dssp             HHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence            99998764               48999999999999999999999999999999999999999999999999998532 


Q ss_pred             ----cccccceeeeeecccCCCcccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ....++|+.|+|||++.+.+|+
T Consensus       206 ~~~~~~~~~gt~~Y~aPE~l~~~~~~  231 (396)
T 4dc2_A          206 PGDTTSTFCGTPNYIAPEILRGEDYG  231 (396)
T ss_dssp             TTCCBCCCCBCGGGCCHHHHTTCCBC
T ss_pred             CCCccccccCCcccCCchhhcCCCCC
Confidence                2356789999999999987764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=1.4e-32  Score=208.01  Aligned_cols=163  Identities=19%  Similarity=0.299  Sum_probs=144.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.+|.||++.+..+++.||+|++...  ......+.+.+|..+++.+ +||||+++++++.+++..+++|||+++++|
T Consensus        18 G~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L   97 (345)
T 3a8x_A           18 GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL   97 (345)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             EecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcH
Confidence            4457889999999999999999999743  3455666788999999988 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      .+++....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+++... 
T Consensus        98 ~~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~  162 (345)
T 3a8x_A           98 MFHMQRQR---------------KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR  162 (345)
T ss_dssp             HHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence            99997764               48999999999999999999999999999999999999999999999999998532 


Q ss_pred             ----cccccceeeeeecccCCCcccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ....++|+.|+|||++.+..|+
T Consensus       163 ~~~~~~~~~gt~~y~aPE~~~~~~~~  188 (345)
T 3a8x_A          163 PGDTTSTFCGTPNYIAPEILRGEDYG  188 (345)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             CCCcccccCCCccccCccccCCCCCC
Confidence                2346789999999999887763

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.2e-32  Score=206.46  Aligned_cols=166  Identities=17%  Similarity=0.223  Sum_probs=139.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc----------------
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP----------------   65 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----------------   65 (183)
                      |.-.+|.||++.+..+++.||+|++.........+.+.+|+.+++.++||||+++++++.+...                
T Consensus        15 G~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (332)
T 3qd2_B           15 GRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDES   94 (332)
T ss_dssp             ECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-------
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhcccc
Confidence            5567889999999999999999999755555556789999999999999999999999865432                


Q ss_pred             -----------------------------------------cEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCC
Q psy2674          66 -----------------------------------------HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLS  104 (183)
Q Consensus        66 -----------------------------------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~  104 (183)
                                                               .+++|||+++++|.+++......            ....
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~------------~~~~  162 (332)
T 3qd2_B           95 TDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL------------EDRE  162 (332)
T ss_dssp             -------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG------------GGSC
T ss_pred             ccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc------------cchh
Confidence                                                     78999999999999999865321            1356


Q ss_pred             HHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-----------------cccceeee
Q psy2674         105 TSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-----------------EYYKYRWV  167 (183)
Q Consensus       105 ~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-----------------~~~~~~~~  167 (183)
                      +..++.++.|++.|+.|||+++++||||||+||+++.++.+||+|||++......                 ...+|+.|
T Consensus       163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  242 (332)
T 3qd2_B          163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY  242 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence            6678999999999999999999999999999999999999999999999855432                 24578999


Q ss_pred             eecccCCCcccc
Q psy2674         168 ICSNIAEGRRLN  179 (183)
Q Consensus       168 ~~pe~~~~~~~~  179 (183)
                      +|||++.+.+++
T Consensus       243 ~aPE~~~~~~~~  254 (332)
T 3qd2_B          243 MSPEQIHGNNYS  254 (332)
T ss_dssp             SCHHHHHCCCCC
T ss_pred             cChHHhcCCCCc
Confidence            999999876654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.5e-32  Score=203.56  Aligned_cols=163  Identities=25%  Similarity=0.352  Sum_probs=140.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC--CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH--SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..++..||+|.+..  .......+.+.+|+..++.++||||+++++++.+++..+++|||+++++|.
T Consensus        20 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~   99 (294)
T 4eqm_A           20 GGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLS   99 (294)
T ss_dssp             EEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred             ccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHH
Confidence            344678899999999999999999853  345566678999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++...+               .+++..++.++.|++.++.|||+++++||||||+||+++.++.++|+|||++......
T Consensus       100 ~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  164 (294)
T 4eqm_A          100 EYIESHG---------------PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET  164 (294)
T ss_dssp             HHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence            9998764               4899999999999999999999999999999999999999999999999999865432


Q ss_pred             ------cccceeeeeecccCCCcccc
Q psy2674         160 ------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~~~~~~  179 (183)
                            ...+++.|+|||++.+..++
T Consensus       165 ~~~~~~~~~gt~~y~aPE~~~~~~~~  190 (294)
T 4eqm_A          165 SLTQTNHVLGTVQYFSPEQAKGEATD  190 (294)
T ss_dssp             ----------CCSSCCHHHHHTCCCC
T ss_pred             cccccCccccCccccCHhHhcCCCCC
Confidence                  35679999999998886654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=9.5e-33  Score=204.92  Aligned_cols=161  Identities=16%  Similarity=0.233  Sum_probs=140.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.+|.||++.+..+++.||+|.+....... .+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|.++
T Consensus        29 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  107 (297)
T 3fxz_A           29 GQGASGTVYTAMDVATGQEVAIRQMNLQQQPK-KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDV  107 (297)
T ss_dssp             EEETTEEEEEEEBTTTCCEEEEEEEEGGGCSC-HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHH
T ss_pred             ccCCCeEEEEEEECCCCcEEEEEEeecccccH-HHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHH
Confidence            44567899999999999999999986333222 34688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +...                .+++..++.++.|++.|+.|||++|++||||||+||+++.++.++|+|||++.....   
T Consensus       108 ~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A          108 VTET----------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             HHHS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred             Hhhc----------------CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc
Confidence            8754                488999999999999999999999999999999999999999999999999875443   


Q ss_pred             --ccccceeeeeecccCCCcccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ....+++.|+|||++.+.+|+
T Consensus       172 ~~~~~~gt~~y~aPE~~~~~~~~  194 (297)
T 3fxz_A          172 KRSTMVGTPYWMAPEVVTRKAYG  194 (297)
T ss_dssp             CBCCCCSCGGGCCHHHHHCSCBC
T ss_pred             ccCCccCCcCccChhhhcCCCCC
Confidence              245679999999999887763

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2.9e-33  Score=212.33  Aligned_cols=163  Identities=16%  Similarity=0.213  Sum_probs=139.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.+|.||++.+..+++.||+|++....  .....+.+.+|..+++.+ +||||+++++++.+++..+++|||+++++|
T Consensus        32 G~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L  111 (353)
T 3txo_A           32 GKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDL  111 (353)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             eeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcH
Confidence            44567899999999999999999987431  222345678899999988 799999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+|.....
T Consensus       112 ~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~  176 (353)
T 3txo_A          112 MFHIQKSR---------------RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC  176 (353)
T ss_dssp             HHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence            99998764               489999999999999999999999999999999999999999999999999985332


Q ss_pred             -----ccccceeeeeecccCCCcccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                           ...++|+.|+|||++.+..|+
T Consensus       177 ~~~~~~~~~gt~~y~aPE~~~~~~~~  202 (353)
T 3txo_A          177 NGVTTATFCGTPDYIAPEILQEMLYG  202 (353)
T ss_dssp             ---------CCGGGCCHHHHHHHHCT
T ss_pred             CCccccccCCCcCeEChhhcCCCCcC
Confidence                 246789999999998776553

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=6.4e-33  Score=210.25  Aligned_cols=163  Identities=18%  Similarity=0.199  Sum_probs=143.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|.||.+.+..+++.||+|++....  .....+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.
T Consensus        50 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~  129 (350)
T 1rdq_E           50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF  129 (350)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred             ecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHH
Confidence            44577899999999999999999986331  1123457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++...+               .+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus       130 ~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~  194 (350)
T 1rdq_E          130 SHLRRIG---------------RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             HHHHHHC---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC
Confidence            9998764               4899999999999999999999999999999999999999999999999999865443


Q ss_pred             --cccceeeeeecccCCCcccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ..++|+.|+|||++.+..|+
T Consensus       195 ~~~~~gt~~y~aPE~~~~~~~~  216 (350)
T 1rdq_E          195 TWTLCGTPEALAPEIILSKGYN  216 (350)
T ss_dssp             BCCCEECGGGCCHHHHTTCCBC
T ss_pred             cccccCCccccCHHHhcCCCCC
Confidence              56789999999999887764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=5.1e-33  Score=208.27  Aligned_cols=163  Identities=18%  Similarity=0.233  Sum_probs=142.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++.....  ....+.+.+|..+++.++||||+++++++.+.+..+++|||+++++|.
T Consensus        15 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~   94 (318)
T 1fot_A           15 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELF   94 (318)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHH
Confidence            455788999999999999999999863211  112346788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++......
T Consensus        95 ~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~  159 (318)
T 1fot_A           95 SLLRKSQ---------------RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  159 (318)
T ss_dssp             HHHHHTS---------------SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc
Confidence            9998653               4899999999999999999999999999999999999999999999999999865443


Q ss_pred             --cccceeeeeecccCCCcccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ...+|+.|+|||++.+.+|+
T Consensus       160 ~~~~~gt~~y~aPE~~~~~~~~  181 (318)
T 1fot_A          160 TYTLCGTPDYIAPEVVSTKPYN  181 (318)
T ss_dssp             BCCCCSCTTTCCHHHHTTCCBC
T ss_pred             cccccCCccccCHhHhcCCCCC
Confidence              46789999999999887764

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1e-32  Score=209.89  Aligned_cols=163  Identities=19%  Similarity=0.253  Sum_probs=141.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH-----HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD-----EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.+|.||++.+..++..||+|++......     ...+.+.+|+.+++.++||||+++++++.+++..+++|||++++
T Consensus        21 G~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg  100 (361)
T 2yab_A           21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGG  100 (361)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             eeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCC
Confidence            4456789999999999999999998744321     12457899999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC----ceEEecccC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL----SVKISLSGL  152 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~----~~ki~dfg~  152 (183)
                      +|.+++....               .+++..++.++.|++.||.|||++|++||||||+||+++.++    .+||+|||+
T Consensus       101 ~L~~~l~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~  165 (361)
T 2yab_A          101 ELFDFLAQKE---------------SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (361)
T ss_dssp             BHHHHHTTCS---------------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred             cHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence            9999996543               489999999999999999999999999999999999998766    799999999


Q ss_pred             CCCCCc----ccccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +.....    ...++|+.|+|||++.+.+|+
T Consensus       166 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  196 (361)
T 2yab_A          166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG  196 (361)
T ss_dssp             CEECCTTCCCCCCCSCGGGCCHHHHTTCCCC
T ss_pred             ceEcCCCCccccCCCCccEECchHHcCCCCC
Confidence            986543    346789999999999887664

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=2.1e-32  Score=213.11  Aligned_cols=163  Identities=15%  Similarity=0.190  Sum_probs=142.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.+|.||++.+..+++.+|+|++.... .....+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|.+
T Consensus        20 G~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~   99 (444)
T 3soa_A           20 GKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFE   99 (444)
T ss_dssp             EEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHH
T ss_pred             ccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHH
Confidence            45578899999999999999999998544 34455678999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec---cCCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~---~~~~~ki~dfg~a~~~~  157 (183)
                      .+....               .+++..+..++.|++.||.|||++|++||||||+||+++   .++.+||+|||++....
T Consensus       100 ~i~~~~---------------~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A          100 DIVARE---------------YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             HHHHCS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred             HHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence            987653               489999999999999999999999999999999999997   46889999999997654


Q ss_pred             cc-----cccceeeeeecccCCCcccc
Q psy2674         158 QK-----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~-----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..     ...+|++|+|||++.+.+|+
T Consensus       165 ~~~~~~~~~~gt~~Y~APE~l~~~~~~  191 (444)
T 3soa_A          165 GEQQAWFGFAGTPGYLSPEVLRKDPYG  191 (444)
T ss_dssp             TTCCBCCCSCSCGGGCCHHHHTTCCBC
T ss_pred             CCCceeecccCCcccCCHHHhcCCCCC
Confidence            32     35789999999999887664

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2.7e-32  Score=207.72  Aligned_cols=163  Identities=15%  Similarity=0.217  Sum_probs=142.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++... ......+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|.+
T Consensus        38 G~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~  117 (362)
T 2bdw_A           38 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE  117 (362)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHH
Confidence            3446788999999999999999999744 345566788999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC---CceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---LSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~---~~~ki~dfg~a~~~~  157 (183)
                      .+....               .+++..++.++.|++.||.|||+++++||||||+||+++.+   +.+||+|||++....
T Consensus       118 ~l~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~  182 (362)
T 2bdw_A          118 DIVARE---------------FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  182 (362)
T ss_dssp             HHTTCS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred             HHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence            886543               48999999999999999999999999999999999999754   469999999998655


Q ss_pred             cc----cccceeeeeecccCCCcccc
Q psy2674         158 QK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..    ...+|+.|+|||++.+.+|+
T Consensus       183 ~~~~~~~~~gt~~y~aPE~~~~~~~~  208 (362)
T 2bdw_A          183 DSEAWHGFAGTPGYLSPEVLKKDPYS  208 (362)
T ss_dssp             TCCSCCCSCSCTTTCCHHHHTTCCCC
T ss_pred             CCcccccCCCCccccCHHHHccCCCC
Confidence            43    35779999999999887664

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.98  E-value=1.2e-32  Score=208.29  Aligned_cols=163  Identities=19%  Similarity=0.274  Sum_probs=141.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.+|.||++.+..+++.||+|++....  .....+.+.+|..++..+ +||||+++++++.+++..+++|||+++++|
T Consensus        26 G~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L  105 (345)
T 1xjd_A           26 GKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL  105 (345)
T ss_dssp             EECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcH
Confidence            45578899999999999999999987431  111234677889888876 999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      .+++...+               .+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||+++... 
T Consensus       106 ~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  170 (345)
T 1xjd_A          106 MYHIQSCH---------------KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML  170 (345)
T ss_dssp             HHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             HHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence            99998764               48999999999999999999999999999999999999999999999999998542 


Q ss_pred             ----cccccceeeeeecccCCCcccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ....++|+.|+|||++.+.+|+
T Consensus       171 ~~~~~~~~~gt~~y~aPE~~~~~~~~  196 (345)
T 1xjd_A          171 GDAKTNTFCGTPDYIAPEILLGQKYN  196 (345)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             CCCcccCCCCCcccCChhhhcCCCCC
Confidence                2356789999999999887764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.98  E-value=1.9e-32  Score=209.82  Aligned_cols=159  Identities=13%  Similarity=0.206  Sum_probs=139.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|.||.+.+..+++.||+|++....  .....+.+.+|+++++.++||||+++++++.+++..++++||+.+++|.
T Consensus        24 G~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~  103 (384)
T 4fr4_A           24 GKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLR  103 (384)
T ss_dssp             ECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHH
Confidence            55678899999999999999999986321  1122457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      .++....               .+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||++..... 
T Consensus       104 ~~l~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~  168 (384)
T 4fr4_A          104 YHLQQNV---------------HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE  168 (384)
T ss_dssp             HHHHTTC---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence            9997653               489999999999999999999999999999999999999999999999999985533 


Q ss_pred             ---ccccceeeeeecccCCC
Q psy2674         159 ---KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~  175 (183)
                         ....+|+.|+|||++.+
T Consensus       169 ~~~~~~~gt~~Y~aPE~~~~  188 (384)
T 4fr4_A          169 TQITTMAGTKPYMAPEMFSS  188 (384)
T ss_dssp             CCBCCCCSCGGGCCGGGTCC
T ss_pred             CceeccCCCccccCCeeecc
Confidence               35678999999999874

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=4.8e-32  Score=203.24  Aligned_cols=162  Identities=13%  Similarity=0.122  Sum_probs=141.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.+|+|.+....  .....+.+|+.+++.++||||+++++++.+.+..+++|||+++++|.+.
T Consensus        14 G~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~   91 (321)
T 1tki_A           14 GRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFER   91 (321)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHH
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHH
Confidence            44578899999999999999999987432  3345788999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc--CCceEEecccCCCCCCcc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS--DLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~--~~~~ki~dfg~a~~~~~~  159 (183)
                      +.....              .+++..++.++.|++.|+.|||++|++||||||+||+++.  ++.++|+|||++......
T Consensus        92 l~~~~~--------------~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~  157 (321)
T 1tki_A           92 INTSAF--------------ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             HTSSSC--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC
Confidence            865432              5899999999999999999999999999999999999986  789999999999865443


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...+++.|+|||++.+.+++
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~  181 (321)
T 1tki_A          158 DNFRLLFTAPEYYAPEVHQHDVVS  181 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTTCEEC
T ss_pred             CccccccCChhhcCcHHhcCCCCC
Confidence                35678999999999887653

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.98  E-value=1.7e-31  Score=203.86  Aligned_cols=178  Identities=22%  Similarity=0.382  Sum_probs=142.4

Q ss_pred             CCCCCceeeeccC-------CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKASD-------PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |.-.+|.||++.+       ..++..||+|++.........+.+.+|+.+++.+ +||||+++++++.+++..+++|||+
T Consensus        90 G~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~  169 (370)
T 2psq_A           90 GEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA  169 (370)
T ss_dssp             SCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             eeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcC
Confidence            4556788888864       3567889999998766677777899999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          74 DWGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++++|.+++........... .........+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+
T Consensus       170 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  249 (370)
T 2psq_A          170 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL  249 (370)
T ss_dssp             TTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSS
T ss_pred             CCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccC
Confidence            99999999987643111100 00111223578899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc-------cccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++.....       ...++..|+|||++.+..|+
T Consensus       250 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  283 (370)
T 2psq_A          250 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYT  283 (370)
T ss_dssp             CEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCC
T ss_pred             CcccCcccceecccCCCcccceECHhHhcCCCCC
Confidence            9854332       23346789999998877653

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.98  E-value=5e-32  Score=203.51  Aligned_cols=163  Identities=18%  Similarity=0.232  Sum_probs=141.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH-----HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD-----EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.+..++..||+|++......     ...+.+.+|+.+++.++||||+++++++.+++..+++|||++++
T Consensus        20 G~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~   99 (326)
T 2y0a_A           20 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG   99 (326)
T ss_dssp             ECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             eeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCC
Confidence            4567889999999999999999998743321     13457899999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC----ceEEecccC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL----SVKISLSGL  152 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~----~~ki~dfg~  152 (183)
                      +|.+++....               .+++..++.++.|++.||.|||+++++|+||||+||+++.++    .+||+|||+
T Consensus       100 ~L~~~l~~~~---------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A          100 ELFDFLAEKE---------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             BHHHHHTTSS---------------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             CHHHHHHhcC---------------CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence            9999986542               489999999999999999999999999999999999998776    899999999


Q ss_pred             CCCCCc----ccccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +.....    ....+++.|+|||++.+.+|+
T Consensus       165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  195 (326)
T 2y0a_A          165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG  195 (326)
T ss_dssp             CEECCTTSCCCCCCSCTTTCCHHHHTTCCCC
T ss_pred             CeECCCCCccccccCCcCcCCceeecCCCCC
Confidence            986543    245678999999999877663

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.98  E-value=2.1e-32  Score=207.58  Aligned_cols=163  Identities=18%  Similarity=0.231  Sum_probs=141.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.+|+||++.+..+++.||+|++....  .....+.+.+|..++..+ +||+|+++++++.+.+..+++|||+++++|
T Consensus        29 G~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L  108 (353)
T 2i0e_A           29 GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL  108 (353)
T ss_dssp             EEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcH
Confidence            44567899999999999999999987431  112234678899999988 899999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      .+++...+               .+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.... 
T Consensus       109 ~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~  173 (353)
T 2i0e_A          109 MYHIQQVG---------------RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW  173 (353)
T ss_dssp             HHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence            99998764               48999999999999999999999999999999999999999999999999998532 


Q ss_pred             ----cccccceeeeeecccCCCcccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ....++|+.|+|||++.+.+|+
T Consensus       174 ~~~~~~~~~gt~~y~aPE~~~~~~~~  199 (353)
T 2i0e_A          174 DGVTTKTFCGTPDYIAPEIIAYQPYG  199 (353)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHTTCCBS
T ss_pred             CCcccccccCCccccChhhhcCCCcC
Confidence                2356789999999999887764

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.98  E-value=6.5e-32  Score=211.25  Aligned_cols=161  Identities=24%  Similarity=0.389  Sum_probs=129.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC-----CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG-----DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~   75 (183)
                      |.-++|.||++.+..+++.||+|++.. ..+....+++.+|+.+++.++|+||+++++++...     ..++++||+++ 
T Consensus        62 G~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~-  140 (458)
T 3rp9_A           62 GTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD-  140 (458)
T ss_dssp             ------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS-
T ss_pred             eecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEeccc-
Confidence            556788999999999999999999874 34555667899999999999999999999999543     56899999986 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++....               .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+|+.
T Consensus       141 ~~L~~~~~~~~---------------~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~  205 (458)
T 3rp9_A          141 SDFKKLFRTPV---------------YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLART  205 (458)
T ss_dssp             EEHHHHHHSSC---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred             cchhhhcccCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchh
Confidence            89999886543               489999999999999999999999999999999999999999999999999985


Q ss_pred             CCc--------------------------------ccccceeeeeecccC-CCccc
Q psy2674         156 TYQ--------------------------------KEYYKYRWVICSNIA-EGRRL  178 (183)
Q Consensus       156 ~~~--------------------------------~~~~~~~~~~~pe~~-~~~~~  178 (183)
                      ...                                ..+++|++|+|||++ .+..|
T Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~  261 (458)
T 3rp9_A          206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENY  261 (458)
T ss_dssp             TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCC
T ss_pred             ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCC
Confidence            431                                235679999999975 44444

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.97  E-value=8.4e-33  Score=207.49  Aligned_cols=162  Identities=21%  Similarity=0.238  Sum_probs=138.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.+|.||++.+..+++.||+|++.........+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|.++
T Consensus        16 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (323)
T 3tki_A           16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR   95 (323)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGG
T ss_pred             ecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHH
Confidence            44567899999999999999999997555444456788999999999999999999999999999999999999999988


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +....               .+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.....   
T Consensus        96 l~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~  160 (323)
T 3tki_A           96 IEPDI---------------GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (323)
T ss_dssp             SBTTT---------------BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             HhhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence            85442               489999999999999999999999999999999999999999999999999975432   


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....+++.|+|||++.+..+
T Consensus       161 ~~~~~~~~gt~~y~aPE~~~~~~~  184 (323)
T 3tki_A          161 ERLLNKMCGTLPYVAPELLKRREF  184 (323)
T ss_dssp             ECCBCSCCSCGGGSCHHHHHCSSB
T ss_pred             ccccCCCccCcCccCcHHhccCCC
Confidence                24567999999999877655

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.97  E-value=1e-32  Score=208.02  Aligned_cols=162  Identities=17%  Similarity=0.260  Sum_probs=140.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|.||++.+..+++.||+|++....  .......+.+|+.+++.++||||+++++++.+++..+++|||+ +|+|.
T Consensus        18 G~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~   96 (336)
T 3h4j_B           18 GEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELF   96 (336)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHH
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHH
Confidence            44567899999999999999999986321  1111246889999999999999999999999999999999999 58999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+....               .+++..++.++.|++.|+.|||++|++||||||+||+++.++.+||+|||++......
T Consensus        97 ~~l~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~  161 (336)
T 3h4j_B           97 DYIVEKK---------------RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG  161 (336)
T ss_dssp             HHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred             HHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence            9887664               4899999999999999999999999999999999999999999999999999865443


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ..++++.|+|||++.+..|+
T Consensus       162 ~~~~~~~gt~~y~aPE~~~~~~~~  185 (336)
T 3h4j_B          162 NFLKTSCGSPNYAAPEVINGKLYA  185 (336)
T ss_dssp             BTTCCCTTSTTTSCGGGSCCSGGG
T ss_pred             cccccccCCcCcCCHHHHcCCCCC
Confidence                45678999999999987763

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.97  E-value=5.5e-32  Score=205.18  Aligned_cols=167  Identities=16%  Similarity=0.194  Sum_probs=139.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC----CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS----KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++.+..+++.||+|++...    ......+.+.+|+.+++.++||||+++++++.+++..+++|||+++++
T Consensus        33 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~  112 (351)
T 3c0i_A           33 GKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGAD  112 (351)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCB
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCC
Confidence            4457889999999999999999998522    111124578999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC---ceEEecccCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---SVKISLSGLSK  154 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~---~~ki~dfg~a~  154 (183)
                      |.+.+......           ...+++..++.++.|++.||.|||+++++||||||+||+++.++   .+||+|||++.
T Consensus       113 L~~~l~~~~~~-----------~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~  181 (351)
T 3c0i_A          113 LCFEIVKRADA-----------GFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAI  181 (351)
T ss_dssp             HHHHHHHHHHT-----------TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCE
T ss_pred             HHHHHHHhccc-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCccee
Confidence            98887654321           12478999999999999999999999999999999999997654   49999999997


Q ss_pred             CCCcc-----cccceeeeeecccCCCcccc
Q psy2674         155 DTYQK-----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       155 ~~~~~-----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .....     ...+|++|+|||++.+.+|+
T Consensus       182 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  211 (351)
T 3c0i_A          182 QLGESGLVAGGRVGTPHFMAPEVVKREPYG  211 (351)
T ss_dssp             ECCTTSCBCCCCCSCGGGCCHHHHTTCCBC
T ss_pred             EecCCCeeecCCcCCcCccCHHHHcCCCCC
Confidence            65432     45689999999999887663

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.97  E-value=5.7e-32  Score=206.55  Aligned_cols=163  Identities=16%  Similarity=0.213  Sum_probs=133.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHH-HhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDL-FCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~-l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.+++||++.+..+++.||+|++....  .......+.+|... ++.++||||+++++++.+++..+++|||+++++|
T Consensus        47 G~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L  126 (373)
T 2r5t_A           47 GKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL  126 (373)
T ss_dssp             ECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             eeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcH
Confidence            45678899999999999999999987432  23334466777776 4667999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC-
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY-  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~-  157 (183)
                      .+++....               .+++..++.++.|++.||+|||+++++||||||+||+++.++.+||+|||+++... 
T Consensus       127 ~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~  191 (373)
T 2r5t_A          127 FYHLQRER---------------CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE  191 (373)
T ss_dssp             HHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence            99998764               48899999999999999999999999999999999999999999999999997532 


Q ss_pred             ----cccccceeeeeecccCCCcccc
Q psy2674         158 ----QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ----~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ....++|+.|+|||++.+..|+
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~~~~~~  217 (373)
T 2r5t_A          192 HNSTTSTFCGTPEYLAPEVLHKQPYD  217 (373)
T ss_dssp             CCCCCCSBSCCCCCCCHHHHTTCCCC
T ss_pred             CCCccccccCCccccCHHHhCCCCCC
Confidence                2356789999999999887764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.97  E-value=6.9e-32  Score=202.63  Aligned_cols=163  Identities=22%  Similarity=0.270  Sum_probs=138.4

Q ss_pred             CCCCCceeeeccCCCCcc---eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTS---VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++....++.   .||+|.+.........+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|
T Consensus        58 G~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  137 (325)
T 3kul_A           58 GSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL  137 (325)
T ss_dssp             EETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBH
T ss_pred             EeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcH
Confidence            445678888888775444   59999998776777777899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++.....
T Consensus       138 ~~~l~~~~~--------------~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  203 (325)
T 3kul_A          138 DTFLRTHDG--------------QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED  203 (325)
T ss_dssp             HHHHHTTTT--------------CSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred             HHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence            999965432              588999999999999999999999999999999999999999999999999986543


Q ss_pred             cc--------ccceeeeeecccCCCccc
Q psy2674         159 KE--------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~--------~~~~~~~~~pe~~~~~~~  178 (183)
                      ..        ..++..|+|||++.+..+
T Consensus       204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~  231 (325)
T 3kul_A          204 DPDAAYTTTGGKIPIRWTAPEAIAFRTF  231 (325)
T ss_dssp             ---CCEECC---CCGGGSCHHHHHHCEE
T ss_pred             CccceeeccCCCCcccccCHhHhcCCCC
Confidence            21        123557999999877655

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.97  E-value=3.1e-32  Score=208.33  Aligned_cols=163  Identities=23%  Similarity=0.337  Sum_probs=141.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.+|.||++....++..||+|.+.........+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.++
T Consensus       123 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~  202 (377)
T 3cbl_A          123 GRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTF  202 (377)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             ccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHH
Confidence            34567889999999999999999998666666667889999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +...+.              .+++..++.++.|++.|+.|||+++++||||||+||+++.++.+||+|||+++...... 
T Consensus       203 l~~~~~--------------~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~  268 (377)
T 3cbl_A          203 LRTEGA--------------RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY  268 (377)
T ss_dssp             HHHHGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence            987543              48899999999999999999999999999999999999999999999999998544332 


Q ss_pred             ------ccceeeeeecccCCCccc
Q psy2674         161 ------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 ------~~~~~~~~~pe~~~~~~~  178 (183)
                            ..++..|+|||++.+..|
T Consensus       269 ~~~~~~~~~~~~y~aPE~~~~~~~  292 (377)
T 3cbl_A          269 AASGGLRQVPVKWTAPEALNYGRY  292 (377)
T ss_dssp             ECCSSCCEEEGGGSCHHHHHHCEE
T ss_pred             eecCCCCCCCcCcCCHhHhccCCC
Confidence                  123556999999876554

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.97  E-value=9.7e-33  Score=213.15  Aligned_cols=159  Identities=15%  Similarity=0.137  Sum_probs=138.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-+++.||++.+..+++.||+|++.+...  ....+.+.+|..++..++|+||+++++++.+++..+++|||+++++|.
T Consensus        70 G~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~  149 (412)
T 2vd5_A           70 GRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLL  149 (412)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHH
Confidence            445788999999999999999999864211  112235788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++...+.              .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||++......
T Consensus       150 ~~l~~~~~--------------~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~  215 (412)
T 2vd5_A          150 TLLSKFGE--------------RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD  215 (412)
T ss_dssp             HHHHHHSS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             HHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence            99987642              5899999999999999999999999999999999999999999999999999755432


Q ss_pred             ------cccceeeeeecccCC
Q psy2674         160 ------EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~  174 (183)
                            ..++|+.|+|||++.
T Consensus       216 ~~~~~~~~~Gt~~Y~APE~l~  236 (412)
T 2vd5_A          216 GTVRSLVAVGTPDYLSPEILQ  236 (412)
T ss_dssp             SCEECSSCCSCGGGCCHHHHH
T ss_pred             CccccceeccccCcCCHHHHh
Confidence                  347899999999986

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=6.2e-33  Score=214.12  Aligned_cols=160  Identities=18%  Similarity=0.169  Sum_probs=138.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-++|.||++.+..+++.||+|++.....  ....+.+.+|+.+++.++||||+++++++.+++..+++|||+++|+|.
T Consensus        78 G~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~  157 (410)
T 3v8s_A           78 GRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV  157 (410)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred             EcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence            456789999999999999999999863210  001224778999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++...                .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+|......
T Consensus       158 ~~l~~~----------------~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~  221 (410)
T 3v8s_A          158 NLMSNY----------------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE  221 (410)
T ss_dssp             HHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             HHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence            998654                4889999999999999999999999999999999999999999999999999755432


Q ss_pred             ------cccceeeeeecccCCCcc
Q psy2674         160 ------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~~~~  177 (183)
                            ..++|+.|+|||++.+.+
T Consensus       222 ~~~~~~~~~gt~~Y~APE~l~~~~  245 (410)
T 3v8s_A          222 GMVRCDTAVGTPDYISPEVLKSQG  245 (410)
T ss_dssp             SEEECCSCCSCGGGCCHHHHHTTT
T ss_pred             CcccccCCcCCccccCHHHhhccC
Confidence                  467899999999987654

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=204.80  Aligned_cols=162  Identities=19%  Similarity=0.247  Sum_probs=137.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.+|.||++.+..++..||+|++.... ....+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.+.
T Consensus        98 G~G~~g~Vy~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~  176 (373)
T 2x4f_A           98 GGGRFGQVHKCEETATGLKLAAKIIKTRG-MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDR  176 (373)
T ss_dssp             C-----CEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHH
T ss_pred             ecCcCEEEEEEEEcCCCcEEEEEEEcccc-cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHH
Confidence            55677899999999999999999987543 34456889999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe--ccCCceEEecccCCCCCCcc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI--SSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~--~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.....              .+++..++.++.|++.||.|||+++++||||||+||++  +.++.+||+|||++......
T Consensus       177 l~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~  242 (373)
T 2x4f_A          177 IIDESY--------------NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR  242 (373)
T ss_dssp             HHHTGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc
Confidence            876532              58899999999999999999999999999999999999  56789999999999865443


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...+|++|+|||++.+..+
T Consensus       243 ~~~~~~~gt~~y~aPE~~~~~~~  265 (373)
T 2x4f_A          243 EKLKVNFGTPEFLAPEVVNYDFV  265 (373)
T ss_dssp             CBCCCCCSSCTTCCHHHHTTCBC
T ss_pred             cccccccCCCcEeChhhccCCCC
Confidence                3457899999999987655

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=9.9e-32  Score=198.76  Aligned_cols=161  Identities=19%  Similarity=0.299  Sum_probs=138.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++... ........+.+|+.+++.++||||+++++++.+++..+++|||++ +++.+
T Consensus        11 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~   89 (292)
T 3o0g_A           11 GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKK   89 (292)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHH
T ss_pred             cCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCC-CCHHH
Confidence            4457889999999999999999999743 334445678899999999999999999999999999999999998 57776


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      .+.....              .+++..++.++.|++.|+.|||++|++||||||+||+++.++.+||+|||++.....  
T Consensus        90 ~~~~~~~--------------~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~  155 (292)
T 3o0g_A           90 YFDSCNG--------------DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             HHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC
T ss_pred             HHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc
Confidence            6655332              589999999999999999999999999999999999999999999999999975432  


Q ss_pred             ---ccccceeeeeecccCCCcc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~  177 (183)
                         ....+|++|+|||++.+..
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~~  177 (292)
T 3o0g_A          156 RCYSAEVVTLWYRPPDVLFGAK  177 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHHTTCS
T ss_pred             ccccCCccccCCcChHHHcCCC
Confidence               2456689999999987754

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.97  E-value=1.1e-32  Score=214.22  Aligned_cols=159  Identities=16%  Similarity=0.152  Sum_probs=137.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH--HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD--EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-++|.||++.+..+++.||+|++......  .....+.+|..++..++||||+++++++.+++..+++|||+++|+|.
T Consensus        83 G~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~  162 (437)
T 4aw2_A           83 GRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLL  162 (437)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred             EeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHH
Confidence            4567899999999999999999998632111  11224788999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+|......
T Consensus       163 ~~l~~~~~--------------~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~  228 (437)
T 4aw2_A          163 TLLSKFED--------------RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED  228 (437)
T ss_dssp             HHHHTTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             HHHHHccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence            99976422              5899999999999999999999999999999999999999999999999999754332


Q ss_pred             ------cccceeeeeecccCC
Q psy2674         160 ------EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~  174 (183)
                            ..++|++|+|||++.
T Consensus       229 ~~~~~~~~~GT~~Y~APE~l~  249 (437)
T 4aw2_A          229 GTVQSSVAVGTPDYISPEILQ  249 (437)
T ss_dssp             SCEECCSCCSCGGGCCHHHHH
T ss_pred             CCcccccccCCcCeeChHHHh
Confidence                  357899999999986

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.9e-31  Score=204.60  Aligned_cols=158  Identities=22%  Similarity=0.384  Sum_probs=131.2

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCC--ccEEEEeeCCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGD--PHYLLLEYTDWG   76 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~--~~~lv~e~~~~~   76 (183)
                      +|.-++|.||++.+..+++.||+|++.. .........+.+|+.+++.+. ||||+++++++..++  .++++|||++ +
T Consensus        17 lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~   95 (388)
T 3oz6_A           17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-T   95 (388)
T ss_dssp             -------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-E
T ss_pred             eeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-c
Confidence            3556788999999999999999999863 345556668889999999996 999999999997544  6899999998 7


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+.+...                .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+|+..
T Consensus        96 ~L~~~~~~~----------------~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  159 (388)
T 3oz6_A           96 DLHAVIRAN----------------ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSF  159 (388)
T ss_dssp             EHHHHHHHT----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEES
T ss_pred             CHHHHHHcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccc
Confidence            999988653                4889999999999999999999999999999999999999999999999999743


Q ss_pred             Cc--------------------------ccccceeeeeecccCCC
Q psy2674         157 YQ--------------------------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       157 ~~--------------------------~~~~~~~~~~~pe~~~~  175 (183)
                      ..                          ..+.+|++|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  204 (388)
T 3oz6_A          160 VNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG  204 (388)
T ss_dssp             SSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT
T ss_pred             cccccccccccccccccccccccccccccCCcccCCcCCHHHhcC
Confidence            21                          23578999999999876

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.97  E-value=1.3e-32  Score=219.93  Aligned_cols=148  Identities=11%  Similarity=0.119  Sum_probs=123.1

Q ss_pred             eccCCCCcceEEEeeccCCC---------CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674          11 KASDPQDTSVLMAKSLVHSK---------DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus        11 ~~~~~~~~~~vavK~~~~~~---------~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      .++..-.|+.+++|.+....         .....+++.+|+++|+.+ .|+||+++++++++++..||||||++|++|.+
T Consensus       252 ~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d  331 (569)
T 4azs_A          252 RSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSD  331 (569)
T ss_dssp             CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHH
T ss_pred             ccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHH
Confidence            33444578999999986431         123456799999999999 79999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      .+...+               .+++.   .++.||+.||.|+|++||+||||||.|||++.++.+||+|||+|+....+ 
T Consensus       332 ~i~~~~---------------~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~  393 (569)
T 4azs_A          332 MLAAGE---------------EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC  393 (569)
T ss_dssp             HHHTTC---------------CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred             HHHhCC---------------CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence            998764               35544   47899999999999999999999999999999999999999999865443 


Q ss_pred             ----cccceeeeeecccCCCc
Q psy2674         160 ----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~  176 (183)
                          ..++|++|++||++.|+
T Consensus       394 ~~~~t~vGTp~YmAPE~l~g~  414 (569)
T 4azs_A          394 SWPTNLVQSFFVFVNELFAEN  414 (569)
T ss_dssp             CCSHHHHHHHHHHHHHHC---
T ss_pred             ccccCceechhhccHHHhCCC
Confidence                45789999999999885

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=1.5e-31  Score=205.26  Aligned_cols=158  Identities=13%  Similarity=0.103  Sum_probs=138.8

Q ss_pred             CCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHH
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL   83 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   83 (183)
                      .++.||++.+..+++.||+|++... ......+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|.+++.
T Consensus        39 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  118 (389)
T 3gni_B           39 DLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLIC  118 (389)
T ss_dssp             TTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHH
T ss_pred             CceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHh
Confidence            6788999999999999999999743 345566788899999999999999999999999999999999999999999997


Q ss_pred             hhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-----
Q psy2674          84 ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-----  158 (183)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-----  158 (183)
                      ....             ..+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||.+.....     
T Consensus       119 ~~~~-------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~  185 (389)
T 3gni_B          119 THFM-------------DGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ  185 (389)
T ss_dssp             HTCT-------------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEEC
T ss_pred             hhcc-------------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccc
Confidence            7522             2589999999999999999999999999999999999999999999999998763321     


Q ss_pred             -------ccccceeeeeecccCCC
Q psy2674         159 -------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 -------~~~~~~~~~~~pe~~~~  175 (183)
                             ....++..|+|||++.+
T Consensus       186 ~~~~~~~~~~~gt~~y~aPE~~~~  209 (389)
T 3gni_B          186 RVVHDFPKYSVKVLPWLSPEVLQQ  209 (389)
T ss_dssp             SCBCCCCTTCTTTGGGSCHHHHST
T ss_pred             cccccccccccccccccCHHHHhc
Confidence                   12366888999999887

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.97  E-value=2.5e-32  Score=214.25  Aligned_cols=162  Identities=17%  Similarity=0.263  Sum_probs=141.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|.||++.+..+|+.||+|++....  .....+.+.+|+.+++.++||||+++++++.+++..++++||+++++|.
T Consensus        25 G~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~  104 (476)
T 2y94_A           25 GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELF  104 (476)
T ss_dssp             ECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHH
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence            55678899999999999999999986331  1122457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++...+               .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++......
T Consensus       105 ~~l~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~  169 (476)
T 2y94_A          105 DYICKNG---------------RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  169 (476)
T ss_dssp             HHTTSSS---------------SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence            9986543               4899999999999999999999999999999999999999999999999999865443


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ..+++++|+|||++.+..|
T Consensus       170 ~~~~~~~gt~~y~aPE~~~~~~~  192 (476)
T 2y94_A          170 EFLRTSCGSPNYAAPEVISGRLY  192 (476)
T ss_dssp             CCBCCCCSCSTTCCHHHHTTCCB
T ss_pred             ccccccCCCcCeEChhhccCCCC
Confidence                4567999999999988765

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=1.3e-31  Score=208.24  Aligned_cols=161  Identities=22%  Similarity=0.341  Sum_probs=137.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC-----CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG-----DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~   75 (183)
                      |.-++|.||++.+..+++.||+|++... .+....+++.+|+.+++.++|+||+++++++...     ...+++||+++ 
T Consensus        35 G~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-  113 (432)
T 3n9x_A           35 GRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-  113 (432)
T ss_dssp             EEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-
T ss_pred             eecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-
Confidence            4456789999999999999999999743 4555667899999999999999999999999765     56899999988 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+....               .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+|+.
T Consensus       114 ~~L~~~~~~~~---------------~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~  178 (432)
T 3n9x_A          114 SDLKKLFKTPI---------------FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLART  178 (432)
T ss_dssp             EEHHHHHHSSC---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             cCHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence            79999987542               489999999999999999999999999999999999999999999999999985


Q ss_pred             CCc---------------------------ccccceeeeeecccC-CCccc
Q psy2674         156 TYQ---------------------------KEYYKYRWVICSNIA-EGRRL  178 (183)
Q Consensus       156 ~~~---------------------------~~~~~~~~~~~pe~~-~~~~~  178 (183)
                      ...                           ..+.+|+||+|||++ .+..|
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~  229 (432)
T 3n9x_A          179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY  229 (432)
T ss_dssp             C-------------------------------CCCCCTTCCHHHHTTCSCC
T ss_pred             ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCC
Confidence            432                           346779999999985 44434

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.97  E-value=1.5e-31  Score=203.55  Aligned_cols=161  Identities=17%  Similarity=0.165  Sum_probs=134.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.+|.||++.+..+++.||+|++......  .+.+.+|+..++.++||||+++++++.+++..+++|||+++++|.++
T Consensus        29 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~  106 (361)
T 3uc3_A           29 GSGNFGVARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYER  106 (361)
T ss_dssp             SSSTTSSEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             ccCCCEEEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHH
Confidence            5667889999999999999999999744322  23678999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc--eEEecccCCCCCCc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--VKISLSGLSKDTYQ-  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~--~ki~dfg~a~~~~~-  158 (183)
                      +...+               .+++..++.++.|++.||.|||++|++||||||+||+++.++.  +||+|||++..... 
T Consensus       107 l~~~~---------------~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~  171 (361)
T 3uc3_A          107 ICNAG---------------RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH  171 (361)
T ss_dssp             HHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred             HHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence            97764               4899999999999999999999999999999999999986655  99999999874322 


Q ss_pred             ---ccccceeeeeecccCCCcccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~~  179 (183)
                         ....+|++|+|||++.+..++
T Consensus       172 ~~~~~~~gt~~y~aPE~~~~~~~~  195 (361)
T 3uc3_A          172 SQPKSTVGTPAYIAPEVLLRQEYD  195 (361)
T ss_dssp             ---------CTTSCHHHHHCSSCC
T ss_pred             CCCCCCcCCCCcCChhhhcCCCCC
Confidence               346789999999998776653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.97  E-value=1.3e-31  Score=200.81  Aligned_cols=161  Identities=18%  Similarity=0.207  Sum_probs=140.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |...+|.||++.+..+|+.||+|++...... ..+.+.+|+.+++.++||||+++++++..++..+++|||+++++|.++
T Consensus        54 g~G~~g~V~~a~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~  132 (321)
T 2c30_A           54 GEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ-RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDI  132 (321)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEETTTCC-SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHH
T ss_pred             ccCCCeEEEEEEECCCCcEEEEEEEeccchh-HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHH
Confidence            3456788999999999999999998744332 234688999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +...                .+++..++.++.|++.|+.|||+++++||||||+||+++.++.++|+|||++.....   
T Consensus       133 l~~~----------------~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~  196 (321)
T 2c30_A          133 VSQV----------------RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP  196 (321)
T ss_dssp             HTTC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC
T ss_pred             HHhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc
Confidence            8543                488999999999999999999999999999999999999999999999999875433   


Q ss_pred             --ccccceeeeeecccCCCcccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ....+|+.|+|||++.+..++
T Consensus       197 ~~~~~~gt~~y~aPE~~~~~~~~  219 (321)
T 2c30_A          197 KRKSLVGTPYWMAPEVISRSLYA  219 (321)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             ccccccCCccccCHhhhcCCCCC
Confidence              345778999999999876653

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.97  E-value=2e-31  Score=203.23  Aligned_cols=171  Identities=24%  Similarity=0.333  Sum_probs=139.9

Q ss_pred             CCCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           1 MSLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         1 ~~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      +|.-++|.||++.     +..+++.||+|.+...........+.+|+.+++.++||||+++++++.+++..+++|||+++
T Consensus        79 LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~  158 (367)
T 3l9p_A           79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAG  158 (367)
T ss_dssp             CCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCC
Confidence            3556778888887     66788999999998666666677899999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC---CceEEecccC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---LSVKISLSGL  152 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~---~~~ki~dfg~  152 (183)
                      ++|.+++.......        .....+++..++.++.|++.||.|||+++++||||||+|||++.+   ..+||+|||+
T Consensus       159 g~L~~~l~~~~~~~--------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~  230 (367)
T 3l9p_A          159 GDLKSFLRETRPRP--------SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGM  230 (367)
T ss_dssp             EEHHHHHHHHSCCS--------SSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHH
T ss_pred             CCHHHHHHhhcccc--------CccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcc
Confidence            99999998764311        111258889999999999999999999999999999999999844   4599999999


Q ss_pred             CCCCC-------cccccceeeeeecccCCCcccc
Q psy2674         153 SKDTY-------QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~-------~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++...       .....+++.|+|||++.+..|+
T Consensus       231 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  264 (367)
T 3l9p_A          231 ARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFT  264 (367)
T ss_dssp             HHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCC
T ss_pred             ccccccccccccCCCcCCcccEECHHHhcCCCCC
Confidence            87321       2234567899999998766553

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.97  E-value=1.1e-31  Score=201.63  Aligned_cols=163  Identities=18%  Similarity=0.256  Sum_probs=131.3

Q ss_pred             CCCCCceeeeccCC---CCcceEEEeeccCCC---CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDP---QDTSVLMAKSLVHSK---DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~---~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |.-.+|.||++...   .+++.||+|++....   .......+.+|+.+++.++||||+++++++.+++..+++|||+++
T Consensus        26 G~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~  105 (327)
T 3a62_A           26 GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSG  105 (327)
T ss_dssp             EEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTT
T ss_pred             EeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCC
Confidence            33467788877764   789999999987542   233445678999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++....               .+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++..
T Consensus       106 ~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~  170 (327)
T 3a62_A          106 GELFMQLEREG---------------IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE  170 (327)
T ss_dssp             EEHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred             CcHHHHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence            99999997764               488999999999999999999999999999999999999999999999999875


Q ss_pred             CCc-----ccccceeeeeecccCCCcccc
Q psy2674         156 TYQ-----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       156 ~~~-----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...     ....+++.|+|||++.+..++
T Consensus       171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  199 (327)
T 3a62_A          171 SIHDGTVTHTFCGTIEYMAPEILMRSGHN  199 (327)
T ss_dssp             --------CTTSSCCTTSCHHHHTTSCCC
T ss_pred             cccCCccccccCCCcCccCHhhCcCCCCC
Confidence            432     245679999999999876653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.97  E-value=1.9e-31  Score=203.78  Aligned_cols=164  Identities=22%  Similarity=0.292  Sum_probs=132.8

Q ss_pred             CCCCCceeeeccCC---CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDP---QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++...   .++..||+|.+.........+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|
T Consensus        54 G~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL  133 (373)
T 2qol_A           54 GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL  133 (373)
T ss_dssp             EECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             eeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcH
Confidence            34567889988776   578889999998766677777899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+++....
T Consensus       134 ~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  199 (373)
T 2qol_A          134 DSFLRKHDA--------------QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLED  199 (373)
T ss_dssp             HHHHHTTTT--------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             HHHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCcccccccc
Confidence            999976532              588999999999999999999999999999999999999999999999999986543


Q ss_pred             cc--------ccceeeeeecccCCCcccc
Q psy2674         159 KE--------YYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ~~--------~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..        ..++..|+|||++.+..++
T Consensus       200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  228 (373)
T 2qol_A          200 DPEAAYTTRGGKIPIRWTSPEAIAYRKFT  228 (373)
T ss_dssp             --------------CTTSCHHHHHHCCCC
T ss_pred             CCccceeccCCCcCCCccChhhhccCCcC
Confidence            21        1224579999998776553

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.97  E-value=3.1e-32  Score=212.50  Aligned_cols=163  Identities=15%  Similarity=0.190  Sum_probs=133.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++...  ........+.+|+.+++.++||||+++++++.+.+..+++|||+++++|.
T Consensus       157 G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~  236 (446)
T 4ejn_A          157 GKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELF  236 (446)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHH
T ss_pred             eeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHH
Confidence            3456788999999999999999998732  23334457789999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      +++....               .+++..++.++.|++.||.|||+ .|++||||||+|||++.++.+||+|||+|.....
T Consensus       237 ~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  301 (446)
T 4ejn_A          237 FHLSRER---------------VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK  301 (446)
T ss_dssp             HHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence            9997764               48999999999999999999998 9999999999999999999999999999985432


Q ss_pred             -----ccccceeeeeecccCCCcccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                           ....+|++|+|||++.+..|+
T Consensus       302 ~~~~~~~~~gt~~y~aPE~~~~~~~~  327 (446)
T 4ejn_A          302 DGATMKTFCGTPEYLAPEVLEDNDYG  327 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTSCCC
T ss_pred             CCcccccccCCccccCHhhcCCCCCC
Confidence                 246789999999999887664

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=1.8e-31  Score=199.74  Aligned_cols=165  Identities=19%  Similarity=0.287  Sum_probs=136.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.||+|.+.........+.+.+|+++++.++||||+++++++.+++..+++|||++ ++|.++
T Consensus        14 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~   92 (317)
T 2pmi_A           14 GNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKY   92 (317)
T ss_dssp             -----CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHH
T ss_pred             CCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHH
Confidence            5567889999999999999999998754433334578899999999999999999999999999999999998 799999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.......         ....+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++.....   
T Consensus        93 l~~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~  163 (317)
T 2pmi_A           93 MDSRTVGN---------TPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN  163 (317)
T ss_dssp             HHHHHSSS---------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC
T ss_pred             HHhccccc---------cccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc
Confidence            87653210         112488999999999999999999999999999999999999999999999999975432   


Q ss_pred             --ccccceeeeeecccCCCc
Q psy2674         159 --KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~  176 (183)
                        ....++++|+|||++.+.
T Consensus       164 ~~~~~~~t~~y~aPE~~~~~  183 (317)
T 2pmi_A          164 TFSSEVVTLWYRAPDVLMGS  183 (317)
T ss_dssp             CCCCCCSCCTTCCHHHHTTC
T ss_pred             cCCCCcccccccCchHhhCC
Confidence              245678999999998763

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.97  E-value=6e-32  Score=201.68  Aligned_cols=163  Identities=19%  Similarity=0.283  Sum_probs=136.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCcc----EEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH----YLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~----~lv~e~~~~   75 (183)
                      |.-.++.||++.+..+++.||+|++...  .+......+.+|++.++.++||||+++++++......    +++|||+++
T Consensus        21 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g  100 (311)
T 3ork_A           21 GFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDG  100 (311)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCE
T ss_pred             ccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCC
Confidence            4456789999999999999999999743  3455667889999999999999999999999876544    999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++....               .+++..++.++.|++.+|.|||+++++|+||||+||+++.++.+||+|||++..
T Consensus       101 ~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~  165 (311)
T 3ork_A          101 VTLRDIVHTEG---------------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA  165 (311)
T ss_dssp             EEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred             CCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence            99999997664               489999999999999999999999999999999999999999999999999975


Q ss_pred             CCcc--------cccceeeeeecccCCCcccc
Q psy2674         156 TYQK--------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       156 ~~~~--------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ....        ...+++.|+|||++.+..++
T Consensus       166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  197 (311)
T 3ork_A          166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVD  197 (311)
T ss_dssp             ----------------CCTTCCHHHHHTCCCC
T ss_pred             ccccccccccccccCcCcccCCHHHhcCCCCC
Confidence            4332        34578999999999887654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.97  E-value=2.3e-31  Score=199.85  Aligned_cols=159  Identities=15%  Similarity=0.201  Sum_probs=123.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.+|.||++.+..+++.||+|++...    ....+.+|+..++.+. ||||+++++++.+++..+++|||+++++|.+
T Consensus        20 G~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~   95 (325)
T 3kn6_A           20 GEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE   95 (325)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence            4457889999999999999999998643    2346788999999995 9999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC---ceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---SVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~---~~ki~dfg~a~~~~  157 (183)
                      ++....               .+++..++.++.|++.|+.|||+++++||||||+||+++.++   .++|+|||++....
T Consensus        96 ~l~~~~---------------~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~  160 (325)
T 3kn6_A           96 RIKKKK---------------HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP  160 (325)
T ss_dssp             HHHHCS---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred             HHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence            997653               489999999999999999999999999999999999997655   89999999997543


Q ss_pred             c-----ccccceeeeeecccCCCcccc
Q psy2674         158 Q-----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~-----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .     ....++++|+|||++.+.+|+
T Consensus       161 ~~~~~~~~~~~t~~y~aPE~~~~~~~~  187 (325)
T 3kn6_A          161 PDNQPLKTPCFTLHYAAPELLNQNGYD  187 (325)
T ss_dssp             C----------------------CCCC
T ss_pred             CCCCcccccCCCcCccCHHHhcCCCCC
Confidence            3     245568999999999887764

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.97  E-value=1.1e-31  Score=210.32  Aligned_cols=160  Identities=20%  Similarity=0.308  Sum_probs=132.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~   74 (183)
                      |.-++|.||++.+..+++.||+|++... ......+++.+|+.+++.++||||+++++++..++      ..+++|||++
T Consensus        71 G~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~  150 (464)
T 3ttj_A           71 GSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD  150 (464)
T ss_dssp             EECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCS
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCC
Confidence            4567889999999999999999999743 34555678899999999999999999999997654      4599999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       ++|.+.+..                 .+++..++.++.|++.||.|||++|++||||||+|||++.++.+||+|||+|+
T Consensus       151 -~~l~~~~~~-----------------~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~  212 (464)
T 3ttj_A          151 -ANLCQVIQM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  212 (464)
T ss_dssp             -EEHHHHHTS-----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred             -CCHHHHHhh-----------------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence             567666632                 38899999999999999999999999999999999999999999999999998


Q ss_pred             CCCc----ccccceeeeeecccCCCcccc
Q psy2674         155 DTYQ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       155 ~~~~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ....    ....+|++|+|||++.+.+|+
T Consensus       213 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  241 (464)
T 3ttj_A          213 TAGTSFMMTPYVVTRYYRAPEVILGMGYK  241 (464)
T ss_dssp             ----CCCC----CCCTTCCHHHHTTCCCC
T ss_pred             ecCCCcccCCCcccccccCHHHHcCCCCC
Confidence            6544    346789999999999987775

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=7.7e-32  Score=214.01  Aligned_cols=167  Identities=16%  Similarity=0.222  Sum_probs=143.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|+||++.+..+++.||+|++.....  ....+.+.+|+++++.++||||+++++++.+++..+++|||++|++|.
T Consensus       194 G~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~  273 (543)
T 3c4z_A          194 GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIR  273 (543)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred             eeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHH
Confidence            445788999999999999999999863321  112346889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++.....           ....+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++..... 
T Consensus       274 ~~l~~~~~-----------~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~  342 (543)
T 3c4z_A          274 YHIYNVDE-----------DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG  342 (543)
T ss_dssp             HHHHTSST-----------TSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             HHHHHhhc-----------ccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCC
Confidence            99876532           113589999999999999999999999999999999999999999999999999975433 


Q ss_pred             ----ccccceeeeeecccCCCcccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ....+|+.|+|||++.+..|+
T Consensus       343 ~~~~~~~~GT~~Y~APE~l~~~~~~  367 (543)
T 3c4z_A          343 QTKTKGYAGTPGFMAPELLLGEEYD  367 (543)
T ss_dssp             CCCBCCCCSCTTTSCHHHHTTCCBC
T ss_pred             CcccccccCCccccChhhhcCCCCC
Confidence                235789999999999987764

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=6.1e-32  Score=215.41  Aligned_cols=165  Identities=18%  Similarity=0.200  Sum_probs=142.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|.||.+.+..+++.||+|++....  .......+.+|+++++.++||||+++++++.+.+..+++|||++|++|.
T Consensus       193 G~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~  272 (576)
T 2acx_A          193 GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLK  272 (576)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHH
Confidence            44567899999999999999999986321  1112346789999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++...+.             ..+++..++.++.|++.||.|||+++|+||||||+||+++.++.+||+|||++..... 
T Consensus       273 ~~l~~~~~-------------~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~  339 (576)
T 2acx_A          273 FHIYHMGQ-------------AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG  339 (576)
T ss_dssp             HHHHSSSS-------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred             HHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence            99876532             2489999999999999999999999999999999999999999999999999986543 


Q ss_pred             ---ccccceeeeeecccCCCcccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~~  179 (183)
                         ....+|+.|+|||++.+.+|+
T Consensus       340 ~~~~~~~GT~~Y~APEvl~~~~~~  363 (576)
T 2acx_A          340 QTIKGRVGTVGYMAPEVVKNERYT  363 (576)
T ss_dssp             CCEECCCSCGGGCCHHHHTTCEES
T ss_pred             ccccccCCCccccCHHHHcCCCCC
Confidence               245789999999999887664

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=3.1e-31  Score=202.18  Aligned_cols=157  Identities=20%  Similarity=0.308  Sum_probs=133.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~   74 (183)
                      |.-++|.||++.+..+|+.||+|++.. .......+++.+|+++++.++||||+++++++..++      .++++|||+ 
T Consensus        34 G~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-  112 (367)
T 1cm8_A           34 GSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-  112 (367)
T ss_dssp             ------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-
T ss_pred             eecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-
Confidence            556778899999999999999999864 344555678899999999999999999999998653      459999999 


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+++...                .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++
T Consensus       113 ~~~L~~~~~~~----------------~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~  176 (367)
T 1cm8_A          113 GTDLGKLMKHE----------------KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR  176 (367)
T ss_dssp             SEEHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred             CCCHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence            58999998753                48899999999999999999999999999999999999999999999999998


Q ss_pred             CCCc--ccccceeeeeecccCCC
Q psy2674         155 DTYQ--KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~--~~~~~~~~~~~pe~~~~  175 (183)
                      ....  ....+|++|+|||++.+
T Consensus       177 ~~~~~~~~~~~t~~y~aPE~~~~  199 (367)
T 1cm8_A          177 QADSEMTGYVVTRWYRAPEVILN  199 (367)
T ss_dssp             ECCSSCCSSCSCGGGCCTHHHHT
T ss_pred             ccccccCcCcCCCCcCCHHHHhC
Confidence            6543  35678999999999866

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=2.2e-31  Score=204.21  Aligned_cols=163  Identities=19%  Similarity=0.216  Sum_probs=140.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.+|.||++.+..+++.+|+|++.... ......+.+|+.+++.++||||+++++++.+++..+++|||+++++|.++
T Consensus        60 G~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~  138 (387)
T 1kob_A           60 GSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDR  138 (387)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHH
T ss_pred             ecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHH
Confidence            34567899999999999999999987443 33445789999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec--cCCceEEecccCCCCCCcc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS--SDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~--~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.....              .+++..++.++.|++.||.|||+++++||||||+||+++  ..+.+||+|||++......
T Consensus       139 l~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~  204 (387)
T 1kob_A          139 IAAEDY--------------KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  204 (387)
T ss_dssp             TTCTTC--------------CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             HHhhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence            865432              588999999999999999999999999999999999997  4578999999999865543


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...+|+.|+|||++.+.+++
T Consensus       205 ~~~~~~~gt~~y~aPE~~~~~~~~  228 (387)
T 1kob_A          205 EIVKVTTATAEFAAPEIVDREPVG  228 (387)
T ss_dssp             SCEEEECSSGGGCCHHHHTTCCBC
T ss_pred             cceeeeccCCCccCchhccCCCCC
Confidence                34678999999999887664

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.97  E-value=5.6e-31  Score=199.46  Aligned_cols=158  Identities=19%  Similarity=0.273  Sum_probs=138.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++...  ......+.+.+|+++++.++||||+++++++.+++..+++|||+. |+|.
T Consensus        63 G~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~-g~l~  141 (348)
T 1u5q_A           63 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-GSAS  141 (348)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS-EEHH
T ss_pred             ccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC-CCHH
Confidence            4456789999999999999999998743  234455678999999999999999999999999999999999998 7888


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +.+.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++..... 
T Consensus       142 ~~l~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~  207 (348)
T 1u5q_A          142 DLLEVHKK--------------PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  207 (348)
T ss_dssp             HHHHHHTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred             HHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence            88865432              589999999999999999999999999999999999999999999999999986544 


Q ss_pred             ccccceeeeeecccCC
Q psy2674         159 KEYYKYRWVICSNIAE  174 (183)
Q Consensus       159 ~~~~~~~~~~~pe~~~  174 (183)
                      ....++++|+|||++.
T Consensus       208 ~~~~gt~~y~aPE~~~  223 (348)
T 1u5q_A          208 NSFVGTPYWMAPEVIL  223 (348)
T ss_dssp             CCCCSCGGGCCHHHHH
T ss_pred             CcccCCcceeCHhhhc
Confidence            4567899999999974

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=2.2e-31  Score=201.99  Aligned_cols=178  Identities=21%  Similarity=0.350  Sum_probs=141.8

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCC-ccEEEEeeCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD-PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~~lv~e~~~   74 (183)
                      |.-.++.||++.     +..+++.||+|.+.........+.+.+|+++++.+ +||||+++++++.+++ ..+++|||++
T Consensus        31 G~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~  110 (359)
T 3vhe_A           31 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK  110 (359)
T ss_dssp             EECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCT
T ss_pred             cCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecC
Confidence            445677888887     78889999999998777777777899999999999 8999999999998755 4899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCC---------------------------------------------------CCCCCCCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSG---------------------------------------------------SGKPRVRSL  103 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~---------------------------------------------------~~~~~~~~~  103 (183)
                      +++|.+++............                                                   ........+
T Consensus       111 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  190 (359)
T 3vhe_A          111 FGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFL  190 (359)
T ss_dssp             TEEHHHHHHTTTTSBCSCC------------------------------------------------------CTTTTCB
T ss_pred             CCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccchhcccc
Confidence            99999999875421000000                                                   000112238


Q ss_pred             CHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-------cccceeeeeecccCCCc
Q psy2674         104 STSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       104 ~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~  176 (183)
                      ++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||++......       ...++..|+|||++.+.
T Consensus       191 ~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~  270 (359)
T 3vhe_A          191 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR  270 (359)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCC
Confidence            88999999999999999999999999999999999999999999999999855332       23456789999998776


Q ss_pred             ccc
Q psy2674         177 RLN  179 (183)
Q Consensus       177 ~~~  179 (183)
                      .|+
T Consensus       271 ~~~  273 (359)
T 3vhe_A          271 VYT  273 (359)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            553

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=6.7e-31  Score=196.03  Aligned_cols=164  Identities=21%  Similarity=0.308  Sum_probs=133.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++..  ++..||+|++... ......+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.+
T Consensus        46 G~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~  123 (309)
T 3p86_A           46 GAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYR  123 (309)
T ss_dssp             EECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHH
T ss_pred             ecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHH
Confidence            4456788998865  6888999998744 345566788999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      ++......            ..+++..++.++.|++.||.|||+++  ++||||||+||+++.++.+||+|||++.....
T Consensus       124 ~l~~~~~~------------~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~  191 (309)
T 3p86_A          124 LLHKSGAR------------EQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS  191 (309)
T ss_dssp             HHHSTTHH------------HHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred             HHhhcCCC------------CCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence            99764210            13889999999999999999999999  99999999999999999999999999975433


Q ss_pred             -----ccccceeeeeecccCCCcccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                           ....+++.|+|||++.+.+++
T Consensus       192 ~~~~~~~~~gt~~y~aPE~~~~~~~~  217 (309)
T 3p86_A          192 TFLSSKSAAGTPEWMAPEVLRDEPSN  217 (309)
T ss_dssp             ----------CCTTSCHHHHTTCCCC
T ss_pred             cccccccCCCCccccChhhhcCCCCC
Confidence                 245678999999999887653

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.4e-31  Score=198.54  Aligned_cols=160  Identities=23%  Similarity=0.283  Sum_probs=132.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-------------------------HHHHHHHHHHHHHHhcCCCcceeeE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-------------------------DEALHEFKREIDLFCKLDHAHVVKM   56 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-------------------------~~~~~~~~~E~~~l~~l~h~~i~~~   56 (183)
                      |.-.++.||++.+..+++.||+|++.....                         ....+.+.+|+++++.++||||+++
T Consensus        22 G~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~  101 (298)
T 2zv2_A           22 GKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKL  101 (298)
T ss_dssp             EC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTTBCCE
T ss_pred             eecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCCCCeE
Confidence            455678999999999999999999874321                         1123568899999999999999999


Q ss_pred             EeEEec--CCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceeccccc
Q psy2674          57 IGICRD--GDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAA  134 (183)
Q Consensus        57 ~~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~  134 (183)
                      ++++.+  .+..+++|||+++++|.++...                ..+++..++.++.|++.||.|||+++++|+||||
T Consensus       102 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp  165 (298)
T 2zv2_A          102 VEVLDDPNEDHLYMVFELVNQGPVMEVPTL----------------KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKP  165 (298)
T ss_dssp             EEEEECSSSSEEEEEEECCTTCBSCCSSCS----------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             EEEEEcCCCCEEEEEEecCCCCcHHHHhhc----------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            999986  5678999999998988764321                2589999999999999999999999999999999


Q ss_pred             ceeEeccCCceEEecccCCCCCCc-----ccccceeeeeecccCCCcc
Q psy2674         135 RNCLISSDLSVKISLSGLSKDTYQ-----KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       135 ~nil~~~~~~~ki~dfg~a~~~~~-----~~~~~~~~~~~pe~~~~~~  177 (183)
                      +||+++.++.+||+|||++.....     ....+++.|+|||++.+..
T Consensus       166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  213 (298)
T 2zv2_A          166 SNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETR  213 (298)
T ss_dssp             GGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTC
T ss_pred             HHEEECCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCC
Confidence            999999999999999999975543     2456789999999997654

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=4e-31  Score=197.36  Aligned_cols=158  Identities=25%  Similarity=0.347  Sum_probs=133.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.+|.||++.+. +++.||+|++.... +......+.+|+++++.++||||+++++++.+++..+++|||++ ++|.+
T Consensus        30 G~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~l~~  107 (311)
T 3niz_A           30 GEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKK  107 (311)
T ss_dssp             EECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EEHHH
T ss_pred             cCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CCHHH
Confidence            44567889999874 58999999987432 33344678899999999999999999999999999999999998 68888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      .+.....              .+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++.....  
T Consensus       108 ~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~  173 (311)
T 3niz_A          108 VLDENKT--------------GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV  173 (311)
T ss_dssp             HHHTCTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred             HHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence            8865432              589999999999999999999999999999999999999999999999999975432  


Q ss_pred             ---ccccceeeeeecccCCC
Q psy2674         159 ---KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~  175 (183)
                         ....++++|+|||++.+
T Consensus       174 ~~~~~~~~t~~y~aPE~~~~  193 (311)
T 3niz_A          174 RSYTHEVVTLWYRAPDVLMG  193 (311)
T ss_dssp             C---CCCCCCTTCCHHHHTT
T ss_pred             ccccCCcccCCcCCHHHhcC
Confidence               23467899999999876

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.97  E-value=2e-30  Score=198.55  Aligned_cols=178  Identities=25%  Similarity=0.404  Sum_probs=144.3

Q ss_pred             CCCCCceeeeccC-------CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKASD-------PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~-------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |.-.+|.||++.+       ..++..||+|++...........+.+|+++++.+ +||||+++++++.+++..+++|||+
T Consensus        78 G~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~  157 (382)
T 3tt0_A           78 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA  157 (382)
T ss_dssp             EECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred             ecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEec
Confidence            3456778888864       3456789999998777777778899999999999 9999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          74 DWGDLKQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++++|.+++........... .........+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+
T Consensus       158 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~  237 (382)
T 3tt0_A          158 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL  237 (382)
T ss_dssp             TTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSC
T ss_pred             CCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCc
Confidence            99999999987653221111 11112223589999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc-------cccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +......       ...++..|+|||++.+..++
T Consensus       238 a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  271 (382)
T 3tt0_A          238 ARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT  271 (382)
T ss_dssp             CCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCC
T ss_pred             ccccccccccccccCCCCCcceeCHHHhcCCCCC
Confidence            9855432       23346789999998776553

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.97  E-value=3.1e-31  Score=199.96  Aligned_cols=177  Identities=28%  Similarity=0.473  Sum_probs=140.8

Q ss_pred             CCCCCceeeeccCC-----CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDP-----QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.+.     .+++.||+|++.........+.+.+|+.+++.++||||+++++++.+++..+++|||++++
T Consensus        56 g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~  135 (343)
T 1luf_A           56 GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYG  135 (343)
T ss_dssp             EECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCC
Confidence            33456778888765     5679999999987767777778999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCC---------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEE
Q psy2674          77 DLKQFLLATRKDSKDK---------SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI  147 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki  147 (183)
                      +|.+++..........         ..........+++..++.++.|++.||.|||+++++|+||||+||+++.++.+||
T Consensus       136 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl  215 (343)
T 1luf_A          136 DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKI  215 (343)
T ss_dssp             BHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             cHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEE
Confidence            9999998753211000         0000111246899999999999999999999999999999999999999999999


Q ss_pred             ecccCCCCCCcc-------cccceeeeeecccCCCccc
Q psy2674         148 SLSGLSKDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       148 ~dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      +|||++......       ...++..|+|||++.+..+
T Consensus       216 ~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  253 (343)
T 1luf_A          216 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRY  253 (343)
T ss_dssp             CCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCC
T ss_pred             eecCCCcccccCccccccCCCcccceecChhhhccCCc
Confidence            999998743322       3345778999999876555

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=5.3e-31  Score=200.58  Aligned_cols=164  Identities=16%  Similarity=0.190  Sum_probs=134.2

Q ss_pred             CCCCCceeeec-----cCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC---CcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKA-----SDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD---HAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~-----~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |.-.+|.||++     .+..+++.||+|++.... .   ..+.+|+++++.++   |+|++.+++.+..++..+++|||+
T Consensus        74 G~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~  149 (365)
T 3e7e_A           74 GEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN-P---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELY  149 (365)
T ss_dssp             EECSSEEEEEEEC-------CCCCEEEEEESSCC-H---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCC
T ss_pred             eccCCEEEEEEEecCCcccccCcEEEEEEeCCCC-h---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEecc
Confidence            44567889999     578899999999987542 2   25667777777775   999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-----------C
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----------D  142 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-----------~  142 (183)
                      ++++|.+++......          ....+++..++.++.|++.||.|||+++++||||||+|||++.           .
T Consensus       150 ~~g~L~~~l~~~~~~----------~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~  219 (365)
T 3e7e_A          150 SYGTLLNAINLYKNT----------PEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS  219 (365)
T ss_dssp             CSCBHHHHHHHHHTS----------TTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------C
T ss_pred             CCCcHHHHHHHhhcc----------cccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccccc
Confidence            999999999865321          1125899999999999999999999999999999999999988           8


Q ss_pred             CceEEecccCCCCCC---c----ccccceeeeeecccCCCcccc
Q psy2674         143 LSVKISLSGLSKDTY---Q----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       143 ~~~ki~dfg~a~~~~---~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +.+||+|||+|....   .    ....+|.+|+|||++.+.+|+
T Consensus       220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  263 (365)
T 3e7e_A          220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWN  263 (365)
T ss_dssp             TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBS
T ss_pred             CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCC
Confidence            999999999996432   1    245679999999999988764

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.97  E-value=3.5e-31  Score=198.11  Aligned_cols=161  Identities=17%  Similarity=0.267  Sum_probs=137.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC--ccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD--PHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++.........+.+.+|+++++.++||||+++++++...+  ..+++|||+++++|.
T Consensus        18 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~   97 (319)
T 4euu_A           18 GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLY   97 (319)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHH
T ss_pred             cCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHH
Confidence            445788999999999999999999875443333457789999999999999999999998755  679999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe----ccCCceEEecccCCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI----SSDLSVKISLSGLSKD  155 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~----~~~~~~ki~dfg~a~~  155 (183)
                      +++......            ..+++..++.++.|++.||.|||+++++|+||||+||++    +..+.+||+|||++..
T Consensus        98 ~~l~~~~~~------------~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~  165 (319)
T 4euu_A           98 TVLEEPSNA------------YGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (319)
T ss_dssp             HHHHSGGGT------------TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred             HHHHHhccc------------cCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence            999865321            138999999999999999999999999999999999999    7788899999999986


Q ss_pred             CCcc----cccceeeeeecccCC
Q psy2674         156 TYQK----EYYKYRWVICSNIAE  174 (183)
Q Consensus       156 ~~~~----~~~~~~~~~~pe~~~  174 (183)
                      ....    ...+++.|+|||++.
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~  188 (319)
T 4euu_A          166 LEDDEQFVSLYGTEEYLHPDMYE  188 (319)
T ss_dssp             CCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             cCCCCceeecccCCCccCHHHhh
Confidence            5433    356789999999875

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.97  E-value=1.2e-30  Score=192.09  Aligned_cols=163  Identities=15%  Similarity=0.215  Sum_probs=141.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++... ......+.+.+|+.+++.++||||+++++++.+++..++++||+++++|.+
T Consensus        15 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~   94 (284)
T 3kk8_A           15 GKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFE   94 (284)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             cCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHH
Confidence            3446788999999999999999998743 355566788999999999999999999999999999999999999999998


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc---eEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~---~ki~dfg~a~~~~  157 (183)
                      .+....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.   ++|+|||++....
T Consensus        95 ~~~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           95 DIVARE---------------FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             HHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred             HHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcc
Confidence            887663               4899999999999999999999999999999999999975544   9999999997554


Q ss_pred             cc----cccceeeeeecccCCCcccc
Q psy2674         158 QK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..    ...+++.|+|||++.+.+++
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~  185 (284)
T 3kk8_A          160 DSEAWHGFAGTPGYLSPEVLKKDPYS  185 (284)
T ss_dssp             SSCBCCCSCSCGGGCCHHHHTTCCBC
T ss_pred             cCccccCCCCCcCCcCchhhcCCCCC
Confidence            43    35678999999999887653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.97  E-value=6.3e-31  Score=194.64  Aligned_cols=163  Identities=26%  Similarity=0.397  Sum_probs=135.8

Q ss_pred             CCCCCceeeecc----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKAS----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~   75 (183)
                      |.-.++.||++.    +..+++.||+|++... .....+.+.+|+++++.++||||+++++++..  ....+++|||+++
T Consensus        19 g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~   97 (295)
T 3ugc_A           19 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY   97 (295)
T ss_dssp             EECSSEEEEEEEECTTCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTT
T ss_pred             eccCCEEEEEEEEecccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCC
Confidence            445678888887    7789999999998744 44556689999999999999999999999865  3568999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++.....              .+++..++.++.|++.|+.|||+++++|+||||+||+++.++.++|+|||++..
T Consensus        98 ~~L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           98 GSLRDYLQKHKE--------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  163 (295)
T ss_dssp             CBHHHHHHHCGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred             CCHHHHHHhccc--------------ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCccccc
Confidence            999999977543              488999999999999999999999999999999999999999999999999986


Q ss_pred             CCcc--------cccceeeeeecccCCCcccc
Q psy2674         156 TYQK--------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       156 ~~~~--------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ....        ...++..|+|||++.+..++
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  195 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFS  195 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCC
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCC
Confidence            5432        23345679999998776553

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.97  E-value=3.4e-31  Score=196.48  Aligned_cols=163  Identities=23%  Similarity=0.363  Sum_probs=136.0

Q ss_pred             CCCCCceeeecc----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKAS----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~   75 (183)
                      |.-.++.||.+.    +..+++.||+|++.........+.+.+|+++++.++||||+++++++.++  ...+++|||+++
T Consensus        30 g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~  109 (302)
T 4e5w_A           30 GEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS  109 (302)
T ss_dssp             EECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTT
T ss_pred             CCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCC
Confidence            445678888887    78899999999998554444456789999999999999999999999876  668999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++.....              .+++..++.++.|++.|+.+||+++++|+||||+||+++.++.++|+|||++..
T Consensus       110 ~~L~~~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          110 GSLKEYLPKNKN--------------KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKA  175 (302)
T ss_dssp             CBHHHHHHHHTT--------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEE
T ss_pred             CcHHHHHHhccc--------------cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECccccccc
Confidence            999999966543              589999999999999999999999999999999999999999999999999975


Q ss_pred             CCcc--------cccceeeeeecccCCCccc
Q psy2674         156 TYQK--------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~~--------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....        ...++..|+|||++.+..+
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  206 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKF  206 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHHCEE
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecCCCC
Confidence            5432        3345677999999877654

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.97  E-value=7.8e-31  Score=195.46  Aligned_cols=176  Identities=26%  Similarity=0.431  Sum_probs=140.6

Q ss_pred             CCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           3 LIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         3 ~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      .-.++.||++.+     ..++..||+|++.........+.+.+|+++++.++||||+++++++.+++..++++||+++++
T Consensus        33 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~  112 (314)
T 2ivs_A           33 EGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGS  112 (314)
T ss_dssp             ECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             ccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCC
Confidence            345667777765     456799999999876677777889999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCC---------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEe
Q psy2674          78 LKQFLLATRKDSKDK---------SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS  148 (183)
Q Consensus        78 L~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~  148 (183)
                      |.+++......+...         ..........+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+
T Consensus       113 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~  192 (314)
T 2ivs_A          113 LRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS  192 (314)
T ss_dssp             HHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEEC
T ss_pred             HHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEc
Confidence            999998764311100         00001122347889999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCcc-------cccceeeeeecccCCCccc
Q psy2674         149 LSGLSKDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       149 dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      |||++......       ...++..|+|||++.+..+
T Consensus       193 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  229 (314)
T 2ivs_A          193 DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIY  229 (314)
T ss_dssp             CCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEE
T ss_pred             cccccccccccccceeccCCCCcccccChhhhcCCCc
Confidence            99999755332       2334677999999876654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=202.08  Aligned_cols=163  Identities=20%  Similarity=0.238  Sum_probs=140.8

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCC-------HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKD-------DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      +|.-.++.||++.+..+++.||+|.+.....       ......+.+|+.+++.++||||+++++++.+++..++++|++
T Consensus        32 lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~  111 (335)
T 3dls_A           32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKH  111 (335)
T ss_dssp             CSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeC
Confidence            3566788999999999999999999875431       112335778999999999999999999999999999999998


Q ss_pred             CCC-CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          74 DWG-DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        74 ~~~-~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      .++ +|.+++....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+
T Consensus       112 ~~g~~l~~~~~~~~---------------~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~  176 (335)
T 3dls_A          112 GSGLDLFAFIDRHP---------------RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGS  176 (335)
T ss_dssp             TTSCBHHHHHHTCC---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred             CCCccHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence            766 8999987653               489999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc----cccceeeeeecccCCCccc
Q psy2674         153 SKDTYQK----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       153 a~~~~~~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      +......    ...+|+.|+|||++.+.++
T Consensus       177 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  206 (335)
T 3dls_A          177 AAYLERGKLFYTFCGTIEYCAPEVLMGNPY  206 (335)
T ss_dssp             CEECCTTCCBCEECSCGGGCCHHHHTTCCB
T ss_pred             ceECCCCCceeccCCCccccChhhhcCCCC
Confidence            9865443    3457899999999988766

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.97  E-value=3.8e-31  Score=198.87  Aligned_cols=161  Identities=15%  Similarity=0.123  Sum_probs=138.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      +|.-.++.||++.+..+++.||+|++......   +.+.+|+.+++.+ +|+||+++++++.+++..+++|||+ +++|.
T Consensus        17 lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~   92 (330)
T 2izr_A           17 IGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA---PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLE   92 (330)
T ss_dssp             CCC-CTTSEEEEEETTTTEEEEEEEEETTCSS---CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHH
T ss_pred             eeccCCceEEEEEECCCCcEEEEEEeccccch---HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHH
Confidence            35667889999999999999999998744332   2578899999999 9999999999999999999999999 79999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc-----eEEecccCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-----VKISLSGLSK  154 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~-----~ki~dfg~a~  154 (183)
                      +++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.     ++|+|||++.
T Consensus        93 ~~~~~~~~--------------~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A           93 DLFDLCDR--------------TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             HHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred             HHHHHcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence            99986532              5899999999999999999999999999999999999988776     9999999997


Q ss_pred             CCCc------------ccccceeeeeecccCCCcccc
Q psy2674         155 DTYQ------------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       155 ~~~~------------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ....            ....+|+.|+|||++.+..++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  195 (330)
T 2izr_A          159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQS  195 (330)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC
T ss_pred             eeecCCCCccccccccCCcCCCccccChHHHcCCCCC
Confidence            5422            245678999999999887663

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=3.8e-31  Score=200.93  Aligned_cols=163  Identities=17%  Similarity=0.222  Sum_probs=143.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..||+|++.........+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|.++
T Consensus        42 g~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  121 (360)
T 3eqc_A           42 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV  121 (360)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHH
T ss_pred             cCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHH
Confidence            44578899999999999999999998776777777899999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCC---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTY---  157 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~---  157 (183)
                      +....               .+++..+..++.+++.++.|||+. +++|+||||+||+++.++.++|+|||++....   
T Consensus       122 l~~~~---------------~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  186 (360)
T 3eqc_A          122 LKKAG---------------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  186 (360)
T ss_dssp             HHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred             HHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence            98764               488999999999999999999996 99999999999999999999999999986432   


Q ss_pred             cccccceeeeeecccCCCcccc
Q psy2674         158 QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .....+++.|+|||++.+..++
T Consensus       187 ~~~~~gt~~y~aPE~~~~~~~~  208 (360)
T 3eqc_A          187 ANSFVGTRSYMSPERLQGTHYS  208 (360)
T ss_dssp             ----CCCCTTCCHHHHTTCCCS
T ss_pred             ccCCCCCCCeECHHHHcCCCCC
Confidence            2345778999999999887654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.97  E-value=2.9e-31  Score=216.01  Aligned_cols=164  Identities=18%  Similarity=0.235  Sum_probs=142.6

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      +|--.+|.||++.+..+++.||+|++....  .....+.+.+|..++..+ +|++|+.+++++.+.+.++++|||+++++
T Consensus       349 LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~  428 (674)
T 3pfq_A          349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGD  428 (674)
T ss_dssp             SSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCB
T ss_pred             EccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCc
Confidence            356678999999999999999999986321  112234678899999988 79999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++...+               .+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+...
T Consensus       429 L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~  493 (674)
T 3pfq_A          429 LMYHIQQVG---------------RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI  493 (674)
T ss_dssp             HHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred             HHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence            999998764               48999999999999999999999999999999999999999999999999998532


Q ss_pred             -----cccccceeeeeecccCCCcccc
Q psy2674         158 -----QKEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 -----~~~~~~~~~~~~pe~~~~~~~~  179 (183)
                           ....++|++|+|||++.+.+|+
T Consensus       494 ~~~~~~~~~~GT~~Y~APE~l~~~~~~  520 (674)
T 3pfq_A          494 WDGVTTKTFCGTPDYIAPEIIAYQPYG  520 (674)
T ss_dssp             CTTCCBCCCCSCSSSCCHHHHTCCCBS
T ss_pred             cCCcccccccCCCcccCHhhhcCCCCC
Confidence                 2356789999999999887774

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=6.3e-31  Score=195.89  Aligned_cols=159  Identities=18%  Similarity=0.273  Sum_probs=135.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++.... +....+.+.+|+.+++.++||||+++++++.+++..++++||+++++|.+
T Consensus        12 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~   91 (311)
T 4agu_A           12 GEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHE   91 (311)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHH
T ss_pred             eecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHH
Confidence            44578899999999999999999987443 44456678899999999999999999999999999999999999888888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      ++....               .+++..+..++.|++.|+.|||++|++|+||+|+||+++.++.++|+|||++.....  
T Consensus        92 ~~~~~~---------------~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  156 (311)
T 4agu_A           92 LDRYQR---------------GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS  156 (311)
T ss_dssp             HHHTSS---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             HHhhhc---------------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence            876543               489999999999999999999999999999999999999999999999999976543  


Q ss_pred             ---ccccceeeeeecccCCC
Q psy2674         159 ---KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~  175 (183)
                         ....++++|+|||++.+
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~  176 (311)
T 4agu_A          157 DYYDDEVATRWYRSPELLVG  176 (311)
T ss_dssp             ---------GGGCCHHHHHT
T ss_pred             cccCCCcCCccccChHHHhc
Confidence               24567899999999865

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.97  E-value=3.5e-31  Score=200.62  Aligned_cols=160  Identities=19%  Similarity=0.219  Sum_probs=126.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.||+|++.....   .+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.+.
T Consensus        62 G~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~  138 (349)
T 2w4o_A           62 GRGATSIVYRCKQKGTQKPYALKVLKKTVD---KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDR  138 (349)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             eeCCCEEEEEEEECCCCcEEEEEEeccchh---HHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHH
Confidence            445678999999999999999999875432   34678899999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---CCceEEecccCCCCCCc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---~~~~ki~dfg~a~~~~~  158 (183)
                      +....               .+++..++.++.|++.||.|||+++++||||||+||+++.   ++.+||+|||++.....
T Consensus       139 l~~~~---------------~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~  203 (349)
T 2w4o_A          139 IVEKG---------------YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEH  203 (349)
T ss_dssp             HTTCS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------
T ss_pred             HHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCc
Confidence            86543               4889999999999999999999999999999999999975   89999999999986543


Q ss_pred             c----cccceeeeeecccCCCcccc
Q psy2674         159 K----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .    ...+++.|+|||++.+..|+
T Consensus       204 ~~~~~~~~gt~~y~aPE~~~~~~~~  228 (349)
T 2w4o_A          204 QVLMKTVCGTPGYCAPEILRGCAYG  228 (349)
T ss_dssp             ---------CGGGSCHHHHTTCCCC
T ss_pred             ccccccccCCCCccCHHHhcCCCCC
Confidence            2    45678999999999886653

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.97  E-value=5.1e-31  Score=197.46  Aligned_cols=163  Identities=20%  Similarity=0.253  Sum_probs=140.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH-----HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD-----EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.+..+++.||+|.+......     ...+.+.+|+.+++.++||||+++++++.+++..++++||++++
T Consensus        21 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  100 (321)
T 2a2a_A           21 GSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGG  100 (321)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             eecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCC
Confidence            4456789999999999999999998743221     13457899999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC----ceEEecccC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL----SVKISLSGL  152 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~----~~ki~dfg~  152 (183)
                      +|.+++....               .+++..++.++.|++.|+.|||+++++|+||+|+||+++.++    .++|+|||+
T Consensus       101 ~L~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A          101 ELFDFLAQKE---------------SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             BHHHHHHTCS---------------CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             cHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence            9999997543               488999999999999999999999999999999999998877    799999999


Q ss_pred             CCCCCc----ccccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +.....    ....+++.|+|||++.+.+++
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  196 (321)
T 2a2a_A          166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG  196 (321)
T ss_dssp             CEECCTTCCCCCCCSCGGGCCHHHHTTCCCC
T ss_pred             ceecCccccccccCCCCCccCcccccCCCCC
Confidence            975543    245678999999999877653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.97  E-value=2e-30  Score=193.33  Aligned_cols=163  Identities=17%  Similarity=0.166  Sum_probs=135.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++...  .+....+.+.+|+..++.++||||+++++++.+++..++++||+++++|.
T Consensus        43 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  122 (309)
T 2h34_A           43 GRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLA  122 (309)
T ss_dssp             EECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHH
T ss_pred             cCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHH
Confidence            3456788999999999999999998743  34555678899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++....               .+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++......
T Consensus       123 ~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  187 (309)
T 2h34_A          123 AMLRRQG---------------PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDE  187 (309)
T ss_dssp             HHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence            9998763               4899999999999999999999999999999999999999999999999998755432


Q ss_pred             ------cccceeeeeecccCCCcccc
Q psy2674         160 ------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ------~~~~~~~~~~pe~~~~~~~~  179 (183)
                            ...++..|+|||++.+..++
T Consensus       188 ~~~~~~~~~~~~~y~aPE~~~~~~~~  213 (309)
T 2h34_A          188 KLTQLGNTVGTLYYMAPERFSESHAT  213 (309)
T ss_dssp             ---------CCGGGCCGGGTCC----
T ss_pred             ccccccccCCCcCccCHHHHcCCCCC
Confidence                  34678899999999876543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.97  E-value=1e-30  Score=194.73  Aligned_cols=176  Identities=23%  Similarity=0.306  Sum_probs=140.6

Q ss_pred             CCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           3 LIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         3 ~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      .-.++.||++.     ...+++.||+|.+.........+.+.+|+.+++.+ +||||+++++++.+++..++++||++++
T Consensus        33 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~  112 (313)
T 1t46_A           33 AGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYG  112 (313)
T ss_dssp             ECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTE
T ss_pred             ccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCC
Confidence            34566677765     67789999999998777766777899999999999 9999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCC---CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKD---KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      +|.+++.........   ...........+++..++.++.|++.||.+||+++++|+||||+||+++.++.++|+|||++
T Consensus       113 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  192 (313)
T 1t46_A          113 DLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA  192 (313)
T ss_dssp             EHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGG
T ss_pred             CHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccc
Confidence            999999876421000   00000111235889999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcc-------cccceeeeeecccCCCccc
Q psy2674         154 KDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       154 ~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ......       ...++..|+|||++.+..+
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  224 (313)
T 1t46_A          193 RDIKNDSNYVVKGNARLPVKWMAPESIFNCVY  224 (313)
T ss_dssp             SCTTSCTTSEECSSSEECGGGCCHHHHHHCCC
T ss_pred             ccccccccceeccCCCCcceeeChHHhcCCCC
Confidence            865443       2334567999998876554

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.97  E-value=6.3e-31  Score=207.07  Aligned_cols=160  Identities=23%  Similarity=0.330  Sum_probs=138.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.+|.||++.+..+++.||+|++... ........+.+|+++++.++||||+++++++.+++..++++||+++++|.+
T Consensus        31 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~  110 (486)
T 3mwu_A           31 GKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD  110 (486)
T ss_dssp             ECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             eecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHH
Confidence            5567889999999999999999998522 111123478899999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec---cCCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~---~~~~~ki~dfg~a~~~~  157 (183)
                      .+....               .+++..++.++.|++.||.|||++|++||||||+||+++   .++.+||+|||++....
T Consensus       111 ~~~~~~---------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A          111 EIIKRK---------------RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             HHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBC
T ss_pred             HHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECC
Confidence            887664               489999999999999999999999999999999999995   45679999999998554


Q ss_pred             cc----cccceeeeeecccCCCc
Q psy2674         158 QK----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       158 ~~----~~~~~~~~~~pe~~~~~  176 (183)
                      ..    ...+|++|+|||++.+.
T Consensus       176 ~~~~~~~~~gt~~y~aPE~~~~~  198 (486)
T 3mwu_A          176 QNTKMKDRIGTAYYIAPEVLRGT  198 (486)
T ss_dssp             CC----CCTTGGGGCCGGGGGSC
T ss_pred             CCCccCCCcCCCCCCCHHHhCCC
Confidence            32    45689999999999874

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=2.3e-30  Score=193.16  Aligned_cols=159  Identities=18%  Similarity=0.161  Sum_probs=134.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++.. ............|+..+..+ +|+||+++++++.+++..++++|+++ ++|.
T Consensus        66 G~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~~-~~L~  144 (311)
T 3p1a_A           66 GHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCG-PSLQ  144 (311)
T ss_dssp             EEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCC-CBHH
T ss_pred             ccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEeccC-CCHH
Confidence            345678999999999999999999864 33444455566666666555 99999999999999999999999995 8999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++......
T Consensus       145 ~~~~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~  210 (311)
T 3p1a_A          145 QHCEAWGA--------------SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA  210 (311)
T ss_dssp             HHHHHHCS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred             HHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence            98877643              5899999999999999999999999999999999999999999999999998755432


Q ss_pred             ----cccceeeeeecccCCC
Q psy2674         160 ----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~  175 (183)
                          ...+|+.|+|||++.+
T Consensus       211 ~~~~~~~gt~~y~aPE~~~~  230 (311)
T 3p1a_A          211 GAGEVQEGDPRYMAPELLQG  230 (311)
T ss_dssp             ----CCCCCGGGCCGGGGGT
T ss_pred             CCCcccCCCccccCHhHhcC
Confidence                3457899999999876

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.97  E-value=8.1e-31  Score=192.63  Aligned_cols=163  Identities=23%  Similarity=0.307  Sum_probs=138.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..++..||+|++.....  ......+.+|+.+++.++||||+++++++.+.+..+++|||+++++|.
T Consensus        18 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~   97 (279)
T 3fdn_A           18 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY   97 (279)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred             ecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHH
Confidence            445678999999999999999999863221  112346889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.+....               .+++..++.++.|++.++.+||++|++|+||+|+||+++.++.++|+|||++......
T Consensus        98 ~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~  162 (279)
T 3fdn_A           98 RELQKLS---------------KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  162 (279)
T ss_dssp             HHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence            9997764               4899999999999999999999999999999999999999999999999998755433


Q ss_pred             ---cccceeeeeecccCCCcccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~~  179 (183)
                         ...++..|+|||++.+..++
T Consensus       163 ~~~~~~~~~~y~aPE~~~~~~~~  185 (279)
T 3fdn_A          163 RRTDLCGTLDYLPPEMIEGRMHD  185 (279)
T ss_dssp             -----CCCCTTCCHHHHTTCCCC
T ss_pred             cccccCCCCCccCHhHhccCCCC
Confidence               45678999999998876553

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=1.7e-30  Score=189.76  Aligned_cols=164  Identities=15%  Similarity=0.212  Sum_probs=142.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+.  +..+|+|++... ......+.+.+|+.+++.++||||+++++++.++  +..++++||+++++|
T Consensus        19 g~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L   96 (271)
T 3kmu_A           19 NENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSL   96 (271)
T ss_dssp             EEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBH
T ss_pred             cCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcH
Confidence            33467788988764  888999999844 3556667899999999999999999999999887  778999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ceecccccceeEeccCCceEEecccCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      .+++.....             ..+++..++.++.|++.|+.|||+++  ++|+||+|+||+++.++.++++||+++...
T Consensus        97 ~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A           97 YNVLHEGTN-------------FVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             HHHHHSCSS-------------CCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTT
T ss_pred             HHHHhhccc-------------CCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeee
Confidence            999976532             24899999999999999999999999  999999999999999999999999998877


Q ss_pred             CcccccceeeeeecccCCCccccc
Q psy2674         157 YQKEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       157 ~~~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                      ......+++.|+|||++.+..++.
T Consensus       164 ~~~~~~~t~~y~aPE~~~~~~~~~  187 (271)
T 3kmu_A          164 QSPGRMYAPAWVAPEALQKKPEDT  187 (271)
T ss_dssp             SCTTCBSCGGGSCHHHHHSCGGGS
T ss_pred             cccCccCCccccChhhhccCCCCC
Confidence            777788899999999998765543

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=6.9e-31  Score=198.27  Aligned_cols=176  Identities=24%  Similarity=0.356  Sum_probs=134.4

Q ss_pred             CCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           3 LIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         3 ~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      .-.++.||++.+     ..++..||+|++.........+.+.+|+.+++.+ +||||+++++++.+++..+++|||++++
T Consensus        55 ~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g  134 (344)
T 1rjb_A           55 SGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYG  134 (344)
T ss_dssp             ECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             CCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCC
Confidence            345677777764     5678899999998655555567899999999999 8999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCC--------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEe
Q psy2674          77 DLKQFLLATRKDSKD--------KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS  148 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~  148 (183)
                      +|.+++.........        ...........+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+
T Consensus       135 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~  214 (344)
T 1rjb_A          135 DLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC  214 (344)
T ss_dssp             BHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEEC
T ss_pred             cHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeC
Confidence            999999765321000        000001112347899999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCcc-------cccceeeeeecccCCCccc
Q psy2674         149 LSGLSKDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       149 dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      |||++......       ...++..|+|||++.+.++
T Consensus       215 Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  251 (344)
T 1rjb_A          215 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY  251 (344)
T ss_dssp             CCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             CCccCcccccCccceeccCccCccCccCHHHhccCCC
Confidence            99999855332       2334567999999876655

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=7.9e-33  Score=208.49  Aligned_cols=158  Identities=15%  Similarity=0.097  Sum_probs=128.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-------CHHHHHHHHHHHHHHhcCC---------CcceeeEEeEEe----
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-------DDEALHEFKREIDLFCKLD---------HAHVVKMIGICR----   61 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~---------h~~i~~~~~~~~----   61 (183)
                      |.-.+|.||++.+  +++.||+|++....       .....+.+.+|+.+++.++         |+||+++.+.+.    
T Consensus        29 G~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~  106 (336)
T 2vuw_A           29 GEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGS  106 (336)
T ss_dssp             EEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESS
T ss_pred             cccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCC
Confidence            3446788999987  68999999997442       1222346788888888775         777776666542    


Q ss_pred             -------------c-------------CCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q psy2674          62 -------------D-------------GDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQV  115 (183)
Q Consensus        62 -------------~-------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  115 (183)
                                   +             ++..+++|||+++|++.+.+...                .+++..++.++.|+
T Consensus       107 ~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~----------------~~~~~~~~~i~~qi  170 (336)
T 2vuw_A          107 YPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK----------------LSSLATAKSILHQL  170 (336)
T ss_dssp             CCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT----------------CCCHHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc----------------CCCHHHHHHHHHHH
Confidence                         2             67899999999988765555321                47899999999999


Q ss_pred             HHHHHHHh-cCCceecccccceeEeccCC--------------------ceEEecccCCCCCCcccccceeeeeecccCC
Q psy2674         116 ALGLEHIS-DKRLIHKDIAARNCLISSDL--------------------SVKISLSGLSKDTYQKEYYKYRWVICSNIAE  174 (183)
Q Consensus       116 ~~~l~~lh-~~~ivH~di~~~nil~~~~~--------------------~~ki~dfg~a~~~~~~~~~~~~~~~~pe~~~  174 (183)
                      +.||.||| +++|+||||||+|||++.++                    .+||+|||+|+........+|+.|+|||++.
T Consensus       171 ~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y~aPE~~~  250 (336)
T 2vuw_A          171 TASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDEDLFT  250 (336)
T ss_dssp             HHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCTTCSGGGC
T ss_pred             HHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecccChhhhc
Confidence            99999999 99999999999999999876                    8999999999987777778999999999998


Q ss_pred             Ccc
Q psy2674         175 GRR  177 (183)
Q Consensus       175 ~~~  177 (183)
                      |..
T Consensus       251 g~~  253 (336)
T 2vuw_A          251 GDG  253 (336)
T ss_dssp             CCS
T ss_pred             CCC
Confidence            764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=5.5e-31  Score=193.01  Aligned_cols=162  Identities=21%  Similarity=0.238  Sum_probs=140.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.||+|++.........+.+.+|+.+++.++||||+++++++.+++..++++||+++++|.++
T Consensus        16 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (276)
T 2yex_A           16 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR   95 (276)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGG
T ss_pred             ecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHH
Confidence            44567889999999999999999987544444556889999999999999999999999999999999999998999887


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++.....   
T Consensus        96 l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  160 (276)
T 2yex_A           96 IEPDI---------------GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  160 (276)
T ss_dssp             SBTTT---------------BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             Hhhcc---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence            75432               488999999999999999999999999999999999999999999999999975432   


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....++..|+|||++.+..+
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~~  184 (276)
T 2yex_A          161 ERLLNKMCGTLPYVAPELLKRREF  184 (276)
T ss_dssp             ECCBCCCCSCGGGCCGGGGTCSSB
T ss_pred             hhcccCCccccCccChHHHhcCCC
Confidence                24567889999999987654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=4.1e-30  Score=190.15  Aligned_cols=162  Identities=23%  Similarity=0.291  Sum_probs=142.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.+|+|++...  ......+.+.+|+.+++.++|+||+++++++.+++..++++||+++++|.
T Consensus        24 g~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  103 (294)
T 2rku_A           24 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL  103 (294)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred             eecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHH
Confidence            3456788999999999999999998643  34556678899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++..... 
T Consensus       104 ~~~~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~  168 (294)
T 2rku_A          104 ELHKRRK---------------ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  168 (294)
T ss_dssp             HHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence            9887653               489999999999999999999999999999999999999999999999999975432 


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....++..|+|||++.+..+
T Consensus       169 ~~~~~~~~~~~~y~aPE~~~~~~~  192 (294)
T 2rku_A          169 GERKKVLCGTPNYIAPEVLSKKGH  192 (294)
T ss_dssp             TCCBCCCCSCCSSCCHHHHTTSCB
T ss_pred             ccccccccCCCCcCCcchhccCCC
Confidence                23567889999999887654

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.97  E-value=8.1e-31  Score=201.94  Aligned_cols=159  Identities=15%  Similarity=0.272  Sum_probs=130.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhc-CCCcceeeEEeEEec----CCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCK-LDHAHVVKMIGICRD----GDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~   76 (183)
                      |.-.+|.||++.+..+++.||+|++...      ..+.+|++++.. .+||||+++++++..    ...++++|||++++
T Consensus        71 G~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg  144 (400)
T 1nxk_A           71 GLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG  144 (400)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             eeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCC
Confidence            4457889999999999999999998632      256778887744 589999999999875    55689999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---CCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---~~~~ki~dfg~a  153 (183)
                      +|.+++.....             ..+++..++.++.|++.||.|||+++++||||||+||+++.   ++.+||+|||++
T Consensus       145 ~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a  211 (400)
T 1nxk_A          145 ELFSRIQDRGD-------------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA  211 (400)
T ss_dssp             EHHHHHHCC----------------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             cHHHHHHHhCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence            99999976432             24899999999999999999999999999999999999987   789999999999


Q ss_pred             CCCCc----ccccceeeeeecccCCCcccc
Q psy2674         154 KDTYQ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .....    ...++|++|+|||++.+..|+
T Consensus       212 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  241 (400)
T 1nxk_A          212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYD  241 (400)
T ss_dssp             EECC-----------CTTCCGGGSCCCCSS
T ss_pred             cccCCCCccccCCCCCCccCHhhcCCCCCC
Confidence            86543    245678999999999887664

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=2.9e-30  Score=194.52  Aligned_cols=162  Identities=23%  Similarity=0.291  Sum_probs=142.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.+|+|++...  ......+.+.+|+.+++.++|+||+++++++.+.+..+++|||+++++|.
T Consensus        50 g~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  129 (335)
T 2owb_A           50 GKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLL  129 (335)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHH
Confidence            3456788999999999999999998743  34556678899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++....               .+++..++.++.|++.++.|||+++++|+||+|+||+++.++.++|+|||++..... 
T Consensus       130 ~~~~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~  194 (335)
T 2owb_A          130 ELHKRRK---------------ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD  194 (335)
T ss_dssp             HHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             HHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence            9887653               489999999999999999999999999999999999999999999999999975432 


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....++..|+|||++.+..+
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~~~~  218 (335)
T 2owb_A          195 GERKKVLCGTPNYIAPEVLSKKGH  218 (335)
T ss_dssp             TCCBCCCCSCCSSCCHHHHHTSCB
T ss_pred             cccccccCCCccccCHHHhccCCC
Confidence                23567889999999877654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=2.3e-31  Score=199.68  Aligned_cols=159  Identities=22%  Similarity=0.297  Sum_probs=132.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.+|.||++.+..+++.||+|++...........+.+|+.+++.++||||+++++++.+++..+++|||++ ++|.++
T Consensus        11 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~   89 (324)
T 3mtl_A           11 GEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQY   89 (324)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHHH
T ss_pred             cCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cCHHHH
Confidence            4567889999999999999999998754443333355689999999999999999999999999999999998 799998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....              .+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||++.....   
T Consensus        90 ~~~~~~--------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~  155 (324)
T 3mtl_A           90 LDDCGN--------------IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  155 (324)
T ss_dssp             HHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc
Confidence            877543              588999999999999999999999999999999999999999999999999875442   


Q ss_pred             --ccccceeeeeecccCCC
Q psy2674         159 --KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~  175 (183)
                        ....++++|+|||++.+
T Consensus       156 ~~~~~~~t~~y~aPE~~~~  174 (324)
T 3mtl_A          156 TYDNEVVTLWYRPPDILLG  174 (324)
T ss_dssp             -------CGGGCCHHHHTT
T ss_pred             ccccccCcccccChhhhcC
Confidence              23466899999999876

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=1.5e-30  Score=193.20  Aligned_cols=162  Identities=19%  Similarity=0.297  Sum_probs=141.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.||+|++.........+.+.+|+.+++.++||||+++++++.+++..++++||+++++|.++
T Consensus        31 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  110 (303)
T 3a7i_A           31 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDL  110 (303)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHH
T ss_pred             cccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHH
Confidence            44567889999999999999999997554444456889999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +...                .+++..++.++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||++.....   
T Consensus       111 ~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~  174 (303)
T 3a7i_A          111 LEPG----------------PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI  174 (303)
T ss_dssp             HTTS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC
T ss_pred             HhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc
Confidence            8542                588999999999999999999999999999999999999999999999999975433   


Q ss_pred             --ccccceeeeeecccCCCcccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ....+++.|+|||++.+..++
T Consensus       175 ~~~~~~~~~~y~aPE~~~~~~~~  197 (303)
T 3a7i_A          175 KRNTFVGTPFWMAPEVIKQSAYD  197 (303)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             ccCccCCCcCccCHHHHhcCCCC
Confidence              245678899999999887654

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.97  E-value=1.7e-30  Score=191.22  Aligned_cols=162  Identities=26%  Similarity=0.343  Sum_probs=129.2

Q ss_pred             CCCCCceeeeccCCC---CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQ---DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..   .+..||+|.+.........+.+.+|+..++.++||||+++++++. ++..+++|||+++++|
T Consensus        24 g~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L  102 (281)
T 1mp8_A           24 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL  102 (281)
T ss_dssp             EECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEH
T ss_pred             eecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCH
Confidence            345678888887654   456799999887667777778999999999999999999999984 5678999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.|+.+||+++++|+||||+||+++.++.++|+|||++.....
T Consensus       103 ~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  168 (281)
T 1mp8_A          103 RSFLQVRKY--------------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  168 (281)
T ss_dssp             HHHHHHTTT--------------TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             HHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCc
Confidence            999976532              588999999999999999999999999999999999999999999999999986544


Q ss_pred             cc------ccceeeeeecccCCCccc
Q psy2674         159 KE------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~------~~~~~~~~~pe~~~~~~~  178 (183)
                      ..      ..+++.|+|||++.+.++
T Consensus       169 ~~~~~~~~~~~~~~y~aPE~~~~~~~  194 (281)
T 1mp8_A          169 STYYKASKGKLPIKWMAPESINFRRF  194 (281)
T ss_dssp             ----------CCGGGCCHHHHHHCCC
T ss_pred             ccccccccCCCcccccChhhcccCCC
Confidence            32      233567999999876655

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.97  E-value=1.2e-30  Score=205.93  Aligned_cols=162  Identities=21%  Similarity=0.349  Sum_probs=139.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++....++..||+|.+......  .+.+.+|+.+++.++||||+++++++.+++..+++|||+++++|.++
T Consensus       229 G~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~  306 (495)
T 1opk_A          229 GGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY  306 (495)
T ss_dssp             GGGTTSSEEEEEEGGGTEEEEEEECCSSSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             cCCCCeEEEEEEEcCCCeEEEEEEecCcccc--hHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHH
Confidence            4557788999999889999999999754332  45789999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+++...... 
T Consensus       307 l~~~~~-------------~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  373 (495)
T 1opk_A          307 LRECNR-------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY  373 (495)
T ss_dssp             HHHSCT-------------TTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred             HHhcCc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence            976532             258899999999999999999999999999999999999999999999999998654432 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||++.+..|
T Consensus       374 ~~~~~~~~~~~y~aPE~~~~~~~  396 (495)
T 1opk_A          374 TAHAGAKFPIKWTAPESLAYNKF  396 (495)
T ss_dssp             ECCTTCCCCGGGCCHHHHHHCEE
T ss_pred             eecCCCcCCcceeCHhHHhcCCC
Confidence                 223467999999876554

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.97  E-value=1.3e-30  Score=192.27  Aligned_cols=163  Identities=17%  Similarity=0.246  Sum_probs=136.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..+|+|.+.........+.+.+|+++++.++||||+++++++.+.+..++++||+++++|.+.
T Consensus        31 g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  110 (285)
T 3is5_A           31 GSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER  110 (285)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHH
T ss_pred             ccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHH
Confidence            44578899999999999999999987554443456789999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe---ccCCceEEecccCCCCCCc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~---~~~~~~ki~dfg~a~~~~~  158 (183)
                      +.....           ....+++..++.++.|++.||.+||+++++|+||+|+||++   +.++.++|+|||++.....
T Consensus       111 l~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~  179 (285)
T 3is5_A          111 IVSAQA-----------RGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS  179 (285)
T ss_dssp             HHHHHH-----------HTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred             HHhhhh-----------cccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence            865421           01258999999999999999999999999999999999999   4568899999999975443


Q ss_pred             ----ccccceeeeeecccCCC
Q psy2674         159 ----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~  175 (183)
                          ....+++.|+|||++.+
T Consensus       180 ~~~~~~~~~t~~y~aPE~~~~  200 (285)
T 3is5_A          180 DEHSTNAAGTALYMAPEVFKR  200 (285)
T ss_dssp             -------CTTGGGCCHHHHTT
T ss_pred             cccCcCcccccCcCChHHhcc
Confidence                24567889999999865

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=2e-30  Score=190.79  Aligned_cols=164  Identities=18%  Similarity=0.182  Sum_probs=139.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|.+... ........+.+|+..+..+ +||||+++++++.+++..++++||+++++|.
T Consensus        20 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~   99 (289)
T 1x8b_A           20 GSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA   99 (289)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             cCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHH
Confidence            3446788999999999999999998743 3344456788999999999 9999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc------------------
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS------------------  141 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~------------------  141 (183)
                      +++......           ...+++..++.++.|++.||.|||+++++|+||||+||+++.                  
T Consensus       100 ~~l~~~~~~-----------~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~  168 (289)
T 1x8b_A          100 DAISENYRI-----------MSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS  168 (289)
T ss_dssp             HHHHHHHHH-----------TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------------
T ss_pred             HHHHhhccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence            999875321           125899999999999999999999999999999999999984                  


Q ss_pred             -CCceEEecccCCCCCCcc-cccceeeeeecccCCCc
Q psy2674         142 -DLSVKISLSGLSKDTYQK-EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       142 -~~~~ki~dfg~a~~~~~~-~~~~~~~~~~pe~~~~~  176 (183)
                       ...++|+|||++...... ...+++.|+|||++.+.
T Consensus       169 ~~~~~kl~Dfg~~~~~~~~~~~~gt~~y~aPE~~~~~  205 (289)
T 1x8b_A          169 NKVMFKIGDLGHVTRISSPQVEEGDSRFLANEVLQEN  205 (289)
T ss_dssp             -CCCEEECCCTTCEETTCSCCCCCCGGGCCHHHHTTC
T ss_pred             CceEEEEcccccccccCCccccCCCccccChhHhcCC
Confidence             447999999999865543 45678999999998775

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=2.4e-30  Score=194.59  Aligned_cols=160  Identities=21%  Similarity=0.349  Sum_probs=135.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++... ......+.+.+|+.+++.++||||+++++++.+.+..+++|||+++++|..
T Consensus        34 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~  113 (331)
T 4aaa_A           34 GEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDD  113 (331)
T ss_dssp             GGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHH
T ss_pred             eecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHH
Confidence            4556788999999999999999998643 345555678899999999999999999999999999999999999888887


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      +.....               .+++..++.++.|++.|+.+||++|++|+||+|+||+++.++.++|+|||++.....  
T Consensus       114 ~~~~~~---------------~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A          114 LELFPN---------------GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             HHHSTT---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred             HHhhcc---------------CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence            765442               489999999999999999999999999999999999999999999999999975433  


Q ss_pred             ---ccccceeeeeecccCCCc
Q psy2674         159 ---KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~  176 (183)
                         ....++.+|+|||++.+.
T Consensus       179 ~~~~~~~~t~~y~aPE~~~~~  199 (331)
T 4aaa_A          179 EVYDDEVATRWYRAPELLVGD  199 (331)
T ss_dssp             -----CCCCCTTCCHHHHTTC
T ss_pred             cccCCCcCCccccCcccccCC
Confidence               245678999999998764

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.97  E-value=1.4e-30  Score=205.41  Aligned_cols=159  Identities=20%  Similarity=0.256  Sum_probs=134.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.+|.||++.+..++..+|+|++.... .......+.+|+.+++.++||||+++++++.+++..+++|||+++++|.+
T Consensus        46 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~  125 (494)
T 3lij_A           46 GSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD  125 (494)
T ss_dssp             ECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHH
T ss_pred             ecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHH
Confidence            45678899999999999999999987432 22234578899999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---CCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---~~~~ki~dfg~a~~~~  157 (183)
                      .+....               .+++..++.++.|++.||.|||+++++||||||+||+++.   .+.+||+|||++....
T Consensus       126 ~~~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~  190 (494)
T 3lij_A          126 EIIHRM---------------KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE  190 (494)
T ss_dssp             HHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECB
T ss_pred             HHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECC
Confidence            887664               4899999999999999999999999999999999999975   4569999999997554


Q ss_pred             c----ccccceeeeeecccCCC
Q psy2674         158 Q----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~----~~~~~~~~~~~pe~~~~  175 (183)
                      .    ....+|++|+|||++.+
T Consensus       191 ~~~~~~~~~gt~~y~aPE~l~~  212 (494)
T 3lij_A          191 NQKKMKERLGTAYYIAPEVLRK  212 (494)
T ss_dssp             TTBCBCCCCSCTTTCCHHHHTT
T ss_pred             CCccccccCCCcCeeCHHHHcc
Confidence            3    24568999999999875

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.97  E-value=8.4e-31  Score=196.46  Aligned_cols=165  Identities=18%  Similarity=0.236  Sum_probs=137.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.. .++..||+|++...........+.+|+.+++.++||||+++++++.+++..++++||+++++|.++
T Consensus        39 g~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  117 (326)
T 3uim_A           39 GRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASC  117 (326)
T ss_dssp             ECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHH
T ss_pred             ecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHH
Confidence            4567788999974 468999999997554433334688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---CceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK---RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      +.....           ....+++..++.++.|++.||.|||++   +++|+||||+||+++.++.++|+|||++.....
T Consensus       118 l~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  186 (326)
T 3uim_A          118 LRERPE-----------SQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY  186 (326)
T ss_dssp             HHCCST-----------TCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCS
T ss_pred             HHhccc-----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCc
Confidence            976532           112588999999999999999999999   999999999999999999999999999975432


Q ss_pred             ------ccccceeeeeecccCCCccc
Q psy2674         159 ------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ------~~~~~~~~~~~pe~~~~~~~  178 (183)
                            ....+++.|+|||++.+..+
T Consensus       187 ~~~~~~~~~~gt~~y~aPE~~~~~~~  212 (326)
T 3uim_A          187 KDTHVTTAVRGTIGHIAPEYLSTGKS  212 (326)
T ss_dssp             SSSCEECCCCSCGGGCCHHHHHHSEE
T ss_pred             ccccccccccCCcCccCHHHhccCCC
Confidence                  23447899999999876554

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=2.3e-30  Score=193.24  Aligned_cols=158  Identities=18%  Similarity=0.224  Sum_probs=133.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++...... ..+.+.+|++++..+ +||||+++++++.+++..+++|||+++++|.+
T Consensus        22 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~  100 (316)
T 2ac3_A           22 GEGAHARVQTCINLITSQEYAVKIIEKQPGH-IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILS  100 (316)
T ss_dssp             CCCSSEEEEEEECSSSCCEEEEEEEECCSSC-CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHH
T ss_pred             cCCceEEEEEEEEcCCCcEEEEEEEeeCcch-hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHH
Confidence            5567889999999999999999999744322 244788999999886 79999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc---eEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS---VKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~---~ki~dfg~a~~~~  157 (183)
                      ++....               .+++..++.++.|++.||.|||+++++|+||||+||+++.++.   +||+|||++....
T Consensus       101 ~l~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A          101 HIHKRR---------------HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             HHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred             HHhccC---------------CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence            998763               4889999999999999999999999999999999999987655   9999999987543


Q ss_pred             cc------------cccceeeeeecccCCC
Q psy2674         158 QK------------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~~------------~~~~~~~~~~pe~~~~  175 (183)
                      ..            ...+++.|+|||++.+
T Consensus       166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  195 (316)
T 2ac3_A          166 LNGDCSPISTPELLTPCGSAEYMAPEVVEA  195 (316)
T ss_dssp             ----------------CCSGGGCCHHHHHH
T ss_pred             cCCccccccccccccccCCcCccChHHhhc
Confidence            21            2347889999999864

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=2.1e-30  Score=197.83  Aligned_cols=160  Identities=19%  Similarity=0.295  Sum_probs=131.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~~   74 (183)
                      |.-.++.||++.+..+++.||+|++.. .........+.+|+.+++.++||||+++++++...+      ..+++|||++
T Consensus        34 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~  113 (371)
T 2xrw_A           34 GSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD  113 (371)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCS
T ss_pred             EecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCC
Confidence            445778999999999999999999874 345556678899999999999999999999998765      5799999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       ++|.+.+..                 .+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++.
T Consensus       114 -~~l~~~~~~-----------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~  175 (371)
T 2xrw_A          114 -ANLCQVIQM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR  175 (371)
T ss_dssp             -EEHHHHHHS-----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred             -CCHHHHHhh-----------------ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccc
Confidence             688887742                 38889999999999999999999999999999999999999999999999998


Q ss_pred             CCCcc----cccceeeeeecccCCCcccc
Q psy2674         155 DTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       155 ~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .....    ...+++.|+|||++.+.+|+
T Consensus       176 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  204 (371)
T 2xrw_A          176 TAGTSFMMTPYVVTRYYRAPEVILGMGYK  204 (371)
T ss_dssp             --------------CTTCCHHHHTTCCCC
T ss_pred             ccccccccCCceecCCccCHHHhcCCCCC
Confidence            65432    45678999999999887664

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.97  E-value=4.4e-30  Score=195.00  Aligned_cols=162  Identities=14%  Similarity=0.102  Sum_probs=139.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-----CcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-----HAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.+..+++.||+|++..  .......+.+|+.+++.++     ||||+++++++...+..+++||++ ++
T Consensus        44 G~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~  120 (360)
T 3llt_A           44 GDGTFGRVLLCQHIDNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GP  120 (360)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CC
T ss_pred             cccCCeEEEEEEECCCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CC
Confidence            445788999999999999999999863  2344456788999999886     999999999999999999999999 79


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---------------
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---------------  141 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---------------  141 (183)
                      +|.+++.....             ..+++..++.++.|++.||.|||+++++||||||+|||++.               
T Consensus       121 ~L~~~~~~~~~-------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~  187 (360)
T 3llt_A          121 SLYEIITRNNY-------------NGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTD  187 (360)
T ss_dssp             BHHHHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred             CHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccc
Confidence            99999987642             24889999999999999999999999999999999999975               


Q ss_pred             ----------CCceEEecccCCCCCCc--ccccceeeeeecccCCCcccc
Q psy2674         142 ----------DLSVKISLSGLSKDTYQ--KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       142 ----------~~~~ki~dfg~a~~~~~--~~~~~~~~~~~pe~~~~~~~~  179 (183)
                                .+.+||+|||+|.....  ....+|+.|+|||++.+.+|+
T Consensus       188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~  237 (360)
T 3llt_A          188 GKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWD  237 (360)
T ss_dssp             CCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCC
T ss_pred             cccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCC
Confidence                      78999999999985443  356779999999999887664

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.97  E-value=4.4e-30  Score=190.92  Aligned_cols=162  Identities=15%  Similarity=0.192  Sum_probs=138.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++.+++..++++||+++++|.+.
T Consensus        18 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   96 (304)
T 2jam_A           18 GSGAFSEVFLVKQRLTGKLFALKCIKKSPAF-RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDR   96 (304)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             cCCCCceEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHH
Confidence            4456789999999999999999999744322 234688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe---ccCCceEEecccCCCCCCc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~---~~~~~~ki~dfg~a~~~~~  158 (183)
                      +....               .+++..++.++.|++.|+.+||+++++|+||+|+||++   +.++.++|+|||++.....
T Consensus        97 l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~  161 (304)
T 2jam_A           97 ILERG---------------VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN  161 (304)
T ss_dssp             HHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred             HHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence            87653               48899999999999999999999999999999999999   7789999999999986544


Q ss_pred             c---cccceeeeeecccCCCcccc
Q psy2674         159 K---EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ~---~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .   ...+++.|+|||++.+.+++
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~  185 (304)
T 2jam_A          162 GIMSTACGTPGYVAPEVLAQKPYS  185 (304)
T ss_dssp             BTTHHHHSCCCBCCTTTBSSCSCC
T ss_pred             CccccccCCCCccChHHhccCCCC
Confidence            3   34578999999999887653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.97  E-value=1.5e-30  Score=190.19  Aligned_cols=161  Identities=20%  Similarity=0.306  Sum_probs=135.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+. ++..||+|++......  .+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.++
T Consensus        19 g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   95 (269)
T 4hcu_A           19 GSGQFGLVHLGYWL-NKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY   95 (269)
T ss_dssp             EECSSCEEEEEEET-TTEEEEEEEECTTSBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             cCCCccEEEEEEec-CCCeEEEEEecccccC--HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHH
Confidence            44567889988876 4777999998754332  23688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..++.++.|++.|+.+||+++++|+||||+||+++.++.++|+|||++......  
T Consensus        96 l~~~~~--------------~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  161 (269)
T 4hcu_A           96 LRTQRG--------------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  161 (269)
T ss_dssp             HHTTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHH
T ss_pred             HHhcCc--------------ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEecccccccccccccc
Confidence            966432              5889999999999999999999999999999999999999999999999999855432  


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...++..|+|||++.+..++
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~~~  185 (269)
T 4hcu_A          162 TSSTGTKFPVKWASPEVFSFSRYS  185 (269)
T ss_dssp             HSTTSTTCCGGGCCHHHHHHCCCC
T ss_pred             ccccCcccccccCCHHHhcCCCCC
Confidence                23345679999998765553

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=4.7e-30  Score=189.96  Aligned_cols=164  Identities=24%  Similarity=0.348  Sum_probs=138.7

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCcc-EEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH-YLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~-~lv~e~~~~~~   77 (183)
                      |.-.+|.||++..   ..++..+|+|.+.........+.+.+|+.+++.++||||+++++++.+++.. ++++||+.+++
T Consensus        30 g~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~  109 (298)
T 3pls_A           30 GKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGD  109 (298)
T ss_dssp             EEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCB
T ss_pred             ccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCC
Confidence            3446778888874   4455589999998777777778899999999999999999999999876655 99999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.|+.+||++|++|+||||+||+++.++.++|+|||++....
T Consensus       110 L~~~~~~~~~--------------~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  175 (298)
T 3pls_A          110 LLQFIRSPQR--------------NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDIL  175 (298)
T ss_dssp             HHHHHHCTTC--------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred             HHHHHhcccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence            9999976432              57889999999999999999999999999999999999999999999999997543


Q ss_pred             cc---------cccceeeeeecccCCCcccc
Q psy2674         158 QK---------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~---------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..         ...++..|+|||.+.+..++
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  206 (298)
T 3pls_A          176 DREYYSVQQHRHARLPVKWTALESLQTYRFT  206 (298)
T ss_dssp             TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCC
T ss_pred             CCcccccccCcCCCCCccccChhhhccCCCC
Confidence            32         23457789999999887654

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=9.8e-31  Score=192.02  Aligned_cols=163  Identities=18%  Similarity=0.283  Sum_probs=124.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++.....  ....+.+.+|+.+++.++||||+++++++.+++..++++||+++++|.
T Consensus        20 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   99 (278)
T 3cok_A           20 GKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMN   99 (278)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHH
T ss_pred             cCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHH
Confidence            345678899999999999999999863211  112357889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++..... 
T Consensus       100 ~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~  165 (278)
T 3cok_A          100 RYLKNRVK--------------PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP  165 (278)
T ss_dssp             HHHHTCSS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred             HHHhhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence            99876432              589999999999999999999999999999999999999999999999999975442 


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....+++.|+|||++.+..+
T Consensus       166 ~~~~~~~~~~~~y~aPE~~~~~~~  189 (278)
T 3cok_A          166 HEKHYTLCGTPNYISPEIATRSAH  189 (278)
T ss_dssp             ------------------------
T ss_pred             CCcceeccCCCCcCCcchhcCCCC
Confidence                23567889999999887654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=2.5e-30  Score=204.52  Aligned_cols=159  Identities=21%  Similarity=0.307  Sum_probs=136.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH------------HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD------------EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL   69 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   69 (183)
                      |.-.+|.||++.+..++..+|+|++......            ...+.+.+|+.+++.++||||+++++++.+++..+++
T Consensus        45 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  124 (504)
T 3q5i_A           45 GSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLV  124 (504)
T ss_dssp             EC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            5567889999999999999999998743211            2245788999999999999999999999999999999


Q ss_pred             EeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC---ceE
Q psy2674          70 LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---SVK  146 (183)
Q Consensus        70 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~---~~k  146 (183)
                      |||+++++|.+.+....               .+++..++.++.|++.||.|||+++++||||||+||+++.++   .+|
T Consensus       125 ~e~~~gg~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~k  189 (504)
T 3q5i_A          125 TEFYEGGELFEQIINRH---------------KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIK  189 (504)
T ss_dssp             EECCTTCBHHHHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred             EecCCCCcHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEE
Confidence            99999999999887764               489999999999999999999999999999999999998665   699


Q ss_pred             EecccCCCCCCc----ccccceeeeeecccCCC
Q psy2674         147 ISLSGLSKDTYQ----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       147 i~dfg~a~~~~~----~~~~~~~~~~~pe~~~~  175 (183)
                      |+|||++.....    ....+|++|+|||++.+
T Consensus       190 l~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~  222 (504)
T 3q5i_A          190 IVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK  222 (504)
T ss_dssp             ECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT
T ss_pred             EEECCCCEEcCCCCccccccCCcCCCCHHHhcc
Confidence            999999975543    34578999999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.97  E-value=1.1e-30  Score=192.63  Aligned_cols=159  Identities=21%  Similarity=0.313  Sum_probs=136.2

Q ss_pred             CCCCCceeeeccCCCCc-------ceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDT-------SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-.++.||++.+..++       ..||+|.+..... ...+.+.+|+.+++.++||||+++++++.+++..+++|||++
T Consensus        17 g~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~   95 (289)
T 4fvq_A           17 GQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR-NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVK   95 (289)
T ss_dssp             EEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG-GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCT
T ss_pred             ccCCCceEEEEEEecccccccccchhhhhhhcccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCC
Confidence            34467888888877766       5799999864332 234578999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc--------eE
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--------VK  146 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~--------~k  146 (183)
                      +++|.+++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.        ++
T Consensus        96 ~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~k  161 (289)
T 4fvq_A           96 FGSLDTYLKKNKN--------------CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIK  161 (289)
T ss_dssp             TCBHHHHHHHTGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred             CCCHHHHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceee
Confidence            9999999987643              4889999999999999999999999999999999999988776        99


Q ss_pred             EecccCCCCCCcc-cccceeeeeecccCCC
Q psy2674         147 ISLSGLSKDTYQK-EYYKYRWVICSNIAEG  175 (183)
Q Consensus       147 i~dfg~a~~~~~~-~~~~~~~~~~pe~~~~  175 (183)
                      |+|||++...... ...++..|+|||++.+
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~y~aPE~~~~  191 (289)
T 4fvq_A          162 LSDPGISITVLPKDILQERIPWVPPECIEN  191 (289)
T ss_dssp             ECCCCSCTTTSCHHHHHHTTTTSCHHHHHC
T ss_pred             eccCcccccccCccccCCcCcccCHHHhCC
Confidence            9999999866544 4456888999999876

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.97  E-value=3.2e-30  Score=192.90  Aligned_cols=171  Identities=22%  Similarity=0.390  Sum_probs=139.8

Q ss_pred             CCCCceeeeccCC-----CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           3 LIPNARGLKASDP-----QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         3 ~~~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      .-.++.||++.+.     .++..||+|.+...........+.+|+.+++.++|+||+++++++.+++..+++|||+++++
T Consensus        35 ~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~  114 (322)
T 1p4o_A           35 QGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGD  114 (322)
T ss_dssp             ECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCB
T ss_pred             cCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCc
Confidence            3456777777654     57899999999876666667789999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.........     ......+++..++.++.|++.||.+||+++++|+||||+||+++.++.++|+|||++....
T Consensus       115 L~~~l~~~~~~~~~-----~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~  189 (322)
T 1p4o_A          115 LKSYLRSLRPAMAN-----NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY  189 (322)
T ss_dssp             HHHHHHHHHHHHHH-----CTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGG
T ss_pred             HHHHHHHhchhhcc-----CCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccc
Confidence            99999765321000     0001246889999999999999999999999999999999999999999999999998554


Q ss_pred             cc-------cccceeeeeecccCCCccc
Q psy2674         158 QK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..       ...++..|+|||++.+..+
T Consensus       190 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~  217 (322)
T 1p4o_A          190 ETDYYRKGGKGLLPVRWMSPESLKDGVF  217 (322)
T ss_dssp             GGGCEEGGGSSEECGGGCCHHHHHHCCC
T ss_pred             cccccccccCCCCCCCccChhhhccCCC
Confidence            32       2234678999999876655

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.97  E-value=1.9e-30  Score=197.79  Aligned_cols=158  Identities=21%  Similarity=0.316  Sum_probs=122.1

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------CccEEEEeeC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------DPHYLLLEYT   73 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~   73 (183)
                      +|.-++|.||++.+..+++.||+|++... ........+.+|+.+++.++||||+++++++...      ...++++|++
T Consensus        37 lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~  116 (367)
T 2fst_X           37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM  116 (367)
T ss_dssp             CC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC
T ss_pred             EeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc
Confidence            35667889999999999999999998743 4455667889999999999999999999999754      5679999998


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      + ++|.+++...                .+++..++.++.|++.||.|||++|++||||||+||+++.++.+||+|||++
T Consensus       117 ~-~~L~~~~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a  179 (367)
T 2fst_X          117 G-ADLNNIVKCQ----------------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA  179 (367)
T ss_dssp             C-EECC-----C----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC----
T ss_pred             C-CCHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccc
Confidence            4 8998887542                4899999999999999999999999999999999999999999999999999


Q ss_pred             CCCCc--ccccceeeeeecccCCC
Q psy2674         154 KDTYQ--KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       154 ~~~~~--~~~~~~~~~~~pe~~~~  175 (183)
                      +....  ....+|++|+|||++.+
T Consensus       180 ~~~~~~~~~~~~t~~y~aPE~~~~  203 (367)
T 2fst_X          180 RHTADEMTGYVATRWYRAPEIMLN  203 (367)
T ss_dssp             -----------CCCTTCCHHHHTT
T ss_pred             ccccccCCCcCcCcCccChHHHcC
Confidence            86543  35678999999999876

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=4.4e-30  Score=188.88  Aligned_cols=163  Identities=18%  Similarity=0.242  Sum_probs=138.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-----HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-----DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.+..+++.||+|++.....     ....+.+.+|+.+++.++||||+++++++.+++..++++||++++
T Consensus        14 g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   93 (283)
T 3bhy_A           14 GSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGG   93 (283)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             cccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCC
Confidence            445678999999999999999999874321     112457899999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC----ceEEecccC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL----SVKISLSGL  152 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~----~~ki~dfg~  152 (183)
                      +|.+++....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++    .++|+|||+
T Consensus        94 ~L~~~l~~~~---------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~  158 (283)
T 3bhy_A           94 ELFDFLAEKE---------------SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI  158 (283)
T ss_dssp             BHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             cHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence            9999997653               489999999999999999999999999999999999998766    899999999


Q ss_pred             CCCCCcc----cccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +......    ...+++.|+|||++.+.+++
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  189 (283)
T 3bhy_A          159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLG  189 (283)
T ss_dssp             CEECC--------CCCGGGCCHHHHTTCCCC
T ss_pred             ceeccCCCcccccCCCcCccCcceecCCCCC
Confidence            9865432    34578899999999876653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=3.6e-30  Score=192.65  Aligned_cols=161  Identities=24%  Similarity=0.364  Sum_probs=136.8

Q ss_pred             CCCCCcee----eeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--CccEEEEeeCCC
Q psy2674           2 SLIPNARG----LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~----~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--~~~~lv~e~~~~   75 (183)
                      |.-.++.|    +.+.+..+++.||+|++.........+.+.+|+++++.++||||+++++++.+.  ...+++|||+++
T Consensus        40 G~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~  119 (318)
T 3lxp_A           40 GEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL  119 (318)
T ss_dssp             EECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTT
T ss_pred             cCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccC
Confidence            34456777    556778899999999998777777778899999999999999999999999874  567899999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++...                .+++..++.++.|++.++.+||+++++|+||||+||+++.++.++|+|||++..
T Consensus       120 ~~L~~~l~~~----------------~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          120 GSLRDYLPRH----------------SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             CBHHHHGGGS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             CcHHHHHhhC----------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence            9999998654                488999999999999999999999999999999999999999999999999986


Q ss_pred             CCcc--------cccceeeeeecccCCCccc
Q psy2674         156 TYQK--------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~~--------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....        ...++..|+|||++.+..+
T Consensus       184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  214 (318)
T 3lxp_A          184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKF  214 (318)
T ss_dssp             CCTTCSEEEC---CCCCGGGCCHHHHHHCEE
T ss_pred             ccccccccccccCCCCCceeeChHHhcCCCC
Confidence            5432        2345677999999877655

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.97  E-value=2.7e-30  Score=193.43  Aligned_cols=164  Identities=23%  Similarity=0.310  Sum_probs=137.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.. .+++.||+|.+...... ..+.+.+|+.+++.++||||+++++++.+++..++++||+++++|.++
T Consensus        48 g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  125 (321)
T 2qkw_B           48 GHGVFGKVYKGVL-RDGAKVALKRRTPESSQ-GIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRH  125 (321)
T ss_dssp             CBCSSSEEEEEEC-TTCCEEEEEECCSCCSS-HHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGG
T ss_pred             ecCCCeeEEEEEE-CCCCEEEEEEecccChH-HHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHH
Confidence            5567788999986 46899999998754433 355789999999999999999999999999999999999999999988


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....           ....+++..++.++.|++.|+.|||+++++|+||||+||+++.++.+||+|||++.....   
T Consensus       126 l~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  194 (321)
T 2qkw_B          126 LYGSDL-----------PTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ  194 (321)
T ss_dssp             SSSSCC-----------CSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC
T ss_pred             HhccCC-----------CccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccc
Confidence            754321           112588999999999999999999999999999999999999999999999999875332   


Q ss_pred             ----ccccceeeeeecccCCCccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~  178 (183)
                          ....+++.|+|||++.+..+
T Consensus       195 ~~~~~~~~gt~~y~aPE~~~~~~~  218 (321)
T 2qkw_B          195 THLSTVVKGTLGYIDPEYFIKGRL  218 (321)
T ss_dssp             CCCBCCCEEETTTCCHHHHHHCBC
T ss_pred             cccccccCCCccccCHHHhcCCCC
Confidence                23457889999999876554

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.97  E-value=2.5e-30  Score=190.46  Aligned_cols=163  Identities=21%  Similarity=0.310  Sum_probs=140.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..++..||+|++....  .....+.+.+|+++++.++||||+++++++.+++..++++||+++++|.
T Consensus        23 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  102 (284)
T 2vgo_A           23 GKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY  102 (284)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred             cCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHH
Confidence            44567889999999999999999986321  1112347889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +.+....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++..... 
T Consensus       103 ~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~  167 (284)
T 2vgo_A          103 KELQKHG---------------RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL  167 (284)
T ss_dssp             HHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence            9997764               488999999999999999999999999999999999999999999999999865433 


Q ss_pred             --ccccceeeeeecccCCCcccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ....++..|+|||++.+..++
T Consensus       168 ~~~~~~~~~~y~aPE~~~~~~~~  190 (284)
T 2vgo_A          168 RRRTMCGTLDYLPPEMIEGKTHD  190 (284)
T ss_dssp             CBCCCCSCGGGCCHHHHTTCCBC
T ss_pred             ccccccCCCCcCCHHHhccCCCC
Confidence              345678999999999886653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=5.6e-31  Score=194.43  Aligned_cols=159  Identities=22%  Similarity=0.290  Sum_probs=132.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+ .+++.||+|++..... ....+.+.+|+++++.++||||+++++++.+++..+++|||++ ++|.+
T Consensus        11 g~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~   88 (288)
T 1ob3_A           11 GEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKK   88 (288)
T ss_dssp             EEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS-EEHHH
T ss_pred             ccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC-CCHHH
Confidence            3456788999988 6789999999864332 2223467899999999999999999999999999999999998 69999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      .+.....              .+++..++.++.|++.|+.|||+++++||||||+||+++.++.+||+|||++.....  
T Consensus        89 ~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  154 (288)
T 1ob3_A           89 LLDVCEG--------------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV  154 (288)
T ss_dssp             HHHTSTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred             HHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence            8876432              588999999999999999999999999999999999999999999999999874322  


Q ss_pred             ---ccccceeeeeecccCCCc
Q psy2674         159 ---KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~  176 (183)
                         ....++++|+|||++.+.
T Consensus       155 ~~~~~~~~t~~y~aPE~~~~~  175 (288)
T 1ob3_A          155 RKYTHEIVTLWYRAPDVLMGS  175 (288)
T ss_dssp             -------CCCTTCCHHHHTTC
T ss_pred             cccccccccccccCchheeCC
Confidence               234678999999998763

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.97  E-value=4.5e-30  Score=188.38  Aligned_cols=159  Identities=19%  Similarity=0.250  Sum_probs=138.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..+|+|.+...... ..+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.+.
T Consensus        18 g~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   96 (277)
T 3f3z_A           18 GRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFER   96 (277)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHH
T ss_pred             eecCCEEEEEEEeCCCCcEEEEEeehhhccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHH
Confidence            3446788999999999999999998743222 234788999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe---ccCCceEEecccCCCCCCc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~---~~~~~~ki~dfg~a~~~~~  158 (183)
                      +....               .+++..++.++.|++.|+.+||+++++|+||+|+||++   +.++.++|+|||++.....
T Consensus        97 ~~~~~---------------~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~  161 (277)
T 3f3z_A           97 VVHKR---------------VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKP  161 (277)
T ss_dssp             HHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCT
T ss_pred             HHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccC
Confidence            87664               48999999999999999999999999999999999999   7889999999999975443


Q ss_pred             ----ccccceeeeeecccCCCc
Q psy2674         159 ----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~  176 (183)
                          ....+++.|+|||++.+.
T Consensus       162 ~~~~~~~~~t~~y~aPE~~~~~  183 (277)
T 3f3z_A          162 GKMMRTKVGTPYYVSPQVLEGL  183 (277)
T ss_dssp             TSCBCCCCSCTTTCCHHHHTTC
T ss_pred             ccchhccCCCCCccChHHhccc
Confidence                245678899999998764

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.97  E-value=8.8e-30  Score=189.93  Aligned_cols=161  Identities=20%  Similarity=0.271  Sum_probs=137.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.||+|.+......   +.+.+|+.+++.++||||+++++++.+++..++++||+++++|.++
T Consensus        38 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  114 (314)
T 3com_A           38 GEGSYGSVYKAIHKETGQIVAIKQVPVESDL---QEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI  114 (314)
T ss_dssp             C----CEEEEEEETTTCCEEEEEEEETTSCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHH
T ss_pred             ccCCCeEEEEEEECCCCCEEEEEecCchHHH---HHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHH
Confidence            5567788999999999999999999754432   3688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++.....   
T Consensus       115 ~~~~~~--------------~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  180 (314)
T 3com_A          115 IRLRNK--------------TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA  180 (314)
T ss_dssp             HHHHTC--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence            875432              589999999999999999999999999999999999999999999999999975433   


Q ss_pred             --ccccceeeeeecccCCCcccc
Q psy2674         159 --KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~~~~~~  179 (183)
                        ....++..|+|||++.+..++
T Consensus       181 ~~~~~~~~~~y~aPE~~~~~~~~  203 (314)
T 3com_A          181 KRNTVIGTPFWMAPEVIQEIGYN  203 (314)
T ss_dssp             CBCCCCSCGGGCCHHHHSSSCBC
T ss_pred             ccCccCCCCCccChhhcCCCCCC
Confidence              245678899999998876553

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.97  E-value=1.1e-29  Score=189.21  Aligned_cols=166  Identities=22%  Similarity=0.264  Sum_probs=134.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC--CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH--SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++..  ..+....+.+.+|+.+++.++|+||+++++++.+++..++++||+++++|.
T Consensus        41 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~  120 (310)
T 2wqm_A           41 GRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLS  120 (310)
T ss_dssp             ECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHH
T ss_pred             cCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHH
Confidence            445678899999999999999999874  345666778899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....           ....+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++......
T Consensus       121 ~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~  189 (310)
T 2wqm_A          121 RMIKHFKK-----------QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  189 (310)
T ss_dssp             HHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred             HHHHHhcc-----------cccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence            99976432           1125889999999999999999999999999999999999999999999999998755432


Q ss_pred             -----cccceeeeeecccCCCccc
Q psy2674         160 -----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 -----~~~~~~~~~~pe~~~~~~~  178 (183)
                           ...++..|+|||++.+..+
T Consensus       190 ~~~~~~~~~~~~y~aPE~~~~~~~  213 (310)
T 2wqm_A          190 TTAAHSLVGTPYYMSPERIHENGY  213 (310)
T ss_dssp             ---------CCSSCCHHHHTTCCC
T ss_pred             CccccccCCCeeEeChHHhCCCCC
Confidence                 3457889999999887655

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=7.9e-31  Score=206.37  Aligned_cols=159  Identities=20%  Similarity=0.299  Sum_probs=137.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|.||++.+..+++.||+|++....  .....+.+.+|+.+++.++||||+++++++.+.+..++++||+.+++|.
T Consensus        35 g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~  114 (484)
T 3nyv_A           35 GKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF  114 (484)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             ecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHH
Confidence            34567889999999999999999986332  2233457899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe---ccCCceEEecccCCCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLSVKISLSGLSKDT  156 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~---~~~~~~ki~dfg~a~~~  156 (183)
                      +.+....               .+++..++.++.|++.||.|||+++++||||||+||++   +.++.+||+|||++...
T Consensus       115 ~~~~~~~---------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  179 (484)
T 3nyv_A          115 DEIISRK---------------RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF  179 (484)
T ss_dssp             HHHHTCS---------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHB
T ss_pred             HHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEc
Confidence            9887653               48999999999999999999999999999999999999   46789999999998754


Q ss_pred             Ccc----cccceeeeeecccCCC
Q psy2674         157 YQK----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       157 ~~~----~~~~~~~~~~pe~~~~  175 (183)
                      ...    ...+|++|+|||++.+
T Consensus       180 ~~~~~~~~~~gt~~y~aPE~~~~  202 (484)
T 3nyv_A          180 EASKKMKDKIGTAYYIAPEVLHG  202 (484)
T ss_dssp             CCCCSHHHHTTGGGTCCHHHHHT
T ss_pred             ccccccccCCCCccccCceeecC
Confidence            332    4567999999999876

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=4.5e-30  Score=193.35  Aligned_cols=164  Identities=21%  Similarity=0.276  Sum_probs=134.2

Q ss_pred             CCCCCceeeeccCCCC----cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQD----TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++....+    +..||+|.+...........+.+|+.+++.++||||+++++++.+.+..+++|||+++++
T Consensus        53 G~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~  132 (333)
T 1mqb_A           53 GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA  132 (333)
T ss_dssp             EECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEE
T ss_pred             ecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCc
Confidence            3456778888765443    456999999876666667789999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.||.+||+++++|+||||+||+++.++.++|+|||++....
T Consensus       133 L~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~  198 (333)
T 1mqb_A          133 LDKFLREKDG--------------EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  198 (333)
T ss_dssp             HHHHHHHTTT--------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             HHHHHHhCCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence            9999976532              58899999999999999999999999999999999999999999999999998654


Q ss_pred             ccc--------ccceeeeeecccCCCcccc
Q psy2674         158 QKE--------YYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~~--------~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...        ..++..|+|||++.+..++
T Consensus       199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  228 (333)
T 1mqb_A          199 DDPEATYTTSGGKIPIRWTAPEAISYRKFT  228 (333)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCC
T ss_pred             cccccccccCCCCccccccCchhcccCCCC
Confidence            321        2235679999998776653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.97  E-value=7.9e-30  Score=191.94  Aligned_cols=177  Identities=21%  Similarity=0.364  Sum_probs=138.9

Q ss_pred             CCCCCceeeeccCC-------CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKASDP-------QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |.-.++.||++.+.       .++..||+|++.........+.+.+|+.+++.+ +||||+++++++.+++..++++||+
T Consensus        44 G~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~  123 (334)
T 2pvf_A           44 GEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA  123 (334)
T ss_dssp             EECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECC
T ss_pred             eecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECC
Confidence            34567788888654       578899999998766777777899999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSG-SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++++|.+++............ ........+++..++.++.|++.||.|||+++++|+||||+||+++.++.+||+|||+
T Consensus       124 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~  203 (334)
T 2pvf_A          124 SKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL  203 (334)
T ss_dssp             TTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             CCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccc
Confidence            999999999875431111100 0111223488899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc-------cccceeeeeecccCCCccc
Q psy2674         153 SKDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       153 a~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      +......       ...++..|+|||++.+..+
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  236 (334)
T 2pvf_A          204 ARDINNIDYYKKTTNGRLPVKWMAPEALFDRVY  236 (334)
T ss_dssp             CEECTTTSSEECCSCCCCCGGGCCHHHHHHCEE
T ss_pred             cccccccccccccCCCCcccceeChHHhcCCCc
Confidence            9755432       2234567999999876554

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.97  E-value=1.9e-30  Score=190.22  Aligned_cols=162  Identities=17%  Similarity=0.248  Sum_probs=134.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||.+.+..+++.||+|++....  .....+.+.+|+..++.++||||+++++++.+++..++++||+++++|.
T Consensus        20 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   99 (276)
T 2h6d_A           20 GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELF   99 (276)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred             cCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHH
Confidence            34567889999999999999999986321  1123457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++......
T Consensus       100 ~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~  164 (276)
T 2h6d_A          100 DYICKHG---------------RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG  164 (276)
T ss_dssp             HHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred             HHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence            9997764               4889999999999999999999999999999999999999999999999999865543


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...+++.|+|||++.+..+
T Consensus       165 ~~~~~~~~~~~y~aPE~~~~~~~  187 (276)
T 2h6d_A          165 EFLRTSCGSPNYAAPEVISGRLY  187 (276)
T ss_dssp             ------------CCTGGGTTSCC
T ss_pred             cceecccCCccccCHHHHcCCCC
Confidence                3456889999999987654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=1.3e-30  Score=195.97  Aligned_cols=160  Identities=21%  Similarity=0.303  Sum_probs=129.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++.... .......+.+|+++++.++||||+++++++.+++..+++|||++ ++|.+
T Consensus        43 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~  121 (329)
T 3gbz_A           43 GEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKK  121 (329)
T ss_dssp             EECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHH
T ss_pred             EecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-CCHHH
Confidence            44567899999999999999999997443 33344567899999999999999999999999999999999998 69999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe-----ccCCceEEecccCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI-----SSDLSVKISLSGLSKD  155 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~-----~~~~~~ki~dfg~a~~  155 (183)
                      ++....               .+++..++.++.|++.||.|||+++++||||||+||++     +..+.+||+|||++..
T Consensus       122 ~~~~~~---------------~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          122 YMDKNP---------------DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             HHHHCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred             HHhhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence            997664               48999999999999999999999999999999999999     4556699999999874


Q ss_pred             CCc-----ccccceeeeeecccCCCcc
Q psy2674         156 TYQ-----KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       156 ~~~-----~~~~~~~~~~~pe~~~~~~  177 (183)
                      ...     ....++..|+|||++.+..
T Consensus       187 ~~~~~~~~~~~~~t~~y~aPE~~~~~~  213 (329)
T 3gbz_A          187 FGIPIRQFTHEIITLWYRPPEILLGSR  213 (329)
T ss_dssp             HC-----------CCTTCCHHHHTTCC
T ss_pred             cCCcccccCCCcCCccccCHHHhcCCC
Confidence            322     2445689999999987643

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.97  E-value=5.7e-30  Score=188.38  Aligned_cols=160  Identities=23%  Similarity=0.307  Sum_probs=134.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||.+... ++..||+|++.......  +.+.+|+++++.++|+||+++++++.+++..+++|||+++++|.++
T Consensus        33 g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  109 (283)
T 3gen_A           33 GTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSE--DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY  109 (283)
T ss_dssp             C---CEEEEEEEET-TTEEEEEEEECTTSBCH--HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHH
T ss_pred             CCCCCceEEEEEEc-CCCeEEEEEecCCCCCH--HHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHH
Confidence            55567888888665 67789999998543322  3688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..++.++.|++.++.+||+++++|+||||+||+++.++.++|+|||++......  
T Consensus       110 l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~  175 (283)
T 3gen_A          110 LREMRH--------------RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY  175 (283)
T ss_dssp             HHCGGG--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred             HHHhcc--------------CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence            976432              5899999999999999999999999999999999999999999999999999855432  


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++..|+|||++.+..+
T Consensus       176 ~~~~~~~~~~~y~aPE~~~~~~~  198 (283)
T 3gen_A          176 TSSVGSKFPVRWSPPEVLMYSKF  198 (283)
T ss_dssp             HSTTSTTSCGGGCCHHHHHHCCC
T ss_pred             ccccCCccCcccCCHHHhccCCC
Confidence                2334567999999876555

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.97  E-value=1.7e-29  Score=186.52  Aligned_cols=160  Identities=19%  Similarity=0.219  Sum_probs=138.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec----CCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD----GDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~   76 (183)
                      |.-.+|.||++.+..++..||+|.+.. .......+.+.+|+.+++.++||||+++++++..    ....++++||++++
T Consensus        35 g~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~  114 (290)
T 1t4h_A           35 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSG  114 (290)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSC
T ss_pred             cCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCC
Confidence            445678999999999999999999874 3456667789999999999999999999999875    34589999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ceecccccceeEec-cCCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLIS-SDLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--ivH~di~~~nil~~-~~~~~ki~dfg~a  153 (183)
                      +|.+++....               .+++..++.++.|++.|+.|||+++  ++|+||+|+||+++ .++.++|+|||++
T Consensus       115 ~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          115 TLKTYLKRFK---------------VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  179 (290)
T ss_dssp             BHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             CHHHHHHHcc---------------CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCc
Confidence            9999998763               4889999999999999999999999  99999999999997 7899999999999


Q ss_pred             CCCCcc---cccceeeeeecccCCCc
Q psy2674         154 KDTYQK---EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       154 ~~~~~~---~~~~~~~~~~pe~~~~~  176 (183)
                      ......   ...+++.|+|||++.+.
T Consensus       180 ~~~~~~~~~~~~~t~~y~aPE~~~~~  205 (290)
T 1t4h_A          180 TLKRASFAKAVIGTPEFMAPEMYEEK  205 (290)
T ss_dssp             GGCCTTSBEESCSSCCCCCGGGGGTC
T ss_pred             ccccccccccccCCcCcCCHHHHhcc
Confidence            754433   45678999999998753

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.97  E-value=2e-29  Score=185.78  Aligned_cols=158  Identities=23%  Similarity=0.354  Sum_probs=133.8

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCC---HHHH---HHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKD---DEAL---HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~---~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      +|.-.++.||++.+..+++.||+|.+.....   ....   +.+.+|+++++.++||||+++++++.++.  +++|||++
T Consensus        27 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~  104 (287)
T 4f0f_A           27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVP  104 (287)
T ss_dssp             CCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCT
T ss_pred             cccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecC
Confidence            3566788999999999999999999864322   2211   57889999999999999999999986554  79999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ceecccccceeEeccCCc-----eEE
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLS-----VKI  147 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--ivH~di~~~nil~~~~~~-----~ki  147 (183)
                      +++|.+.+.....              .+++..++.++.|++.|+.|||+++  ++|+||||+||+++.++.     ++|
T Consensus       105 ~~~L~~~l~~~~~--------------~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl  170 (287)
T 4f0f_A          105 CGDLYHRLLDKAH--------------PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKV  170 (287)
T ss_dssp             TCBHHHHHHCTTS--------------CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred             CCCHHHHHhcccC--------------CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEe
Confidence            9999988865432              5899999999999999999999999  999999999999987766     999


Q ss_pred             ecccCCCCCCcc--cccceeeeeecccCC
Q psy2674         148 SLSGLSKDTYQK--EYYKYRWVICSNIAE  174 (183)
Q Consensus       148 ~dfg~a~~~~~~--~~~~~~~~~~pe~~~  174 (183)
                      +|||++......  ...+++.|+|||++.
T Consensus       171 ~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~  199 (287)
T 4f0f_A          171 ADFGLSQQSVHSVSGLLGNFQWMAPETIG  199 (287)
T ss_dssp             CCCTTCBCCSSCEECCCCCCTTSCGGGSS
T ss_pred             CCCCccccccccccccCCCccccCchhhc
Confidence            999999855443  466789999999984

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.97  E-value=4.3e-30  Score=187.65  Aligned_cols=160  Identities=26%  Similarity=0.346  Sum_probs=134.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++... ++..||+|++......  .+.+.+|++.++.++||||+++++++.+++..+++|||+++++|.++
T Consensus        17 g~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   93 (268)
T 3sxs_A           17 GSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY   93 (268)
T ss_dssp             EEETTEEEEEEEET-TTEEEEEEEECBTTBC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHH
T ss_pred             ccCCCceEEEEEec-CceeEEEEEeccCCCc--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHH
Confidence            33467788888655 5677999999754332  23688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....              .+++..++.++.|++.|+.+||+++++|+||||+||+++.++.++|+|||++....... 
T Consensus        94 l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  159 (268)
T 3sxs_A           94 LRSHGK--------------GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY  159 (268)
T ss_dssp             HHHHGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE
T ss_pred             HHHcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhh
Confidence            987643              58999999999999999999999999999999999999999999999999997554432 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||++.+..+
T Consensus       160 ~~~~~~~~~~~y~aPE~~~~~~~  182 (268)
T 3sxs_A          160 VSSVGTKFPVKWSAPEVFHYFKY  182 (268)
T ss_dssp             EECCSCCCCGGGCCHHHHHHSEE
T ss_pred             hcccCCCcCcccCCHHHHhccCC
Confidence                 223456999999876544

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=4.5e-30  Score=195.42  Aligned_cols=157  Identities=21%  Similarity=0.315  Sum_probs=137.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC-----CccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG-----DPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~   76 (183)
                      |.-.+|.||++.+..++..||+|++.........+.+.+|+++++.++||||+++++++..+     ...++++|+++ +
T Consensus        36 G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~-~  114 (364)
T 3qyz_A           36 GEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLME-T  114 (364)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCS-E
T ss_pred             ecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccC-c
Confidence            44567899999999999999999998766677777899999999999999999999999764     36899999998 6


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++...                .+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||++...
T Consensus       115 ~L~~~l~~~----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  178 (364)
T 3qyz_A          115 DLYKLLKTQ----------------HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA  178 (364)
T ss_dssp             EHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             CHHHHHHhC----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence            999988654                4889999999999999999999999999999999999999999999999999855


Q ss_pred             Ccc--------cccceeeeeecccCCC
Q psy2674         157 YQK--------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       157 ~~~--------~~~~~~~~~~pe~~~~  175 (183)
                      ...        ...+|++|+|||++.+
T Consensus       179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~  205 (364)
T 3qyz_A          179 DPDHDHTGFLTEYVATRWYRAPEIMLN  205 (364)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCHHHHHT
T ss_pred             CCCCCccccccccccccCCCCCHHhcC
Confidence            432        3477999999998644

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=6.8e-30  Score=194.61  Aligned_cols=159  Identities=14%  Similarity=0.248  Sum_probs=138.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC---C----HHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK---D----DEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |....|.||+|.+..+|+.||+|++....   .    ....+.+.+|+.+++.+ +||||+++++++...+..+++|||+
T Consensus       103 g~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~  182 (365)
T 2y7j_A          103 GRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM  182 (365)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCC
T ss_pred             ecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeC
Confidence            44567899999999999999999986432   1    22345778999999999 8999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      ++++|.+++....               .+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||++
T Consensus       183 ~g~~L~~~l~~~~---------------~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~  247 (365)
T 2y7j_A          183 RKGELFDYLTEKV---------------ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFS  247 (365)
T ss_dssp             TTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred             CCCcHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcc
Confidence            9999999997653               4899999999999999999999999999999999999999999999999998


Q ss_pred             CCCCc----ccccceeeeeecccCCC
Q psy2674         154 KDTYQ----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       154 ~~~~~----~~~~~~~~~~~pe~~~~  175 (183)
                      .....    ....+++.|+|||++.+
T Consensus       248 ~~~~~~~~~~~~~gt~~y~aPE~~~~  273 (365)
T 2y7j_A          248 CHLEPGEKLRELCGTPGYLAPEILKC  273 (365)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHH
T ss_pred             cccCCCcccccCCCCCCccChhhccc
Confidence            75543    24567899999999753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=7.1e-30  Score=193.32  Aligned_cols=161  Identities=22%  Similarity=0.305  Sum_probs=134.7

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC--------CccEEEEe
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDG--------DPHYLLLE   71 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--------~~~~lv~e   71 (183)
                      +|.-.+|.||++.+..+++.||+|++.... .......+.+|+.+++.++||||+++++++.+.        +..+++||
T Consensus        25 lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e  104 (351)
T 3mi9_A           25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFD  104 (351)
T ss_dssp             CSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEE
T ss_pred             EecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEe
Confidence            366678899999999999999999986332 222234678999999999999999999999863        45899999


Q ss_pred             eCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEeccc
Q psy2674          72 YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG  151 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg  151 (183)
                      |++ ++|.+.+.....              .+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||
T Consensus       105 ~~~-~~l~~~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  169 (351)
T 3mi9_A          105 FCE-HDLAGLLSNVLV--------------KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFG  169 (351)
T ss_dssp             CCS-EEHHHHHHCTTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred             ccC-CCHHHHHhhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccch
Confidence            998 688887765432              58999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCc---------ccccceeeeeecccCCCc
Q psy2674         152 LSKDTYQ---------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       152 ~a~~~~~---------~~~~~~~~~~~pe~~~~~  176 (183)
                      ++.....         ....++++|+|||++.+.
T Consensus       170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  203 (351)
T 3mi9_A          170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE  203 (351)
T ss_dssp             TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC
T ss_pred             hcccccccccccccccCCcccccCccCchhhcCC
Confidence            9874331         234568999999998763

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.97  E-value=7.5e-30  Score=191.51  Aligned_cols=162  Identities=25%  Similarity=0.315  Sum_probs=137.2

Q ss_pred             CCCCCceeeecc----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKAS----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~   75 (183)
                      |.-.++.||++.    +..+++.||+|++... .....+.+.+|+++++.++|+||+++++++..  ....+++|||+++
T Consensus        32 g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~  110 (327)
T 3lxl_A           32 GKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPS  110 (327)
T ss_dssp             EEETTEEEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTT
T ss_pred             cCCCCeEEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCC
Confidence            334677888887    7889999999998754 34455679999999999999999999999874  4568899999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++.....              .+++..++.++.|++.||.+||+++++|+||||+||+++.++.++|+|||++..
T Consensus       111 ~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A          111 GCLRDFLQRHRA--------------RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL  176 (327)
T ss_dssp             CBHHHHHHHHGG--------------GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEE
T ss_pred             CCHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccccee
Confidence            999999987543              489999999999999999999999999999999999999999999999999985


Q ss_pred             CCcc--------cccceeeeeecccCCCccc
Q psy2674         156 TYQK--------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~~--------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....        ...++..|+|||++.+..+
T Consensus       177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  207 (327)
T 3lxl_A          177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIF  207 (327)
T ss_dssp             CCTTCSEEECSSCCCSCGGGSCHHHHHHCEE
T ss_pred             cccCCccceeeccCCccccccCHHHhccCCC
Confidence            5332        2345677999999876654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.97  E-value=3.9e-30  Score=189.61  Aligned_cols=162  Identities=22%  Similarity=0.348  Sum_probs=139.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..||+|.+.....  ..+.+.+|+++++.++||||+++++++.+++..++++||+++++|.++
T Consensus        22 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~   99 (288)
T 3kfa_A           22 GGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY   99 (288)
T ss_dssp             GGGTTCSEEEEEEGGGTEEEEEEEECSCST--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHH
T ss_pred             CCCCceeEEEeEecCCCEEEEEEecCcCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHH
Confidence            455778899999999999999999875433  345789999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++....... 
T Consensus       100 ~~~~~~-------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  166 (288)
T 3kfa_A          100 LRECNR-------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY  166 (288)
T ss_dssp             HHHCCT-------------TTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred             HHhccc-------------CCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence            976532             258899999999999999999999999999999999999999999999999998655432 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||++.+..+
T Consensus       167 ~~~~~~~~~~~y~aPE~~~~~~~  189 (288)
T 3kfa_A          167 TAHAGAKFPIKWTAPESLAYNKF  189 (288)
T ss_dssp             EEETTEEECGGGCCHHHHHHCCC
T ss_pred             ccccCCccccCcCChhhhccCCC
Confidence                 233567999999876554

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=7e-30  Score=188.40  Aligned_cols=162  Identities=23%  Similarity=0.332  Sum_probs=136.7

Q ss_pred             CCCCCceeeeccC--CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASD--PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++..  ..++..||+|++.........+.+.+|+++++.++||||+++++++. .+..++++|++++++|.
T Consensus        19 g~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~   97 (287)
T 1u59_A           19 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLH   97 (287)
T ss_dssp             ECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTTEEHH
T ss_pred             cccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEEEEeCCCCCHH
Confidence            4556788998863  45788999999987767777788999999999999999999999994 56789999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++......
T Consensus        98 ~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~  163 (287)
T 1u59_A           98 KFLVGKRE--------------EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  163 (287)
T ss_dssp             HHHTTCTT--------------TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             HHHHhCCc--------------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence            99864322              5889999999999999999999999999999999999999999999999999855332


Q ss_pred             --------cccceeeeeecccCCCccc
Q psy2674         160 --------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 --------~~~~~~~~~~pe~~~~~~~  178 (183)
                              ...++..|+|||++.+..+
T Consensus       164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~  190 (287)
T 1u59_A          164 DSYYTARSAGKWPLKWYAPECINFRKF  190 (287)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEE
T ss_pred             cceeeccccccccccccCHHHhccCCC
Confidence                    1233677999999876554

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.97  E-value=5.3e-30  Score=189.83  Aligned_cols=164  Identities=22%  Similarity=0.355  Sum_probs=136.1

Q ss_pred             CCCCCceeeeccCC---CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEe-cCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDP---QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICR-DGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~lv~e~~~~~~   77 (183)
                      |.-.+|.||++...   .....+|+|.+.........+.+.+|+.+++.++||||+++++++. .++..++++||+++++
T Consensus        34 g~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~  113 (298)
T 3f66_A           34 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGD  113 (298)
T ss_dssp             EEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCB
T ss_pred             eecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCC
Confidence            34467788888743   3445689999987777777788999999999999999999999865 4567899999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.|+.+||+++++|+||||+||+++.++.++|+|||++....
T Consensus       114 L~~~l~~~~~--------------~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~  179 (298)
T 3f66_A          114 LRNFIRNETH--------------NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  179 (298)
T ss_dssp             HHHHHHCTTC--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred             HHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECccccccccc
Confidence            9999975432              57889999999999999999999999999999999999999999999999998654


Q ss_pred             cc---------cccceeeeeecccCCCcccc
Q psy2674         158 QK---------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~---------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..         ...+++.|+|||++.+..++
T Consensus       180 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  210 (298)
T 3f66_A          180 DKEYYSVHNKTGAKLPVKWMALESLQTQKFT  210 (298)
T ss_dssp             CGGGCBC-----CCBCGGGSCHHHHHHCCCC
T ss_pred             ccchhccccccCCCCCccccChHHhcCCCCC
Confidence            32         23345679999998776553

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.96  E-value=3.6e-30  Score=193.52  Aligned_cols=176  Identities=22%  Similarity=0.292  Sum_probs=140.5

Q ss_pred             CCCCCceeeeccCCCCcc-----eEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTS-----VLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |.-.++.||++.+..++.     .||+|.+.........+.+.+|+.+++.+ +||||+++++++.+++..+++|||+++
T Consensus        55 G~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~  134 (333)
T 2i1m_A           55 GAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCY  134 (333)
T ss_dssp             EECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             ccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCC
Confidence            345678888888766554     89999998777777777899999999999 899999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++.......... .........+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||++..
T Consensus       135 g~L~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~  213 (333)
T 2i1m_A          135 GDLLNFLRRKSRVLETD-PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD  213 (333)
T ss_dssp             EEHHHHHHHHHHHHSCC--------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCC
T ss_pred             CcHHHHHHHhccccccc-ccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccc
Confidence            99999997753210000 00000113578999999999999999999999999999999999999999999999999985


Q ss_pred             CCcc-------cccceeeeeecccCCCccc
Q psy2674         156 TYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....       ...++..|+|||++.+..+
T Consensus       214 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  243 (333)
T 2i1m_A          214 IMNDSNYIVKGNARLPVKWMAPESIFDCVY  243 (333)
T ss_dssp             GGGCTTSEECSSCEECGGGSCHHHHHHCCC
T ss_pred             cccccceeecCCCCCCccccCHHHhccCCC
Confidence            4332       2334567999998876554

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.96  E-value=1.2e-30  Score=197.13  Aligned_cols=157  Identities=16%  Similarity=0.259  Sum_probs=133.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++.....     ...+|++++..+ +||||+++++++.+++..+++|||+++++|.+
T Consensus        31 G~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~  105 (342)
T 2qr7_A           31 GVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLD  105 (342)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             eeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHH
Confidence            445778999999999999999999975432     234678888777 89999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC----CceEEecccCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD----LSVKISLSGLSKDT  156 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~----~~~ki~dfg~a~~~  156 (183)
                      .+....               .+++..++.++.|++.||.|||++|++||||||+||++...    +.+||+|||++...
T Consensus       106 ~i~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A          106 KILRQK---------------FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             HHHTCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred             HHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence            987653               48999999999999999999999999999999999998432    35999999999854


Q ss_pred             Cc-----ccccceeeeeecccCCCccc
Q psy2674         157 YQ-----KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~-----~~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..     ...++|+.|+|||++.+.+|
T Consensus       171 ~~~~~~~~~~~gt~~y~aPE~~~~~~~  197 (342)
T 2qr7_A          171 RAENGLLMTPCYTANFVAPEVLERQGY  197 (342)
T ss_dssp             BCTTCCBCCSSCCSSCCCHHHHHHHHH
T ss_pred             cCCCCceeccCCCccccCHHHhcCCCC
Confidence            33     24567899999999877655

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=3.6e-30  Score=194.74  Aligned_cols=160  Identities=19%  Similarity=0.265  Sum_probs=133.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH----HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD----EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++.+..+++.||+|++......    ...+.+.+|+++++.++||||+++++++.+++..++++||++ ++
T Consensus        19 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~   97 (346)
T 1ua2_A           19 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TD   97 (346)
T ss_dssp             EEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCS-EE
T ss_pred             eecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCC-CC
Confidence            3456788999999999999999998743221    122467899999999999999999999999999999999998 58


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++....
T Consensus        98 l~~~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~  163 (346)
T 1ua2_A           98 LEVIIKDNSL--------------VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  163 (346)
T ss_dssp             HHHHHTTCCS--------------SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             HHHHHHhcCc--------------CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence            8888865432              57888999999999999999999999999999999999999999999999998653


Q ss_pred             c-----ccccceeeeeecccCCCc
Q psy2674         158 Q-----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       158 ~-----~~~~~~~~~~~pe~~~~~  176 (183)
                      .     ....+|++|+|||++.+.
T Consensus       164 ~~~~~~~~~~~t~~y~aPE~~~~~  187 (346)
T 1ua2_A          164 SPNRAYTHQVVTRWYRAPELLFGA  187 (346)
T ss_dssp             SCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred             CCcccCCcccccccccCchHhhCC
Confidence            3     235678999999998663

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.96  E-value=6.5e-30  Score=190.30  Aligned_cols=164  Identities=21%  Similarity=0.306  Sum_probs=134.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC----CHHHHHHHHHHHHHHhcC---CCcceeeEEeEEecCC-----ccEEE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK----DDEALHEFKREIDLFCKL---DHAHVVKMIGICRDGD-----PHYLL   69 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~~~-----~~~lv   69 (183)
                      |.-.++.||++.+..+++.||+|++....    .......+.+|+.+++.+   +||||+++++++....     ..+++
T Consensus        18 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv   97 (308)
T 3g33_A           18 GVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLV   97 (308)
T ss_dssp             CCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEE
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEE
Confidence            56678899999999999999999986321    111122456677776666   5999999999998755     47899


Q ss_pred             EeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEec
Q psy2674          70 LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISL  149 (183)
Q Consensus        70 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~d  149 (183)
                      +|+++ ++|.+++.....             ..+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|
T Consensus        98 ~e~~~-~~L~~~~~~~~~-------------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~D  163 (308)
T 3g33_A           98 FEHVD-QDLRTYLDKAPP-------------PGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLAD  163 (308)
T ss_dssp             EECCC-CBHHHHHHTCCT-------------TCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECS
T ss_pred             ehhhh-cCHHHHHhhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEee
Confidence            99998 799999976532             2489999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCc----ccccceeeeeecccCCCcccc
Q psy2674         150 SGLSKDTYQ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       150 fg~a~~~~~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ||++.....    ....+|++|+|||++.+..|+
T Consensus       164 fg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  197 (308)
T 3g33_A          164 FGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYA  197 (308)
T ss_dssp             CSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCC
T ss_pred             CccccccCCCcccCCccccccccCchHHcCCCCC
Confidence            999985543    345679999999998776653

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.96  E-value=1.3e-29  Score=190.22  Aligned_cols=169  Identities=24%  Similarity=0.335  Sum_probs=136.1

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.     +..++..||+|.+...........+.+|+.+++.++||||+++++++.+++..+++|||++++
T Consensus        39 g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  118 (327)
T 2yfx_A           39 GHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGG  118 (327)
T ss_dssp             C--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTE
T ss_pred             cCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCC
Confidence            455677888887     567889999999986666666778999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec---cCCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~---~~~~~ki~dfg~a  153 (183)
                      +|.+++.......        .....+++..++.++.|++.|+.+||+++++|+||+|+||+++   .+..++|+|||++
T Consensus       119 ~L~~~l~~~~~~~--------~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~  190 (327)
T 2yfx_A          119 DLKSFLRETRPRP--------SQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA  190 (327)
T ss_dssp             EHHHHHHHTSCCS--------SSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHH
T ss_pred             cHHHHHHhhcccc--------cccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccc
Confidence            9999998764311        0112488899999999999999999999999999999999998   4556999999998


Q ss_pred             CCCCc-------ccccceeeeeecccCCCccc
Q psy2674         154 KDTYQ-------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       154 ~~~~~-------~~~~~~~~~~~pe~~~~~~~  178 (183)
                      .....       ....++..|+|||++.+..+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  222 (327)
T 2yfx_A          191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF  222 (327)
T ss_dssp             HHHHC------CCGGGSCGGGCCHHHHHHCCC
T ss_pred             cccccccccccCCCcCCCcceeCHhHhcCCCC
Confidence            63221       23455778999999876555

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.96  E-value=1.2e-29  Score=186.48  Aligned_cols=162  Identities=22%  Similarity=0.294  Sum_probs=135.6

Q ss_pred             CCCCCceeeecc---CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKAS---DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~---~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.   ...++..||+|.+.........+.+.+|+.+++.++||||+++++++.+ +..++++||+++++|
T Consensus        21 g~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L   99 (281)
T 3cc6_A           21 GEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGEL   99 (281)
T ss_dssp             EECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTTCBH
T ss_pred             EecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCCCCH
Confidence            344677888876   3445678999999876666677789999999999999999999999865 467899999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++.....
T Consensus       100 ~~~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  165 (281)
T 3cc6_A          100 GHYLERNKN--------------SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIED  165 (281)
T ss_dssp             HHHHHHHTT--------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred             HHHHHhccc--------------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence            999976542              588999999999999999999999999999999999999999999999999986544


Q ss_pred             c------cccceeeeeecccCCCccc
Q psy2674         159 K------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~------~~~~~~~~~~pe~~~~~~~  178 (183)
                      .      ...++..|+|||++.+..+
T Consensus       166 ~~~~~~~~~~~~~~y~aPE~~~~~~~  191 (281)
T 3cc6_A          166 EDYYKASVTRLPIKWMSPESINFRRF  191 (281)
T ss_dssp             -------CCCCCGGGCCHHHHHHCCC
T ss_pred             ccccccccCCCCcceeCchhhccCCC
Confidence            3      2334667999999876655

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=4.1e-30  Score=196.36  Aligned_cols=163  Identities=22%  Similarity=0.359  Sum_probs=129.2

Q ss_pred             CCCCCceeeeccCC---CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec-CCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDP---QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD-GDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~   77 (183)
                      |.-.+|.||++...   ..+..||+|.+....+....+.+.+|+.+++.++||||+++++++.+ ++..+++|||+++++
T Consensus        98 G~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~  177 (373)
T 3c1x_A           98 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGD  177 (373)
T ss_dssp             ECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCB
T ss_pred             eeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCC
Confidence            44567888887753   33567899998866666667789999999999999999999998754 567899999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.|+.|||+++++||||||+||+++.++.+||+|||+++...
T Consensus       178 L~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~  243 (373)
T 3c1x_A          178 LRNFIRNETH--------------NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  243 (373)
T ss_dssp             HHHHHHCTTC--------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             HHHHHhhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccc
Confidence            9999975432              57888999999999999999999999999999999999999999999999998543


Q ss_pred             cc---------cccceeeeeecccCCCccc
Q psy2674         158 QK---------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~---------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..         ...++..|+|||++.+..+
T Consensus       244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  273 (373)
T 3c1x_A          244 DKEFDSVHNKTGAKLPVKWMALESLQTQKF  273 (373)
T ss_dssp             --------------CCGGGSCHHHHHHCCC
T ss_pred             ccccccccccCCCCCcccccChHHhcCCCC
Confidence            32         2234567999999877655

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.96  E-value=6.9e-30  Score=191.48  Aligned_cols=154  Identities=20%  Similarity=0.269  Sum_probs=130.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc----cEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP----HYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e~~~~~~   77 (183)
                      |.-.++.||++...  ++.||+|++....  .......+|+..++.++||||+++++++.++..    .+++|||+++++
T Consensus        33 g~G~~g~Vy~~~~~--~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~  108 (322)
T 3soc_A           33 ARGRFGCVWKAQLL--NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGS  108 (322)
T ss_dssp             ECSTTCEEEEEEET--TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred             cccCceEEEEEEEC--CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCC
Confidence            45567889988654  7899999986432  223356679999999999999999999987543    699999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------CceecccccceeEeccCCceEE
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK----------RLIHKDIAARNCLISSDLSVKI  147 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~----------~ivH~di~~~nil~~~~~~~ki  147 (183)
                      |.+++...                .+++..++.++.|++.|+.|||+.          +++||||||+||+++.++.+||
T Consensus       109 L~~~l~~~----------------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL  172 (322)
T 3soc_A          109 LSDFLKAN----------------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACI  172 (322)
T ss_dssp             HHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEE
T ss_pred             HHHHHHhc----------------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEE
Confidence            99999654                488999999999999999999999          9999999999999999999999


Q ss_pred             ecccCCCCCCc-------ccccceeeeeecccCCC
Q psy2674         148 SLSGLSKDTYQ-------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       148 ~dfg~a~~~~~-------~~~~~~~~~~~pe~~~~  175 (183)
                      +|||++.....       ....+|+.|+|||++.+
T Consensus       173 ~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  207 (322)
T 3soc_A          173 ADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG  207 (322)
T ss_dssp             CCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTT
T ss_pred             ccCCcccccccccCccccccCccCccccCHhhccc
Confidence            99999964322       23567899999999987

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.96  E-value=2.2e-30  Score=200.60  Aligned_cols=158  Identities=18%  Similarity=0.271  Sum_probs=126.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-------CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-------DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-.+|.||++.+..+++.||+|++....       .......+.+|+.+++.++||||+++++++.. +..+++|||++
T Consensus       144 G~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~~~  222 (419)
T 3i6u_A          144 GSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELME  222 (419)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEECCT
T ss_pred             eeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEcCC
Confidence            44578899999999999999999986421       12223357899999999999999999999865 45789999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC---CceEEeccc
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD---LSVKISLSG  151 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~---~~~ki~dfg  151 (183)
                      +++|.+.+....               .+++..++.++.|++.||.|||+++++||||||+||+++..   ..+||+|||
T Consensus       223 ~g~L~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG  287 (419)
T 3i6u_A          223 GGELFDKVVGNK---------------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  287 (419)
T ss_dssp             TCBGGGGTSSSC---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred             CCcHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecc
Confidence            999988775442               58999999999999999999999999999999999999644   459999999


Q ss_pred             CCCCCCcc----cccceeeeeecccCCC
Q psy2674         152 LSKDTYQK----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       152 ~a~~~~~~----~~~~~~~~~~pe~~~~  175 (183)
                      ++......    ...+|+.|+|||++.+
T Consensus       288 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~  315 (419)
T 3i6u_A          288 HSKILGETSLMRTLCGTPTYLAPEVLVS  315 (419)
T ss_dssp             TTTSCC-----------CTTCCTTTTC-
T ss_pred             cceecCCCccccccCCCCCccCceeeec
Confidence            99865543    4567999999999864

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=1.4e-30  Score=196.53  Aligned_cols=174  Identities=19%  Similarity=0.225  Sum_probs=134.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC----CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS----KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++.+..+++.||+|++...    ......+.+.+|+.+++.++||||+++++++.+++..+++|||+++++
T Consensus        35 G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~  114 (345)
T 3hko_A           35 GQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGH  114 (345)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred             eecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCc
Confidence            4456788999999999999999998632    133445688999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCC-------------------------CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy2674          78 LKQFLLATRKDSKDK-------------------------SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI  132 (183)
Q Consensus        78 L~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di  132 (183)
                      |.+++..........                         ..........+++..++.++.|++.|+.|||+++++|+||
T Consensus       115 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl  194 (345)
T 3hko_A          115 LLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDI  194 (345)
T ss_dssp             HHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred             HHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCC
Confidence            999885322110000                         0000000112456788899999999999999999999999


Q ss_pred             ccceeEeccCC--ceEEecccCCCCCCc---------ccccceeeeeecccCCC
Q psy2674         133 AARNCLISSDL--SVKISLSGLSKDTYQ---------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       133 ~~~nil~~~~~--~~ki~dfg~a~~~~~---------~~~~~~~~~~~pe~~~~  175 (183)
                      ||+||+++.++  .+||+|||++.....         ....+++.|+|||++.+
T Consensus       195 kp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  248 (345)
T 3hko_A          195 KPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNT  248 (345)
T ss_dssp             CGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTC
T ss_pred             ChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhcc
Confidence            99999998665  899999999974322         24567889999999865

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.96  E-value=3.3e-30  Score=198.29  Aligned_cols=162  Identities=17%  Similarity=0.263  Sum_probs=137.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC--ccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD--PHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++.........+.+.+|+++++.++||||+++++++.+.+  ..+++|||+++++|.
T Consensus        18 G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~   97 (396)
T 4eut_A           18 GQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLY   97 (396)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHH
T ss_pred             EcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHH
Confidence            455788999999999999999999975443333457789999999999999999999998755  679999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe----ccCCceEEecccCCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI----SSDLSVKISLSGLSKD  155 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~----~~~~~~ki~dfg~a~~  155 (183)
                      +++......            ..+++..++.++.|++.||.|||+++++||||||+||++    +..+.+||+|||++..
T Consensus        98 ~~l~~~~~~------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~  165 (396)
T 4eut_A           98 TVLEEPSNA------------YGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE  165 (396)
T ss_dssp             HHTTSGGGT------------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred             HHHHhhhcc------------cCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence            998765321            138999999999999999999999999999999999999    7778899999999986


Q ss_pred             CCcc----cccceeeeeecccCCC
Q psy2674         156 TYQK----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       156 ~~~~----~~~~~~~~~~pe~~~~  175 (183)
                      ....    ...+++.|+|||++.+
T Consensus       166 ~~~~~~~~~~~gt~~y~aPE~~~~  189 (396)
T 4eut_A          166 LEDDEQFVSLYGTEEYLHPDMYER  189 (396)
T ss_dssp             CCCGGGSSCSSSCCTTCCHHHHHH
T ss_pred             ccCCCccccccCCccccCHHHhhc
Confidence            5443    3567899999999764

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=6.5e-30  Score=190.63  Aligned_cols=177  Identities=21%  Similarity=0.347  Sum_probs=139.5

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCC-ccEEEEeeCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGD-PHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~-~~~lv~e~~~   74 (183)
                      |.-.++.||++.     ...+++.||+|++.........+.+.+|+.+++.+ +||||+++++++..++ ..++++||++
T Consensus        36 g~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~  115 (316)
T 2xir_A           36 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK  115 (316)
T ss_dssp             EECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCT
T ss_pred             cCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCC
Confidence            344567788776     56788999999998776766677899999999999 7999999999988754 5899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSG-SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      +++|.+++............ ........+++..++.++.|++.|+.+||+++++|+||||+||+++.++.++|+|||++
T Consensus       116 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  195 (316)
T 2xir_A          116 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA  195 (316)
T ss_dssp             TEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGG
T ss_pred             CCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccc
Confidence            99999999765431100000 00111123788999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcc-------cccceeeeeecccCCCccc
Q psy2674         154 KDTYQK-------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       154 ~~~~~~-------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ......       ...++..|+|||++.+..+
T Consensus       196 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~  227 (316)
T 2xir_A          196 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVY  227 (316)
T ss_dssp             SCTTTCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             cccccCccceeccCCCcceeecCchhhccccc
Confidence            865432       2344678999999876655

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=2.2e-30  Score=194.50  Aligned_cols=163  Identities=21%  Similarity=0.262  Sum_probs=128.5

Q ss_pred             CCCCCceeeeccCCCCcce----EEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSV----LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.+|.||++.+..++..    ||+|.+.........+.+.+|+.+++.++||||+++++++.++ ..++++|++.+++
T Consensus        24 G~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~~~g~  102 (327)
T 3poz_A           24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGC  102 (327)
T ss_dssp             EEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECCTTCB
T ss_pred             eeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEecCCCc
Confidence            4456788999987777665    5788776544445556899999999999999999999999875 4788999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++....
T Consensus       103 L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~  168 (327)
T 3poz_A          103 LLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             HHHHHHHSTT--------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHT
T ss_pred             HHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEcc
Confidence            9999977533              58899999999999999999999999999999999999999999999999987432


Q ss_pred             cc-------cccceeeeeecccCCCcccc
Q psy2674         158 QK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..       ...++..|+|||++.+..|+
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  197 (327)
T 3poz_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYT  197 (327)
T ss_dssp             TTCC-------CCCGGGSCHHHHHHCCCC
T ss_pred             CCcccccccCCCccccccChHHhccCCCC
Confidence            21       22346689999998776653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=6.7e-30  Score=191.33  Aligned_cols=169  Identities=25%  Similarity=0.376  Sum_probs=125.4

Q ss_pred             CCCCCceeeeccCCCCcc---eEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCcc------EEEEe
Q psy2674           2 SLIPNARGLKASDPQDTS---VLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH------YLLLE   71 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~---~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~------~lv~e   71 (183)
                      |.-.++.||++.+..++.   .||+|++.... .....+.+.+|+++++.++||||+++++++......      ++++|
T Consensus        32 g~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e  111 (323)
T 3qup_A           32 GKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILP  111 (323)
T ss_dssp             EEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEE
T ss_pred             cccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEE
Confidence            345678899998887775   89999987432 344566899999999999999999999999876655      89999


Q ss_pred             eCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEeccc
Q psy2674          72 YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG  151 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg  151 (183)
                      |+++++|.+++.......         ....+++..++.++.|++.|+.|||++|++|+||||+||+++.++.++|+|||
T Consensus       112 ~~~~~~L~~~l~~~~~~~---------~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg  182 (323)
T 3qup_A          112 FMKHGDLHAFLLASRIGE---------NPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFG  182 (323)
T ss_dssp             CCTTCBHHHHHHHHHC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred             eccCCcHHHHHHhhhccc---------cccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecc
Confidence            999999999997653210         11248899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccc-------ccceeeeeecccCCCcccc
Q psy2674         152 LSKDTYQKE-------YYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       152 ~a~~~~~~~-------~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++.......       ..+++.|+|||++.+..++
T Consensus       183 ~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  217 (323)
T 3qup_A          183 LSRKIYSGDYYRQGCASKLPVKWLALESLADNLYT  217 (323)
T ss_dssp             C-----------------CCGGGCCHHHHHHCCCC
T ss_pred             ccccccccccccccccccCcccccCchhhcCCCCC
Confidence            998654332       2335679999998776553

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.96  E-value=9.2e-30  Score=194.24  Aligned_cols=156  Identities=19%  Similarity=0.316  Sum_probs=132.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCcc------EEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH------YLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~------~lv~e~~~   74 (183)
                      |.-.+|.||++.+..+++.||+|++... ........+.+|+.+++.++||||+++++++...+..      ++++||++
T Consensus        51 G~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~  130 (371)
T 4exu_A           51 GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ  130 (371)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc
Confidence            4567889999999999999999999743 3455567889999999999999999999999877655      99999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       ++|.+.+..                 .+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||++.
T Consensus       131 -~~l~~~~~~-----------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~  192 (371)
T 4exu_A          131 -TDLQKIMGM-----------------EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR  192 (371)
T ss_dssp             -EEHHHHTTS-----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred             -ccHHHHhhc-----------------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccc
Confidence             788776631                 48899999999999999999999999999999999999999999999999998


Q ss_pred             CCCcc--cccceeeeeecccCCC
Q psy2674         155 DTYQK--EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~--~~~~~~~~~~pe~~~~  175 (183)
                      .....  ...++++|+|||++.+
T Consensus       193 ~~~~~~~~~~~t~~y~aPE~~~~  215 (371)
T 4exu_A          193 HADAEMTGYVVTRWYRAPEVILS  215 (371)
T ss_dssp             -------CTTCCCTTSCHHHHSC
T ss_pred             ccccCcCCcccCccccCHHHhcC
Confidence            65443  4677999999999876

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.96  E-value=1.5e-29  Score=197.57  Aligned_cols=160  Identities=19%  Similarity=0.284  Sum_probs=133.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-ccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-PHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++...  +..||+|.+.....   .+.+.+|+.+++.++||||+++++++.++. ..+++|||+++++|.+
T Consensus       202 G~G~fg~V~~~~~~--~~~vavK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~  276 (450)
T 1k9a_A          202 GKGEFGDVMLGDYR--GNKVAVKCIKNDAT---AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD  276 (450)
T ss_dssp             EECSSEEEEEEEET--TEEEEEEEESSCTT---SHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHH
T ss_pred             cCcCCeeEEEEEec--CCeEEEEEeCCchH---HHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHH
Confidence            34567888888654  77999999975542   347899999999999999999999987655 7899999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++...+.             ..+++..++.++.|++.|+.|||+++++||||||+||+++.++.+||+|||+++..... 
T Consensus       277 ~l~~~~~-------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~  343 (450)
T 1k9a_A          277 YLRSRGR-------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  343 (450)
T ss_dssp             HHHHHCT-------------TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred             HHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc
Confidence            9987643             23688999999999999999999999999999999999999999999999999854432 


Q ss_pred             -cccceeeeeecccCCCcccc
Q psy2674         160 -EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 -~~~~~~~~~~pe~~~~~~~~  179 (183)
                       ...++..|+|||++.+..|+
T Consensus       344 ~~~~~~~~y~aPE~~~~~~~~  364 (450)
T 1k9a_A          344 DTGKLPVKWTAPEALREKKFS  364 (450)
T ss_dssp             ---CCCTTTSCHHHHHSSCCC
T ss_pred             cCCCCCcceeCHHHhcCCCCC
Confidence             23446779999998876653

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=1.5e-29  Score=187.33  Aligned_cols=159  Identities=20%  Similarity=0.294  Sum_probs=133.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec-------------CCccEE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD-------------GDPHYL   68 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------------~~~~~l   68 (183)
                      |.-.++.||++.+..+++.||+|.+..  .....+.+.+|+.+++.++||||+++++++.+             .+..++
T Consensus        15 g~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l   92 (303)
T 1zy4_A           15 GQGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFI   92 (303)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEE--EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEE
T ss_pred             ccCCcEEEEEEEEcCCCeEEEEEEEec--cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEE
Confidence            445678899999999999999999863  34455688999999999999999999998865             346789


Q ss_pred             EEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEe
Q psy2674          69 LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS  148 (183)
Q Consensus        69 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~  148 (183)
                      ++||+++++|.+++.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+
T Consensus        93 v~e~~~~~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~  158 (303)
T 1zy4_A           93 QMEYCENGTLYDLIHSENL--------------NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIG  158 (303)
T ss_dssp             EEECCCSCBHHHHHHHSCG--------------GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC
T ss_pred             EEecCCCCCHHHhhhcccc--------------ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEe
Confidence            9999999999999976532              47788999999999999999999999999999999999999999999


Q ss_pred             cccCCCCCCc-------------------ccccceeeeeecccCCCc
Q psy2674         149 LSGLSKDTYQ-------------------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       149 dfg~a~~~~~-------------------~~~~~~~~~~~pe~~~~~  176 (183)
                      |||++.....                   ....+++.|+|||++.+.
T Consensus       159 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  205 (303)
T 1zy4_A          159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGT  205 (303)
T ss_dssp             CCCCCSCTTC-------------------------CTTSCHHHHTSC
T ss_pred             eCcchhhcccccchhccccccccccccccccCCCcccccCcccccCC
Confidence            9999975432                   134568889999998764

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=1.2e-29  Score=187.74  Aligned_cols=160  Identities=16%  Similarity=0.140  Sum_probs=137.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++......   +.+.+|+..++.+ +|++++++++++.++...++++||+ +++|.+
T Consensus        19 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~   94 (298)
T 1csn_A           19 GEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLED   94 (298)
T ss_dssp             EECSSCEEEEEEETTTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             eecCCEEEEEEEECCCCcEEEEEEeccCCcc---HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHH
Confidence            4456789999999999999999998744332   2578899999999 8999999999999999999999999 799999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc-----eEEecccCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS-----VKISLSGLSKD  155 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~-----~ki~dfg~a~~  155 (183)
                      ++.....              .+++..++.++.|++.|+.|||+++++||||||+||+++.++.     ++|+|||++..
T Consensus        95 ~l~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           95 LLDLCGR--------------KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             HHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             HHHHhcc--------------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence            9986542              5899999999999999999999999999999999999976665     99999999975


Q ss_pred             CCc------------ccccceeeeeecccCCCcccc
Q psy2674         156 TYQ------------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       156 ~~~------------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...            ....+++.|+|||++.+..++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  196 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQS  196 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCC
Confidence            432            234578899999999887653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.96  E-value=2.8e-29  Score=187.40  Aligned_cols=164  Identities=15%  Similarity=0.171  Sum_probs=136.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec----CCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD----GDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++.+..+++.||+|.+... .....+.+.+|+++++.++||||+++++++..    ....++++||+++++
T Consensus        38 g~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~  116 (317)
T 2buj_A           38 GEGGFSYVDLVEGLHDGHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGT  116 (317)
T ss_dssp             EC--CEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCB
T ss_pred             cCCCCeEEEEEEecCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCc
Confidence            4456788999999999999999998643 34556688999999999999999999999873    346889999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....           ....+++..++.++.|++.||.+||+++++|+||+|+||+++.++.++|+|||++....
T Consensus       117 L~~~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          117 LWNEIERLKD-----------KGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             HHHHHHHHHT-----------TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred             HHHHHHHHHh-----------cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence            9999987422           11258999999999999999999999999999999999999999999999999987554


Q ss_pred             cc--------------cccceeeeeecccCCCcc
Q psy2674         158 QK--------------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       158 ~~--------------~~~~~~~~~~pe~~~~~~  177 (183)
                      ..              ...+++.|+|||++.+..
T Consensus       186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  219 (317)
T 2buj_A          186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQS  219 (317)
T ss_dssp             EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCS
T ss_pred             cccccccccccccccccccCCcccCCHhHhccCC
Confidence            21              123488899999987654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.96  E-value=1.6e-29  Score=191.28  Aligned_cols=157  Identities=18%  Similarity=0.278  Sum_probs=136.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC-----CccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG-----DPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.+..+++.||+|.+...........+.+|+.+++.++||||+++++++..+     ...++++|+++ +
T Consensus        20 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~   98 (353)
T 2b9h_A           20 GEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-T   98 (353)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-E
T ss_pred             cCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-c
Confidence            44567899999999999999999998666666677889999999999999999999998654     67899999998 7


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+.+...                .+++..++.++.|++.||.|||++|++|+||||+||+++.++.++|+|||++...
T Consensus        99 ~L~~~~~~~----------------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A           99 DLHRVISTQ----------------MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII  162 (353)
T ss_dssp             EHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             cHHHHHhhc----------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence            999988653                4889999999999999999999999999999999999999999999999999754


Q ss_pred             Ccc---------------cccceeeeeecccCCC
Q psy2674         157 YQK---------------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       157 ~~~---------------~~~~~~~~~~pe~~~~  175 (183)
                      ...               ...++++|+|||++.+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  196 (353)
T 2b9h_A          163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT  196 (353)
T ss_dssp             C----------------CCCCCCGGGCCHHHHHS
T ss_pred             ccccccccCccccccchhhccccccccCCeeecc
Confidence            321               2456889999998654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.96  E-value=1.1e-29  Score=186.73  Aligned_cols=159  Identities=21%  Similarity=0.277  Sum_probs=136.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec----------------CCc
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD----------------GDP   65 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----------------~~~   65 (183)
                      |.-.++.||++.+..+++.||+|.+....     +.+.+|+++++.++||||+++++++..                ...
T Consensus        20 g~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~   94 (284)
T 2a19_B           20 GSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKC   94 (284)
T ss_dssp             ECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEE
T ss_pred             ccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcce
Confidence            45567889999999999999999987443     256789999999999999999998854                344


Q ss_pred             cEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCce
Q psy2674          66 HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSV  145 (183)
Q Consensus        66 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~  145 (183)
                      .+++|||+++++|.+++.....             ..+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.+
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~  161 (284)
T 2a19_B           95 LFIQMEFCDKGTLEQWIEKRRG-------------EKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQV  161 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHGGG-------------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEE
T ss_pred             EEEEEeccCCCCHHHHHhhccC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCE
Confidence            7899999999999999976532             258899999999999999999999999999999999999999999


Q ss_pred             EEecccCCCCCCcc----cccceeeeeecccCCCccc
Q psy2674         146 KISLSGLSKDTYQK----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       146 ki~dfg~a~~~~~~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      +|+|||++......    ...+++.|+|||++.+..+
T Consensus       162 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  198 (284)
T 2a19_B          162 KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDY  198 (284)
T ss_dssp             EECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCC
T ss_pred             EECcchhheeccccccccccCCcccccChhhhccCCC
Confidence            99999998755432    3557889999999877655

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.96  E-value=1.1e-30  Score=199.62  Aligned_cols=165  Identities=14%  Similarity=0.121  Sum_probs=129.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC--CCHHHHHHHHHHHH---HHhcCCCcceeeEE-------eEEecCCc----
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS--KDDEALHEFKREID---LFCKLDHAHVVKMI-------GICRDGDP----   65 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~---~l~~l~h~~i~~~~-------~~~~~~~~----   65 (183)
                      |.-.++.||++.+..+++.||+|++...  ......+.+.+|+.   .++.++||||++++       +++.+++.    
T Consensus        82 G~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~  161 (377)
T 3byv_A           82 GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMI  161 (377)
T ss_dssp             EEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEE
T ss_pred             ecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCcccc
Confidence            3446789999999999999999998732  23344568899994   55555899999988       66665543    


Q ss_pred             -------------cEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy2674          66 -------------HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI  132 (183)
Q Consensus        66 -------------~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di  132 (183)
                                   .+++|||++ |+|.+++........        ....+++..++.++.|++.||.|||+++++||||
T Consensus       162 ~~~~~~~~~~i~~~~lv~E~~~-g~L~~~l~~~~~~~~--------~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDi  232 (377)
T 3byv_A          162 RVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSS--------THKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  232 (377)
T ss_dssp             EC------CEEESEEEEEECCS-EEHHHHHHHHHHTTT--------TTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccccCCCceEEEEEEEEEeccC-CCHHHHHHhcccccc--------ccccccHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence                         789999995 899999987643100        0012334788889999999999999999999999


Q ss_pred             ccceeEeccCCceEEecccCCCCCCc--ccccceeeeeecccCCCc
Q psy2674         133 AARNCLISSDLSVKISLSGLSKDTYQ--KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       133 ~~~nil~~~~~~~ki~dfg~a~~~~~--~~~~~~~~~~~pe~~~~~  176 (183)
                      ||+|||++.++.+||+|||+|+....  ....+ +.|+|||++.+.
T Consensus       233 kp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~  277 (377)
T 3byv_A          233 RPVDIVLDQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARR  277 (377)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHH
T ss_pred             CHHHEEEcCCCCEEEEechhheecCCcccCCCC-cCccChhhhccc
Confidence            99999999999999999999986543  24556 899999998776

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.96  E-value=2.5e-30  Score=194.25  Aligned_cols=165  Identities=18%  Similarity=0.189  Sum_probs=137.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++... ........+.+|+.+++.+ .||||+++++++.+++..++++||+++++|.
T Consensus        38 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  117 (327)
T 3lm5_A           38 GRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIF  117 (327)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGG
T ss_pred             CCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHH
Confidence            4456788999999999999999998743 2233345788999999999 6799999999999999999999999999998


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---CCceEEecccCCCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSKDT  156 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---~~~~ki~dfg~a~~~  156 (183)
                      +++.....             ..+++..++.++.|++.||.+||++|++||||||+||+++.   .+.++|+|||++...
T Consensus       118 ~~~~~~~~-------------~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~  184 (327)
T 3lm5_A          118 SLCLPELA-------------EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI  184 (327)
T ss_dssp             GGGSSCC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred             HHHHHhcc-------------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence            88744311             25899999999999999999999999999999999999987   789999999999865


Q ss_pred             Ccc----cccceeeeeecccCCCcccc
Q psy2674         157 YQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       157 ~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...    ...+++.|+|||++.+.+++
T Consensus       185 ~~~~~~~~~~gt~~y~aPE~~~~~~~~  211 (327)
T 3lm5_A          185 GHACELREIMGTPEYLAPEILNYDPIT  211 (327)
T ss_dssp             ---------CCCGGGCCHHHHTTCCCC
T ss_pred             CCccccccccCCcCccCCeeecCCCCC
Confidence            443    35678999999999887654

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.96  E-value=2.1e-29  Score=190.39  Aligned_cols=156  Identities=14%  Similarity=0.205  Sum_probs=132.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCC--cceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDH--AHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+ .+++.||+|++.. ..+....+.+.+|+.+++.++|  +||+++++++.+++..+++||+ .+++|
T Consensus        18 G~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~~~~L   95 (343)
T 3dbq_A           18 GSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDL   95 (343)
T ss_dssp             SCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-CSEEH
T ss_pred             ecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-CCCCH
Confidence            5667889999988 4688999999874 3455666788999999999976  9999999999999999999995 56899


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.||.|||+++++||||||+|||++ ++.+||+|||++.....
T Consensus        96 ~~~l~~~~---------------~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~  159 (343)
T 3dbq_A           96 NSWLKKKK---------------SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  159 (343)
T ss_dssp             HHHHHHSC---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence            99998753               488999999999999999999999999999999999996 67899999999986543


Q ss_pred             c-------cccceeeeeecccCCC
Q psy2674         159 K-------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~-------~~~~~~~~~~pe~~~~  175 (183)
                      .       ...+|++|+|||++.+
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~  183 (343)
T 3dbq_A          160 DTTSVVKDSQVGTVNYMPPEAIKD  183 (343)
T ss_dssp             ----------CCCCSSCCHHHHHH
T ss_pred             ccccccCCCCcCCcCcCCHHHHhh
Confidence            2       3467999999999854

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.96  E-value=3.6e-30  Score=190.87  Aligned_cols=167  Identities=20%  Similarity=0.203  Sum_probs=121.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..+++.||+|.+.........+.+.+|+..++.++||||+++++++..++..++++||+++++|.++
T Consensus        24 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  103 (303)
T 2vwi_A           24 GSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDI  103 (303)
T ss_dssp             C---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHH
T ss_pred             ccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHH
Confidence            55567889999999999999999987554445556788999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.......       ......+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++.....   
T Consensus       104 l~~~~~~~-------~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~  176 (303)
T 2vwi_A          104 IKHIVAKG-------EHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGD  176 (303)
T ss_dssp             HHHHHHTT-------TTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC----
T ss_pred             HHHHhhcc-------ccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCC
Confidence            97632110       00112588999999999999999999999999999999999999999999999998864332   


Q ss_pred             -------ccccceeeeeecccCCC
Q psy2674         159 -------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 -------~~~~~~~~~~~pe~~~~  175 (183)
                             ....+++.|+|||++.+
T Consensus       177 ~~~~~~~~~~~~~~~y~aPE~~~~  200 (303)
T 2vwi_A          177 ITRNKVRKTFVGTPCWMAPEVMEQ  200 (303)
T ss_dssp             -----------CCCTTCCHHHHHH
T ss_pred             ccchhhhcccCCCccccCHHHhcc
Confidence                   23457888999998754

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.96  E-value=2.8e-29  Score=188.35  Aligned_cols=162  Identities=26%  Similarity=0.401  Sum_probs=136.1

Q ss_pred             CCCCCceeeecc----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC--ccEEEEeeCCC
Q psy2674           2 SLIPNARGLKAS----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD--PHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~~~lv~e~~~~   75 (183)
                      |.-.++.||++.    +..+++.||+|++..... ...+.+.+|+++++.++||||+++++++...+  ..++++||+++
T Consensus        50 g~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~  128 (326)
T 2w1i_A           50 GKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE-EHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPY  128 (326)
T ss_dssp             ECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCS-HHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTT
T ss_pred             ccCCCeEEEEEEeccccCCCceEEEEEEeccCCH-HHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCC
Confidence            445678888887    677899999999975433 44568999999999999999999999987644  78999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+++.....              .+++..++.++.|++.||.+||+++++|+||||+||+++.++.++|+|||++..
T Consensus       129 ~~L~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~  194 (326)
T 2w1i_A          129 GSLRDYLQKHKE--------------RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV  194 (326)
T ss_dssp             CBHHHHHHHSTT--------------SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred             CCHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence            999999976532              488999999999999999999999999999999999999999999999999986


Q ss_pred             CCcc--------cccceeeeeecccCCCccc
Q psy2674         156 TYQK--------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       156 ~~~~--------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ....        ...++..|+|||++.+..+
T Consensus       195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  225 (326)
T 2w1i_A          195 LPQDKEYYKVKEPGESPIFWYAPESLTESKF  225 (326)
T ss_dssp             CCSSCSEEECSSCCSCCGGGCCHHHHHHCEE
T ss_pred             ccccccccccccCCCCceeEECchhhcCCCC
Confidence            5432        2234567999999876554

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.1e-29  Score=204.78  Aligned_cols=162  Identities=23%  Similarity=0.330  Sum_probs=134.1

Q ss_pred             CCCCCceeeeccC--CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASD--PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|.||++..  ..++..||+|++.........+.+.+|+++++.++||||+++++++.+ +..+++|||+++++|.
T Consensus       345 G~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~  423 (613)
T 2ozo_A          345 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLH  423 (613)
T ss_dssp             EECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHH
T ss_pred             ecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHH
Confidence            4456788888754  356788999999865544456689999999999999999999999976 5689999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+++.....
T Consensus       424 ~~l~~~~~--------------~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          424 KFLVGKRE--------------EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             HHHTTCTT--------------TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--
T ss_pred             HHHhhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCC
Confidence            99865432              5899999999999999999999999999999999999999999999999999865432


Q ss_pred             c--------ccceeeeeecccCCCccc
Q psy2674         160 E--------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ~--------~~~~~~~~~pe~~~~~~~  178 (183)
                      .        ..++..|+|||++.+..|
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~~~~  516 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINFRKF  516 (613)
T ss_dssp             ------------CCTTSCHHHHHHCCC
T ss_pred             CceeeeccCCCCccceeCHhhhcCCCC
Confidence            1        122457999999876655

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.96  E-value=5.7e-30  Score=187.93  Aligned_cols=167  Identities=19%  Similarity=0.294  Sum_probs=139.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..+++.||+|.+... ......+.+.+|+.+++.++||||+++++++.+  .+..++++||+++++|
T Consensus        15 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L   94 (279)
T 2w5a_A           15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL   94 (279)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEH
T ss_pred             cCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCH
Confidence            4456788999999999999999999743 355667789999999999999999999998854  5678999999998999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----ceecccccceeEeccCCceEEecccCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-----LIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-----ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      .+++.....           ....+++..++.++.|++.|+.+||+++     ++|+||+|+||+++.++.++|+|||++
T Consensus        95 ~~~l~~~~~-----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~  163 (279)
T 2w5a_A           95 ASVITKGTK-----------ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  163 (279)
T ss_dssp             HHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred             HHHHHhhcc-----------cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence            999987543           1124889999999999999999999999     999999999999999999999999998


Q ss_pred             CCCCcc-----cccceeeeeecccCCCcccc
Q psy2674         154 KDTYQK-----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~~-----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ......     ...++..|+|||++.+.+++
T Consensus       164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  194 (279)
T 2w5a_A          164 RILNHDTSFAKTFVGTPYYMSPEQMNRMSYN  194 (279)
T ss_dssp             HHC---CHHHHHHHSCCTTCCHHHHHCC-CC
T ss_pred             eeeccccccccccCCCccccChHHhccCCCC
Confidence            765432     34568899999998876553

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.96  E-value=2.2e-29  Score=186.42  Aligned_cols=158  Identities=15%  Similarity=0.214  Sum_probs=137.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC----C----HHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK----D----DEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~----~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~   72 (183)
                      |.-.++.||++.+..+++.||+|++....    .    ....+.+.+|+++++.+ +||||+++++++.+++..++++||
T Consensus        26 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~  105 (298)
T 1phk_A           26 GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL  105 (298)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEec
Confidence            34567889999999999999999987432    1    23356788999999999 499999999999999999999999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      +++++|.+++....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||+
T Consensus       106 ~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  170 (298)
T 1phk_A          106 MKKGELFDYLTEKV---------------TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF  170 (298)
T ss_dssp             CTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             cCCCcHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccc
Confidence            99999999997653               489999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc----cccceeeeeecccCC
Q psy2674         153 SKDTYQK----EYYKYRWVICSNIAE  174 (183)
Q Consensus       153 a~~~~~~----~~~~~~~~~~pe~~~  174 (183)
                      +......    ...++..|+|||++.
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~  196 (298)
T 1phk_A          171 SCQLDPGEKLREVCGTPSYLAPEIIE  196 (298)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHH
T ss_pred             hhhcCCCcccccccCCccccCHHHhc
Confidence            9755432    356788999999975

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=1.2e-30  Score=195.76  Aligned_cols=163  Identities=18%  Similarity=0.245  Sum_probs=133.0

Q ss_pred             CCCCCceeeeccCCCCcce----EEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSV----LMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++.+..++..    |++|.+...........+.+|+..++.++||||+++++++. ++..++++||+++++
T Consensus        22 G~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~  100 (325)
T 3kex_A           22 GSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGS  100 (325)
T ss_dssp             ECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCB
T ss_pred             eecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCC
Confidence            5567889999988777765    77787754433333346778999999999999999999986 467889999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++....
T Consensus       101 L~~~l~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~  166 (325)
T 3kex_A          101 LLDHVRQHRG--------------ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLP  166 (325)
T ss_dssp             SHHHHHSSGG--------------GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSC
T ss_pred             HHHHHHHccc--------------cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccC
Confidence            9999976432              48889999999999999999999999999999999999999999999999998553


Q ss_pred             cc-------cccceeeeeecccCCCcccc
Q psy2674         158 QK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..       ...++..|+|||++.+..|+
T Consensus       167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  195 (325)
T 3kex_A          167 PDDKQLLYSEAKTPIKWMALESIHFGKYT  195 (325)
T ss_dssp             CCTTCCC-----CCTTTSCHHHHHHCCCC
T ss_pred             cccccccccCCCCcccccChHHhccCCCC
Confidence            32       23446689999998766553

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.96  E-value=3.4e-29  Score=192.33  Aligned_cols=156  Identities=14%  Similarity=0.199  Sum_probs=133.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCC--CcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLD--HAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+.. ++.||+|++... .+....+.+.+|+.+++.++  |+||+++++++..++..+++|| +.+++|
T Consensus        65 G~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L  142 (390)
T 2zmd_A           65 GSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL  142 (390)
T ss_dssp             ECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEH
T ss_pred             ccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCH
Confidence            456788999998865 899999998743 45666778999999999995  5999999999999999999999 566999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.||.|||+++|+||||||+|||++ ++.+||+|||++.....
T Consensus       143 ~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~  206 (390)
T 2zmd_A          143 NSWLKKKK---------------SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  206 (390)
T ss_dssp             HHHHHHCS---------------SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence            99997653               488889999999999999999999999999999999995 58899999999986543


Q ss_pred             -------ccccceeeeeecccCCC
Q psy2674         159 -------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 -------~~~~~~~~~~~pe~~~~  175 (183)
                             ....+|++|+|||++.+
T Consensus       207 ~~~~~~~~~~~gt~~y~aPE~~~~  230 (390)
T 2zmd_A          207 DTTSVVKDSQVGAVNYMPPEAIKD  230 (390)
T ss_dssp             -------CCSCCCGGGCCHHHHHC
T ss_pred             CCccccCCCCCcCCCccChHHhhh
Confidence                   24568999999999865

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.96  E-value=5e-30  Score=192.43  Aligned_cols=177  Identities=25%  Similarity=0.359  Sum_probs=135.5

Q ss_pred             CCCCCceeeeccCCCCcceE--EEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVL--MAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~v--avK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+..++..+  ++|.+.........+.+.+|+++++.+ +||||+++++++.+++..+++|||+++++|
T Consensus        34 g~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L  113 (327)
T 1fvr_A           34 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL  113 (327)
T ss_dssp             ECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred             ecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCH
Confidence            34567889999988888765  999887655555566889999999999 999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKS-GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      .+++........... .........+++..++.++.|++.||.+||+++++|+||||+||+++.++.++|+|||++....
T Consensus       114 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~  193 (327)
T 1fvr_A          114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE  193 (327)
T ss_dssp             HHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSC
T ss_pred             HHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCcccc
Confidence            999976531000000 0000011258899999999999999999999999999999999999999999999999987443


Q ss_pred             cc----cccceeeeeecccCCCccc
Q psy2674         158 QK----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~----~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..    ...++..|+|||++.+..+
T Consensus       194 ~~~~~~~~~~~~~y~aPE~~~~~~~  218 (327)
T 1fvr_A          194 VYVKKTMGRLPVRWMAIESLNYSVY  218 (327)
T ss_dssp             EECCC----CCTTTCCHHHHHHCEE
T ss_pred             ccccccCCCCCccccChhhhccccC
Confidence            22    2334667999999876554

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.96  E-value=1.8e-29  Score=186.48  Aligned_cols=161  Identities=24%  Similarity=0.332  Sum_probs=134.0

Q ss_pred             CCCCCceeeec--cCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKA--SDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~--~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++  ....+++.||+|++.... +....+.+.+|+++++.++||||+++++++ ..+..++++||+++++|
T Consensus        26 g~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L  104 (291)
T 1xbb_A           26 GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPL  104 (291)
T ss_dssp             EECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEH
T ss_pred             ccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCH
Confidence            44567889988  567789999999997443 344466889999999999999999999999 55678999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++.....
T Consensus       105 ~~~l~~~~---------------~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (291)
T 1xbb_A          105 NKYLQQNR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  169 (291)
T ss_dssp             HHHHHHCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             HHHHHhCc---------------CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence            99997653               488999999999999999999999999999999999999999999999999975543


Q ss_pred             cc--------ccceeeeeecccCCCccc
Q psy2674         159 KE--------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~--------~~~~~~~~~pe~~~~~~~  178 (183)
                      ..        ..++..|+|||++.+..+
T Consensus       170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~  197 (291)
T 1xbb_A          170 DENYYKAQTHGKWPVKWYAPECINYYKF  197 (291)
T ss_dssp             TCSEEEC----CCCGGGCCHHHHHHCEE
T ss_pred             CCCcccccccCCCCceeeChHHhccCCC
Confidence            21        123467999999876554

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=1.6e-29  Score=184.39  Aligned_cols=159  Identities=20%  Similarity=0.301  Sum_probs=134.9

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHH
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL   82 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   82 (183)
                      .-.++.||++... ++..||+|.+......  .+.+.+|+++++.++||||+++++++.+++..++++||+++++|.+++
T Consensus        18 ~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   94 (267)
T 3t9t_A           18 SGQFGLVHLGYWL-NKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL   94 (267)
T ss_dssp             EETTEEEEEEEET-TTEEEEEEEECTTTBC--HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHH
T ss_pred             CCCceeEEEEEec-CCCeEEEEEccccCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHH
Confidence            3456788888775 5778999999854432  246889999999999999999999999999999999999999999999


Q ss_pred             HhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc---
Q psy2674          83 LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK---  159 (183)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~---  159 (183)
                      .....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++......   
T Consensus        95 ~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  160 (267)
T 3t9t_A           95 RTQRG--------------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT  160 (267)
T ss_dssp             HHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH
T ss_pred             hhCcc--------------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccc
Confidence            76532              5889999999999999999999999999999999999999999999999999855432   


Q ss_pred             ---cccceeeeeecccCCCccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~  178 (183)
                         ...++..|+|||++.+..+
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~  182 (267)
T 3t9t_A          161 SSTGTKFPVKWASPEVFSFSRY  182 (267)
T ss_dssp             STTSTTCCGGGCCHHHHHHCCC
T ss_pred             ccccccccccccChhhhcCCCc
Confidence               2334667999999876554

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=2.2e-29  Score=194.19  Aligned_cols=167  Identities=20%  Similarity=0.274  Sum_probs=126.1

Q ss_pred             CCCCCCceeeecc--CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCCC
Q psy2674           1 MSLIPNARGLKAS--DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDWG   76 (183)
Q Consensus         1 ~~~~~~~~~~~~~--~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~   76 (183)
                      +|.-.+|.||++.  +..+++.||+|++.......   .+.+|+.+++.++||||+++++++..  +...+++|||++ +
T Consensus        29 lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~---~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~-~  104 (405)
T 3rgf_A           29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM---SACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-H  104 (405)
T ss_dssp             CC-----EEEEEEESSSSCCCCEEEEECSSSSCCH---HHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCS-E
T ss_pred             eeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCH---HHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCC-C
Confidence            3566788999998  44789999999997544332   57889999999999999999999954  667899999998 7


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe----ccCCceEEecccC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI----SSDLSVKISLSGL  152 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~----~~~~~~ki~dfg~  152 (183)
                      +|.+.+........      ......+++..++.++.|++.||.|||+++++||||||+|||+    +..+.+||+|||+
T Consensus       105 ~l~~~~~~~~~~~~------~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  178 (405)
T 3rgf_A          105 DLWHIIKFHRASKA------NKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF  178 (405)
T ss_dssp             EHHHHHHHHHHHC-------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred             CHHHHHHHhccccc------cccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence            88888865432100      0011248899999999999999999999999999999999999    6779999999999


Q ss_pred             CCCCCc--------ccccceeeeeecccCCCcc
Q psy2674         153 SKDTYQ--------KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       153 a~~~~~--------~~~~~~~~~~~pe~~~~~~  177 (183)
                      |.....        ....+|++|+|||++.+..
T Consensus       179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  211 (405)
T 3rgf_A          179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGAR  211 (405)
T ss_dssp             CC----------------CCCTTCCHHHHTTCC
T ss_pred             ceecCCCCcccccCCCceecCcccCchhhcCCC
Confidence            985432        2456799999999988743

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=7.5e-30  Score=191.71  Aligned_cols=163  Identities=21%  Similarity=0.262  Sum_probs=130.9

Q ss_pred             CCCCCceeeeccCCCCcceE----EEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVL----MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~v----avK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-.++.||++.+..++..+    ++|.+.........+.+.+|+.+++.++||||+++++++.++ ..++++|++.+++
T Consensus        24 G~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~~~~g~  102 (327)
T 3lzb_A           24 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGC  102 (327)
T ss_dssp             EECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECCCSSCB
T ss_pred             eeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEecCCCc
Confidence            44578899999887777654    677765444444456789999999999999999999999875 4788999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.++|+|||++....
T Consensus       103 L~~~l~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~  168 (327)
T 3lzb_A          103 LLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  168 (327)
T ss_dssp             HHHHHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred             HHHHHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence            9999977543              58899999999999999999999999999999999999999999999999998553


Q ss_pred             cc-------cccceeeeeecccCCCcccc
Q psy2674         158 QK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..       ...++..|+|||++.+..|+
T Consensus       169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  197 (327)
T 3lzb_A          169 AEEKEYHAEGGKVPIKWMALESILHRIYT  197 (327)
T ss_dssp             -----------CCCGGGSCHHHHHHCCCC
T ss_pred             CccccccccCCCccccccCHHHHcCCCCC
Confidence            32       22345679999998776654

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.96  E-value=9.5e-29  Score=183.79  Aligned_cols=161  Identities=22%  Similarity=0.302  Sum_probs=136.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC---CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS---KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++..  ++..||+|.+...   ......+.+.+|+.+++.++||||+++++++.+++..++++||+++++|
T Consensus        40 g~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  117 (307)
T 2nru_A           40 GEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL  117 (307)
T ss_dssp             EECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBH
T ss_pred             ccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcH
Confidence            3456788998876  6889999998643   2334556889999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++......            ..+++..++.++.|++.||.+||+++++|+||+|+||+++.++.++|+|||++.....
T Consensus       118 ~~~l~~~~~~------------~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~  185 (307)
T 2nru_A          118 LDRLSCLDGT------------PPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK  185 (307)
T ss_dssp             HHHHHTGGGC------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred             HHHHHhccCC------------CCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeeccccccccc
Confidence            9999754321            2588999999999999999999999999999999999999999999999999875432


Q ss_pred             -------ccccceeeeeecccCCCc
Q psy2674         159 -------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 -------~~~~~~~~~~~pe~~~~~  176 (183)
                             ....+++.|+|||++.+.
T Consensus       186 ~~~~~~~~~~~g~~~y~aPE~~~~~  210 (307)
T 2nru_A          186 FAQTVMTSRIVGTTAYMAPEALRGE  210 (307)
T ss_dssp             CSSCEECSSCCSCGGGCCHHHHTTE
T ss_pred             ccccccccccCCCcCcCChHHhcCC
Confidence                   234678899999998764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.96  E-value=8.6e-30  Score=206.12  Aligned_cols=162  Identities=23%  Similarity=0.328  Sum_probs=134.5

Q ss_pred             CCCCCceeeec--cCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKA--SDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~--~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++  ....+++.||+|++... .+....+.+.+|+++++.++||||+++++++.+ +..+++|||+++++|
T Consensus       378 G~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L  456 (635)
T 4fl3_A          378 GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPL  456 (635)
T ss_dssp             EECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEH
T ss_pred             ccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCH
Confidence            44567889988  55677899999999743 334445689999999999999999999999975 468899999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+++....
T Consensus       457 ~~~l~~~~---------------~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~  521 (635)
T 4fl3_A          457 NKYLQQNR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  521 (635)
T ss_dssp             HHHHHHCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC
T ss_pred             HHHHhhCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCcccccc
Confidence            99997653               488999999999999999999999999999999999999999999999999875533


Q ss_pred             cc--------ccceeeeeecccCCCcccc
Q psy2674         159 KE--------YYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ~~--------~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..        ..++..|+|||++.+..|+
T Consensus       522 ~~~~~~~~~~~~~t~~y~APE~~~~~~~~  550 (635)
T 4fl3_A          522 DENYYKAQTHGKWPVKWYAPECINYYKFS  550 (635)
T ss_dssp             -------------CGGGSCHHHHHHCCCC
T ss_pred             CccccccccCCCCceeeeChhhhcCCCCC
Confidence            21        2235679999998776553

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.96  E-value=1e-29  Score=193.94  Aligned_cols=162  Identities=9%  Similarity=-0.002  Sum_probs=120.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcC--CCcceeeEE-------eEEecCC------
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKL--DHAHVVKMI-------GICRDGD------   64 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l--~h~~i~~~~-------~~~~~~~------   64 (183)
                      |.-.++.||++.+..+++.||+|++....  .....+.+.+|+..++.+  +||||++++       +++..++      
T Consensus        71 G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~  150 (371)
T 3q60_A           71 RVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQ  150 (371)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSB
T ss_pred             cCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeee
Confidence            44567899999999999999999998544  344556777885544444  699988755       4554332      


Q ss_pred             -----------ccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCc
Q psy2674          65 -----------PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQA------VTMAYQVALGLEHISDKRL  127 (183)
Q Consensus        65 -----------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~l~~lh~~~i  127 (183)
                                 ..+++|||++ ++|.+++.....              .+.....      +.++.|++.||.|||++++
T Consensus       151 ~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~--------------~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i  215 (371)
T 3q60_A          151 LSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF--------------VYVFRGDEGILALHILTAQLIRLAANLQSKGL  215 (371)
T ss_dssp             CSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH--------------SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             ccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc--------------ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC
Confidence                       3799999999 999999987643              2444444      6777999999999999999


Q ss_pred             eecccccceeEeccCCceEEecccCCCCCCcc--cccceeeeeecccCCC--ccc
Q psy2674         128 IHKDIAARNCLISSDLSVKISLSGLSKDTYQK--EYYKYRWVICSNIAEG--RRL  178 (183)
Q Consensus       128 vH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--~~~~~~~~~~pe~~~~--~~~  178 (183)
                      +||||||+|||++.++.+||+|||+|......  ...+++.|+|||++.+  ..|
T Consensus       216 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  270 (371)
T 3q60_A          216 VHGHFTPDNLFIMPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATF  270 (371)
T ss_dssp             EETTCSGGGEEECTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEEC
T ss_pred             ccCcCCHHHEEECCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCc
Confidence            99999999999999999999999999866544  3556799999999987  444

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=2.9e-29  Score=190.95  Aligned_cols=164  Identities=16%  Similarity=0.050  Sum_probs=130.4

Q ss_pred             CCCCCCceeeeccCCCC-----cceEEEeeccCCCCHHHH----------HHHHHHHHHHhcCCCcceeeEEeEEecC--
Q psy2674           1 MSLIPNARGLKASDPQD-----TSVLMAKSLVHSKDDEAL----------HEFKREIDLFCKLDHAHVVKMIGICRDG--   63 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~-----~~~vavK~~~~~~~~~~~----------~~~~~E~~~l~~l~h~~i~~~~~~~~~~--   63 (183)
                      +|.-.+|.||++.+..+     ++.||+|++.........          ....+|+..++.++|+||+++++++.+.  
T Consensus        43 lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~  122 (364)
T 3op5_A           43 IGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKN  122 (364)
T ss_dssp             CCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEEEET
T ss_pred             EecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeeeccC
Confidence            35567788898876554     689999998754321110          1233455667778899999999998764  


Q ss_pred             --CccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-
Q psy2674          64 --DPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-  140 (183)
Q Consensus        64 --~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-  140 (183)
                        ...+++|||+ +++|.+++.....              .+++..++.++.|++.||.|||+++++||||||+|||++ 
T Consensus       123 ~~~~~~lv~e~~-g~~L~~~~~~~~~--------------~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          123 GKSYRFMIMDRF-GSDLQKIYEANAK--------------RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY  187 (364)
T ss_dssp             TEEEEEEEEECE-EEEHHHHHHHTTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES
T ss_pred             CcceEEEEEeCC-CCCHHHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec
Confidence              4489999999 8999999977532              589999999999999999999999999999999999998 


Q ss_pred             -cCCceEEecccCCCCCCcc------------cccceeeeeecccCCCcccc
Q psy2674         141 -SDLSVKISLSGLSKDTYQK------------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       141 -~~~~~ki~dfg~a~~~~~~------------~~~~~~~~~~pe~~~~~~~~  179 (183)
                       .++.+||+|||+++.....            ...+|..|+|||++.+..++
T Consensus       188 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  239 (364)
T 3op5_A          188 KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPS  239 (364)
T ss_dssp             SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCC
T ss_pred             CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCC
Confidence             8899999999999754332            23478999999999887663

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.96  E-value=4.1e-29  Score=194.03  Aligned_cols=162  Identities=17%  Similarity=0.185  Sum_probs=137.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC------CCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL------DHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |.-.+|.||++.+..+++.||+|++...  ......+.+|+.+++.+      +|+||+++++.+...+..++++|+++ 
T Consensus       106 G~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-  182 (429)
T 3kvw_A          106 GKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-  182 (429)
T ss_dssp             EESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-
T ss_pred             ccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-
Confidence            4457889999999999999999998743  33445677788877766      57799999999999999999999997 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc--eEEecccCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS--VKISLSGLS  153 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~--~ki~dfg~a  153 (183)
                      ++|.+++.....             ..+++..++.++.|++.||.|||+++++||||||+|||++.++.  +||+|||+|
T Consensus       183 ~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a  249 (429)
T 3kvw_A          183 MNLYELIKKNKF-------------QGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS  249 (429)
T ss_dssp             CBHHHHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred             CCHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence            799999877532             24889999999999999999999999999999999999998877  999999999


Q ss_pred             CCCCc--ccccceeeeeecccCCCcccc
Q psy2674         154 KDTYQ--KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~--~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .....  ....+|++|+|||++.+.+|+
T Consensus       250 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~  277 (429)
T 3kvw_A          250 CYEHQRVYTYIQSRFYRAPEVILGARYG  277 (429)
T ss_dssp             EETTCCCCSSCSCGGGCCHHHHHTBCCC
T ss_pred             eecCCcccccCCCCCccChHHHhCCCCC
Confidence            75443  356789999999999887663

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.96  E-value=1.8e-29  Score=187.19  Aligned_cols=157  Identities=19%  Similarity=0.368  Sum_probs=131.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..+|+|++..... ...+.+.+|+++++.++||||+++++++.+++..++++||+++++|.++
T Consensus        28 g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~  106 (302)
T 2j7t_A           28 GDGAFGKVYKAKNKETGALAAAKVIETKSE-EELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI  106 (302)
T ss_dssp             ECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHH
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEecCCCH-HHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHH
Confidence            455778899999999999999999874422 2345788999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC----
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY----  157 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~----  157 (183)
                      +.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++....    
T Consensus       107 ~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  172 (302)
T 2j7t_A          107 MLELDR--------------GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ  172 (302)
T ss_dssp             HHHHTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH
T ss_pred             HHhhcc--------------CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc
Confidence            876533              58999999999999999999999999999999999999999999999999875321    


Q ss_pred             -cccccceeeeeecccC
Q psy2674         158 -QKEYYKYRWVICSNIA  173 (183)
Q Consensus       158 -~~~~~~~~~~~~pe~~  173 (183)
                       .....++..|+|||++
T Consensus       173 ~~~~~~~~~~y~aPE~~  189 (302)
T 2j7t_A          173 KRDSFIGTPYWMAPEVV  189 (302)
T ss_dssp             C-----CCGGGCCHHHH
T ss_pred             ccccccCChhhcCCeee
Confidence             2345678899999997

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.96  E-value=2.5e-29  Score=190.52  Aligned_cols=156  Identities=19%  Similarity=0.319  Sum_probs=131.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc------cEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP------HYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e~~~   74 (183)
                      |.-.+|.||++.+..+|+.||+|.+... ........+.+|+.+++.++||||+++++++...+.      .+++|||++
T Consensus        33 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~  112 (353)
T 3coi_A           33 GSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ  112 (353)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc
Confidence            4557889999999999999999999743 345556688999999999999999999999987654      499999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                       ++|.+.+..                 .+++..++.++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.
T Consensus       113 -~~l~~~~~~-----------------~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  174 (353)
T 3coi_A          113 -TDLQKIMGL-----------------KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLAR  174 (353)
T ss_dssp             -EEGGGTTTS-----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTT
T ss_pred             -CCHHHHhcC-----------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeeccccc
Confidence             688766521                 48899999999999999999999999999999999999999999999999998


Q ss_pred             CCCcc--cccceeeeeecccCCC
Q psy2674         155 DTYQK--EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~--~~~~~~~~~~pe~~~~  175 (183)
                      .....  ...++++|+|||++.+
T Consensus       175 ~~~~~~~~~~~t~~y~aPE~~~~  197 (353)
T 3coi_A          175 HADAEMTGYVVTRWYRAPEVILS  197 (353)
T ss_dssp             C--------CCSBCCSCHHHHSC
T ss_pred             CCCCCccccccCcCcCCHHHHhC
Confidence            65432  4567899999999876

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=5.4e-29  Score=183.85  Aligned_cols=155  Identities=18%  Similarity=0.268  Sum_probs=124.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++....   .+|+|++.. .......+.+.+|+.+++.++|+||++++++. ..+..++++||+++++|.+
T Consensus        33 G~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~  108 (289)
T 3og7_A           33 GSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYH  108 (289)
T ss_dssp             EECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHH
T ss_pred             cCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHH
Confidence            445678899886544   499999873 44566677899999999999999999999965 5567899999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      .+.....              .+++..++.++.|++.||.+||+++++|+||||+||+++.++.++|+|||++.....  
T Consensus       109 ~l~~~~~--------------~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~  174 (289)
T 3og7_A          109 HLHASET--------------KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWS  174 (289)
T ss_dssp             HHTTC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---------
T ss_pred             HHhhccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccc
Confidence            9865432              588999999999999999999999999999999999999999999999999875432  


Q ss_pred             -----ccccceeeeeecccCC
Q psy2674         159 -----KEYYKYRWVICSNIAE  174 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~  174 (183)
                           ....+++.|+|||++.
T Consensus       175 ~~~~~~~~~gt~~y~aPE~~~  195 (289)
T 3og7_A          175 GSHQFEQLSGSILWMAPEVIR  195 (289)
T ss_dssp             ---------CCCTTCCHHHHC
T ss_pred             ccccccccCCCccccCchhhc
Confidence                 2345789999999986

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.96  E-value=4.9e-29  Score=184.21  Aligned_cols=162  Identities=19%  Similarity=0.201  Sum_probs=137.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.+..++..||+|.+..... ...+.+.+|+.+++.++||||+++++++.+.+..++++||+++++|.++
T Consensus        31 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~  109 (295)
T 2clq_A           31 GKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSAL  109 (295)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEEECCCC----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHH
T ss_pred             eecCcEEEEEEEECCCCeEEEEEEccCCch-HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHH
Confidence            445678899999999999999999875433 3345789999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCCCCCc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~~~~~--  158 (183)
                      +......            ..+++..++.++.|++.|+.+||+++++|+||+|+||+++. ++.++|+|||++.....  
T Consensus       110 l~~~~~~------------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~  177 (295)
T 2clq_A          110 LRSKWGP------------LKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN  177 (295)
T ss_dssp             HHHTTCC------------CTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred             HHhhccC------------CCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence            9765220            14678889999999999999999999999999999999987 89999999999975432  


Q ss_pred             ---ccccceeeeeecccCCCc
Q psy2674         159 ---KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~  176 (183)
                         ....++..|+|||++.+.
T Consensus       178 ~~~~~~~~~~~y~aPE~~~~~  198 (295)
T 2clq_A          178 PCTETFTGTLQYMAPEIIDKG  198 (295)
T ss_dssp             ---CCCCCCGGGCCHHHHHHG
T ss_pred             CcccccCCCccccChhhhcCC
Confidence               245678899999998653

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.4e-30  Score=196.40  Aligned_cols=159  Identities=17%  Similarity=0.228  Sum_probs=134.5

Q ss_pred             CCCCCceeeeccCC---CCcceEEEeeccCCC---CHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDP---QDTSVLMAKSLVHSK---DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~---~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-.++.||++...   .+++.||+|++....   .....+.+.+|+++++.+ +|+||+++++++.+++..+++|||++
T Consensus        63 G~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~  142 (355)
T 1vzo_A           63 GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYIN  142 (355)
T ss_dssp             EETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             ccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCC
Confidence            34567788888763   589999999986321   111223567899999999 79999999999999999999999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+++....               .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++.
T Consensus       143 ~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~  207 (355)
T 1vzo_A          143 GGELFTHLSQRE---------------RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK  207 (355)
T ss_dssp             SCBHHHHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             CCCHHHHHHHcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence            999999997763               48899999999999999999999999999999999999999999999999997


Q ss_pred             CCCcc------cccceeeeeecccCCC
Q psy2674         155 DTYQK------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~------~~~~~~~~~~pe~~~~  175 (183)
                      .....      ...+|+.|+|||++.+
T Consensus       208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~  234 (355)
T 1vzo_A          208 EFVADETERAYDFCGTIEYMAPDIVRG  234 (355)
T ss_dssp             ECCGGGGGGGCGGGSCCTTCCHHHHTT
T ss_pred             ecccCCCCcccCcccCcCccChhhhcC
Confidence            54322      3567999999999876

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.96  E-value=2e-29  Score=188.84  Aligned_cols=157  Identities=20%  Similarity=0.274  Sum_probs=130.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-------CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-------DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-.++.||++.+..+++.||+|++....       .......+.+|+++++.++||||+++++++..++ .++++||++
T Consensus        19 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~   97 (322)
T 2ycf_A           19 GSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELME   97 (322)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCT
T ss_pred             ecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCC
Confidence            44567899999999999999999986432       1223346789999999999999999999997654 899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC---ceEEeccc
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL---SVKISLSG  151 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~---~~ki~dfg  151 (183)
                      +++|.+.+....               .+++..++.++.|++.||.|||+++++|+||+|+||+++.++   .++|+|||
T Consensus        98 ~~~L~~~~~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg  162 (322)
T 2ycf_A           98 GGELFDKVVGNK---------------RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG  162 (322)
T ss_dssp             TEETHHHHSTTC---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCT
T ss_pred             CCcHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCc
Confidence            999999886543               488999999999999999999999999999999999998655   49999999


Q ss_pred             CCCCCCcc----cccceeeeeecccCC
Q psy2674         152 LSKDTYQK----EYYKYRWVICSNIAE  174 (183)
Q Consensus       152 ~a~~~~~~----~~~~~~~~~~pe~~~  174 (183)
                      ++......    ...+++.|+|||++.
T Consensus       163 ~~~~~~~~~~~~~~~gt~~y~aPE~~~  189 (322)
T 2ycf_A          163 HSKILGETSLMRTLCGTPTYLAPEVLV  189 (322)
T ss_dssp             TCEECCCCHHHHHHHSCCTTCCHHHHH
T ss_pred             cceecccccccccccCCcCccCchhhc
Confidence            99866543    345789999999963

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.96  E-value=5.8e-29  Score=183.40  Aligned_cols=160  Identities=15%  Similarity=0.133  Sum_probs=124.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHH-HHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEAL-HEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|.+......... +.+.++...++.++||||+++++++.+++..++++||++ ++|.+
T Consensus        16 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~   94 (290)
T 3fme_A           16 GRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDK   94 (290)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-EEHHH
T ss_pred             CCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-cchHH
Confidence            4557889999999999999999999855444333 344455556788899999999999999999999999998 68888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ++.....           ....+++..++.++.|++.|+.|||++ |++|+||||+||+++.++.++|+|||++......
T Consensus        95 ~l~~~~~-----------~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T 3fme_A           95 FYKQVID-----------KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD  163 (290)
T ss_dssp             HHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred             HHHHHHh-----------cCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence            7765321           112589999999999999999999998 9999999999999999999999999999755433


Q ss_pred             ----cccceeeeeecccC
Q psy2674         160 ----EYYKYRWVICSNIA  173 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~  173 (183)
                          ...+++.|+|||++
T Consensus       164 ~~~~~~~~t~~y~aPE~~  181 (290)
T 3fme_A          164 VAKDIDAGCKPYMAPERI  181 (290)
T ss_dssp             ------CCCCCCSCHHHH
T ss_pred             ccccccCCCccccChhhc
Confidence                34678899999996

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.96  E-value=1.1e-28  Score=184.01  Aligned_cols=169  Identities=21%  Similarity=0.386  Sum_probs=129.1

Q ss_pred             CCCCCceeeeccCC---CCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC-----ccEEEEee
Q psy2674           2 SLIPNARGLKASDP---QDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD-----PHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~---~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~   72 (183)
                      |.-.++.||++...   .++..||+|.+... ......+.+.+|+..++.++||||+++++++.+.+     ..++++||
T Consensus        43 g~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~  122 (313)
T 3brb_A           43 GEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF  122 (313)
T ss_dssp             EC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEEC
T ss_pred             eecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEec
Confidence            34456778876543   46779999999743 45556678999999999999999999999998754     35999999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      +++++|.+++......         .....+++..++.++.|++.||.|||+++++|+||||+||+++.++.++|+|||+
T Consensus       123 ~~~~~L~~~l~~~~~~---------~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~  193 (313)
T 3brb_A          123 MKYGDLHTYLLYSRLE---------TGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGL  193 (313)
T ss_dssp             CTTCBHHHHHHHTTBT---------TSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSC
T ss_pred             ccCCCHHHHHHHhhhh---------cCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCc
Confidence            9999999998654210         0113589999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc-------cccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +......       ...+++.|+|||++.+..++
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  227 (313)
T 3brb_A          194 SKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYT  227 (313)
T ss_dssp             C----------------CCGGGSCHHHHHSSCCC
T ss_pred             ceecccccccCcccccCCCccccCchhhcCCCcc
Confidence            9865432       23346789999998876653

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.96  E-value=9.7e-29  Score=199.34  Aligned_cols=167  Identities=19%  Similarity=0.246  Sum_probs=143.8

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec------CCccEEEEeeCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD------GDPHYLLLEYTD   74 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~lv~e~~~   74 (183)
                      +|.-.+|.||++.+..+++.||+|++.........+.+.+|+++++.++||||+++++++..      .+..+++|||++
T Consensus        22 LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~  101 (676)
T 3qa8_A           22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCE  101 (676)
T ss_dssp             CCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCS
T ss_pred             EeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCC
Confidence            35677889999999999999999999876677777889999999999999999999999765      667899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc---eEEeccc
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS---VKISLSG  151 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~---~ki~dfg  151 (183)
                      +++|.+++......            ..+++..++.++.|++.|+.|||++|++|+||+|+||+++.++.   ++|+|||
T Consensus       102 ggsL~~~L~~~~~~------------~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG  169 (676)
T 3qa8_A          102 GGDLRKYLNQFENC------------CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLG  169 (676)
T ss_dssp             SCBHHHHHHSSSCT------------TCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred             CCCHHHHHHhcccC------------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence            99999999764321            24788899999999999999999999999999999999986554   9999999


Q ss_pred             CCCCCCcc----cccceeeeeecccCCCcccc
Q psy2674         152 LSKDTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       152 ~a~~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++......    ...++..|+|||++.+.+++
T Consensus       170 ~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s  201 (676)
T 3qa8_A          170 YAKELDQGELCTEFVGTLQYLAPELLEQKKYT  201 (676)
T ss_dssp             CCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCS
T ss_pred             cccccccccccccccCCcccCChHHhccCCCC
Confidence            99865443    35678999999999887664

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.96  E-value=1.4e-29  Score=187.64  Aligned_cols=153  Identities=18%  Similarity=0.277  Sum_probs=125.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhc--CCCcceeeEEeEEec----CCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCK--LDHAHVVKMIGICRD----GDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~~i~~~~~~~~~----~~~~~lv~e~~~~   75 (183)
                      |.-.++.||++..  +++.||+|++....    ...+.+|.+++..  ++||||+++++++.+    ....++++||+++
T Consensus        17 g~G~~g~V~~~~~--~~~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~   90 (301)
T 3q4u_A           17 GKGRYGEVWRGSW--QGENVAVKIFSSRD----EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEM   90 (301)
T ss_dssp             EECSSEEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTT
T ss_pred             ccCCCcEEEEEEE--CCEEEEEEEecccc----chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccC
Confidence            4456788998876  68999999986432    2345556666655  799999999998754    2458899999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCceecccccceeEeccCCceEE
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS--------DKRLIHKDIAARNCLISSDLSVKI  147 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~ivH~di~~~nil~~~~~~~ki  147 (183)
                      ++|.+++...                .+++..++.++.|++.|+.|||        +.+++||||||+||+++.++.+||
T Consensus        91 g~L~~~l~~~----------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl  154 (301)
T 3q4u_A           91 GSLYDYLQLT----------------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCI  154 (301)
T ss_dssp             CBHHHHHTTC----------------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEE
T ss_pred             CCHHHHHhhc----------------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEE
Confidence            9999999543                5889999999999999999999        999999999999999999999999


Q ss_pred             ecccCCCCCCc---------ccccceeeeeecccCCCc
Q psy2674         148 SLSGLSKDTYQ---------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       148 ~dfg~a~~~~~---------~~~~~~~~~~~pe~~~~~  176 (183)
                      +|||++.....         ....+|+.|+|||++.+.
T Consensus       155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  192 (301)
T 3q4u_A          155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDET  192 (301)
T ss_dssp             CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTC
T ss_pred             eeCCCeeecccccccccccccccccccceeChhhhcCc
Confidence            99999864322         234678999999998875

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.96  E-value=9.7e-29  Score=200.62  Aligned_cols=162  Identities=26%  Similarity=0.342  Sum_probs=136.4

Q ss_pred             CCCCCceeeeccCCC---CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQ---DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.+|.||++....   .+..||+|.+.........+.+.+|+.+++.++||||+++++++. ++..+++|||+++++|
T Consensus       399 G~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L  477 (656)
T 2j0j_A          399 GEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL  477 (656)
T ss_dssp             ECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBH
T ss_pred             eeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcH
Confidence            445678888886643   467899999887667777778999999999999999999999985 4678999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||++.....
T Consensus       478 ~~~l~~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~  543 (656)
T 2j0j_A          478 RSFLQVRKF--------------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  543 (656)
T ss_dssp             HHHHHHTTT--------------TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred             HHHHHhccC--------------CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence            999976532              588999999999999999999999999999999999999999999999999986644


Q ss_pred             cc------ccceeeeeecccCCCccc
Q psy2674         159 KE------YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ~~------~~~~~~~~~pe~~~~~~~  178 (183)
                      ..      ..++..|+|||++.+.+|
T Consensus       544 ~~~~~~~~~~~t~~y~aPE~~~~~~~  569 (656)
T 2j0j_A          544 STYYKASKGKLPIKWMAPESINFRRF  569 (656)
T ss_dssp             ----------CCGGGCCHHHHHHCCC
T ss_pred             CcceeccCCCCCcceeCHHHhcCCCC
Confidence            32      233568999999876655

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.96  E-value=3.5e-29  Score=195.64  Aligned_cols=160  Identities=20%  Similarity=0.261  Sum_probs=133.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++... ++..||+|.+.....  ..+.+.+|+.+++.++||||+++++++. .+..+++|||+++++|.++
T Consensus       197 G~G~fg~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~  272 (454)
T 1qcf_A          197 GAGQFGEVWMATYN-KHTKVAVKTMKPGSM--SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDF  272 (454)
T ss_dssp             ECCSSEEEEEEEET-TTEEEEEEEECTTSB--CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHH
T ss_pred             ccCCceEEEEEEEC-CccEEEEEEecCCCc--cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHH
Confidence            45567889988765 467899999975432  2457899999999999999999999986 5679999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+++...... 
T Consensus       273 l~~~~~-------------~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~  339 (454)
T 1qcf_A          273 LKSDEG-------------SKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY  339 (454)
T ss_dssp             HHSHHH-------------HTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH
T ss_pred             HHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce
Confidence            975432             147888999999999999999999999999999999999999999999999998654432 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||++.+..|
T Consensus       340 ~~~~~~~~~~~y~aPE~~~~~~~  362 (454)
T 1qcf_A          340 TAREGAKFPIKWTAPEAINFGSF  362 (454)
T ss_dssp             HTTCSSSSCGGGSCHHHHHHCCC
T ss_pred             eccCCCcccccccCHHHhccCCC
Confidence                 223567999999876554

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.96  E-value=9.3e-29  Score=185.56  Aligned_cols=152  Identities=17%  Similarity=0.242  Sum_probs=131.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEec--CCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRD--GDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L   78 (183)
                      |.-.+|.||++.+..+++.||+|++....    .+.+.+|+.+++.++ |+||+++++++.+  ....+++|||+++++|
T Consensus        45 g~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l  120 (330)
T 3nsz_A           45 GRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF  120 (330)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEECSCC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCH
T ss_pred             cccCCeEEEEEEECCCCcEEEEEEecccc----hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhH
Confidence            44578899999999999999999987432    246889999999996 9999999999987  5678999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-ceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-SVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-~~ki~dfg~a~~~~  157 (183)
                      .+++.                  .+++..++.++.|++.||.|||+++++||||||+||+++.++ .++|+|||++....
T Consensus       121 ~~~~~------------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~  182 (330)
T 3nsz_A          121 KQLYQ------------------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  182 (330)
T ss_dssp             HHHGG------------------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred             HHHHH------------------hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence            98873                  378889999999999999999999999999999999998666 89999999997544


Q ss_pred             c----ccccceeeeeecccCCC
Q psy2674         158 Q----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~----~~~~~~~~~~~pe~~~~  175 (183)
                      .    ....++.+|+|||++.+
T Consensus       183 ~~~~~~~~~~~~~y~aPE~~~~  204 (330)
T 3nsz_A          183 PGQEYNVRVASRYFKGPELLVD  204 (330)
T ss_dssp             TTCCCCSCCSCGGGCCHHHHTT
T ss_pred             CCCccccccccccccChhhhcC
Confidence            3    24567889999999876

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=4.6e-29  Score=191.11  Aligned_cols=159  Identities=19%  Similarity=0.247  Sum_probs=130.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------------------
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------------------   63 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------------------   63 (183)
                      |.-.+|.||++.+..+++.||+|++.....     ...+|+++++.++||||+++++++...                  
T Consensus        16 G~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~   90 (383)
T 3eb0_A           16 GTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLG   90 (383)
T ss_dssp             ECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC------------------
T ss_pred             EeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccccc
Confidence            556789999999999999999999864322     234799999999999999999998543                  


Q ss_pred             --------------------CccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh
Q psy2674          64 --------------------DPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS  123 (183)
Q Consensus        64 --------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh  123 (183)
                                          ...+++|||++ ++|.+.+.....           ....+++..++.++.|++.||.|||
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-----------~~~~l~~~~~~~i~~qi~~aL~~LH  158 (383)
T 3eb0_A           91 GKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIR-----------SGRSIPMNLISIYIYQLFRAVGFIH  158 (383)
T ss_dssp             -------------------CCEEEEEECCCS-EEHHHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHh-----------cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence                                23789999998 688887765322           1125899999999999999999999


Q ss_pred             cCCceecccccceeEec-cCCceEEecccCCCCCCc----ccccceeeeeecccCCCcc
Q psy2674         124 DKRLIHKDIAARNCLIS-SDLSVKISLSGLSKDTYQ----KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       124 ~~~ivH~di~~~nil~~-~~~~~ki~dfg~a~~~~~----~~~~~~~~~~~pe~~~~~~  177 (183)
                      ++|++||||||+||+++ .++.+||+|||+|.....    ....++++|+|||++.+..
T Consensus       159 ~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~  217 (383)
T 3eb0_A          159 SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGAT  217 (383)
T ss_dssp             TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCS
T ss_pred             HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCC
Confidence            99999999999999997 689999999999985433    2456789999999987643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=2.6e-29  Score=183.69  Aligned_cols=159  Identities=20%  Similarity=0.318  Sum_probs=123.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC---HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD---DEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+.  +..+|+|++.....   ....+.+.+|+++++.++||||+++++++.+++..+++|||+++++|
T Consensus        16 g~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   93 (271)
T 3dtc_A           16 GIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL   93 (271)
T ss_dssp             EEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEH
T ss_pred             ccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCH
Confidence            34467888888754  88999999874322   22345788999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---ceecccccceeEecc--------CCceEE
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR---LIHKDIAARNCLISS--------DLSVKI  147 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~---ivH~di~~~nil~~~--------~~~~ki  147 (183)
                      .+++...                .+++..++.++.|++.|+.+||+++   ++|+||||+||+++.        ++.++|
T Consensus        94 ~~~~~~~----------------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl  157 (271)
T 3dtc_A           94 NRVLSGK----------------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKI  157 (271)
T ss_dssp             HHHHTSS----------------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEE
T ss_pred             HHHhhcC----------------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEE
Confidence            9988532                5889999999999999999999999   899999999999985        778999


Q ss_pred             ecccCCCCCCcc---cccceeeeeecccCCCccc
Q psy2674         148 SLSGLSKDTYQK---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       148 ~dfg~a~~~~~~---~~~~~~~~~~pe~~~~~~~  178 (183)
                      +|||++......   ...+++.|+|||++.+..+
T Consensus       158 ~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  191 (271)
T 3dtc_A          158 TDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMF  191 (271)
T ss_dssp             CCCCC-------------CCGGGSCHHHHHHCCC
T ss_pred             ccCCcccccccccccCCCCccceeCHHHhccCCC
Confidence            999999754432   4567889999999877654

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.96  E-value=1.6e-29  Score=206.30  Aligned_cols=157  Identities=18%  Similarity=0.211  Sum_probs=133.7

Q ss_pred             CCCCCceeeeccCCC-CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc-----cEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQ-DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP-----HYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-----~~lv~e~~~~   75 (183)
                      |.-.++.||++.+.. +++.||+|++....+......+.+|+++++.++||||+++++++.+.+.     .+++|||+++
T Consensus        89 g~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g  168 (681)
T 2pzi_A           89 AHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGG  168 (681)
T ss_dssp             EEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCC
T ss_pred             eeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCC
Confidence            344678899998876 7899999999876667777788999999999999999999999987665     6999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+..                 .+++..++.++.|++.+|.|||++||+||||||+||+++.+ .+||+|||++..
T Consensus       169 ~~L~~~~~~-----------------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~  230 (681)
T 2pzi_A          169 QSLKRSKGQ-----------------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSR  230 (681)
T ss_dssp             EECC----C-----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred             CcHHHHHhC-----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchh
Confidence            999876643                 38899999999999999999999999999999999999875 899999999986


Q ss_pred             CCcc-cccceeeeeecccCCCc
Q psy2674         156 TYQK-EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       156 ~~~~-~~~~~~~~~~pe~~~~~  176 (183)
                      .... ...+|+.|+|||++.+.
T Consensus       231 ~~~~~~~~gt~~y~aPE~~~~~  252 (681)
T 2pzi_A          231 INSFGYLYGTPGFQAPEIVRTG  252 (681)
T ss_dssp             TTCCSCCCCCTTTSCTTHHHHC
T ss_pred             cccCCccCCCccccCHHHHcCC
Confidence            6543 45689999999998654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.96  E-value=4.3e-29  Score=193.44  Aligned_cols=158  Identities=18%  Similarity=0.200  Sum_probs=127.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~   75 (183)
                      |.-.++.||++.+..+++.||+|++.....     ...+|+++++.++|+||+++++++...      ..+++++||++ 
T Consensus        63 G~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~-  136 (420)
T 1j1b_A           63 GNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVP-  136 (420)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCC-
T ss_pred             eeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccc-
Confidence            445788999999999999999999864321     234799999999999999999998542      13679999998 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGLSK  154 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~a~  154 (183)
                      ++|.+.+.....           ....+++..++.++.|++.||.|||+++|+||||||+|||++. .+.+||+|||+++
T Consensus       137 ~~l~~~~~~~~~-----------~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~  205 (420)
T 1j1b_A          137 ETVYRVARHYSR-----------AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  205 (420)
T ss_dssp             EEHHHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             ccHHHHHHHHhh-----------ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhh
Confidence            577776654321           1125889999999999999999999999999999999999985 4678999999998


Q ss_pred             CCCc----ccccceeeeeecccCCCc
Q psy2674         155 DTYQ----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       155 ~~~~----~~~~~~~~~~~pe~~~~~  176 (183)
                      ....    ..+.++++|+|||++.+.
T Consensus       206 ~~~~~~~~~~~~~t~~y~aPE~~~~~  231 (420)
T 1j1b_A          206 QLVRGEPNVSYICSRYYRAPELIFGA  231 (420)
T ss_dssp             ECCTTCCCCSCCSCTTSCCHHHHTTC
T ss_pred             hcccCCCceeeeeCCCcCCHHHHcCC
Confidence            5432    246779999999998764

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=6e-29  Score=194.27  Aligned_cols=160  Identities=23%  Similarity=0.266  Sum_probs=129.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.... +..||+|.+......  .+.+.+|+++++.++||||+++++++.+ +..+++|||+++++|.++
T Consensus       193 G~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~  268 (452)
T 1fmk_A          193 GQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF  268 (452)
T ss_dssp             EECSSCEEEEEEETT-TEEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHH
T ss_pred             cCCCCeEEEEEEECC-CceEEEEEeccCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHH
Confidence            345678888887765 466999999754322  3478999999999999999999999876 778999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+++...... 
T Consensus       269 l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~  335 (452)
T 1fmk_A          269 LKGETG-------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  335 (452)
T ss_dssp             HSHHHH-------------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             HHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce
Confidence            975422             248899999999999999999999999999999999999999999999999998654332 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||++.+..+
T Consensus       336 ~~~~~~~~~~~y~aPE~~~~~~~  358 (452)
T 1fmk_A          336 TARQGAKFPIKWTAPEAALYGRF  358 (452)
T ss_dssp             -------CCGGGSCHHHHHHCCC
T ss_pred             ecccCCcccccccCHhHHhcCCC
Confidence                 223567999999876554

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=6.6e-29  Score=187.75  Aligned_cols=161  Identities=16%  Similarity=0.045  Sum_probs=130.5

Q ss_pred             CCCCCceeeeccCCC---CcceEEEeeccCCCCHHH----------HHHHHHHHHHHhcCCCcceeeEEeEEec----CC
Q psy2674           2 SLIPNARGLKASDPQ---DTSVLMAKSLVHSKDDEA----------LHEFKREIDLFCKLDHAHVVKMIGICRD----GD   64 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~---~~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~   64 (183)
                      |.-.++.||++.+..   ++..+|+|+.........          ...+.+|+..++.++||||+++++++.+    ..
T Consensus        46 g~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~  125 (345)
T 2v62_A           46 GSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRS  125 (345)
T ss_dssp             ------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEESSSCE
T ss_pred             eecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccccccCCCc
Confidence            455678899998887   899999999875543211          1235678888999999999999999987    67


Q ss_pred             ccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC-
Q psy2674          65 PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL-  143 (183)
Q Consensus        65 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~-  143 (183)
                      ..+++|||+ +++|.+++...+               .+++..++.++.|++.||.|||+++++||||||+||+++.++ 
T Consensus       126 ~~~lv~e~~-~~~L~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~  189 (345)
T 2v62_A          126 YRFMVMERL-GIDLQKISGQNG---------------TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNP  189 (345)
T ss_dssp             EEEEEEECE-EEEHHHHCBGGG---------------BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSST
T ss_pred             EEEEEEecc-CCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCC
Confidence            899999999 899999987653               489999999999999999999999999999999999998777 


Q ss_pred             -ceEEecccCCCCCCc------------ccccceeeeeecccCCCccc
Q psy2674         144 -SVKISLSGLSKDTYQ------------KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       144 -~~ki~dfg~a~~~~~------------~~~~~~~~~~~pe~~~~~~~  178 (183)
                       .+||+|||+++....            ....++..|+|||++.+..+
T Consensus       190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  237 (345)
T 2v62_A          190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVAL  237 (345)
T ss_dssp             TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCC
T ss_pred             CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCC
Confidence             999999999975432            23467889999999887655

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.96  E-value=7.4e-29  Score=182.90  Aligned_cols=159  Identities=23%  Similarity=0.336  Sum_probs=135.8

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      .-.++.||++.+..+++.||+|++... ......+.+.+|+++++.++||||+++++++.+.+..++++|++++++|.+.
T Consensus        32 ~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  111 (287)
T 2wei_A           32 KGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDE  111 (287)
T ss_dssp             EETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHH
T ss_pred             CCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHH
Confidence            346788999999999999999998632 2223345788999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---CCceEEecccCCCCCCc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---~~~~ki~dfg~a~~~~~  158 (183)
                      +....               .+++..++.++.|++.|+.+||+++++|+||+|+||+++.   ...++|+|||++.....
T Consensus       112 l~~~~---------------~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~  176 (287)
T 2wei_A          112 IIKRK---------------RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ  176 (287)
T ss_dssp             HHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred             HHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence            87653               4889999999999999999999999999999999999965   34799999999875443


Q ss_pred             c----cccceeeeeecccCCCc
Q psy2674         159 K----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ~----~~~~~~~~~~pe~~~~~  176 (183)
                      .    ...+++.|+|||++.+.
T Consensus       177 ~~~~~~~~~~~~y~aPE~~~~~  198 (287)
T 2wei_A          177 NTKMKDRIGTAYYIAPEVLRGT  198 (287)
T ss_dssp             CSSCSCHHHHHTTCCHHHHTTC
T ss_pred             CCccccccCcccccChHHhcCC
Confidence            2    34568899999998764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.96  E-value=2.6e-28  Score=182.05  Aligned_cols=156  Identities=26%  Similarity=0.362  Sum_probs=128.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEe--------------cCCccE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICR--------------DGDPHY   67 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------------~~~~~~   67 (183)
                      |.-.++.||++.+..+++.||+|.+... +....+.+.+|+++++.++||||+++++++.              +....+
T Consensus        20 g~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (320)
T 2i6l_A           20 GCGGNGLVFSAVDNDCDKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY   98 (320)
T ss_dssp             C-----CEEEEEETTTTEEEEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEE
T ss_pred             ccCCCeEEEEEEECCCCeEEEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCcee
Confidence            5567789999999999999999998744 4555678899999999999999999999874              335689


Q ss_pred             EEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-cCCceE
Q psy2674          68 LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSVK  146 (183)
Q Consensus        68 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-~~~~~k  146 (183)
                      +++||++ ++|.+++...                .+++..++.++.|++.|+.+||+++++|+||||+||+++ .++.+|
T Consensus        99 lv~e~~~-~~L~~~~~~~----------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~k  161 (320)
T 2i6l_A           99 IVQEYME-TDLANVLEQG----------------PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLK  161 (320)
T ss_dssp             EEEECCS-EEHHHHHTTC----------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEE
T ss_pred             EEeeccC-CCHHHHhhcC----------------CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEE
Confidence            9999998 7999988542                488999999999999999999999999999999999997 567999


Q ss_pred             EecccCCCCCCc--------ccccceeeeeecccCCC
Q psy2674         147 ISLSGLSKDTYQ--------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       147 i~dfg~a~~~~~--------~~~~~~~~~~~pe~~~~  175 (183)
                      |+|||++.....        ....++.+|+|||++.+
T Consensus       162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  198 (320)
T 2i6l_A          162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLS  198 (320)
T ss_dssp             ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHC
T ss_pred             EccCccccccCCCcccccccccccccccccCcHHhcC
Confidence            999999986532        23455889999998754

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.96  E-value=2.1e-28  Score=183.78  Aligned_cols=158  Identities=20%  Similarity=0.260  Sum_probs=121.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEe--------cCCccEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICR--------DGDPHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~--------~~~~~~lv~e~   72 (183)
                      |.-.++.||++.+..+++.||+|.+... .....+.+.+|+..++.+. ||||+++++++.        ....+++++||
T Consensus        37 g~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~  115 (337)
T 3ll6_A           37 AEGGFAFVYEAQDVGSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTEL  115 (337)
T ss_dssp             ECCSSEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEEC
T ss_pred             ccCCceEEEEEEECCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEe
Confidence            4557889999999999999999998543 3445567899999999995 999999999984        23347899999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ceecccccceeEeccCCceEEecc
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLISSDLSVKISLS  150 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--ivH~di~~~nil~~~~~~~ki~df  150 (183)
                      ++ ++|.+++......            ..+++..++.++.|++.||.|||+++  ++|+||||+||+++.++.++|+||
T Consensus       116 ~~-g~L~~~l~~~~~~------------~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Df  182 (337)
T 3ll6_A          116 CK-GQLVEFLKKMESR------------GPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF  182 (337)
T ss_dssp             CS-EEHHHHHHHHHTT------------CSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred             cC-CCHHHHHHHhhcc------------CCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecC
Confidence            97 8999988764221            25899999999999999999999999  999999999999999999999999


Q ss_pred             cCCCCCCcc-----------------cccceeeeeecccC
Q psy2674         151 GLSKDTYQK-----------------EYYKYRWVICSNIA  173 (183)
Q Consensus       151 g~a~~~~~~-----------------~~~~~~~~~~pe~~  173 (183)
                      |++......                 ...+++.|+|||++
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (337)
T 3ll6_A          183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII  222 (337)
T ss_dssp             TTCBCCSSCC------------------------------
T ss_pred             ccceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence            999865432                 33478899999998

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.96  E-value=1.9e-28  Score=180.74  Aligned_cols=162  Identities=23%  Similarity=0.244  Sum_probs=126.9

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++..   ...+..||+|++...  ......+.+.+|++.++.++||||+++++++.++. .++++||++++
T Consensus        27 g~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~  105 (291)
T 1u46_A           27 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLG  105 (291)
T ss_dssp             C----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTC
T ss_pred             cCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCC
Confidence            4456677888764   233457999998743  23445678899999999999999999999998754 88999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++...
T Consensus       106 ~L~~~l~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  171 (291)
T 1u46_A          106 SLLDRLRKHQG--------------HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  171 (291)
T ss_dssp             BHHHHHHHHGG--------------GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             CHHHHHHhccC--------------CcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence            99999987533              5889999999999999999999999999999999999999999999999999865


Q ss_pred             Ccc--------cccceeeeeecccCCCccc
Q psy2674         157 YQK--------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       157 ~~~--------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ...        ...++..|+|||++.+..+
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  201 (291)
T 1u46_A          172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTF  201 (291)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEE
T ss_pred             cccccchhhhccCCCCceeeCchhhcCCCC
Confidence            432        2234567999999877654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=2.9e-28  Score=182.82  Aligned_cols=162  Identities=13%  Similarity=0.179  Sum_probs=122.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHH-HHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREID-LFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++...........+.+|+. +++.++||||+++++++.+++..+++|||++ ++|.+
T Consensus        31 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~-~~l~~  109 (327)
T 3aln_A           31 GRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMS-TSFDK  109 (327)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCS-EEHHH
T ss_pred             ccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecC-CChHH
Confidence            445778999999999999999999986655555556666766 6777799999999999999999999999998 68888


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ++......          ....+++..+..++.|++.|+.+||++ +++|+||+|+||+++.++.+||+|||++......
T Consensus       110 ~~~~~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~  179 (327)
T 3aln_A          110 FYKYVYSV----------LDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS  179 (327)
T ss_dssp             HHHHHHHT----------TCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred             HHHHHHhh----------hcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence            87643210          012588999999999999999999999 9999999999999999999999999999865433


Q ss_pred             ----cccceeeeeecccCC
Q psy2674         160 ----EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~  174 (183)
                          ...+++.|+|||++.
T Consensus       180 ~~~~~~~gt~~y~aPE~~~  198 (327)
T 3aln_A          180 IAKTRDAGCRPYMAPERID  198 (327)
T ss_dssp             -------------------
T ss_pred             cccccCCCCccccCceeec
Confidence                236788999999983

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.96  E-value=1.3e-28  Score=184.52  Aligned_cols=158  Identities=18%  Similarity=0.330  Sum_probs=131.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEec------CCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRD------GDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~------~~~~~lv~e~~~   74 (183)
                      |.-.++.||++.+..+++.||+|++......  .+.+.+|+..++.+ +||||+++++++..      .+..+++|||++
T Consensus        33 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~  110 (326)
T 2x7f_A           33 GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCG  110 (326)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECCSST--THHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCT
T ss_pred             ccCCCEEEEEEEECCCCCeEEEEEEecCccc--HHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCC
Confidence            3346788999999999999999998744322  24688999999998 89999999999976      457899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+++.....             ..+++..++.++.|++.||.+||++|++|+||+|+||+++.++.++|+|||++.
T Consensus       111 ~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~  177 (326)
T 2x7f_A          111 AGSVTDLIKNTKG-------------NTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  177 (326)
T ss_dssp             TEEHHHHHHHSGG-------------GCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC
T ss_pred             CCcHHHHHHhccc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCce
Confidence            8999999986532             258899999999999999999999999999999999999999999999999987


Q ss_pred             CCCc-----ccccceeeeeecccCC
Q psy2674         155 DTYQ-----KEYYKYRWVICSNIAE  174 (183)
Q Consensus       155 ~~~~-----~~~~~~~~~~~pe~~~  174 (183)
                      ....     ....+++.|+|||++.
T Consensus       178 ~~~~~~~~~~~~~~~~~y~aPE~~~  202 (326)
T 2x7f_A          178 QLDRTVGRRNTFIGTPYWMAPEVIA  202 (326)
T ss_dssp             -------------CCGGGCCHHHHC
T ss_pred             ecCcCccccccccCCccccChhhhc
Confidence            5432     2456789999999986

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.96  E-value=5.5e-29  Score=189.11  Aligned_cols=158  Identities=20%  Similarity=0.301  Sum_probs=125.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC----------CHHHHHHHHHHHHHHhcCCCcceeeEEeEEec-----CCcc
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK----------DDEALHEFKREIDLFCKLDHAHVVKMIGICRD-----GDPH   66 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~----------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~~~   66 (183)
                      |.-.++.||++.+.. +..||+|.+....          +....+.+.+|+++++.++||||+++++++..     ....
T Consensus        31 g~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~  109 (362)
T 3pg1_A           31 SSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKL  109 (362)
T ss_dssp             EEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEE
T ss_pred             ccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceE
Confidence            345678899998765 9999999986321          23345688999999999999999999999854     2357


Q ss_pred             EEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceE
Q psy2674          67 YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK  146 (183)
Q Consensus        67 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~k  146 (183)
                      +++|||++ ++|.+.+.....              .+++..++.++.|++.||.|||+++++|+||||+||+++.++.++
T Consensus       110 ~lv~e~~~-~~l~~~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~k  174 (362)
T 3pg1_A          110 YLVTELMR-TDLAQVIHDQRI--------------VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDIT  174 (362)
T ss_dssp             EEEEECCS-EEHHHHHHCTTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEE
T ss_pred             EEEEccCC-CCHHHHHHhccc--------------CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEE
Confidence            99999998 788888875432              589999999999999999999999999999999999999999999


Q ss_pred             EecccCCCCCCcc----cccceeeeeecccCCC
Q psy2674         147 ISLSGLSKDTYQK----EYYKYRWVICSNIAEG  175 (183)
Q Consensus       147 i~dfg~a~~~~~~----~~~~~~~~~~pe~~~~  175 (183)
                      |+|||++......    ...++++|+|||++.+
T Consensus       175 l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~  207 (362)
T 3pg1_A          175 ICDFNLAREDTADANKTHYVTHRWYRAPELVMQ  207 (362)
T ss_dssp             ECCTTC---------------CGGGCCHHHHTT
T ss_pred             EEecCcccccccccccceecccceecCcHHhcC
Confidence            9999999754332    4567899999999876

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.96  E-value=8.1e-29  Score=189.89  Aligned_cols=162  Identities=20%  Similarity=0.209  Sum_probs=134.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC--------CcceeeEEeEEe----cCCccEEE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD--------HAHVVKMIGICR----DGDPHYLL   69 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------h~~i~~~~~~~~----~~~~~~lv   69 (183)
                      |.-.++.||++.+..+++.||+|++...  ....+.+.+|+.+++.++        |+||+++++.+.    +....+++
T Consensus        46 g~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv  123 (397)
T 1wak_A           46 GWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMV  123 (397)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEE
T ss_pred             eecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEE
Confidence            4456789999999999999999998633  445567889999999885        788999999987    45678999


Q ss_pred             EeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCC-----
Q psy2674          70 LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDL-----  143 (183)
Q Consensus        70 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~-----  143 (183)
                      |||++ ++|.+.+.....             ..+++..++.++.|++.||.|||++ |++||||||+|||++.++     
T Consensus       124 ~e~~~-~~l~~~~~~~~~-------------~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~  189 (397)
T 1wak_A          124 FEVLG-HHLLKWIIKSNY-------------QGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRR  189 (397)
T ss_dssp             ECCCC-CBHHHHHHHTTT-------------SCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHH
T ss_pred             EeccC-ccHHHHHHhccc-------------CCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhh
Confidence            99995 777776655421             2589999999999999999999998 999999999999998664     


Q ss_pred             --------------------------------------------ceEEecccCCCCCCc--ccccceeeeeecccCCCcc
Q psy2674         144 --------------------------------------------SVKISLSGLSKDTYQ--KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       144 --------------------------------------------~~ki~dfg~a~~~~~--~~~~~~~~~~~pe~~~~~~  177 (183)
                                                                  .++|+|||++.....  ....+|++|+|||++.+.+
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~~  269 (397)
T 1wak_A          190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG  269 (397)
T ss_dssp             HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTSC
T ss_pred             hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCChhhcCCC
Confidence                                                        799999999975543  3456799999999998876


Q ss_pred             cc
Q psy2674         178 LN  179 (183)
Q Consensus       178 ~~  179 (183)
                      |+
T Consensus       270 ~~  271 (397)
T 1wak_A          270 YN  271 (397)
T ss_dssp             CC
T ss_pred             CC
Confidence            64

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.8e-28  Score=184.27  Aligned_cols=154  Identities=17%  Similarity=0.288  Sum_probs=126.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC--CCcceeeEEeEEecC----CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL--DHAHVVKMIGICRDG----DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~h~~i~~~~~~~~~~----~~~~lv~e~~~~   75 (183)
                      |.-.++.||++...  ++.||+|++.....    ....+|.+++...  +||||+++++++.+.    ...+++|||+++
T Consensus        46 g~G~~g~V~~~~~~--~~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~  119 (337)
T 3mdy_A           46 GKGRYGEVWMGKWR--GEKVAVKVFFTTEE----ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHEN  119 (337)
T ss_dssp             EEETTEEEEEEEET--TEEEEEEEEEGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTT
T ss_pred             ecCCCeEEEEEEEC--CceEEEEEEecccc----chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCC
Confidence            33467788888764  89999999864321    2344555555554  899999999999876    678999999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CceecccccceeEeccCCceEE
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK--------RLIHKDIAARNCLISSDLSVKI  147 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~--------~ivH~di~~~nil~~~~~~~ki  147 (183)
                      ++|.+++...                .+++..++.++.|++.|+.|||++        +++||||||+||+++.++.+||
T Consensus       120 g~L~~~l~~~----------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl  183 (337)
T 3mdy_A          120 GSLYDYLKST----------------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCI  183 (337)
T ss_dssp             CBHHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEE
T ss_pred             CcHHHHhhcc----------------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEE
Confidence            9999999654                488999999999999999999998        9999999999999999999999


Q ss_pred             ecccCCCCCCcc---------cccceeeeeecccCCCcc
Q psy2674         148 SLSGLSKDTYQK---------EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       148 ~dfg~a~~~~~~---------~~~~~~~~~~pe~~~~~~  177 (183)
                      +|||++......         ...+|+.|+|||++.+..
T Consensus       184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  222 (337)
T 3mdy_A          184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL  222 (337)
T ss_dssp             CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCC
T ss_pred             EeCCCceeeccccccccCCCCCCccCcceeChhhccccc
Confidence            999999654332         346789999999987754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.95  E-value=2.6e-28  Score=183.28  Aligned_cols=162  Identities=14%  Similarity=0.149  Sum_probs=135.8

Q ss_pred             CCCCCceeeeccC-CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCc------ceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASD-PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHA------HVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~------~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-.++.||++.+ ..+++.||+|++...  ....+.+.+|+++++.++|+      +++++++++.+.+..+++|||+ 
T Consensus        23 g~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-   99 (339)
T 1z57_A           23 GEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-   99 (339)
T ss_dssp             EEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-
T ss_pred             ecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-
Confidence            3446788999987 568999999998643  34456788999999888655      4999999999999999999999 


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-------------
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-------------  141 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-------------  141 (183)
                      +++|.+++.....             ..+++..++.++.|++.||.|||+++++||||||+||+++.             
T Consensus       100 ~~~l~~~l~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~  166 (339)
T 1z57_A          100 GLSTYDFIKENGF-------------LPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKR  166 (339)
T ss_dssp             CCBHHHHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred             CCCHHHHHHhcCC-------------CCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccc
Confidence            6999999976542             24789999999999999999999999999999999999986             


Q ss_pred             ------CCceEEecccCCCCCCc--ccccceeeeeecccCCCcccc
Q psy2674         142 ------DLSVKISLSGLSKDTYQ--KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       142 ------~~~~ki~dfg~a~~~~~--~~~~~~~~~~~pe~~~~~~~~  179 (183)
                            ++.++|+|||++.....  ....+++.|+|||++.+.+++
T Consensus       167 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  212 (339)
T 1z57_A          167 DERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWS  212 (339)
T ss_dssp             EEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCC
T ss_pred             ccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCC
Confidence                  66899999999985443  345779999999999887654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.95  E-value=8.2e-29  Score=181.82  Aligned_cols=159  Identities=19%  Similarity=0.285  Sum_probs=126.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC-CccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG-DPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++..  ++..||+|.+....   ..+.+.+|+++++.++||||+++++++.++ +..++++||+++++|.+
T Consensus        30 g~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~  104 (278)
T 1byg_A           30 GKGEFGDVMLGDY--RGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD  104 (278)
T ss_dssp             EECSSCEEEEEEE--TTEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHH
T ss_pred             ecCCCceEEEEEE--cCCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHH
Confidence            3346678888865  48899999987543   234788999999999999999999997654 57899999999899999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++.....             ..+++..++.++.|++.++.+||+++++|+||+|+||+++.++.++|+|||++...... 
T Consensus       105 ~l~~~~~-------------~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~  171 (278)
T 1byg_A          105 YLRSRGR-------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  171 (278)
T ss_dssp             HHHHHHH-------------HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             HHHhccc-------------ccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccc
Confidence            9976532             13788999999999999999999999999999999999999999999999999855443 


Q ss_pred             -cccceeeeeecccCCCccc
Q psy2674         160 -EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 -~~~~~~~~~~pe~~~~~~~  178 (183)
                       ...++..|+|||++.+..+
T Consensus       172 ~~~~~~~~y~aPE~~~~~~~  191 (278)
T 1byg_A          172 DTGKLPVKWTAPEALREKKF  191 (278)
T ss_dssp             ----CCTTTSCHHHHHHCCC
T ss_pred             cCCCccccccCHHHhCCCCC
Confidence             3345678999999876554

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.95  E-value=1.5e-28  Score=181.59  Aligned_cols=159  Identities=17%  Similarity=0.151  Sum_probs=131.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEE-ecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++......   ..+.+|+.+++.++|++++..+..+ .+++..+++||++ +++|.+
T Consensus        18 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~   93 (296)
T 4hgt_A           18 GSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLED   93 (296)
T ss_dssp             EECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             cCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHH
Confidence            4457789999999999999999987643222   2578899999999877766665555 5677789999999 799999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe---ccCCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~---~~~~~~ki~dfg~a~~~~  157 (183)
                      ++.....              .+++..++.++.|++.|+.|||+++++|+||||+||++   +.++.+||+|||++....
T Consensus        94 ~~~~~~~--------------~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~  159 (296)
T 4hgt_A           94 LFNFCSR--------------KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             HHHHTTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             HHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceecc
Confidence            9976432              58999999999999999999999999999999999999   789999999999997543


Q ss_pred             cc------------cccceeeeeecccCCCccc
Q psy2674         158 QK------------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~------------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..            ...+++.|+|||++.+.++
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  192 (296)
T 4hgt_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQ  192 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCC
T ss_pred             CcccCccCCCCcccccCCCccccchHHhcCCCC
Confidence            32            3467899999999988766

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.95  E-value=1.2e-29  Score=191.74  Aligned_cols=169  Identities=17%  Similarity=0.142  Sum_probs=136.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--H--------------HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--D--------------EALHEFKREIDLFCKLDHAHVVKMIGICRDGDP   65 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--~--------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   65 (183)
                      |.-.++.||++.+  +++.||+|.+.....  .              ...+.+.+|+.+++.++||||+++++++.+++.
T Consensus        40 g~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~  117 (348)
T 2pml_X           40 NQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDE  117 (348)
T ss_dssp             ECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEESSSE
T ss_pred             cCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEeeCCe
Confidence            4456788999988  899999999863211  0              011578999999999999999999999999999


Q ss_pred             cEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCc
Q psy2674          66 HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLS  144 (183)
Q Consensus        66 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~  144 (183)
                      .+++|||+++++|.+++......       .......+++..++.++.|++.|+.+||+ +|++|+||+|+||+++.++.
T Consensus       118 ~~lv~e~~~~~~L~~~~~~~~~l-------~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~  190 (348)
T 2pml_X          118 VYIIYEYMENDSILKFDEYFFVL-------DKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR  190 (348)
T ss_dssp             EEEEEECCTTCBSSEESSSEESS-------CSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSC
T ss_pred             EEEEEeccCCCcHHHHHHHhhhh-------hhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCc
Confidence            99999999999998873211000       00012368999999999999999999999 99999999999999999999


Q ss_pred             eEEecccCCCCCCc---ccccceeeeeecccCCCc-ccc
Q psy2674         145 VKISLSGLSKDTYQ---KEYYKYRWVICSNIAEGR-RLN  179 (183)
Q Consensus       145 ~ki~dfg~a~~~~~---~~~~~~~~~~~pe~~~~~-~~~  179 (183)
                      ++|+|||++.....   ....++..|+|||++.+. .++
T Consensus       191 ~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  229 (348)
T 2pml_X          191 VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYN  229 (348)
T ss_dssp             EEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEE
T ss_pred             EEEeccccccccccccccCCCCCcCccCchhhcCCCCCC
Confidence            99999999986433   345678999999999886 443

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.95  E-value=2.6e-28  Score=181.77  Aligned_cols=159  Identities=21%  Similarity=0.283  Sum_probs=126.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++..  .++.||+|.+....   ..+.+.+|++.++.++||||+++++++.  +..+++|||+++++|.++
T Consensus        17 g~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~   89 (307)
T 2eva_A           17 GRGAFGVVCKAKW--RAKDVAIKQIESES---ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNV   89 (307)
T ss_dssp             ECCSSSEEEEEEE--TTEEEEEEECSSTT---HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHH
T ss_pred             ecCCCceEEEEEE--CCeeEEEEEecChh---HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHH
Confidence            4456788888865  47889999986432   3457899999999999999999999886  458999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCceecccccceeEeccCCc-eEEecccCCCCCC
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD---KRLIHKDIAARNCLISSDLS-VKISLSGLSKDTY  157 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---~~ivH~di~~~nil~~~~~~-~ki~dfg~a~~~~  157 (183)
                      +......            ..+++..++.++.|++.|+.|||+   ++++|+||||+||+++.++. +||+|||++....
T Consensus        90 l~~~~~~------------~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~  157 (307)
T 2eva_A           90 LHGAEPL------------PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ  157 (307)
T ss_dssp             HHCSSSE------------ECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----
T ss_pred             HhccCCC------------CccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccc
Confidence            9754321            147888999999999999999999   89999999999999987776 7999999997554


Q ss_pred             c--ccccceeeeeecccCCCcccc
Q psy2674         158 Q--KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~--~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .  ....++..|+|||++.+..++
T Consensus       158 ~~~~~~~gt~~y~aPE~~~~~~~~  181 (307)
T 2eva_A          158 THMTNNKGSAAWMAPEVFEGSNYS  181 (307)
T ss_dssp             -------CCTTSSCHHHHTCCCCC
T ss_pred             cccccCCCCCceEChhhhCCCCCC
Confidence            3  244678999999999886653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.95  E-value=3.4e-28  Score=180.58  Aligned_cols=161  Identities=22%  Similarity=0.293  Sum_probs=132.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC---CHHHHHHHHHHHHHHhcCCCcceeeEEeEEe--cCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK---DDEALHEFKREIDLFCKLDHAHVVKMIGICR--DGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--~~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.+..++..+|+|++....   .....+.+.+|+++++.++|+||+++++++.  +....+++|||++++
T Consensus        14 g~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~   93 (305)
T 2wtk_C           14 GEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG   93 (305)
T ss_dssp             EECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC
Confidence            44567889999999999999999987432   1234567899999999999999999999984  455789999999954


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                       |.+.+.....             ..+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++...
T Consensus        94 -l~~~~~~~~~-------------~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~  159 (305)
T 2wtk_C           94 -MQEMLDSVPE-------------KRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL  159 (305)
T ss_dssp             -HHHHHHHSTT-------------CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             -HHHHHHhCcc-------------cccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence             7777765432             25889999999999999999999999999999999999999999999999999754


Q ss_pred             Cc-------ccccceeeeeecccCCCc
Q psy2674         157 YQ-------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       157 ~~-------~~~~~~~~~~~pe~~~~~  176 (183)
                      ..       ....++..|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~  186 (305)
T 2wtk_C          160 HPFAADDTCRTSQGSPAFQPPEIANGL  186 (305)
T ss_dssp             CTTCSSCEECCCCSCGGGCCHHHHTCC
T ss_pred             CccccccccccCCCCCCCcChhhccCc
Confidence            32       234568899999998763

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.95  E-value=1.4e-28  Score=195.80  Aligned_cols=160  Identities=23%  Similarity=0.266  Sum_probs=132.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-.++.||++.... +..||+|++......  .+.+.+|+++++.++|+||+++++++.+ +..+++|||+++++|.++
T Consensus       276 G~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~  351 (535)
T 2h8h_A          276 GQGCFGEVWMGTWNG-TTRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDF  351 (535)
T ss_dssp             EECSSEEEEEEEETT-TEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHH
T ss_pred             ccCCCeEEEEEEECC-CceEEEEEeCCCCCC--HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHH
Confidence            345678888887765 466999999754322  3478999999999999999999999876 679999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc-
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE-  160 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~-  160 (183)
                      +.....             ..+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+++...... 
T Consensus       352 l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  418 (535)
T 2h8h_A          352 LKGETG-------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  418 (535)
T ss_dssp             HSHHHH-------------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH
T ss_pred             HhhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce
Confidence            975422             248899999999999999999999999999999999999999999999999998665432 


Q ss_pred             -----ccceeeeeecccCCCccc
Q psy2674         161 -----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 -----~~~~~~~~~pe~~~~~~~  178 (183)
                           ..++..|+|||++.+..|
T Consensus       419 ~~~~~~~~~~~y~aPE~~~~~~~  441 (535)
T 2h8h_A          419 TARQGAKFPIKWTAPEAALYGRF  441 (535)
T ss_dssp             HTTCSTTSCGGGSCHHHHHHCCC
T ss_pred             ecccCCcCcccccCHHHhccCCC
Confidence                 233567999999876554

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=5.5e-29  Score=188.62  Aligned_cols=157  Identities=15%  Similarity=0.140  Sum_probs=130.1

Q ss_pred             CCCCceeeeccCCC--------CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceee---------------EEeE
Q psy2674           3 LIPNARGLKASDPQ--------DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVK---------------MIGI   59 (183)
Q Consensus         3 ~~~~~~~~~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~---------------~~~~   59 (183)
                      .-.++.||++.+..        +++.||+|.+...      +.+.+|+++++.++||||++               ++++
T Consensus        52 ~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~  125 (352)
T 2jii_A           52 RDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGF  125 (352)
T ss_dssp             EETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEE
T ss_pred             CCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhc
Confidence            34678899998877        5899999998744      25788999999999999887               5677


Q ss_pred             Eec-CCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeE
Q psy2674          60 CRD-GDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL  138 (183)
Q Consensus        60 ~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil  138 (183)
                      +.. ++..+++|||+ +++|.+++.....             ..+++..++.++.|++.||.|||+++++||||||+||+
T Consensus       126 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-------------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl  191 (352)
T 2jii_A          126 GVHQDKYRFLVLPSL-GRSLQSALDVSPK-------------HVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF  191 (352)
T ss_dssp             EEETTTEEEEEEECC-CEEHHHHHHHSGG-------------GCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred             cccCCcEEEEEecCC-CcCHHHHHHhCCc-------------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence            765 67789999999 7999999987521             25899999999999999999999999999999999999


Q ss_pred             eccCC--ceEEecccCCCCCCcc------------cccceeeeeecccCCCcccc
Q psy2674         139 ISSDL--SVKISLSGLSKDTYQK------------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       139 ~~~~~--~~ki~dfg~a~~~~~~------------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++.++  .++|+|||++......            ...+++.|+|||++.+..++
T Consensus       192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  246 (352)
T 2jii_A          192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPS  246 (352)
T ss_dssp             EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCC
T ss_pred             EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCC
Confidence            99888  9999999999755432            23678899999999886653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.95  E-value=2.8e-28  Score=180.21  Aligned_cols=160  Identities=18%  Similarity=0.159  Sum_probs=132.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEE-ecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++......   +.+.+|+.+++.++|++++..+..+ ...+..++++||+ +++|.+
T Consensus        18 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~   93 (296)
T 3uzp_A           18 GSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLED   93 (296)
T ss_dssp             EEETTEEEEEEEETTTTEEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHH
Confidence            3346788999999999999999998744332   2578899999999887766655554 5667789999999 799999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe---ccCCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~---~~~~~~ki~dfg~a~~~~  157 (183)
                      ++.....              .+++..++.++.|++.|+.|||+++++|+||||+||++   +.++.++|+|||++....
T Consensus        94 ~~~~~~~--------------~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           94 LFNFCSR--------------KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             HHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             HHHhhcc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence            9975432              58999999999999999999999999999999999999   488999999999987543


Q ss_pred             c------------ccccceeeeeecccCCCcccc
Q psy2674         158 Q------------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~------------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .            ....++..|+|||++.+..++
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  193 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQS  193 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCC
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCC
Confidence            3            234678899999999887653

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.95  E-value=2.8e-29  Score=187.09  Aligned_cols=162  Identities=15%  Similarity=0.144  Sum_probs=131.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH-----HHHHHHHHHHHHHhcC----CCcceeeEEeEEecCCccEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD-----EALHEFKREIDLFCKL----DHAHVVKMIGICRDGDPHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l----~h~~i~~~~~~~~~~~~~~lv~e~   72 (183)
                      |.-.++.||++.+..+++.||+|++......     .....+.+|+..+..+    +|+||+++++++.+++..++++|+
T Consensus        40 g~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~  119 (312)
T 2iwi_A           40 GKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLER  119 (312)
T ss_dssp             EEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEEC
T ss_pred             EcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEe
Confidence            3446788999999999999999999744321     1223456789988888    899999999999999999999999


Q ss_pred             -CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-cCCceEEecc
Q psy2674          73 -TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSVKISLS  150 (183)
Q Consensus        73 -~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-~~~~~ki~df  150 (183)
                       +.+++|.+++....               .+++..++.++.|++.||.|||+++++|+||+|+||+++ .++.++|+||
T Consensus       120 ~~~~~~L~~~l~~~~---------------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~df  184 (312)
T 2iwi_A          120 PLPAQDLFDYITEKG---------------PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDF  184 (312)
T ss_dssp             CSSEEEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred             cCCCCCHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEc
Confidence             78899999998764               489999999999999999999999999999999999998 8899999999


Q ss_pred             cCCCCCCcc---cccceeeeeecccCCCccc
Q psy2674         151 GLSKDTYQK---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       151 g~a~~~~~~---~~~~~~~~~~pe~~~~~~~  178 (183)
                      |++......   ...++..|+|||++.+..+
T Consensus       185 g~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  215 (312)
T 2iwi_A          185 GSGALLHDEPYTDFDGTRVYSPPEWISRHQY  215 (312)
T ss_dssp             SSCEECCSSCBCCCCSCTTTSCHHHHHHSCB
T ss_pred             chhhhcccCcccccCCcccccCceeeecCCC
Confidence            998865443   4567889999999876544

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.95  E-value=1.6e-28  Score=183.90  Aligned_cols=164  Identities=20%  Similarity=0.309  Sum_probs=132.2

Q ss_pred             CCCCCceeeeccCC-CCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcC---CCcceeeEEeEEe-----cCCccEEEEe
Q psy2674           2 SLIPNARGLKASDP-QDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKL---DHAHVVKMIGICR-----DGDPHYLLLE   71 (183)
Q Consensus         2 ~~~~~~~~~~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~-----~~~~~~lv~e   71 (183)
                      |.-.++.||++.+. .+++.||+|++.... .......+.+|+.+++.+   +||||+++++++.     .....++++|
T Consensus        20 g~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e   99 (326)
T 1blx_A           20 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE   99 (326)
T ss_dssp             EEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEE
T ss_pred             cccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEe
Confidence            34467889999885 678999999986322 111122455677766655   8999999999987     4567899999


Q ss_pred             eCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEeccc
Q psy2674          72 YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG  151 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg  151 (183)
                      |++ ++|.+++.....             ..+++..++.++.|++.||.+||++|++|+||+|+||+++.++.++|+|||
T Consensus       100 ~~~-~~L~~~l~~~~~-------------~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg  165 (326)
T 1blx_A          100 HVD-QDLTTYLDKVPE-------------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG  165 (326)
T ss_dssp             CCS-CBHHHHHHHSCT-------------TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             cCC-CCHHHHHHhccc-------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCc
Confidence            998 799999976532             248899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcc----cccceeeeeecccCCCcccc
Q psy2674         152 LSKDTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       152 ~a~~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++......    ...++..|+|||++.+..++
T Consensus       166 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  197 (326)
T 1blx_A          166 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYA  197 (326)
T ss_dssp             SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCC
T ss_pred             ccccccCCCCccccccccceeCHHHHhcCCCC
Confidence            99865533    35668899999998876653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.95  E-value=2.3e-28  Score=179.48  Aligned_cols=159  Identities=24%  Similarity=0.295  Sum_probs=130.9

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHHH
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL   82 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   82 (183)
                      .-.++.||++... ++..||+|.+......  .+.+.+|+++++.++||||+++++++. ++..++++||+++++|.+++
T Consensus        23 ~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l   98 (279)
T 1qpc_A           23 AGQFGEVWMGYYN-GHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFL   98 (279)
T ss_dssp             EETTEEEEEEEET-TTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHT
T ss_pred             CCCCeEEEEEEEc-CCcEEEEEEecCCccc--HHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHH
Confidence            3456788888754 5678999998744322  347889999999999999999999986 45689999999999999998


Q ss_pred             HhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc--
Q psy2674          83 LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE--  160 (183)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~--  160 (183)
                      .....             ..+++..++.++.|++.|+.+||+++++|+||+|+||+++.++.++|+|||++.......  
T Consensus        99 ~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T 1qpc_A           99 KTPSG-------------IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT  165 (279)
T ss_dssp             TSHHH-------------HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred             hcCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence            65421             148899999999999999999999999999999999999999999999999998654432  


Q ss_pred             ----ccceeeeeecccCCCccc
Q psy2674         161 ----YYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       161 ----~~~~~~~~~pe~~~~~~~  178 (183)
                          ..++..|+|||++.+..+
T Consensus       166 ~~~~~~~~~~y~aPE~~~~~~~  187 (279)
T 1qpc_A          166 AREGAKFPIKWTAPEAINYGTF  187 (279)
T ss_dssp             CCTTCCCCTTTSCHHHHHHCEE
T ss_pred             cccCCCCccCccChhhhccCCC
Confidence                233567999999876554

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.95  E-value=4.1e-29  Score=187.14  Aligned_cols=163  Identities=17%  Similarity=0.156  Sum_probs=137.7

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCH-----HHHHHHHHHHHHHhcCC--CcceeeEEeEEecCCccEEEEeeC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDD-----EALHEFKREIDLFCKLD--HAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      +|.-.++.||++.+..+++.||+|.+......     ...+.+.+|+.+++.++  |+||+++++++.+++..++++|++
T Consensus        51 lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~  130 (320)
T 3a99_A           51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP  130 (320)
T ss_dssp             CSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECC
T ss_pred             EeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcC
Confidence            35667889999999999999999998743211     11235678999999995  699999999999999999999999


Q ss_pred             CC-CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-cCCceEEeccc
Q psy2674          74 DW-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSVKISLSG  151 (183)
Q Consensus        74 ~~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-~~~~~ki~dfg  151 (183)
                      .+ ++|.+++....               .+++..++.++.|++.||.|||+++++|+||+|+||+++ .++.+||+|||
T Consensus       131 ~~~~~L~~~l~~~~---------------~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg  195 (320)
T 3a99_A          131 EPVQDLFDFITERG---------------ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG  195 (320)
T ss_dssp             SSEEEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred             CCCccHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence            76 89999998754               488999999999999999999999999999999999998 78999999999


Q ss_pred             CCCCCCcc---cccceeeeeecccCCCccc
Q psy2674         152 LSKDTYQK---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       152 ~a~~~~~~---~~~~~~~~~~pe~~~~~~~  178 (183)
                      ++......   ...+++.|+|||++.+..+
T Consensus       196 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  225 (320)
T 3a99_A          196 SGALLKDTVYTDFDGTRVYSPPEWIRYHRY  225 (320)
T ss_dssp             TCEECCSSCBCCCCSCGGGSCHHHHHHSCB
T ss_pred             cccccccccccCCCCCccCCChHHhccCCC
Confidence            99865443   3567899999999876554

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.95  E-value=3e-28  Score=183.56  Aligned_cols=152  Identities=15%  Similarity=0.262  Sum_probs=128.9

Q ss_pred             CCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhc--CCCcceeeEEeEEecCC----ccEEEEeeCCCC
Q psy2674           3 LIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCK--LDHAHVVKMIGICRDGD----PHYLLLEYTDWG   76 (183)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~   76 (183)
                      .-.++.||++..  +++.||+|++....    ...+.+|.++++.  ++||||+++++++..++    ..++++||++++
T Consensus        52 ~G~~g~Vy~~~~--~~~~vavK~~~~~~----~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g  125 (342)
T 1b6c_B           52 KGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHG  125 (342)
T ss_dssp             EETTEEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTC
T ss_pred             CCCCcEEEEEEE--cCccEEEEEeCchh----HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCC
Confidence            345678888876  58999999986432    2356788888877  68999999999998775    789999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCceecccccceeEeccCCceEEe
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS--------DKRLIHKDIAARNCLISSDLSVKIS  148 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh--------~~~ivH~di~~~nil~~~~~~~ki~  148 (183)
                      +|.+++...                .+++..++.++.|++.|+.+||        +.+++|+||||+||+++.++.++|+
T Consensus       126 ~L~~~l~~~----------------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~  189 (342)
T 1b6c_B          126 SLFDYLNRY----------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA  189 (342)
T ss_dssp             BHHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC
T ss_pred             cHHHHHhcc----------------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE
Confidence            999999654                4889999999999999999999        8999999999999999999999999


Q ss_pred             cccCCCCCCc---------ccccceeeeeecccCCCc
Q psy2674         149 LSGLSKDTYQ---------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       149 dfg~a~~~~~---------~~~~~~~~~~~pe~~~~~  176 (183)
                      |||++.....         ....+++.|+|||++.+.
T Consensus       190 Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  226 (342)
T 1b6c_B          190 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS  226 (342)
T ss_dssp             CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSC
T ss_pred             ECCCceeccccccccccccccCCcCcccCCHhhhccc
Confidence            9999864332         234678999999998775

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.95  E-value=6.8e-28  Score=189.40  Aligned_cols=159  Identities=16%  Similarity=0.127  Sum_probs=133.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCC-cceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++.......   .+.+|+++++.++| +++..+..++...+..+++|||+ +++|.+
T Consensus        16 G~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~---~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~   91 (483)
T 3sv0_A           16 GSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP---QLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLED   91 (483)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEETTCSSC---CHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHH
T ss_pred             eeCCCEEEEEEEECCCCcEEEEEEeccccccH---HHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHH
Confidence            45678899999999999999999987443322   57889999999965 56666667777788889999999 799999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe---ccCCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---SSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~---~~~~~~ki~dfg~a~~~~  157 (183)
                      ++.....              .+++..++.++.||+.||.|||+++|+||||||+|||+   +..+.+||+|||++....
T Consensus        92 ll~~~~~--------------~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~  157 (483)
T 3sv0_A           92 LFNFCSR--------------KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR  157 (483)
T ss_dssp             HHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred             HHHhhcC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence            9976433              58999999999999999999999999999999999999   688999999999997543


Q ss_pred             cc------------cccceeeeeecccCCCccc
Q psy2674         158 QK------------EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       158 ~~------------~~~~~~~~~~pe~~~~~~~  178 (183)
                      ..            ...++..|+|||++.+..+
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~  190 (483)
T 3sv0_A          158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQ  190 (483)
T ss_dssp             CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCC
T ss_pred             CCccccccccccccccCCCccccCHHHhcCCCC
Confidence            32            4567889999999988766

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.95  E-value=4.2e-28  Score=182.81  Aligned_cols=159  Identities=15%  Similarity=0.224  Sum_probs=114.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec----CCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD----GDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~~   77 (183)
                      |.-.+|.||++.+..+++.||+|++...  ...   ..+....++.++|+||+++++++..    ....+++|||+++++
T Consensus        38 G~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~---~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~  112 (336)
T 3fhr_A           38 GLGVNGKVLECFHRRTGQKCALKLLYDS--PKA---RQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGE  112 (336)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEESS--HHH---HHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEE
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEecCc--HHH---HHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCC
Confidence            4456789999999999999999998643  221   2222334566799999999999876    345899999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---CCceEEecccCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLSK  154 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---~~~~ki~dfg~a~  154 (183)
                      |.+++.....             ..+++..++.++.|++.|+.|||+++++|+||||+||+++.   ++.++|+|||++.
T Consensus       113 L~~~l~~~~~-------------~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~  179 (336)
T 3fhr_A          113 LFSRIQERGD-------------QAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK  179 (336)
T ss_dssp             HHHHHHTC-C-------------CCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             HHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence            9999986532             25899999999999999999999999999999999999975   4569999999997


Q ss_pred             CCCcc---cccceeeeeecccCCCccc
Q psy2674         155 DTYQK---EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       155 ~~~~~---~~~~~~~~~~pe~~~~~~~  178 (183)
                      .....   ...+++.|+|||++.+..|
T Consensus       180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~  206 (336)
T 3fhr_A          180 ETTQNALQTPCYTPYYVAPEVLGPEKY  206 (336)
T ss_dssp             EC----------------------CHH
T ss_pred             eccccccccCCCCcCccChhhhCCCCC
Confidence            55432   4566899999999977655

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.95  E-value=1.3e-28  Score=185.14  Aligned_cols=152  Identities=21%  Similarity=0.222  Sum_probs=121.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHH--HHHHhcCCCcceeeEEeEEec-----CCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKRE--IDLFCKLDHAHVVKMIGICRD-----GDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E--~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~~   74 (183)
                      |.-.++.||++..  +++.||+|++.....    ..+..|  +..+..++|+||+++++.+..     ...++++|||++
T Consensus        22 g~G~~g~Vy~~~~--~~~~vavK~~~~~~~----~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~   95 (336)
T 3g2f_A           22 GRGRYGAVYKGSL--DERPVAVKVFSFANR----QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYP   95 (336)
T ss_dssp             EECSSEEEEEEEE--TTEEEEEEEEEGGGH----HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCT
T ss_pred             ccCCCeEEEEEEE--CCeEEEEEEeeccch----hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEecCC
Confidence            4456788888854  789999999864322    233334  444455799999999986542     235689999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CceecccccceeEeccCCce
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK---------RLIHKDIAARNCLISSDLSV  145 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---------~ivH~di~~~nil~~~~~~~  145 (183)
                      +++|.+++...                ..++..++.++.|++.||.|||+.         +++||||||+||+++.++.+
T Consensus        96 ~g~L~~~l~~~----------------~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~  159 (336)
T 3g2f_A           96 NGSLXKYLSLH----------------TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC  159 (336)
T ss_dssp             TCBHHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred             CCcHHHHHhhc----------------ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence            99999999665                357888999999999999999999         99999999999999999999


Q ss_pred             EEecccCCCCCCcc-------------cccceeeeeecccCCC
Q psy2674         146 KISLSGLSKDTYQK-------------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       146 ki~dfg~a~~~~~~-------------~~~~~~~~~~pe~~~~  175 (183)
                      ||+|||++......             ...+|..|+|||++.+
T Consensus       160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  202 (336)
T 3g2f_A          160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG  202 (336)
T ss_dssp             EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTT
T ss_pred             EEeeccceeecccccccCccccccccccCCCccceeCchhhcC
Confidence            99999999754321             3457899999999987

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.95  E-value=7.1e-28  Score=182.73  Aligned_cols=162  Identities=13%  Similarity=0.143  Sum_probs=124.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc-------cEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP-------HYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~-------~~lv~e~~~   74 (183)
                      |.-.+|.||++.+..+++.||+|++......  .....+|++.++.++||||+++++++...+.       .+++|||++
T Consensus        32 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~  109 (360)
T 3e3p_A           32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP  109 (360)
T ss_dssp             -------CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCS
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeeccc
Confidence            5567788999999999999999988643221  2245677888888999999999999975333       789999998


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCceecccccceeEecc-CCceEEeccc
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS--DKRLIHKDIAARNCLISS-DLSVKISLSG  151 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh--~~~ivH~di~~~nil~~~-~~~~ki~dfg  151 (183)
                       ++|...+.....           ....+++..++.++.|++.|+.+||  +++++||||||+||+++. ++.+||+|||
T Consensus       110 -~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg  177 (360)
T 3e3p_A          110 -DTLHRCCRNYYR-----------RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFG  177 (360)
T ss_dssp             -CBHHHHHHHHHT-----------TTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCT
T ss_pred             -ccHHHHHHHHhh-----------cccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCC
Confidence             566665544221           1125788999999999999999999  999999999999999986 8999999999


Q ss_pred             CCCCCCcc----cccceeeeeecccCCCcc
Q psy2674         152 LSKDTYQK----EYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       152 ~a~~~~~~----~~~~~~~~~~pe~~~~~~  177 (183)
                      ++......    ...++++|+|||++.+..
T Consensus       178 ~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~  207 (360)
T 3e3p_A          178 SAKKLSPSEPNVAYICSRYYRAPELIFGNQ  207 (360)
T ss_dssp             TCBCCCTTSCCCSTTSCGGGCCHHHHTTCS
T ss_pred             CceecCCCCCcccccCCcceeCHHHHcCCC
Confidence            99865443    456789999999986643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.95  E-value=4.6e-28  Score=186.22  Aligned_cols=157  Identities=18%  Similarity=0.169  Sum_probs=123.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc------cEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP------HYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~------~~lv~e~~~~   75 (183)
                      |.-.+|.||++.+..++. +|+|++.....     ...+|+++++.++||||+++++++...+.      .+++|||++ 
T Consensus        49 G~G~~g~V~~a~~~~~~~-~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~-  121 (394)
T 4e7w_A           49 GNGSFGVVFQAKLVESDE-VAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP-  121 (394)
T ss_dssp             EEETTEEEEEEEETTTEE-EEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCS-
T ss_pred             eeCCCeEEEEEEECCCCe-EEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccC-
Confidence            445678899998877776 77777653321     22469999999999999999999965332      789999998 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec-cCCceEEecccCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS-SDLSVKISLSGLSK  154 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~-~~~~~ki~dfg~a~  154 (183)
                      +++.+.+.....           ....+++..++.++.|++.||.|||++|++||||||+||+++ .++.+||+|||+|+
T Consensus       122 ~~l~~~~~~~~~-----------~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~  190 (394)
T 4e7w_A          122 ETVYRASRHYAK-----------LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK  190 (394)
T ss_dssp             EEHHHHHHHHHH-----------TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred             ccHHHHHHHHHh-----------hcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence            455544443211           012588999999999999999999999999999999999998 79999999999997


Q ss_pred             CCCc----ccccceeeeeecccCCCc
Q psy2674         155 DTYQ----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       155 ~~~~----~~~~~~~~~~~pe~~~~~  176 (183)
                      ....    ....++++|+|||++.+.
T Consensus       191 ~~~~~~~~~~~~~t~~y~aPE~~~~~  216 (394)
T 4e7w_A          191 ILIAGEPNVSYICSRYYRAPELIFGA  216 (394)
T ss_dssp             ECCTTCCCCSSCSCGGGCCHHHHTTC
T ss_pred             cccCCCCCcccccCcCccCHHHHcCC
Confidence            5432    246779999999998764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.95  E-value=1.9e-27  Score=182.12  Aligned_cols=162  Identities=20%  Similarity=0.199  Sum_probs=135.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-Cc-----ceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HA-----HVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~-----~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |.-.++.||++.+..+++.||+|++...  ......+.+|+.+++.++ |+     +++++.+.+..++..+++||+++ 
T Consensus        63 G~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-  139 (382)
T 2vx3_A           63 GKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLS-  139 (382)
T ss_dssp             EEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCC-
T ss_pred             eecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCC-
Confidence            3446789999999999999999998743  344556778888888773 54     49999999999999999999997 


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCceecccccceeEec--cCCceEEeccc
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS--DKRLIHKDIAARNCLIS--SDLSVKISLSG  151 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh--~~~ivH~di~~~nil~~--~~~~~ki~dfg  151 (183)
                      ++|.+++.....             ..+++..++.++.|++.|+.|||  +.||+||||||+|||++  .++.+||+|||
T Consensus       140 ~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG  206 (382)
T 2vx3_A          140 YNLYDLLRNTNF-------------RGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG  206 (382)
T ss_dssp             CBHHHHHHHTTT-------------SCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred             CCHHHHHhhcCc-------------CCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence            699999987532             24889999999999999999999  57999999999999994  57889999999


Q ss_pred             CCCCCCc--ccccceeeeeecccCCCcccc
Q psy2674         152 LSKDTYQ--KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       152 ~a~~~~~--~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++.....  ....+|++|+|||++.+.+|+
T Consensus       207 ~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~  236 (382)
T 2vx3_A          207 SSCQLGQRIYQYIQSRFYRSPEVLLGMPYD  236 (382)
T ss_dssp             TCEETTCCCCSSCSCGGGCCHHHHTTCCCC
T ss_pred             CceecccccccccCCccccChHHHcCCCCC
Confidence            9986543  356789999999999887764

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.95  E-value=1.8e-27  Score=179.81  Aligned_cols=162  Identities=15%  Similarity=0.133  Sum_probs=134.1

Q ss_pred             CCCCCceeeeccCCCCc-ceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcc------eeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDT-SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAH------VVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~------i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-.++.||++.+..++ ..||+|++...  ....+.+.+|+.+++.++|++      ++.+.+++...+..+++|||++
T Consensus        28 g~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  105 (355)
T 2eu9_A           28 GEGTFGKVVECLDHARGKSQVALKIIRNV--GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLG  105 (355)
T ss_dssp             EEETTEEEEEEEETTTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECCC
T ss_pred             eccCCeEEEEEEecCCCceEEEEEEEccc--ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEeccC
Confidence            34467889999887776 79999998643  344567888999999887655      8999999999999999999995


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEe---------------
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI---------------  139 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~---------------  139 (183)
                       ++|.+.+.....             ..+++..++.++.|++.||.|||+++++|+||||+||++               
T Consensus       106 -~~l~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~  171 (355)
T 2eu9_A          106 -KNTFEFLKENNF-------------QPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC  171 (355)
T ss_dssp             -CBHHHHHHHTTT-------------CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred             -CChHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccc
Confidence             777777765432             258899999999999999999999999999999999999               


Q ss_pred             ----ccCCceEEecccCCCCCCc--ccccceeeeeecccCCCcccc
Q psy2674         140 ----SSDLSVKISLSGLSKDTYQ--KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       140 ----~~~~~~ki~dfg~a~~~~~--~~~~~~~~~~~pe~~~~~~~~  179 (183)
                          +.++.++|+|||++.....  ....+|+.|+|||++.+..++
T Consensus       172 ~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  217 (355)
T 2eu9_A          172 EEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWA  217 (355)
T ss_dssp             CEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCC
T ss_pred             cccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCC
Confidence                5678999999999985443  345779999999999876654

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.95  E-value=2.9e-27  Score=176.34  Aligned_cols=156  Identities=14%  Similarity=0.198  Sum_probs=130.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCC--CcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLD--HAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.++.||++.+. +++.||+|++.. ..+....+.+.+|+.+++.++  |+||+++++++.+++..+++|| +.+++|
T Consensus        37 g~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L  114 (313)
T 3cek_A           37 GSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDL  114 (313)
T ss_dssp             ECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEH
T ss_pred             cCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcH
Confidence            45577889999885 488999999974 345566778999999999996  6999999999999999999999 556999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.||.|||+++++|+||+|+||+++ ++.+||+|||++.....
T Consensus       115 ~~~l~~~~---------------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~  178 (313)
T 3cek_A          115 NSWLKKKK---------------SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP  178 (313)
T ss_dssp             HHHHHHCS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---
T ss_pred             HHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccccC
Confidence            99998653               488999999999999999999999999999999999996 48999999999986543


Q ss_pred             c-------cccceeeeeecccCCC
Q psy2674         159 K-------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 ~-------~~~~~~~~~~pe~~~~  175 (183)
                      .       ...+++.|+|||++.+
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~  202 (313)
T 3cek_A          179 DTTSVVKDSQVGTVNYMPPEAIKD  202 (313)
T ss_dssp             -----------CCGGGCCHHHHTT
T ss_pred             ccccccccCCCCCCCcCCHHHHhh
Confidence            2       3457899999999876

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.95  E-value=2.6e-27  Score=176.68  Aligned_cols=158  Identities=13%  Similarity=0.111  Sum_probs=121.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHH-HHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHE-FKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++.+..+++.||+|++..........+ +.++..+++.++||||+++++++.+++..+++|||++ +.+..
T Consensus        34 g~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~~~  112 (318)
T 2dyl_A           34 GSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMG-TCAEK  112 (318)
T ss_dssp             ------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCS-EEHHH
T ss_pred             eecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEeccC-CcHHH
Confidence            455678899999999999999999986555443334 4455556778899999999999999999999999994 66666


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +......              .+++..++.++.|++.|+.|||++ +++|+||+|+||+++.++.++|+|||++......
T Consensus       113 l~~~~~~--------------~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~  178 (318)
T 2dyl_A          113 LKKRMQG--------------PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD  178 (318)
T ss_dssp             HHHHHTS--------------CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred             HHHHhcc--------------CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence            6654322              588999999999999999999995 9999999999999999999999999999754432


Q ss_pred             ----cccceeeeeecccCC
Q psy2674         160 ----EYYKYRWVICSNIAE  174 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~  174 (183)
                          ...+++.|+|||++.
T Consensus       179 ~~~~~~~~~~~y~aPE~~~  197 (318)
T 2dyl_A          179 KAKDRSAGCAAYMAPERID  197 (318)
T ss_dssp             --------CCTTCCHHHHC
T ss_pred             ccccccCCCccccChhhcc
Confidence                346788999999985

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.95  E-value=6e-28  Score=183.83  Aligned_cols=162  Identities=17%  Similarity=0.177  Sum_probs=135.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-----------CcceeeEEeEEecCC----cc
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-----------HAHVVKMIGICRDGD----PH   66 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~~i~~~~~~~~~~~----~~   66 (183)
                      |.-.++.||++.+..+++.||+|++..  +....+.+.+|+.+++.++           |+||+++++++...+    ..
T Consensus        28 g~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  105 (373)
T 1q8y_A           28 GWGHFSTVWLAKDMVNNTHVAMKIVRG--DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHV  105 (373)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEE
T ss_pred             eecCCeEEEEEEecCCCcEEEEEEecC--CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceE
Confidence            445678999999999999999999863  3344567889999998875           789999999987644    68


Q ss_pred             EEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CceecccccceeEec-----
Q psy2674          67 YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-RLIHKDIAARNCLIS-----  140 (183)
Q Consensus        67 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~-~ivH~di~~~nil~~-----  140 (183)
                      ++++|++ +++|.+++.....             ..+++..++.++.|++.||.|||++ |++||||||+||+++     
T Consensus       106 ~lv~e~~-~~~L~~~~~~~~~-------------~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A          106 VMVFEVL-GENLLALIKKYEH-------------RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EEEECCC-CEEHHHHHHHTTT-------------SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETT
T ss_pred             EEEEecC-CCCHHHHHHHhhc-------------cCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCC
Confidence            8999999 6999999987532             2488999999999999999999998 999999999999994     


Q ss_pred             -cCCceEEecccCCCCCCc--ccccceeeeeecccCCCcccc
Q psy2674         141 -SDLSVKISLSGLSKDTYQ--KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       141 -~~~~~ki~dfg~a~~~~~--~~~~~~~~~~~pe~~~~~~~~  179 (183)
                       ..+.++|+|||++.....  ....+|+.|+|||++.+.+++
T Consensus       172 ~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~  213 (373)
T 1q8y_A          172 ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWG  213 (373)
T ss_dssp             TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCC
T ss_pred             cCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCC
Confidence             344899999999975543  345779999999999887653

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.94  E-value=1.8e-27  Score=184.85  Aligned_cols=152  Identities=18%  Similarity=0.220  Sum_probs=119.8

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHHHH
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL   82 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   82 (183)
                      -.+|.|+ .....+++.||+|.+.....    ..+.+|+++++.+ +||||+++++++.+....+++||+++ ++|.+++
T Consensus        35 G~~G~V~-~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l  108 (432)
T 3p23_A           35 GAEGTIV-YRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYV  108 (432)
T ss_dssp             CGGGCEE-EEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHH
T ss_pred             CcCEEEE-EEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHH
Confidence            3455543 23446789999999864322    1356799999999 89999999999999999999999998 7999999


Q ss_pred             HhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-----CCceEEecccCCCCCC
Q psy2674          83 LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----DLSVKISLSGLSKDTY  157 (183)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-----~~~~ki~dfg~a~~~~  157 (183)
                      .....              ...+..++.++.|++.||.|||+++++||||||+||+++.     ...++|+|||+|....
T Consensus       109 ~~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~  174 (432)
T 3p23_A          109 EQKDF--------------AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA  174 (432)
T ss_dssp             HSSSC--------------CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred             HhcCC--------------CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence            76532              2444566789999999999999999999999999999942     3457899999997554


Q ss_pred             c--------ccccceeeeeecccCCC
Q psy2674         158 Q--------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       158 ~--------~~~~~~~~~~~pe~~~~  175 (183)
                      .        ....+|++|+|||++.+
T Consensus       175 ~~~~~~~~~~~~~gt~~y~APE~l~~  200 (432)
T 3p23_A          175 VGRHSFSRRSGVPGTEGWIAPEMLSE  200 (432)
T ss_dssp             -----------CCSCTTSCCGGGTSC
T ss_pred             CCCcceeeccccCCCcCccChhhhhc
Confidence            2        23567999999999975

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.94  E-value=2.9e-26  Score=169.25  Aligned_cols=137  Identities=13%  Similarity=0.102  Sum_probs=120.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.++.||++.+..+++.||+|++....  +....+.+.+|+..++.++|+||+++++++.+++..+++|||+++++|.
T Consensus        40 g~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~  119 (286)
T 3uqc_A           40 GGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQ  119 (286)
T ss_dssp             EBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHH
T ss_pred             cccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHH
Confidence            45567899999999999999999997443  3556678999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      +++...                 .....+..++.|++.||.|||++|++||||||+||+++.++.++|++++....
T Consensus       120 ~~l~~~-----------------~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~  178 (286)
T 3uqc_A          120 EVADTS-----------------PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPD  178 (286)
T ss_dssp             HHHTTC-----------------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTT
T ss_pred             HHHhcC-----------------CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCC
Confidence            998432                 34556888999999999999999999999999999999999999998876653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.94  E-value=3.3e-28  Score=181.66  Aligned_cols=156  Identities=15%  Similarity=0.197  Sum_probs=126.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.++.||++....   .+|+|.+... ......+.+.+|+.+++.++|+||+++++++.+++..++++||+++++|.+
T Consensus        42 g~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~  118 (319)
T 2y4i_B           42 GKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYS  118 (319)
T ss_dssp             CCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHH
T ss_pred             ccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHH
Confidence            556678889886643   5899998733 222233467789999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      ++.....              .+++..++.++.|++.|+.+||+++++|+||+|+||+++ ++.++|+|||++.....  
T Consensus       119 ~l~~~~~--------------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~  183 (319)
T 2y4i_B          119 VVRDAKI--------------VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQ  183 (319)
T ss_dssp             HTTSSCC--------------CCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC------
T ss_pred             HHHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccccc
Confidence            9865432              588899999999999999999999999999999999997 67999999999764321  


Q ss_pred             --------ccccceeeeeecccCCC
Q psy2674         159 --------KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       159 --------~~~~~~~~~~~pe~~~~  175 (183)
                              ....++..|+|||++.+
T Consensus       184 ~~~~~~~~~~~~g~~~y~aPE~~~~  208 (319)
T 2y4i_B          184 AGRREDKLRIQNGWLCHLAPEIIRQ  208 (319)
T ss_dssp             ----CCSCBCCSGGGGTSCHHHHSC
T ss_pred             ccccccccccCCCcccccChHHhhh
Confidence                    12346788999999875

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.94  E-value=3.6e-27  Score=183.33  Aligned_cols=160  Identities=18%  Similarity=0.208  Sum_probs=119.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.+|.|+.+ ...+|+.||+|.+....    .+.+.+|+.+++.+ +||||+++++++.+++..++++||++ ++|.+
T Consensus        24 G~G~~g~V~~~-~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~   97 (434)
T 2rio_A           24 GYGSSGTVVFQ-GSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQD   97 (434)
T ss_dssp             EECSTTCEEEE-EESSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHH
T ss_pred             eeCCCeEEEEE-EEECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHH
Confidence            33456667543 34579999999986431    23578899999876 89999999999999999999999997 79999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC-------------CceEE
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-------------LSVKI  147 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~-------------~~~ki  147 (183)
                      ++........        ......+..++.++.|++.||.|||+++++||||||+||+++..             ..++|
T Consensus        98 ~l~~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL  169 (434)
T 2rio_A           98 LVESKNVSDE--------NLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILI  169 (434)
T ss_dssp             HHHTC--------------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEE
T ss_pred             HHhccCCCch--------hhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEE
Confidence            9976532100        00012334567899999999999999999999999999999654             48999


Q ss_pred             ecccCCCCCCcc---------cccceeeeeecccCCC
Q psy2674         148 SLSGLSKDTYQK---------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       148 ~dfg~a~~~~~~---------~~~~~~~~~~pe~~~~  175 (183)
                      +|||++......         ...+|++|+|||++.+
T Consensus       170 ~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  206 (434)
T 2rio_A          170 SDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEE  206 (434)
T ss_dssp             CCCTTCEECCC--------------CCTTSCHHHHSC
T ss_pred             cccccceecCCCCccceeeecCCCCCCCccCHHHhcc
Confidence            999999865432         3467899999999876

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.93  E-value=1.5e-25  Score=166.15  Aligned_cols=138  Identities=17%  Similarity=0.290  Sum_probs=119.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHH-hcCCCcceeeEEeEEec----CCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLF-CKLDHAHVVKMIGICRD----GDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~   76 (183)
                      |.-.++.||++.+..+++.||+|++...      ..+.+|+..+ +..+||||+++++++.+    ....+++|||++++
T Consensus        27 g~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~  100 (299)
T 3m2w_A           27 GLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG  100 (299)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSC
T ss_pred             ccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCC
Confidence            4456788999999999999999998632      2567788887 55699999999999876    66789999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---CCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---~~~~ki~dfg~a  153 (183)
                      +|.+++.....             ..+++..++.++.|++.|+.|||+++++|+||||+||+++.   ++.++|+|||++
T Consensus       101 ~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a  167 (299)
T 3m2w_A          101 ELFSRIQDRGD-------------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA  167 (299)
T ss_dssp             BHHHHHHHCTT-------------CCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred             cHHHHHHhccC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence            99999987532             25899999999999999999999999999999999999987   789999999999


Q ss_pred             CCCCc
Q psy2674         154 KDTYQ  158 (183)
Q Consensus       154 ~~~~~  158 (183)
                      .....
T Consensus       168 ~~~~~  172 (299)
T 3m2w_A          168 KETTG  172 (299)
T ss_dssp             EECTT
T ss_pred             ccccc
Confidence            86554

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.93  E-value=7.5e-27  Score=185.78  Aligned_cols=147  Identities=15%  Similarity=0.108  Sum_probs=119.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CH-----HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DD-----EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~-----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-.++.||++  ...+..+++|......  ..     ...+++.+|+++++.++||||+++..++.+++..+++|||++
T Consensus       345 G~G~fg~Vy~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~  422 (540)
T 3en9_A          345 GKGAEADIKRD--SYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYIN  422 (540)
T ss_dssp             ---CCEEEEEE--ECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCC
T ss_pred             eeCCCEEEEEE--EECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCC
Confidence            45567889988  4567888888865322  11     124568999999999999999966555557778899999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+++..                       ...++.|++.++.|||+++++||||||+|||++.  .+||+|||+|+
T Consensus       423 ggsL~~~l~~-----------------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~  477 (540)
T 3en9_A          423 GKLAKDVIED-----------------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGK  477 (540)
T ss_dssp             SEEHHHHSTT-----------------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCE
T ss_pred             CCCHHHHHHH-----------------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCE
Confidence            9999998742                       4578999999999999999999999999999988  99999999999


Q ss_pred             CCCcc------------cccceeeeeecccCCC
Q psy2674         155 DTYQK------------EYYKYRWVICSNIAEG  175 (183)
Q Consensus       155 ~~~~~------------~~~~~~~~~~pe~~~~  175 (183)
                      .....            ...+|++|+|||++.+
T Consensus       478 ~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~  510 (540)
T 3en9_A          478 ISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWER  510 (540)
T ss_dssp             ECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHH
T ss_pred             ECCCccccccchhhhhhhhcCCCCcCCHHHHHH
Confidence            76552            4567999999999876

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.91  E-value=3.5e-25  Score=171.18  Aligned_cols=162  Identities=14%  Similarity=0.077  Sum_probs=117.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH--HHHHHHHHHHHHHhcCCC-cc---------eee------------EE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD--EALHEFKREIDLFCKLDH-AH---------VVK------------MI   57 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h-~~---------i~~------------~~   57 (183)
                      |--.+|.||++.+..+++.||+|++......  ...+.+.+|+..++.++| .+         ++.            +.
T Consensus        87 G~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (413)
T 3dzo_A           87 GQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMI  166 (413)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-----
T ss_pred             ccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccc
Confidence            3456889999999999999999998743332  235678899999999876 21         111            11


Q ss_pred             eEEec-----CCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceeccc
Q psy2674          58 GICRD-----GDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI  132 (183)
Q Consensus        58 ~~~~~-----~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di  132 (183)
                      ..+..     ....+++++.+ +++|.+++.......        .....+++..++.++.|++.||.|||+++++||||
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~--------~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          167 RVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHS--------STHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ----------CCSEEEEEECC-SEEHHHHHHHHHHHT--------TTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             cccCCCccccccceEEEeehh-cCCHHHHHHHhhccc--------ccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            11111     12346666665 499999886431100        01124677888999999999999999999999999


Q ss_pred             ccceeEeccCCceEEecccCCCCCCcc--cccceeeeeecccC
Q psy2674         133 AARNCLISSDLSVKISLSGLSKDTYQK--EYYKYRWVICSNIA  173 (183)
Q Consensus       133 ~~~nil~~~~~~~ki~dfg~a~~~~~~--~~~~~~~~~~pe~~  173 (183)
                      ||+|||++.++.+||+|||+++.....  ...+ +.|+|||++
T Consensus       238 Kp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~  279 (413)
T 3dzo_A          238 RPVDIVLDQRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETT  279 (413)
T ss_dssp             CGGGEEECTTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHH
T ss_pred             ccceEEEecCCeEEEEeccceeecCCccccCCC-CceeCchhh
Confidence            999999999999999999998865443  3456 899999998

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.89  E-value=5.6e-24  Score=156.68  Aligned_cols=127  Identities=13%  Similarity=0.107  Sum_probs=101.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH-----------------HHHHHHHHHHHHHhcCCCcceeeEEeEEecCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD-----------------EALHEFKREIDLFCKLDHAHVVKMIGICRDGD   64 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   64 (183)
                      |.-.++.||++.+ .+|+.||+|.+......                 .....+.+|+++++.++  | +++.+.+. .+
T Consensus        99 G~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~-~~  173 (282)
T 1zar_A           99 GEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA-WE  173 (282)
T ss_dssp             EECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE-EE
T ss_pred             ccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe-cc
Confidence            4456788999998 88999999998643211                 23567899999999998  4 55555543 35


Q ss_pred             ccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc
Q psy2674          65 PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS  144 (183)
Q Consensus        65 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~  144 (183)
                      ..+++|||++|++|.+ +.                   .  .....++.|++.|+.+||++|++||||||.|||++ ++.
T Consensus       174 ~~~lvmE~~~g~~L~~-l~-------------------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~  230 (282)
T 1zar_A          174 GNAVLMELIDAKELYR-VR-------------------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEG  230 (282)
T ss_dssp             TTEEEEECCCCEEGGG-CC-------------------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTE
T ss_pred             ceEEEEEecCCCcHHH-cc-------------------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCc
Confidence            6799999999999987 31                   1  12346899999999999999999999999999999 999


Q ss_pred             eEEecccCCCCC
Q psy2674         145 VKISLSGLSKDT  156 (183)
Q Consensus       145 ~ki~dfg~a~~~  156 (183)
                      ++|+|||+|+..
T Consensus       231 vkl~DFG~a~~~  242 (282)
T 1zar_A          231 IWIIDFPQSVEV  242 (282)
T ss_dssp             EEECCCTTCEET
T ss_pred             EEEEECCCCeEC
Confidence            999999999743

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.81  E-value=1.2e-20  Score=137.20  Aligned_cols=132  Identities=15%  Similarity=0.096  Sum_probs=98.8

Q ss_pred             CCCCCceeeeccCCCCcce--EEEeeccCCCCH-----------------------HHHHHHHHHHHHHhcCCCcce--e
Q psy2674           2 SLIPNARGLKASDPQDTSV--LMAKSLVHSKDD-----------------------EALHEFKREIDLFCKLDHAHV--V   54 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~--vavK~~~~~~~~-----------------------~~~~~~~~E~~~l~~l~h~~i--~   54 (183)
                      |.-.+|.||++....+|..  ||+|++......                       .....+.+|+..++.+.|+++  .
T Consensus        56 g~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p  135 (258)
T 1zth_A           56 STGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVP  135 (258)
T ss_dssp             EECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred             eecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence            4456789999988778888  999987532111                       122367889999999877653  3


Q ss_pred             eEEeEEecCCccEEEEeeCCC-C----CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCce
Q psy2674          55 KMIGICRDGDPHYLLLEYTDW-G----DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS-DKRLI  128 (183)
Q Consensus        55 ~~~~~~~~~~~~~lv~e~~~~-~----~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh-~~~iv  128 (183)
                      .+++.    +..+++|||+++ |    +|.+....                  .++.....++.|++.++.+|| +.|++
T Consensus       136 ~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------------------~~~~~~~~i~~qi~~~l~~lH~~~giv  193 (258)
T 1zth_A          136 QPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------------------LKELDVEGIFNDVVENVKRLYQEAELV  193 (258)
T ss_dssp             CEEEE----ETTEEEEECCEETTEECCBHHHHGGG------------------GGGSCHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             eEEEc----CCCEEEEEecCCCCCccccHHHHhhc------------------cChHHHHHHHHHHHHHHHHHHHHCCEE
Confidence            33432    367899999942 3    66655321                  224467788999999999999 99999


Q ss_pred             ecccccceeEeccCCceEEecccCCCCCC
Q psy2674         129 HKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus       129 H~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      ||||||.|||++.  .++|+|||+|....
T Consensus       194 HrDlkp~NILl~~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          194 HADLSEYNIMYID--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             CSSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred             eCCCCHHHEEEcC--cEEEEECcccccCC
Confidence            9999999999988  99999999998553

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.65  E-value=1.2e-16  Score=121.54  Aligned_cols=130  Identities=13%  Similarity=0.075  Sum_probs=89.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC----------------CH-HHH----HHHHHHHHHHhcCCCccee--eEEe
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK----------------DD-EAL----HEFKREIDLFCKLDHAHVV--KMIG   58 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~----------------~~-~~~----~~~~~E~~~l~~l~h~~i~--~~~~   58 (183)
                      |.-.+|.||.|.+. +|+.||+|++....                .. .++    -....|...+..+.+.++.  ..++
T Consensus       104 G~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp~p~~  182 (397)
T 4gyi_A          104 GVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVPEPIA  182 (397)
T ss_dssp             EECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCEEE
T ss_pred             eeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCCeeee
Confidence            55678999999874 69999999865210                00 111    1123466666666433322  2222


Q ss_pred             EEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeE
Q psy2674          59 ICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCL  138 (183)
Q Consensus        59 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil  138 (183)
                      .    ...+++|||++|++|.+..                     .......++.|++.+|.+||++|+|||||||.|||
T Consensus       183 ~----~~~~LVME~i~G~~L~~l~---------------------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NIL  237 (397)
T 4gyi_A          183 Q----SRHTIVMSLVDALPMRQVS---------------------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNIL  237 (397)
T ss_dssp             E----ETTEEEEECCSCEEGGGCC---------------------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEE
T ss_pred             c----cCceEEEEecCCccHhhhc---------------------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEE
Confidence            2    2347999999988775422                     11234567899999999999999999999999999


Q ss_pred             eccCC----------ceEEecccCCCCCC
Q psy2674         139 ISSDL----------SVKISLSGLSKDTY  157 (183)
Q Consensus       139 ~~~~~----------~~ki~dfg~a~~~~  157 (183)
                      ++.++          .+.|+||+.+....
T Consensus       238 l~~dgd~~d~~~~~~~~~iID~~Q~V~~~  266 (397)
T 4gyi_A          238 IREEKDAEDPSSITLTPIIIXFPQMVSMD  266 (397)
T ss_dssp             EEEEECSSCTTSEEEEEEECCCTTCEETT
T ss_pred             EeCCCCcccccccccceEEEEeCCcccCC
Confidence            97665          48999999887543

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.40  E-value=6.4e-13  Score=96.37  Aligned_cols=128  Identities=16%  Similarity=0.051  Sum_probs=94.3

Q ss_pred             CCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHH
Q psy2674           5 PNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL   83 (183)
Q Consensus         5 ~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   83 (183)
                      ..+.||++...  +..+++|........ ....+.+|+..++.+ ++..+.++++++.+.+..+++||+++|.+|.+.+.
T Consensus        26 s~~~v~~~~~~--~~~~vlK~~~~~~~~-~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~  102 (263)
T 3tm0_A           26 SPAKVYKLVGE--NENLYLKMTDSRYKG-TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE  102 (263)
T ss_dssp             SSSEEEEEECS--SCEEEEEEECGGGTT-STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC
T ss_pred             CCCeEEEEECC--CCcEEEEeCCcccCC-CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC
Confidence            34667877543  688999998642100 112578899999988 46778889999888888999999999888876521


Q ss_pred             hhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---------------------------------------
Q psy2674          84 ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD---------------------------------------  124 (183)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~---------------------------------------  124 (183)
                                          +......++.++..++..||+                                       
T Consensus       103 --------------------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (263)
T 3tm0_A          103 --------------------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT  162 (263)
T ss_dssp             --------------------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred             --------------------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence                                111223556677777788887                                       


Q ss_pred             --------------------CCceecccccceeEeccCCceEEecccCCCC
Q psy2674         125 --------------------KRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus       125 --------------------~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                                          ..++|+|++|.||+++.+..+.|+||+.+..
T Consensus       163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T 3tm0_A          163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence                                3489999999999998766678999998863

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.22  E-value=4.2e-11  Score=86.31  Aligned_cols=68  Identities=22%  Similarity=0.272  Sum_probs=49.3

Q ss_pred             ceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcc--eeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           7 ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAH--VVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         7 ~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~--i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      +.+|+... .+|..+++|......    ...+.+|+..++.+.+.+  +.+++++..+++..+++|||++|.+|.
T Consensus        34 ~~v~~~~~-~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           34 AAVFRLSA-QGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             CEEEEEEC-TTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             ceEEEEec-CCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            56776643 457789999976431    135678888888884333  556888888777889999999987774

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.19  E-value=1e-10  Score=88.54  Aligned_cols=131  Identities=16%  Similarity=0.192  Sum_probs=88.6

Q ss_pred             eeeeccCCCCcceEEEeecc--CCCCHHHHHHHHHHHHHHhcCC--CcceeeEEeEEecC---CccEEEEeeCCCCCHHH
Q psy2674           8 RGLKASDPQDTSVLMAKSLV--HSKDDEALHEFKREIDLFCKLD--HAHVVKMIGICRDG---DPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         8 ~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~---~~~~lv~e~~~~~~L~~   80 (183)
                      .+|.....  +..+++|...  ..........+.+|..+++.+.  +..+.+++.++.+.   +..+++||+++|..+.+
T Consensus        53 ~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~  130 (359)
T 3dxp_A           53 PTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWD  130 (359)
T ss_dssp             CEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCC
T ss_pred             eEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCC
Confidence            45555433  4577888765  3332223346788999999885  45578888888766   45899999999766633


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc------------------------------------
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD------------------------------------  124 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~------------------------------------  124 (183)
                      ..  .               ..++......++.++...+..||+                                    
T Consensus       131 ~~--~---------------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (359)
T 3dxp_A          131 QS--L---------------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETES  193 (359)
T ss_dssp             TT--C---------------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSC
T ss_pred             Cc--c---------------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcC
Confidence            10  0               125566666677777777777775                                    


Q ss_pred             ----------------------CCceecccccceeEeccCC--ceEEecccCCCCCC
Q psy2674         125 ----------------------KRLIHKDIAARNCLISSDL--SVKISLSGLSKDTY  157 (183)
Q Consensus       125 ----------------------~~ivH~di~~~nil~~~~~--~~ki~dfg~a~~~~  157 (183)
                                            ..++|+|+++.||+++.++  .+.|+||+.+....
T Consensus       194 ~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g~  250 (359)
T 3dxp_A          194 IPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLGH  250 (359)
T ss_dssp             CHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEEC
T ss_pred             ChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccCC
Confidence                                  3689999999999998664  36899999987443

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.92  E-value=9e-09  Score=74.69  Aligned_cols=73  Identities=16%  Similarity=0.059  Sum_probs=55.8

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHHHH
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL   82 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~   82 (183)
                      .+.+|+......+..+.+|.-...    ....+.+|...++.+ .+-.+-+++.++.+++..+++||+++|.++.+..
T Consensus        38 ~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~~~  111 (272)
T 4gkh_A           38 GATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQVL  111 (272)
T ss_dssp             SCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHHHH
T ss_pred             CCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccccc
Confidence            456787777777888999986532    234678899999888 4455777888888888999999999987776554

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.65  E-value=2.8e-07  Score=68.07  Aligned_cols=59  Identities=7%  Similarity=0.058  Sum_probs=37.7

Q ss_pred             ceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcc--eeeEEeEEecCC---ccEEEEeeCCCCCHHH
Q psy2674          19 SVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAH--VVKMIGICRDGD---PHYLLLEYTDWGDLKQ   80 (183)
Q Consensus        19 ~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~--i~~~~~~~~~~~---~~~lv~e~~~~~~L~~   80 (183)
                      ..+++|....   ......+.+|...++.+ .+..  +.+++.....++   ..|++|++++|.+|..
T Consensus        41 ~~~vlR~~~~---~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~  105 (304)
T 3sg8_A           41 RDFIFKFPKH---SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTP  105 (304)
T ss_dssp             TSEEEEEESS---HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCH
T ss_pred             CEEEEEecCC---cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCc
Confidence            4578887542   23455788999999887 3333  334444443333   3578999999877764

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.62  E-value=8e-07  Score=65.78  Aligned_cols=60  Identities=12%  Similarity=0.101  Sum_probs=41.7

Q ss_pred             cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCc---ceeeEEeEEe-cCCccEEEEeeCCCCCHHH
Q psy2674          18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHA---HVVKMIGICR-DGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus        18 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~---~i~~~~~~~~-~~~~~~lv~e~~~~~~L~~   80 (183)
                      +..+++|+-.   .......+.+|..+++.+.+.   .+.+++.+.. ..+..+++||+++|.++..
T Consensus        39 g~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~  102 (306)
T 3tdw_A           39 NGDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGE  102 (306)
T ss_dssp             TTTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHH
T ss_pred             CCEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECch
Confidence            4667888732   234456789999999998532   3455666664 4456789999999877765

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.98  E-value=8.3e-06  Score=61.38  Aligned_cols=62  Identities=13%  Similarity=0.151  Sum_probs=39.3

Q ss_pred             cceEEEeeccCCCC--HHHHHHHHHHHHHHhcCC-C--cceeeEEeEEecC---CccEEEEeeCCCCCHH
Q psy2674          18 TSVLMAKSLVHSKD--DEALHEFKREIDLFCKLD-H--AHVVKMIGICRDG---DPHYLLLEYTDWGDLK   79 (183)
Q Consensus        18 ~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-h--~~i~~~~~~~~~~---~~~~lv~e~~~~~~L~   79 (183)
                      +..+++|.......  ......+.+|...++.+. +  ..+.+++.++.++   +..+++||+++|.++.
T Consensus        52 ~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A           52 QQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             EEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCC
T ss_pred             CceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChh
Confidence            67788887653220  000125677888888773 2  3566777777655   3568999999976543

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.94  E-value=4.6e-05  Score=58.20  Aligned_cols=71  Identities=13%  Similarity=0.058  Sum_probs=41.3

Q ss_pred             CCCceeeeccCCCCcceEEEeeccCCCC---H---HHHHHHHHHHHHHhcCC-C-c-ceeeEEeEEecCCccEEEEeeCC
Q psy2674           4 IPNARGLKASDPQDTSVLMAKSLVHSKD---D---EALHEFKREIDLFCKLD-H-A-HVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         4 ~~~~~~~~~~~~~~~~~vavK~~~~~~~---~---~~~~~~~~E~~~l~~l~-h-~-~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      -+.+.+|++....+++.+++|.......   .   ...+++..|.+.++.+. . + .+.+++.+  +++..+++||+++
T Consensus        41 G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lvmE~l~  118 (397)
T 2olc_A           41 GNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLS  118 (397)
T ss_dssp             SSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCT
T ss_pred             CceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEEEEeCC
Confidence            3456788886666678899998653211   0   11235677888888763 2 3 33455544  3456789999998


Q ss_pred             CC
Q psy2674          75 WG   76 (183)
Q Consensus        75 ~~   76 (183)
                      +.
T Consensus       119 g~  120 (397)
T 2olc_A          119 HL  120 (397)
T ss_dssp             TS
T ss_pred             Cc
Confidence            63

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.89  E-value=0.00021  Score=53.07  Aligned_cols=33  Identities=15%  Similarity=0.136  Sum_probs=28.7

Q ss_pred             cCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674         124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus       124 ~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      ...++|+|+++.||+++.++.+.++||+.+...
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~g  253 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSFD  253 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTCEEC
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhcccC
Confidence            357999999999999987889999999988633

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.44  E-value=0.00097  Score=49.56  Aligned_cols=33  Identities=24%  Similarity=0.194  Sum_probs=27.6

Q ss_pred             cCCceecccccceeEeccC----CceEEecccCCCCC
Q psy2674         124 DKRLIHKDIAARNCLISSD----LSVKISLSGLSKDT  156 (183)
Q Consensus       124 ~~~ivH~di~~~nil~~~~----~~~ki~dfg~a~~~  156 (183)
                      ...++|+|+.+.||+++.+    +.+.++||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            3478999999999999764    68999999988643

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.22  E-value=0.00058  Score=50.08  Aligned_cols=29  Identities=21%  Similarity=-0.005  Sum_probs=24.8

Q ss_pred             CceecccccceeEeccCCceEEecccCCCC
Q psy2674         126 RLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      .++|+|+.+.||+ ..++.+.++||..+..
T Consensus       174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCENFL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence            4799999999999 5666789999998763

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.08  E-value=0.011  Score=43.60  Aligned_cols=28  Identities=21%  Similarity=0.076  Sum_probs=24.6

Q ss_pred             CCceecccccceeEeccCCceEEecccCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      ..++|+|+++.||+++ + .+.++||+.+.
T Consensus       195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~  222 (328)
T 1zyl_A          195 VLRLHGDCHAGNILWR-D-GPMFVDLDDAR  222 (328)
T ss_dssp             CEECCSSCSGGGEEES-S-SEEECCCTTCC
T ss_pred             eeeeeCCCCcccEeEc-C-CCEEEECCCCC
Confidence            4578999999999998 4 89999998776

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=96.99  E-value=0.0054  Score=45.38  Aligned_cols=64  Identities=22%  Similarity=0.196  Sum_probs=46.6

Q ss_pred             eeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC---CcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           9 GLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD---HAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         9 ~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|+...  ++..+++|.....    ....+.+|...++.+.   ...+.+++.+...++..+++|||+++.++
T Consensus        52 ~y~v~~--~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~  118 (312)
T 3jr1_A           52 IWLIND--EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN  118 (312)
T ss_dssp             EEEEES--SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred             eeEEEE--CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence            454443  4678888886532    2446788998888872   36678888888877889999999997654

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=96.98  E-value=0.0023  Score=48.74  Aligned_cols=30  Identities=27%  Similarity=0.200  Sum_probs=26.5

Q ss_pred             CceecccccceeEeccC----CceEEecccCCCC
Q psy2674         126 RLIHKDIAARNCLISSD----LSVKISLSGLSKD  155 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~----~~~ki~dfg~a~~  155 (183)
                      .++|+|+.+.||+++.+    +.+.++||..|..
T Consensus       221 ~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~  254 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY  254 (379)
T ss_dssp             EEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence            57999999999999876    7899999998863

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=96.27  E-value=0.0053  Score=47.17  Aligned_cols=34  Identities=18%  Similarity=0.227  Sum_probs=29.1

Q ss_pred             hcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674         123 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus       123 h~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      +...++|+|++|.|||++.++ +.++||+.+....
T Consensus       230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~  263 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGP  263 (420)
T ss_dssp             BCCEEECSCCSGGGEEECSSC-EEECCCTTCEEEC
T ss_pred             CCCeEEecCCCCCcEEEeCCC-CEEEeCcccccCc
Confidence            567899999999999998766 9999999987444

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=96.17  E-value=0.026  Score=40.89  Aligned_cols=66  Identities=20%  Similarity=0.129  Sum_probs=40.4

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-C--cceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-H--AHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h--~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      .+++|+.. ..+|+.+.+|........ ....+.+|...|+.+. .  ..+.+++..    +..+++|||+++..
T Consensus        28 ~~~vyrv~-l~DG~~~~vK~~~~~~~~-~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~   96 (288)
T 3f7w_A           28 RWHLYRVE-LADGTPLFVKALPDDAPA-LDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP   96 (288)
T ss_dssp             TEEEEEEE-ETTSCEEEEEECCTTCCC-CTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred             CeEEEEEE-ECCCCEEEEEEeCCCCcc-hhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence            34566554 357889999986533221 1235778998888873 2  234445544    23478999987654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=95.21  E-value=0.0065  Score=44.71  Aligned_cols=30  Identities=17%  Similarity=0.091  Sum_probs=26.2

Q ss_pred             CCceecccccceeEeccCCceEEecccCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      .+++|+|+.+.||+++.+..+.++||+.+.
T Consensus       187 ~~liHgDl~~~Nil~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccCEEEeCCceEEEecchhcc
Confidence            368999999999999877667899999876

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=93.40  E-value=0.039  Score=41.46  Aligned_cols=28  Identities=14%  Similarity=0.197  Sum_probs=23.9

Q ss_pred             CceecccccceeEeccCCceEEecccCCC
Q psy2674         126 RLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      .++|+|+.+.||+++.+. +.++||..+.
T Consensus       213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINTNKC-LRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred             EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence            589999999999997654 8999998876

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=93.30  E-value=0.088  Score=39.20  Aligned_cols=30  Identities=30%  Similarity=0.232  Sum_probs=26.7

Q ss_pred             CCceecccccceeEeccCCceEEecccCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      ..++|+|+.+.||+++.++.+.++||+.+.
T Consensus       206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~  235 (339)
T 3i1a_A          206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPM  235 (339)
T ss_dssp             CEEECSCCCGGGEEECGGGCEEECCCSSCE
T ss_pred             ceeEeCCCCcCCEEEeCCCeEEEEECCCCe
Confidence            468999999999999887889999998765

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=92.71  E-value=0.047  Score=42.14  Aligned_cols=53  Identities=17%  Similarity=0.146  Sum_probs=32.3

Q ss_pred             cceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674          18 TSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus        18 ~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      +..+++|+......   .+.+.+|..+++.+. +.-..++++.+.+    .+++||++|.+
T Consensus       105 ~~~~vlRi~~~~~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e~l~G~~  158 (429)
T 1nw1_A          105 PNKVLLRVYFNPET---ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRP  158 (429)
T ss_dssp             CSEEEEEEECSCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEE
T ss_pred             CceEEEEEeCCCCc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEEEeCCcc
Confidence            57888988743222   124557888888773 3223456665532    38899998533

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=92.34  E-value=0.073  Score=41.51  Aligned_cols=64  Identities=17%  Similarity=0.199  Sum_probs=35.9

Q ss_pred             eeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcce-eeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           9 GLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHV-VKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         9 ~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      +|+.....++..+++|+....... .. .-.+|..+++.+...++ .++++.+.  +  ..++||++|.+|
T Consensus       124 ~y~v~~~~~~~~~vLRi~g~~~~~-~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l  188 (458)
T 2qg7_A          124 LIKVKDMSKQAKYLIRLYGPKTDE-II-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL  188 (458)
T ss_dssp             EEEEEETTTTEEEEEEEECC-CCS-CS-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred             EEEEEECCCCceEEEEECCCChhh-hc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence            454443333577888886432211 00 11478888888754333 45666663  2  359999986443

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=90.68  E-value=0.14  Score=39.11  Aligned_cols=29  Identities=21%  Similarity=0.166  Sum_probs=24.8

Q ss_pred             ceecccccceeEe------ccCCceEEecccCCCC
Q psy2674         127 LIHKDIAARNCLI------SSDLSVKISLSGLSKD  155 (183)
Q Consensus       127 ivH~di~~~nil~------~~~~~~ki~dfg~a~~  155 (183)
                      ++|+|+.+.|||+      +....+.++||..|..
T Consensus       246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence            5799999999999      3467799999998873

>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}

Probab=88.36  E-value=3.1  Score=28.97  Aligned_cols=88  Identities=9%  Similarity=0.073  Sum_probs=59.1

Q ss_pred             CCcceeeEEeEEecCCccEEEEeeCC-CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCc
Q psy2674          49 DHAHVVKMIGICRDGDPHYLLLEYTD-WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL  127 (183)
Q Consensus        49 ~h~~i~~~~~~~~~~~~~~lv~e~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i  127 (183)
                      .||++  --..-.+++.+.+.++.-+ +.+.....                   ..+....++++.+++..... |...-
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-------------------~~~~~eKlrll~nl~~L~~~-~~~~r  105 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-------------------KTTLLSRIRAAIHLVSKVKH-HSARR  105 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-------------------TSCHHHHHHHHHHHHHHHSS-CCSSS
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-------------------hcCHHHHHHHHHHHHHHHHH-hhhCc
Confidence            56776  3333356677777666542 23344332                   47778888888877665441 33456


Q ss_pred             eecccccceeEeccCCceEEecccCCCCCCc
Q psy2674         128 IHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       128 vH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      +|--++|.|++++.++.+++.-.|+-....+
T Consensus       106 ~tf~l~P~NL~f~~~~~p~i~hRGi~~~lpP  136 (219)
T 4ano_A          106 LIFIVCPENLMFNRALEPFFLHVGVKESLPP  136 (219)
T ss_dssp             EECCCCGGGEEECTTCCEEESCCEETTTBSS
T ss_pred             eeEEEeCceEEEeCCCcEEEEEcCCcccCCC
Confidence            7889999999999999999999998664433

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=88.09  E-value=0.24  Score=38.16  Aligned_cols=29  Identities=17%  Similarity=0.211  Sum_probs=25.8

Q ss_pred             CceecccccceeEeccCCceEEecccCCCC
Q psy2674         126 RLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus       126 ~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      .++|+|+.+.||+ +..+.+.++||..|..
T Consensus       263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred             eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence            4789999999999 7888999999998863

>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}

Probab=86.99  E-value=1.4  Score=30.63  Aligned_cols=89  Identities=10%  Similarity=0.055  Sum_probs=59.4

Q ss_pred             CCcceeeEEeEEecCCccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCce
Q psy2674          49 DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI  128 (183)
Q Consensus        49 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~iv  128 (183)
                      .+|+++.. .+-.+++.+.+.++.-+  +..++-.-.                ..+....+.++.+++...++  ...-+
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~ik----------------~~~~~eKlr~l~ni~~l~~~--~~~r~  101 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNIK----------------SFTKNEKLRYLLNIKNLEEV--NRTRY  101 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGGG----------------GSCHHHHHHHHHHGGGGGGG--GGSSE
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHHH----------------hcCHHHHHHHHHHHHHHHHH--hcCce
Confidence            57877765 45556666666555432  222222111                46778888888888776633  33456


Q ss_pred             ecccccceeEeccCCceEEecccCCCCCCc
Q psy2674         129 HKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus       129 H~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      |--++|.|++++.++.+++.--|+.....+
T Consensus       102 tf~L~P~NL~f~~~~~p~i~~RGik~~l~P  131 (215)
T 4ann_A          102 TFVLAPDELFFTRDGLPIAKTRGLQNVVDP  131 (215)
T ss_dssp             ECCCSGGGEEECTTSCEEESCCEETTTBSC
T ss_pred             EEEEecceEEEcCCCCEEEEEccCccCCCC
Confidence            888999999999999999999987654433

>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*

Probab=84.51  E-value=6.5  Score=32.35  Aligned_cols=25  Identities=16%  Similarity=-0.007  Sum_probs=23.0

Q ss_pred             cccccceeEeccCCceEEecccCCC
Q psy2674         130 KDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus       130 ~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +|=+++|||++..|.+.=+|||++-
T Consensus       551 GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          551 GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             CCCCCcceEEeCCCCEEEEeehhhh
Confidence            5889999999999999999999875

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=82.93  E-value=5.3  Score=27.96  Aligned_cols=60  Identities=18%  Similarity=0.190  Sum_probs=45.5

Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEec
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISL  149 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~d  149 (183)
                      -+|.+.+...+.              +++++++|.++.|.+.++...-. ..-..+=+.|..|++..+|.+-+.+
T Consensus        33 vSL~eIL~~~~~--------------PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~   93 (229)
T 2yle_A           33 LSLEEILRLYNQ--------------PINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP   93 (229)
T ss_dssp             EEHHHHHHHHTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred             ccHHHHHHHcCC--------------CcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc
Confidence            468999988765              79999999999999999877621 1112344457888898888888775

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	183
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	3e-26
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-26
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-26
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-25
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	3e-24
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-22
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-22
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-22
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-22
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-22
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-22
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-22
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	7e-22
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	1e-21
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-21
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-21
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-20
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-20
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-20
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-20
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-20
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-20
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-19
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-19
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-19
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-19
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	4e-19
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	1e-18
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	2e-18
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-18
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	8e-18
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	1e-17
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-17
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-17
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-17
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	2e-16
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-16
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-16
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	8e-16
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-15
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-15
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-15
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-15
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	6e-15
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-14
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-14
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	6e-14
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-13
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-13
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	4e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-11
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	6e-11
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	9e-11
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-10
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-10
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-09
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	2e-09
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	1e-06
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	2e-04

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.9 bits (248), Expect = 3e-26
 Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDP 65
           A     S    +  +  K L    D         E+ +  +L  H ++V ++G C    P
Sbjct: 56  ATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 115

Query: 66  HYLLLEYTDWGDLKQFLLATRKD--------SKDKSGSGKPRVRSLSTSQAVTMAYQVAL 117
            YL+ EY  +GDL  +L + R+            K    +  +  L+    +  AYQVA 
Sbjct: 116 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 175

Query: 118 GLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
           G+E +  K  +H+D+AARN L++    VKI   GL++D      Y  R    
Sbjct: 176 GMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNAR 227

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.9 bits (246), Expect = 4e-26
 Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 14/151 (9%)

Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
           +TSVL A  ++ +K +E L ++  EID+    DH ++VK++      +  ++L+E+   G
Sbjct: 35  ETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGG 94

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            +   +L                 R L+ SQ   +  Q    L ++ D ++IH+D+ A N
Sbjct: 95  AVDAVMLELE--------------RPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGN 140

Query: 137 CLISSDLSVKISLSGLSKDTYQKEYYKYRWV 167
            L + D  +K++  G+S    +    +  ++
Sbjct: 141 ILFTLDGDIKLADFGVSAKNTRTIQRRDSFI 171

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 98.8 bits (245), Expect = 5e-26
 Identities = 51/164 (31%), Positives = 89/164 (54%), Gaps = 10/164 (6%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
                P +   ++A K L      +   +F+RE  L  + D+ ++VK++G+C  G P  L
Sbjct: 34  APGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCL 93

Query: 69  LLEYTDWGDLKQFLLATRK---------DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGL 119
           L EY  +GDL +FL +            D   ++    P    LS ++ + +A QVA G+
Sbjct: 94  LFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGM 153

Query: 120 EHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
            ++S+++ +H+D+A RNCL+  ++ VKI+  GLS++ Y  +YYK
Sbjct: 154 AYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 197

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.1 bits (238), Expect = 6e-25
 Identities = 42/161 (26%), Positives = 83/161 (51%), Gaps = 6/161 (3%)

Query: 10  LKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
            K     +    +A K++  +       EF  E  +  + +  HVV+++G+   G P  +
Sbjct: 41  AKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLV 100

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++E    GDLK +L + R    +      P +   S S+ + MA ++A G+ +++  + +
Sbjct: 101 IMELMTRGDLKSYLRSLRPAMANN-----PVLAPPSLSKMIQMAGEIADGMAYLNANKFV 155

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
           H+D+AARNC+++ D +VKI   G+++D Y+ +YY+      
Sbjct: 156 HRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGL 196

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 3e-24
 Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 4/167 (2%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDP 65
           A             +  K L  S           E+ +   L +H ++V ++G C  G P
Sbjct: 42  ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101

Query: 66  HYLLLEYTDWGDLKQFLLATRKD---SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI 122
             ++ EY  +GDL  FL   R     SK      +    +L     ++ +YQVA G+  +
Sbjct: 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 161

Query: 123 SDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
           + K  IH+D+AARN L++     KI   GL++D      Y  +    
Sbjct: 162 ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNAR 208

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.3 bits (221), Expect = 1e-22
 Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 15/143 (10%)

Query: 27  VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATR 86
           V +   + L  FK E+ +  K  H +++  +G         ++ ++ +   L   L    
Sbjct: 40  VTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHIIE 98

Query: 87  KDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVK 146
                               + + +A Q A G++++  K +IH+D+ + N  +  DL+VK
Sbjct: 99  T--------------KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVK 144

Query: 147 ISLSGLSKDTYQKEYYKYRWVIC 169
           I   GL+    +         + 
Sbjct: 145 IGDFGLATVKSRWSGSHQFEQLS 167

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.2 bits (220), Expect = 2e-22
 Identities = 48/164 (29%), Positives = 88/164 (53%), Gaps = 2/164 (1%)

Query: 8   RGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPH 66
            GL    P   + +  K L     ++ L +   E+++   +  H +++ ++G C    P 
Sbjct: 35  IGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 94

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHISDK 125
           Y+++EY   G+L+++L A R    + S +        LS+   V+ AYQVA G+E+++ K
Sbjct: 95  YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK 154

Query: 126 RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
           + IH+D+AARN L++ D  +KI+  GL++D +  +YYK      
Sbjct: 155 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGR 198

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 2e-22
 Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 2/137 (1%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFL 82
           K +      +   +F  E+++ CKL  H +++ ++G C      YL +EY   G+L  FL
Sbjct: 43  KRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFL 102

Query: 83  LATRKDSKDKSGS-GKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
             +R    D + +       +LS+ Q +  A  VA G++++S K+ IH+D+AARN L+  
Sbjct: 103 RKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE 162

Query: 142 DLSVKISLSGLSKDTYQ 158
           +   KI+  GLS+    
Sbjct: 163 NYVAKIADFGLSRGQEV 179

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.2 bits (218), Expect = 3e-22
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 14/135 (10%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
            +   +  EF  E  +   L H  +V++ G+C    P +++ EY   G L  +L   R  
Sbjct: 37  KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH- 95

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                           T Q + M   V   +E++  K+ +H+D+AARNCL++    VK+S
Sbjct: 96  -------------RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS 142

Query: 149 LSGLSKDTYQKEYYK 163
             GLS+     EY  
Sbjct: 143 DFGLSRYVLDDEYTS 157

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.9 bits (220), Expect = 3e-22
 Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 17/154 (11%)

Query: 11  KASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
            A D +++ V+  K + +S    +E   +  +E+    KL H + ++  G        +L
Sbjct: 33  FARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 92

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY          +  +                L   +   + +    GL ++    +I
Sbjct: 93  VMEYCLGSASDLLEVHKKP---------------LQEVEIAAVTHGALQGLAYLHSHNMI 137

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           H+D+ A N L+S    VK+   G +        +
Sbjct: 138 HRDVKAGNILLSEPGLVKLGDFGSASIMAPANSF 171

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.6 bits (219), Expect = 5e-22
 Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           K S      V+  K +         ++  RE+ +  + +  ++V   G         + +
Sbjct: 24  KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 83

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHI-SDKRLIH 129
           E+ D G L Q L                +   +       ++  V  GL ++    +++H
Sbjct: 84  EHMDGGSLDQVL---------------KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMH 128

Query: 130 KDIAARNCLISSDLSVKISLSGLSK---DTYQKEYYKYRWVICSNIAEGRRLNV 180
           +D+   N L++S   +K+   G+S    D+    +   R  +     +G   +V
Sbjct: 129 RDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSV 182

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 88.3 bits (218), Expect = 5e-22
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 14/147 (9%)

Query: 8   RGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHY 67
            G      +    +  K+L     ++   +F  E  +  + DH +V+ + G+     P  
Sbjct: 44  SGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVM 103

Query: 68  LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRL 127
           ++ E+ + G L  F               +      +  Q V M   +A G+++++D   
Sbjct: 104 IITEFMENGSLDSF--------------LRQNDGQFTVIQLVGMLRGIAAGMKYLADMNY 149

Query: 128 IHKDIAARNCLISSDLSVKISLSGLSK 154
           +H+D+AARN L++S+L  K+S  GLS+
Sbjct: 150 VHRDLAARNILVNSNLVCKVSDFGLSR 176

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.5 bits (216), Expect = 7e-22
 Identities = 38/142 (26%), Positives = 69/142 (48%), Gaps = 15/142 (10%)

Query: 24  KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLL 83
           K L    +     E  RE  +  +LD+ ++V++IG+C+      L++E    G L +FL+
Sbjct: 42  KVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLV 100

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
             R+               +  S    + +QV++G++++ +K  +H+D+AARN L+ +  
Sbjct: 101 GKRE--------------EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRH 146

Query: 144 SVKISLSGLSKDTYQKEYYKYR 165
             KIS  GLSK     + Y   
Sbjct: 147 YAKISDFGLSKALGADDSYYTA 168

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 1e-21
 Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 14/139 (10%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH-YLLLEYTDWGDLKQFLLATRKD 88
           K+D     F  E  +  +L H+++V+++G+  +     Y++ EY   G L  +L +  + 
Sbjct: 39  KNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR- 97

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                         L     +  +  V   +E++     +H+D+AARN L+S D   K+S
Sbjct: 98  ------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS 145

Query: 149 LSGLSKDTYQKEYYKYRWV 167
             GL+K+    +      V
Sbjct: 146 DFGLTKEASSTQDTGKLPV 164

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 2e-21
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 17/156 (10%)

Query: 11  KASDPQDTSVLMAKSL--VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
            A + Q   +L  K L     +     H+ +RE+++   L H +++++ G   D    YL
Sbjct: 24  LAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 83

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           +LEY   G + + L                ++      +  T   ++A  L +   KR+I
Sbjct: 84  ILEYAPLGTVYREL---------------QKLSKFDEQRTATYITELANALSYCHSKRVI 128

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY 164
           H+DI   N L+ S   +KI+  G S           
Sbjct: 129 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL 164

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.2 bits (213), Expect = 2e-21
 Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 15/159 (9%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
            A +      +  K +   +  +     K+EI +   L+H +VVK  G  R+G+  YL L
Sbjct: 23  LAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 82

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           EY   G+L   +                    +    A    +Q+  G+ ++    + H+
Sbjct: 83  EYCSGGELFDRIEPDIG---------------MPEPDAQRFFHQLMAGVVYLHGIGITHR 127

Query: 131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
           DI   N L+    ++KIS  GL+         +    +C
Sbjct: 128 DIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC 166

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 84.4 bits (208), Expect = 1e-20
 Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 15/154 (9%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           +    + +  +  K+L   +D   + EF +E  +  ++ H ++V+++G+C    P Y++ 
Sbjct: 35  EGVWKKYSLTVAVKTL--KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 92

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           E+  +G+L  +L    +             + +S    + MA Q++  +E++  K  IH+
Sbjct: 93  EFMTYGNLLDYLRECNR-------------QEVSAVVLLYMATQISSAMEYLEKKNFIHR 139

Query: 131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY 164
           D+AARNCL+  +  VK++  GLS+      Y  +
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH 173

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.6 bits (206), Expect = 2e-20
 Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 14/139 (10%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
            +   +   F  E +L  +L H  +V++  +    +P Y++ EY + G L  FL      
Sbjct: 46  KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLK----- 99

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                    P    L+ ++ + MA Q+A G+  I ++  IH+D+ A N L+S  LS KI+
Sbjct: 100 --------TPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA 151

Query: 149 LSGLSKDTYQKEYYKYRWV 167
             GL++     EY      
Sbjct: 152 DFGLARLIEDNEYTAREGA 170

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 84.3 bits (208), Expect = 2e-20
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 16/159 (10%)

Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            T  +     +++      +  K EI +  +L H  ++ +     D     L+LE+   G
Sbjct: 52  ATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGG 111

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
           +L   + A                  +S ++ +    Q   GL+H+ +  ++H DI   N
Sbjct: 112 ELFDRIAA--------------EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN 157

Query: 137 CLISS--DLSVKISLSGLSKDTYQKEYYKYRWVICSNIA 173
            +  +    SVKI   GL+      E  K         A
Sbjct: 158 IMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAA 196

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 2e-20
 Identities = 29/140 (20%), Positives = 62/140 (44%), Gaps = 14/140 (10%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
            +   +  +F  E ++  KL H  +V++ G+C +  P  L+ E+ + G L  +       
Sbjct: 38  REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY------- 90

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                   + +    +    + M   V  G+ ++ +  +IH+D+AARNCL+  +  +K+S
Sbjct: 91  -------LRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS 143

Query: 149 LSGLSKDTYQKEYYKYRWVI 168
             G+++     +Y       
Sbjct: 144 DFGMTRFVLDDQYTSSTGTK 163

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (204), Expect = 3e-20
 Identities = 36/135 (26%), Positives = 68/135 (50%), Gaps = 16/135 (11%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
            + D     E   E ++  +LD+ ++V+MIGIC + +   L++E  + G L ++L     
Sbjct: 45  EANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL----- 98

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                      + R +     + + +QV++G++++ +   +H+D+AARN L+ +    KI
Sbjct: 99  ----------QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKI 148

Query: 148 SLSGLSKDTYQKEYY 162
           S  GLSK     E Y
Sbjct: 149 SDFGLSKALRADENY 163

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.5 bits (203), Expect = 4e-20
 Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 16/151 (10%)

Query: 14  DPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEY 72
            P++ ++ +A K+  +   D    +F +E     + DH H+VK+IG+  + +P ++++E 
Sbjct: 30  SPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMEL 88

Query: 73  TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI 132
              G+L+ FL                R  SL  +  +  AYQ++  L ++  KR +H+DI
Sbjct: 89  CTLGELRSFLQV--------------RKYSLDLASLILYAYQLSTALAYLESKRFVHRDI 134

Query: 133 AARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           AARN L+SS+  VK+   GLS+      YYK
Sbjct: 135 AARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 165

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.7 bits (204), Expect = 5e-20
 Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 16/151 (10%)

Query: 17  DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG 76
            T   +A   ++ +          EI +  +  + ++V  +     GD  ++++EY   G
Sbjct: 43  ATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGG 102

Query: 77  DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARN 136
            L   +  T  D                  Q   +  +    LE +   ++IH+DI + N
Sbjct: 103 SLTDVVTETCMDEG----------------QIAAVCRECLQALEFLHSNQVIHRDIKSDN 146

Query: 137 CLISSDLSVKISLSGLSKDTYQKEYYKYRWV 167
            L+  D SVK++  G       ++  +   V
Sbjct: 147 ILLGMDGSVKLTDFGFCAQITPEQSKRSTMV 177

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 82.4 bits (203), Expect = 1e-19
 Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 14/154 (9%)

Query: 16  QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDW 75
           + T    A   V +  +      ++EI     L H  +V +     D +   ++ E+   
Sbjct: 48  RATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSG 107

Query: 76  GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAAR 135
           G+L + +                    +S  +AV    QV  GL H+ +   +H D+   
Sbjct: 108 GELFEKVADEHN--------------KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPE 153

Query: 136 NCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
           N + ++  S ++ L       +       +    
Sbjct: 154 NIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTG 187

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.0 bits (199), Expect = 2e-19
 Identities = 37/156 (23%), Positives = 72/156 (46%), Gaps = 16/156 (10%)

Query: 8   RGLKASDPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH 66
           +GL   + +   + +A K L  +   +A  E   E  +   +D+ HV +++GIC      
Sbjct: 27  KGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 85

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
            L+ +   +G L  ++   + +                +   +    Q+A G+ ++ D+R
Sbjct: 86  QLITQLMPFGCLLDYVREHKDNI--------------GSQYLLNWCVQIAKGMNYLEDRR 131

Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
           L+H+D+AARN L+ +   VKI+  GL+K    +E  
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 167

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.4 bits (198), Expect = 3e-19
 Identities = 28/142 (19%), Positives = 57/142 (40%), Gaps = 15/142 (10%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
           H   +  +    RE D+  +LDH   VK+    +D +  Y  L Y   G+L +++     
Sbjct: 45  HIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI----- 99

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                      ++ S   +       ++   LE++  K +IH+D+   N L++ D+ ++I
Sbjct: 100 ----------RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQI 149

Query: 148 SLSGLSKDTYQKEYYKYRWVIC 169
           +  G +K    +          
Sbjct: 150 TDFGTAKVLSPESKQARANSFV 171

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.6 bits (198), Expect = 4e-19
 Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 16/154 (10%)

Query: 14  DPQDTSVLMA-KSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH-YLLLE 71
           D     +  A KSL    D   + +F  E  +     H +V+ ++GIC   +    ++L 
Sbjct: 50  DNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLP 109

Query: 72  YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKD 131
           Y   GDL+ F               +    + +    +    QVA G++ ++ K+ +H+D
Sbjct: 110 YMKHGDLRNF--------------IRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRD 155

Query: 132 IAARNCLISSDLSVKISLSGLSKDTYQKEYYKYR 165
           +AARNC++    +VK++  GL++D Y KE+    
Sbjct: 156 LAARNCMLDEKFTVKVADFGLARDMYDKEFDSVH 189

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.3 bits (197), Expect = 4e-19
 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 14/155 (9%)

Query: 10  LKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           LK S  +    +  K+L     ++   +F  E  +  +  H +++++ G+     P  ++
Sbjct: 28  LKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 87

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            EY + G L +FL     +               S  Q V M   +A G++++++   +H
Sbjct: 88  TEYMENGALDKFLREKDGE--------------FSVLQLVGMLRGIAAGMKYLANMNYVH 133

Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKY 164
           +D+AARN L++S+L  K+S  GLS+         Y
Sbjct: 134 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATY 168

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.2 bits (194), Expect = 1e-18
 Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 3/166 (1%)

Query: 7   ARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREID-LFCKLDHAHVVKMIGIC-RDGD 64
           A             +  K L              E+  L     H +VV ++G C + G 
Sbjct: 32  ADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 91

Query: 65  PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRS-LSTSQAVTMAYQVALGLEHIS 123
           P  +++E+  +G+L  +L + R +      + +   +  L+    +  ++QVA G+E ++
Sbjct: 92  PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 151

Query: 124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
            ++ IH+D+AARN L+S    VKI   GL++D Y+   Y  +    
Sbjct: 152 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 197

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 2e-18
 Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 17/153 (11%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
             +    T V + K+L       +   F +E  +  KL H  +V++  +  + +P Y++ 
Sbjct: 35  MGTWNGTTRVAI-KTL--KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 90

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           EY   G L  FL                  + L   Q V MA Q+A G+ ++     +H+
Sbjct: 91  EYMSKGSLLDFLK-------------GETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 137

Query: 131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           D+ A N L+  +L  K++  GL++     EY  
Sbjct: 138 DLRAANILVGENLVCKVADFGLARLIEDNEYTA 170

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.0 bits (189), Expect = 8e-18
 Identities = 23/159 (14%), Positives = 56/159 (35%), Gaps = 18/159 (11%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           +  +       MAK +     D+ L   K+EI +     H +++ +       +   ++ 
Sbjct: 23  RCVETSSKKTYMAKFVKVKGTDQVL--VKKEISILNIARHRNILHLHESFESMEELVMIF 80

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           E+    D+ + +                    L+  + V+  +QV   L+ +    + H 
Sbjct: 81  EFISGLDIFERI--------------NTSAFELNEREIVSYVHQVCEALQFLHSHNIGHF 126

Query: 131 DIAARNCLISSDLSVKISLS--GLSKDTYQKEYYKYRWV 167
           DI   N +  +  S  I +   G ++     + ++  + 
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFT 165

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 77.0 bits (189), Expect = 8e-18
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 18/156 (11%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
            A D +   ++  K +     +      + EI +  K+ H ++V +  I   G   YL++
Sbjct: 27  LAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM 86

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           +    G+L   ++                    +   A  + +QV   ++++ D  ++H+
Sbjct: 87  QLVSGGELFDRIVEKGF---------------YTERDASRLIFQVLDAVKYLHDLGIVHR 131

Query: 131 DIAARNCLISS---DLSVKISLSGLSKDTYQKEYYK 163
           D+   N L  S   D  + IS  GLSK         
Sbjct: 132 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLS 167

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.2 bits (189), Expect = 1e-17
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 20/160 (12%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD----PH 66
            A D  +   +  K +   +         REI +  +  H +++ +  I R         
Sbjct: 26  SAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 85

Query: 67  YLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR 126
             L+ +    DL + L                + + LS        YQ+  GL++I    
Sbjct: 86  VYLVTHLMGADLYKLL----------------KTQHLSNDHICYFLYQILRGLKYIHSAN 129

Query: 127 LIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRW 166
           ++H+D+   N L+++   +KI   GL++       +    
Sbjct: 130 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL 169

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 2e-17
 Identities = 26/139 (18%), Positives = 55/139 (39%), Gaps = 15/139 (10%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRKD 88
             DD+       +  L    +H  +  M    +  +  + ++EY + GDL   + +  K 
Sbjct: 41  LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK- 99

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKIS 148
                            S+A   A ++ LGL+ +  K ++++D+   N L+  D  +KI+
Sbjct: 100 --------------FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIA 145

Query: 149 LSGLSKDTYQKEYYKYRWV 167
             G+ K+    +     + 
Sbjct: 146 DFGMCKENMLGDAKTNTFC 164

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (184), Expect = 2e-17
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 19/160 (11%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEA-LHEFKREIDLFCKLDHAHVVKMIGIC--RDGDPHY 67
           K     D  +L+ K L +    EA       E++L  +L H ++V+       R     Y
Sbjct: 22  KIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 81

Query: 68  LLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK-- 125
           +++EY + GDL   +    K+ +            L     + +  Q+ L L+    +  
Sbjct: 82  IVMEYCEGGDLASVITKGTKERQ-----------YLDEEFVLRVMTQLTLALKECHRRSD 130

Query: 126 ---RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYY 162
               ++H+D+   N  +    +VK+   GL++       +
Sbjct: 131 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 170

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 3e-17
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 15/135 (11%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
                EA+ +F RE++    LDH +++++ G+     P  ++ E    G L         
Sbjct: 48  VLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP-PMKMVTELAPLGSLLDR------ 100

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                    +              A QVA G+ ++  KR IH+D+AARN L+++   VKI
Sbjct: 101 --------LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKI 152

Query: 148 SLSGLSKDTYQKEYY 162
              GL +   Q + +
Sbjct: 153 GDFGLMRALPQNDDH 167

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 72.6 bits (177), Expect = 2e-16
 Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 15/159 (9%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLL 70
           KA +    +  + K  +  +D+       REI +  +L H+++VK+  +        L+ 
Sbjct: 20  KAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79

Query: 71  EYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHK 130
           E+    DLK+ L                    L +  A +   Q+  G+ +  D+R++H+
Sbjct: 80  EHL-DQDLKKLLDVCEG--------------GLESVTAKSFLLQLLNGIAYCHDRRVLHR 124

Query: 131 DIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
           D+  +N LI+ +  +KI+  GL++            ++ 
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVT 163

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 73.2 bits (179), Expect = 3e-16
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 15/147 (10%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
            L  K +   + +      +  + L    D   +V M       D    +L+  + GDL 
Sbjct: 36  CLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLH 95

Query: 80  QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
             L      S+                     A ++ LGLEH+ ++ ++++D+   N L+
Sbjct: 96  YHLSQHGVFSEA---------------DMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 140

Query: 140 SSDLSVKISLSGLSKDTYQKEYYKYRW 166
                V+IS  GL+ D  +K+ +    
Sbjct: 141 DEHGHVRISDLGLACDFSKKKPHASVG 167

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 4e-16
 Identities = 29/160 (18%), Positives = 66/160 (41%), Gaps = 15/160 (9%)

Query: 11  KASDPQDTSVLMAKSL-VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           KA +     V+  K + + ++ +       REI L  +L+H ++VK++ +    +  YL+
Sbjct: 20  KARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 79

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            E+      K    +                  +      +  +Q+  GL      R++H
Sbjct: 80  FEFLHQDLKKFMDASALTG--------------IPLPLIKSYLFQLLQGLAFCHSHRVLH 125

Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
           +D+  +N LI+++ ++K++  GL++            V+ 
Sbjct: 126 RDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT 165

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 71.3 bits (174), Expect = 6e-16
 Identities = 23/152 (15%), Positives = 56/152 (36%), Gaps = 16/152 (10%)

Query: 23  AKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
             S    +  E      +E+D+  K+  H +++++          +L+ +    G+L  +
Sbjct: 41  GGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDY 100

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
           L                   +LS  +   +   +   +  +    ++H+D+   N L+  
Sbjct: 101 L---------------TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDD 145

Query: 142 DLSVKISLSGLSKDTYQKEYYKYRWVICSNIA 173
           D+++K++  G S      E  +      S +A
Sbjct: 146 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLA 177

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.7 bits (175), Expect = 8e-16
 Identities = 22/140 (15%), Positives = 49/140 (35%), Gaps = 15/140 (10%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
                + +     E  +     H  +  +    +  D    ++EY + G+L   L     
Sbjct: 42  VIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLS---- 97

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                      R R  +  +A     ++   LE++  + ++++DI   N ++  D  +KI
Sbjct: 98  -----------RERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKI 146

Query: 148 SLSGLSKDTYQKEYYKYRWV 167
           +  GL K+          + 
Sbjct: 147 TDFGLCKEGISDGATMKTFC 166

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.3 bits (174), Expect = 1e-15
 Identities = 25/140 (17%), Positives = 55/140 (39%), Gaps = 15/140 (10%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
                + +     E  +   + H  +++M G  +D    +++++Y + G+L   L  +++
Sbjct: 41  IVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR 100

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                               A   A +V L LE++  K +I++D+   N L+  +  +KI
Sbjct: 101 FPNP---------------VAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKI 145

Query: 148 SLSGLSKDTYQKEYYKYRWV 167
           +  G +K      Y      
Sbjct: 146 TDFGFAKYVPDVTYTLCGTP 165

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 1e-15
 Identities = 23/132 (17%), Positives = 52/132 (39%), Gaps = 12/132 (9%)

Query: 27  VHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH----YLLLEYTDWGDLKQFL 82
           + S  +E     + EI     L H +++  I      +      +L+ +Y + G L  +L
Sbjct: 33  IFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL 92

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
                   ++       +  L+ S A  +A+     +       + H+D+ ++N L+  +
Sbjct: 93  --------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 144

Query: 143 LSVKISLSGLSK 154
            +  I+  GL+ 
Sbjct: 145 GTCCIADLGLAV 156

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 70.2 bits (171), Expect = 2e-15
 Identities = 24/142 (16%), Positives = 51/142 (35%), Gaps = 19/142 (13%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPH----YLLLEYTDWGDLKQFLL 83
            ++D      F+RE      L+H  +V +        P     Y+++EY D   L+  + 
Sbjct: 44  LARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV- 102

Query: 84  ATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL 143
                              ++  +A+ +       L       +IH+D+   N +IS+  
Sbjct: 103 --------------HTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATN 148

Query: 144 SVKISLSGLSKDTYQKEYYKYR 165
           +VK+   G+++          +
Sbjct: 149 AVKVMDFGIARAIADSGNSVTQ 170

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 2e-15
 Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 8/157 (5%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALH-EFKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           KA   +    +  K ++   + E       REI +   L H +VV +I ICR     Y  
Sbjct: 28  KARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 87

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            + + +       L       D +G     +   + S+   +   +  GL +I   +++H
Sbjct: 88  CKGSIY-------LVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILH 140

Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRW 166
           +D+ A N LI+ D  +K++  GL++     +  +   
Sbjct: 141 RDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNR 177

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.0 bits (168), Expect = 4e-15
 Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 17/148 (11%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAH--VVKMIGICRDGDPHYLLLEYTDWGD 77
            +    +    +         E+ L  K+      V++++      D   L+LE  +   
Sbjct: 36  HVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQ 95

Query: 78  LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNC 137
                +  R               +L    A +  +QV   + H  +  ++H+DI   N 
Sbjct: 96  DLFDFITERG--------------ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 141

Query: 138 LISSD-LSVKISLSGLSKDTYQKEYYKY 164
           LI  +   +K+   G         Y  +
Sbjct: 142 LIDLNRGELKLIDFGSGALLKDTVYTDF 169

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (167), Expect = 6e-15
 Identities = 25/158 (15%), Positives = 58/158 (36%), Gaps = 19/158 (12%)

Query: 20  VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK 79
            +  +    S+   +  + +RE+ +  ++ H +V+ +  +  +     L+LE    G+L 
Sbjct: 42  FIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 101

Query: 80  QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLI 139
            F                    SL+  +A     Q+  G+ ++   ++ H D+   N ++
Sbjct: 102 DF---------------LAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 146

Query: 140 SSD----LSVKISLSGLSKDTYQKEYYKYRWVICSNIA 173
                    +KI   GL+        +K  +     +A
Sbjct: 147 LDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVA 184

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.3 bits (166), Expect = 1e-14
 Identities = 23/146 (15%), Positives = 47/146 (32%), Gaps = 15/146 (10%)

Query: 22  MAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF 81
           +         D       REI L  +L H +++ ++          L+ ++ +       
Sbjct: 31  IKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVII 90

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
                          K     L+ S           GLE++    ++H+D+   N L+  
Sbjct: 91  ---------------KDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDE 135

Query: 142 DLSVKISLSGLSKDTYQKEYYKYRWV 167
           +  +K++  GL+K            V
Sbjct: 136 NGVLKLADFGLAKSFGSPNRAYTHQV 161

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 1e-14
 Identities = 33/152 (21%), Positives = 53/152 (34%), Gaps = 23/152 (15%)

Query: 11  KASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGIC----RDGDP 65
           K  D + T  +    L   K        FK E ++   L H ++V+         +    
Sbjct: 27  KGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 86

Query: 66  HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLE--HIS 123
             L+ E    G LK +L                R + +      +   Q+  GL+  H  
Sbjct: 87  IVLVTELMTSGTLKTYL---------------KRFKVMKIKVLRSWCRQILKGLQFLHTR 131

Query: 124 DKRLIHKDIAARNCLISS-DLSVKISLSGLSK 154
              +IH+D+   N  I+    SVKI   GL+ 
Sbjct: 132 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 163

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.7 bits (162), Expect = 5e-14
 Identities = 20/147 (13%), Positives = 57/147 (38%), Gaps = 21/147 (14%)

Query: 36  HEFKREIDLFCKL-DHAHVVKMIGICRD----GDPHYLLLEYTDWGDLKQFLLATRKDSK 90
            + +RE++L  +     H+V+++ +  +         +++E  D G+L   +        
Sbjct: 49  PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGD--- 105

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKI 147
                     ++ +  +A  +   +   ++++    + H+D+   N L +S   +  +K+
Sbjct: 106 ----------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKL 155

Query: 148 SLSGLSKDTYQKEYYKYRWVICSNIAE 174
           +  G +K+T               +A 
Sbjct: 156 TDFGFAKETTSHNSLTTPCYTPYYVAP 182

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.4 bits (161), Expect = 6e-14
 Identities = 27/159 (16%), Positives = 56/159 (35%), Gaps = 17/159 (10%)

Query: 11  KASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYL 68
                +  +    K L   K    + +     E  +   ++   +VK+    +D    Y+
Sbjct: 59  LVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM 118

Query: 69  LLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLI 128
           ++EY   G++   L                R+   S   A   A Q+ L  E++    LI
Sbjct: 119 VMEYVAGGEMFSHL---------------RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163

Query: 129 HKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWV 167
           ++D+   N LI     ++++  G +K    + +      
Sbjct: 164 YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTP 202

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.2 bits (158), Expect = 1e-13
 Identities = 24/139 (17%), Positives = 53/139 (38%), Gaps = 16/139 (11%)

Query: 29  SKDDEALHEFKREIDLFCKLDHA-HVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
            +  +     + E  +   +  +  +V +    +     +L+L+Y + G+L   L     
Sbjct: 66  VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHL----- 120

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
                      +    +  +      ++ L LEH+    +I++DI   N L+ S+  V +
Sbjct: 121 ----------SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVL 170

Query: 148 SLSGLSKDTYQKEYYKYRW 166
           +  GLSK+    E  +   
Sbjct: 171 TDFGLSKEFVADETERAYD 189

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 3e-13
 Identities = 30/160 (18%), Positives = 62/160 (38%), Gaps = 16/160 (10%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHE-FKREIDLFCKLDHAHVVKMIGICRDGDPHYLL 69
           KA + +   ++  K +    DDE +     REI L  +L H ++V++  +        L+
Sbjct: 20  KAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
            E+ D    K F         +                  +  +Q+  GL     + ++H
Sbjct: 80  FEFCDQDLKKYFDSCNGDLDPE---------------IVKSFLFQLLKGLGFCHSRNVLH 124

Query: 130 KDIAARNCLISSDLSVKISLSGLSKDTYQKEYYKYRWVIC 169
           +D+  +N LI+ +  +K++  GL++            V+ 
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVT 164

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 4e-12
 Identities = 25/150 (16%), Positives = 45/150 (30%), Gaps = 19/150 (12%)

Query: 37  EFKREIDLFCKLDHAHVVKMIGICRDGDPH------YLLLEYTDWGDLKQFLLATRKDSK 90
              RE+ +  KLDH ++V++                 L+L+Y      +     +R    
Sbjct: 59  FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAK-- 116

Query: 91  DKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDI-AARNCLISSDLSVKISL 149
                     ++L         YQ+   L +I    + H+DI      L      +K+  
Sbjct: 117 ----------QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 166

Query: 150 SGLSKDTYQKEYYKYRWVICSNIAEGRRLN 179
            G +K   + E            A      
Sbjct: 167 FGSAKQLVRGEPNVSYICSRYYRAPELIFG 196

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 59.5 bits (143), Expect = 2e-11
 Identities = 23/141 (16%), Positives = 53/141 (37%), Gaps = 22/141 (15%)

Query: 31  DDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPH--YLLLEYTDWGDLKQFLLATRK 87
                 + KREI +   L    +++ +  I +D       L+ E+ +  D KQ       
Sbjct: 69  KPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----- 123

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVK 146
                        ++L+        Y++   L++     ++H+D+   N +I  +   ++
Sbjct: 124 -------------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLR 170

Query: 147 ISLSGLSKDTYQKEYYKYRWV 167
           +   GL++  +  + Y  R  
Sbjct: 171 LIDWGLAEFYHPGQEYNVRVA 191

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 57.5 bits (138), Expect = 6e-11
 Identities = 20/114 (17%), Positives = 39/114 (34%), Gaps = 16/114 (14%)

Query: 30  KDDEALHEFKREIDLFCKLDHAHVVKMIGIC-RDGDPHYLLLEYTDWGDLKQFLLATRKD 88
                  +   E  ++  +     +  I  C  +GD + +++E         F   +RK 
Sbjct: 41  CVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK- 99

Query: 89  SKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
                          S    + +A Q+   +E+I  K  IH+D+   N L+   
Sbjct: 100 --------------FSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG 139

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 9e-11
 Identities = 28/158 (17%), Positives = 63/158 (39%), Gaps = 14/158 (8%)

Query: 11  KASDPQDTSVLMA--KSLVHSKDDEALHEFKREIDLFCKL---DHAHVVKMIGICRDGDP 65
           KA D ++    +A  +  V + ++       RE+ +   L   +H +VV++  +C     
Sbjct: 25  KARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 84

Query: 66  HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDK 125
                    +  + Q L        +           + T     M +Q+  GL+ +   
Sbjct: 85  DRETKLTLVFEHVDQDLTTYLDKVPEPG---------VPTETIKDMMFQLLRGLDFLHSH 135

Query: 126 RLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKEYYK 163
           R++H+D+  +N L++S   +K++  GL++    +    
Sbjct: 136 RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALT 173

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 24/156 (15%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHE-FKREIDLFCKLDHAHVVKMIGICRDGDP---- 65
            A D +  + +  K L      E   +   RE+ L   + H +V+ ++ +    +     
Sbjct: 36  SAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 95

Query: 66  --HYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHIS 123
              YL++ +   G     L+   K               L   +   + YQ+  GL +I 
Sbjct: 96  TDFYLVMPF--MGTDLGKLMKHEK---------------LGEDRIQFLVYQMLKGLRYIH 138

Query: 124 DKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK 159
              +IH+D+   N  ++ D  +KI   GL++    +
Sbjct: 139 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 174

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 5e-10
 Identities = 23/145 (15%), Positives = 53/145 (36%), Gaps = 24/145 (16%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICR------DGDPHYLLLEYTDWGDLKQF 81
             ++        RE+ L   ++H +++ ++ +        +    YL++E  D    +  
Sbjct: 53  PFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI 112

Query: 82  LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS 141
                                L   +   + YQ+  G++H+    +IH+D+   N ++ S
Sbjct: 113 Q------------------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 154

Query: 142 DLSVKISLSGLSKDTYQKEYYKYRW 166
           D ++KI   GL++            
Sbjct: 155 DCTLKILDFGLARTAGTSFMMTPYV 179

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 53.3 bits (127), Expect = 2e-09
 Identities = 21/171 (12%), Positives = 49/171 (28%), Gaps = 24/171 (14%)

Query: 11  KASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHA-HVVKMIGICRDGDPHYLL 69
           + ++  +   +  K      D     + + E   +  L     +  +    ++G  + L+
Sbjct: 23  EGTNLLNNQQVAIKFEPRRSDAP---QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 79

Query: 70  LEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIH 129
           ++                             R  S       A Q+   ++ I +K L++
Sbjct: 80  IDLLGPSLEDLL---------------DLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVY 124

Query: 130 KDIAARNCLISSDL-----SVKISLSGLSKDTYQKEYYKYRWVICSNIAEG 175
           +DI   N LI          + +   G+ K        ++          G
Sbjct: 125 RDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSG 175

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 2e-09
 Identities = 24/146 (16%), Positives = 50/146 (34%), Gaps = 21/146 (14%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP-----HYLLLEYTDWGDLKQFL 82
             +         RE+ L   + H +V+ ++ +              L+ +    DL    
Sbjct: 54  PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI- 112

Query: 83  LATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD 142
                           + + L+      + YQ+  GL++I    +IH+D+   N  ++ D
Sbjct: 113 ---------------VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED 157

Query: 143 LSVKISLSGLSKDTYQKEYYKYRWVI 168
             +KI   GL++ T  +         
Sbjct: 158 CELKILDFGLARHTDDEMTGYVATRW 183

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.0 bits (105), Expect = 1e-06
 Identities = 22/146 (15%), Positives = 49/146 (33%), Gaps = 8/146 (5%)

Query: 29  SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD-LKQFLLATRK 87
             D       + EI L  +++ A   K   +  +     L        + +   ++    
Sbjct: 47  RGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL 106

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-LIHKDIAARNCLISSD---- 142
                +   K   R +       ++ Q+ LGL+++  +  +IH DI   N L+       
Sbjct: 107 GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 166

Query: 143 --LSVKISLSGLSKDTYQKEYYKYRW 166
             + +KI+  G +    +      + 
Sbjct: 167 NLIQIKIADLGNACWYDEHYTNSIQT 192

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 38.2 bits (88), Expect = 2e-04
 Identities = 19/147 (12%), Positives = 44/147 (29%), Gaps = 27/147 (18%)

Query: 28  HSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQFLLATRK 87
                 A+   + E     KL    V K+         + +L+E  D  +L +  +    
Sbjct: 51  LHFSVLAIRSARNEFRALQKLQGLAVPKVYAWEG----NAVLMELIDAKELYRVRVENPD 106

Query: 88  DSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI 147
           +                      +   +   +     + ++H D++  N L+S +    I
Sbjct: 107 E----------------------VLDMILEEVAKFYHRGIVHGDLSQYNVLVSEEGIWII 144

Query: 148 SLSGLSKDTYQKEYYKYRWVICSNIAE 174
                S +  ++ + +       NI  
Sbjct: 145 DF-PQSVEVGEEGWREILERDVRNIIT 170

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	183
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.98
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.98
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.98
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.98
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.97
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.97
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.92
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.86
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.66
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	98.35
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.11
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.21
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.77
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.11

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-41  Score=248.01  Aligned_cols=164  Identities=21%  Similarity=0.238  Sum_probs=141.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||+|.+..+++.||+|++.........+.+.+|+++++.++||||+++++++.+++..+++|||+++|+|.++
T Consensus        14 G~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~   93 (271)
T d1nvra_          14 GEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR   93 (271)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGG
T ss_pred             ecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHH
Confidence            44568899999999999999999998655555556789999999999999999999999999999999999999999998


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +....               .+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|+....   
T Consensus        94 l~~~~---------------~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~  158 (271)
T d1nvra_          94 IEPDI---------------GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR  158 (271)
T ss_dssp             SBTTT---------------BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred             HhcCC---------------CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCc
Confidence            86543               589999999999999999999999999999999999999999999999999985432   


Q ss_pred             ----ccccceeeeeecccCCCccccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                          ....||+.|+|||++.+.+|+.
T Consensus       159 ~~~~~~~~GT~~Y~APE~~~~~~~~~  184 (271)
T d1nvra_         159 ERLLNKMCGTLPYVAPELLKRREFHA  184 (271)
T ss_dssp             ECCBCCCCSCGGGSCTHHHHCSSBCH
T ss_pred             cccccceeeCcCccCHhHhcCCCCCC
Confidence                2456899999999998877654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-41  Score=249.61  Aligned_cols=164  Identities=17%  Similarity=0.225  Sum_probs=146.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||+|.+..+|+.||+|++.........+++.+|+.+++.++||||++++++|.+++..+++|||+++|+|.++
T Consensus        15 G~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~   94 (322)
T d1s9ja_          15 GAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQV   94 (322)
T ss_dssp             ECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHH
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHH
Confidence            55688999999999999999999998655555567899999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      +...+               .+++..++.++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+|.....  
T Consensus        95 l~~~~---------------~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~  159 (322)
T d1s9ja_          95 LKKAG---------------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM  159 (322)
T ss_dssp             HHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT
T ss_pred             HhhcC---------------CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc
Confidence            98764               48999999999999999999997 5999999999999999999999999999985432  


Q ss_pred             -ccccceeeeeecccCCCccccc
Q psy2674         159 -KEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                       ....||++|+|||++.|.+|+.
T Consensus       160 ~~~~~GT~~Y~APEvl~~~~y~~  182 (322)
T d1s9ja_         160 ANSFVGTRSYMSPERLQGTHYSV  182 (322)
T ss_dssp             C---CCSSCCCCHHHHHCSCCCT
T ss_pred             cccccCCccccCchHHcCCCCCc
Confidence             3578899999999999988863

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-40  Score=241.44  Aligned_cols=163  Identities=16%  Similarity=0.228  Sum_probs=144.3

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      +|--.+|.||+|.+..+|+.||+|++...... ..+.+.+|+++++.++||||+++++++.+++..+++|||+++|+|.+
T Consensus        28 iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~  106 (293)
T d1yhwa1          28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD  106 (293)
T ss_dssp             CCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHH
T ss_pred             EecCcCcEEEEEEECCCCCEEEEEEEecccCh-HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHH
Confidence            36678899999999999999999998743322 23578999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      ++...                .+++..++.++.|++.||.|||++|++||||||+|||++.++.+||+|||+|+....  
T Consensus       107 ~~~~~----------------~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~  170 (293)
T d1yhwa1         107 VVTET----------------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (293)
T ss_dssp             HHHHS----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             Hhhcc----------------CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeecccc
Confidence            87653                589999999999999999999999999999999999999999999999999985533  


Q ss_pred             ---ccccceeeeeecccCCCccccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                         ....||+.|+|||++.+.+|+.
T Consensus       171 ~~~~~~~gt~~Y~aPE~~~~~~~~~  195 (293)
T d1yhwa1         171 SKRSTMVGTPYWMAPEVVTRKAYGP  195 (293)
T ss_dssp             CCBCCCCSCGGGCCHHHHSSSCBCT
T ss_pred             ccccccccCCCccChhhhcCCCCCc
Confidence               2456899999999999988753

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-40  Score=240.71  Aligned_cols=163  Identities=23%  Similarity=0.311  Sum_probs=144.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--++|+||+|.+..+++.||+|++....  +....+.+.+|+++++.++||||+++++++.+++..+++|||+++|+|.
T Consensus        15 G~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~   94 (263)
T d2j4za1          15 GKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY   94 (263)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred             ecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHH
Confidence            45578999999999999999999986321  1223457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++....               .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+|......
T Consensus        95 ~~l~~~~---------------~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1          95 RELQKLS---------------KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             HHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred             HHHhhcC---------------CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCC
Confidence            9998764               4899999999999999999999999999999999999999999999999999865443


Q ss_pred             ---cccceeeeeecccCCCcccc
Q psy2674         160 ---EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ---~~~~~~~~~~pe~~~~~~~~  179 (183)
                         ...||+.|+|||++.+.+|+
T Consensus       160 ~~~~~~Gt~~Y~APE~~~~~~~~  182 (263)
T d2j4za1         160 RRTTLCGTLDYLPPEMIEGRMHD  182 (263)
T ss_dssp             CCEETTEEGGGCCHHHHTTCCCC
T ss_pred             cccccCCCCcccCHHHHcCCCCC
Confidence               45789999999999998885

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.5e-39  Score=240.59  Aligned_cols=165  Identities=18%  Similarity=0.242  Sum_probs=130.9

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      +|--++|.||+|.+..+++.||+|++...........+.+|+.+++.++||||+++++++.+++.++++|||++|++|.+
T Consensus        17 lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~   96 (307)
T d1a06a_          17 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD   96 (307)
T ss_dssp             SBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred             EeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHH
Confidence            36667899999999999999999999855444445578899999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec---cCCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~---~~~~~ki~dfg~a~~~~  157 (183)
                      ++...+               .+++..+..++.|++.||.|||+++++||||||+||++.   .++.+||+|||+|....
T Consensus        97 ~l~~~~---------------~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~  161 (307)
T d1a06a_          97 RIVEKG---------------FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMED  161 (307)
T ss_dssp             HHHTCS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC-------
T ss_pred             hhhccc---------------CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEcc
Confidence            997653               599999999999999999999999999999999999994   57899999999998654


Q ss_pred             cc----cccceeeeeecccCCCccccc
Q psy2674         158 QK----EYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       158 ~~----~~~~~~~~~~pe~~~~~~~~~  180 (183)
                      .+    ...||+.|+|||++.+.+|+.
T Consensus       162 ~~~~~~~~~GT~~y~APE~~~~~~~~~  188 (307)
T d1a06a_         162 PGSVLSTACGTPGYVAPEVLAQKPYSK  188 (307)
T ss_dssp             -----------CTTSCHHHHTTCCCCT
T ss_pred             CCCeeeeeeeCccccCcHHHcCCCCCc
Confidence            43    456899999999999988853

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.9e-39  Score=238.46  Aligned_cols=160  Identities=17%  Similarity=0.220  Sum_probs=141.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--++|.||+|.+..+++.||+|++....  +....+.+.+|+++++.++||||+++++++.+++..+++|||+++++|.
T Consensus        24 G~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~  103 (309)
T d1u5ra_          24 GHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD  103 (309)
T ss_dssp             EECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHH
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchH
Confidence            55678999999999999999999987433  3455668899999999999999999999999999999999999988887


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      .++....               .+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||+|..... 
T Consensus       104 ~~~~~~~---------------~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~  168 (309)
T d1u5ra_         104 LLEVHKK---------------PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA  168 (309)
T ss_dssp             HHHHHTS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred             HHHHhCC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCC
Confidence            6665543               589999999999999999999999999999999999999999999999999986544 


Q ss_pred             ccccceeeeeecccCCCc
Q psy2674         159 KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 ~~~~~~~~~~~pe~~~~~  176 (183)
                      ....||+.|+|||++.+.
T Consensus       169 ~~~~GT~~Y~APE~~~~~  186 (309)
T d1u5ra_         169 NSFVGTPYWMAPEVILAM  186 (309)
T ss_dssp             CCCCSCGGGCCHHHHTTT
T ss_pred             CccccCccccCHHHHhcc
Confidence            467889999999998653

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-39  Score=241.80  Aligned_cols=164  Identities=15%  Similarity=0.188  Sum_probs=145.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--++|+||+|.+..+++.||+|++.+..  +....+.+.+|+.+++.++||||+++++++.+++.++++|||+++|+|.
T Consensus        14 G~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~   93 (337)
T d1o6la_          14 GKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELF   93 (337)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred             ecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchh
Confidence            45678999999999999999999986321  1223457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++....               .+++..++.++.|++.||+|||++|++||||||+|||++.++.+||+|||+|+.... 
T Consensus        94 ~~~~~~~---------------~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~  158 (337)
T d1o6la_          94 FHLSRER---------------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             HHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             hhhhccc---------------CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccC
Confidence            9998764               489999999999999999999999999999999999999999999999999986533 


Q ss_pred             ----ccccceeeeeecccCCCccccc
Q psy2674         159 ----KEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       159 ----~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                          ...+||++|+|||++.+.+|+.
T Consensus       159 ~~~~~~~~GT~~Y~aPE~~~~~~y~~  184 (337)
T d1o6la_         159 GATMKTFCGTPEYLAPEVLEDNDYGR  184 (337)
T ss_dssp             TCCBCCCEECGGGCCGGGGSSSCBCT
T ss_pred             CcccccceeCHHHhhhhhccCCCCCh
Confidence                2467899999999999988853

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-39  Score=234.75  Aligned_cols=167  Identities=19%  Similarity=0.299  Sum_probs=135.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--CCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRD--GDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L   78 (183)
                      |--++|.||++.+..+|+.||+|.+... .++...+.+.+|+++++.++||||+++++++.+  ++.+|++|||+++|+|
T Consensus        13 G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L   92 (269)
T d2java1          13 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDL   92 (269)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEH
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcH
Confidence            4567889999999999999999999744 356667789999999999999999999999975  4568999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----ceecccccceeEeccCCceEEecccCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR-----LIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~-----ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      .+++....+           ....+++..++.++.|++.||.|||+.+     |+||||||+|||++.++.+||+|||+|
T Consensus        93 ~~~i~~~~~-----------~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a  161 (269)
T d2java1          93 ASVITKGTK-----------ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA  161 (269)
T ss_dssp             HHHHHHHHH-----------HTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHH
T ss_pred             HHHHHhccc-----------cCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccce
Confidence            999876432           1125899999999999999999999865     999999999999999999999999999


Q ss_pred             CCCCc-----ccccceeeeeecccCCCcccc
Q psy2674         154 KDTYQ-----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~-----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +....     ....+|+.|+|||++.+.+|+
T Consensus       162 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~  192 (269)
T d2java1         162 RILNHDTSFAKAFVGTPYYMSPEQMNRMSYN  192 (269)
T ss_dssp             HHC-----------CCCSCCCHHHHTTCCCC
T ss_pred             eecccCCCccccCCCCcccCCHHHHcCCCCC
Confidence            85543     246779999999999988775

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-38  Score=229.77  Aligned_cols=160  Identities=20%  Similarity=0.225  Sum_probs=139.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec----CCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRD----GDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~   76 (183)
                      |--++|.||+|.+..++..||+|.+... ......+.+.+|+++++.++||||+++++++.+    +..++++|||++++
T Consensus        18 G~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g   97 (270)
T d1t4ha_          18 GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSG   97 (270)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSC
T ss_pred             ecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCC
Confidence            5567899999999999999999998743 356667789999999999999999999999875    34578999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--ceecccccceeEec-cCCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKR--LIHKDIAARNCLIS-SDLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~--ivH~di~~~nil~~-~~~~~ki~dfg~a  153 (183)
                      +|.+++....               .+++..++.++.|++.||.|||+++  |+||||||+|||++ .++.+||+|||+|
T Consensus        98 ~L~~~l~~~~---------------~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla  162 (270)
T d1t4ha_          98 TLKTYLKRFK---------------VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA  162 (270)
T ss_dssp             BHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGG
T ss_pred             cHHHHHhccc---------------cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcc
Confidence            9999998764               4899999999999999999999998  99999999999996 5789999999999


Q ss_pred             CCCCc---ccccceeeeeecccCCCc
Q psy2674         154 KDTYQ---KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       154 ~~~~~---~~~~~~~~~~~pe~~~~~  176 (183)
                      +....   ....||+.|+|||++.++
T Consensus       163 ~~~~~~~~~~~~GT~~Y~aPE~~~~~  188 (270)
T d1t4ha_         163 TLKRASFAKAVIGTPEFMAPEMYEEK  188 (270)
T ss_dssp             GGCCTTSBEESCSSCCCCCGGGGGTC
T ss_pred             eeccCCccCCcccCccccCHHHhCCC
Confidence            85433   356789999999998764

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-39  Score=236.42  Aligned_cols=158  Identities=20%  Similarity=0.344  Sum_probs=140.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||+|.+..++..||+|++...... ..+.+.+|+++++.++||||+++++++.+++..+++|||+++|+|.++
T Consensus        21 G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~   99 (288)
T d2jfla1          21 GDGAFGKVYKAQNKETSVLAAAKVIDTKSEE-ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV   99 (288)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECSSSG-GGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHH
T ss_pred             eeCCCcEEEEEEECCCCeEEEEEEECcCCHH-HHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHH
Confidence            4457889999999999999999998754333 345789999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc---
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ---  158 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~---  158 (183)
                      +.....              .+++..+..++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|.....   
T Consensus       100 ~~~~~~--------------~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~  165 (288)
T d2jfla1         100 MLELER--------------PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ  165 (288)
T ss_dssp             HHHHTS--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcc
Confidence            876543              589999999999999999999999999999999999999999999999999975543   


Q ss_pred             --ccccceeeeeecccCC
Q psy2674         159 --KEYYKYRWVICSNIAE  174 (183)
Q Consensus       159 --~~~~~~~~~~~pe~~~  174 (183)
                        ....||+.|+|||++.
T Consensus       166 ~~~~~~Gt~~y~APE~l~  183 (288)
T d2jfla1         166 RRDSFIGTPYWMAPEVVM  183 (288)
T ss_dssp             HHTCCCSCCTTCCHHHHT
T ss_pred             cccccccccccCCHHHHh
Confidence              2567899999999984

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-39  Score=237.39  Aligned_cols=163  Identities=18%  Similarity=0.264  Sum_probs=142.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--.+|+||+|.+..+++.||+|++....  .....+.+.+|+++++.++||||+++++++.+++..|++|||+++|+|.
T Consensus        17 G~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~   96 (288)
T d1uu3a_          17 GEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELL   96 (288)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHH
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHH
Confidence            44578899999999999999999986321  1223457899999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +++...+               .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+|+.... 
T Consensus        97 ~~~~~~~---------------~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_          97 KYIRKIG---------------SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  161 (288)
T ss_dssp             HHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             HhhhccC---------------CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccC
Confidence            9988764               499999999999999999999999999999999999999999999999999985532 


Q ss_pred             ------ccccceeeeeecccCCCcccc
Q psy2674         159 ------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                            ....||+.|+|||++.+.+|+
T Consensus       162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~  188 (288)
T d1uu3a_         162 SKQARANSFVGTAQYVSPELLTEKSAC  188 (288)
T ss_dssp             --------CCCCGGGCCHHHHHTCCCC
T ss_pred             CcccccccccCCccccCceeeccCCCC
Confidence                  235689999999999988874

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.6e-38  Score=231.96  Aligned_cols=164  Identities=21%  Similarity=0.357  Sum_probs=143.2

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      +|--++|.||+|.+..+++.||+|++......  .+++.+|+++++.++||||+++++++.+++..+++|||+++|+|.+
T Consensus        25 iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~--~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~  102 (287)
T d1opja_          25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME--VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD  102 (287)
T ss_dssp             TTTTTTSSEEEEEEGGGTEEEEEEECCTTCSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHH
T ss_pred             EeeCCCeEEEEEEECCCCeEEEEEEECCccch--HHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHH
Confidence            46678899999999999999999998744332  3478999999999999999999999999999999999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCccc
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQKE  160 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~~  160 (183)
                      ++.....             ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+....+.
T Consensus       103 ~l~~~~~-------------~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~  169 (287)
T d1opja_         103 YLRECNR-------------QEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  169 (287)
T ss_dssp             HHHHSCT-------------TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS
T ss_pred             Hhhhccc-------------cchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCC
Confidence            9876532             258999999999999999999999999999999999999999999999999998665432


Q ss_pred             ------ccceeeeeecccCCCcccc
Q psy2674         161 ------YYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       161 ------~~~~~~~~~pe~~~~~~~~  179 (183)
                            ..++..|+|||++.+.+|+
T Consensus       170 ~~~~~~~~g~~~y~aPE~~~~~~~~  194 (287)
T d1opja_         170 YTAHAGAKFPIKWTAPESLAYNKFS  194 (287)
T ss_dssp             SEEETTEEECGGGCCHHHHHHCCCS
T ss_pred             ceeeccccccccccChHHHcCCCCC
Confidence                  2346789999999887765

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.1e-38  Score=236.87  Aligned_cols=164  Identities=18%  Similarity=0.234  Sum_probs=144.8

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--++|.||+|.+..+|+.||+|++....  .....+.+.+|+.+++.++||||+++++++.+++..+++|||++|++|.
T Consensus        13 G~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~   92 (316)
T d1fota_          13 GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELF   92 (316)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             ecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCcccc
Confidence            45578899999999999999999986321  1223457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      ..+....               .+++..++.++.|++.|+.|||+++|+||||||+|||++.++.+||+|||+|+.....
T Consensus        93 ~~~~~~~---------------~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_          93 SLLRKSQ---------------RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             HHHHHTS---------------SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             ccccccc---------------cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccc
Confidence            9888764               4888999999999999999999999999999999999999999999999999865443


Q ss_pred             --cccceeeeeecccCCCccccc
Q psy2674         160 --EYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       160 --~~~~~~~~~~pe~~~~~~~~~  180 (183)
                        ...||+.|+|||++.+++|+.
T Consensus       158 ~~~~~Gt~~Y~APE~l~~~~y~~  180 (316)
T d1fota_         158 TYTLCGTPDYIAPEVVSTKPYNK  180 (316)
T ss_dssp             BCCCCSCTTTCCHHHHTTCCBCT
T ss_pred             cccccCcccccCHHHHcCCCCCc
Confidence              567899999999999988863

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=2.8e-38  Score=237.48  Aligned_cols=163  Identities=18%  Similarity=0.251  Sum_probs=143.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||+|.+..+|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+++.++++|||+++|+|.++
T Consensus        35 G~G~fg~Vy~~~~~~~g~~vAvK~i~~~~-~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~  113 (350)
T d1koaa2          35 GTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEK  113 (350)
T ss_dssp             EEETTEEEEEEEETTTTEEEEEEEECCCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHH
T ss_pred             ecCcCeEEEEEEECCCCCEEEEEEEcccc-hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHH
Confidence            44578899999999999999999997543 44566889999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec--cCCceEEecccCCCCCCcc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS--SDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~--~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.....              .+++..++.++.||+.||.|||++|++||||||+|||++  .++.+||+|||+|......
T Consensus       114 l~~~~~--------------~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~  179 (350)
T d1koaa2         114 VADEHN--------------KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK  179 (350)
T ss_dssp             HTCTTS--------------CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTT
T ss_pred             HHhhcC--------------CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccc
Confidence            854422              589999999999999999999999999999999999995  4688999999999865543


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...+|++|+|||++.+.+|+
T Consensus       180 ~~~~~~~gT~~Y~aPEv~~~~~~~  203 (350)
T d1koaa2         180 QSVKVTTGTAEFAAPEVAEGKPVG  203 (350)
T ss_dssp             SCEEEECSCTTTCCHHHHHTCCBC
T ss_pred             cccceecCcccccCHHHHcCCCCC
Confidence                46779999999999998875

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.5e-38  Score=231.48  Aligned_cols=164  Identities=21%  Similarity=0.290  Sum_probs=134.2

Q ss_pred             CCCCCceeeeccCCCCcc---eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTS---VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-.+|.||++....+++   .||+|.+.........+.+.+|+++++.++||||+++++++.+++..+++|||+++|+|
T Consensus        35 G~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L  114 (299)
T d1jpaa_          35 GAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL  114 (299)
T ss_dssp             EECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEH
T ss_pred             eeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcc
Confidence            456788999998776654   68999988777777778899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+|+....
T Consensus       115 ~~~~~~~~~--------------~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~  180 (299)
T d1jpaa_         115 DSFLRQNDG--------------QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLED  180 (299)
T ss_dssp             HHHHHTTTT--------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC--------
T ss_pred             eeeeccccC--------------CCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccC
Confidence            998876532              589999999999999999999999999999999999999999999999999986543


Q ss_pred             c----------cccceeeeeecccCCCcccc
Q psy2674         159 K----------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ~----------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .          ...+|+.|+|||++.+..|+
T Consensus       181 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  211 (299)
T d1jpaa_         181 DTSDPTYTSALGGKIPIRWTAPEAIQYRKFT  211 (299)
T ss_dssp             ---------------CGGGSCHHHHHSCCCC
T ss_pred             CCCcceeeecccccCCccccCHHHHhcCCCC
Confidence            2          23457789999999887764

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=3.4e-38  Score=237.12  Aligned_cols=163  Identities=19%  Similarity=0.216  Sum_probs=143.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||+|.+..+|+.||+|++.... ......+.+|+.+++.++||||+++++++.+++.++++|||+++|+|.+.
T Consensus        38 G~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~  116 (352)
T d1koba_          38 GSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDR  116 (352)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHH
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEECCcc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHH
Confidence            44578999999999999999999987543 33456788999999999999999999999999999999999999999887


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec--cCCceEEecccCCCCCCcc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS--SDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~--~~~~~ki~dfg~a~~~~~~  159 (183)
                      +.....              .+++..++.++.||+.||.|||++||+||||||+|||++  ..+.+||+|||+|.....+
T Consensus       117 ~~~~~~--------------~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~  182 (352)
T d1koba_         117 IAAEDY--------------KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD  182 (352)
T ss_dssp             TTCTTC--------------CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCC
Confidence            755432              589999999999999999999999999999999999997  5789999999999876544


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...+|+.|+|||++.+.+|+
T Consensus       183 ~~~~~~~gt~~y~aPE~~~~~~~~  206 (352)
T d1koba_         183 EIVKVTTATAEFAAPEIVDREPVG  206 (352)
T ss_dssp             SCEEEECSSGGGCCHHHHTTCCBC
T ss_pred             CceeeccCcccccCHHHHcCCCCC
Confidence                35678999999999998875

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.6e-38  Score=235.87  Aligned_cols=163  Identities=18%  Similarity=0.186  Sum_probs=145.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |--++|.||+|.+..+|+.||+|++....  +....+.+.+|+++++.++||||+++++++.+....++++||+.+|+|.
T Consensus        50 G~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~  129 (350)
T d1rdqe_          50 GTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF  129 (350)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred             ecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchh
Confidence            55678999999999999999999986321  1223457889999999999999999999999999999999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc-
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ-  158 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~-  158 (183)
                      +.+...+               .+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+.... 
T Consensus       130 ~~l~~~~---------------~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         130 SHLRRIG---------------RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             HHHHHHC---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             hhHhhcC---------------CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence            9998764               489999999999999999999999999999999999999999999999999986644 


Q ss_pred             -ccccceeeeeecccCCCcccc
Q psy2674         159 -KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 -~~~~~~~~~~~pe~~~~~~~~  179 (183)
                       ....||+.|+|||++.+++|+
T Consensus       195 ~~~~~Gt~~Y~APE~~~~~~~~  216 (350)
T d1rdqe_         195 TWTLCGTPEALAPEIILSKGYN  216 (350)
T ss_dssp             BCCCEECGGGCCHHHHTTCCBC
T ss_pred             cccccCccccCCHHHHcCCCCC
Confidence             356789999999999998875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-37  Score=227.64  Aligned_cols=163  Identities=18%  Similarity=0.222  Sum_probs=142.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-----CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-----DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--++|.||+|.+..+|+.||+|++....     .....+.+.+|+++++.++||||+++++++.+++..+++|||+++|
T Consensus        19 G~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg   98 (293)
T d1jksa_          19 GSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGG   98 (293)
T ss_dssp             EECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSC
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCc
Confidence            55678999999999999999999986332     1223567899999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCC----ceEEecccC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDL----SVKISLSGL  152 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~----~~ki~dfg~  152 (183)
                      +|.+++...+               .+++..++.++.|++.||.|||+++++||||||+||+++.++    .+|++|||+
T Consensus        99 ~L~~~i~~~~---------------~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~  163 (293)
T d1jksa_          99 ELFDFLAEKE---------------SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  163 (293)
T ss_dssp             BHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             cccchhcccc---------------ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhh
Confidence            9999998764               499999999999999999999999999999999999998665    599999999


Q ss_pred             CCCCCcc----cccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      |......    ...+++.|+|||++.+..|+
T Consensus       164 a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~  194 (293)
T d1jksa_         164 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLG  194 (293)
T ss_dssp             CEECTTSCBCSCCCCCGGGCCHHHHTTCCBC
T ss_pred             hhhcCCCccccccCCCCcccCHHHHcCCCCC
Confidence            9865432    45678899999999887764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-37  Score=226.36  Aligned_cols=163  Identities=23%  Similarity=0.330  Sum_probs=139.1

Q ss_pred             CCCCCceeeeccC--CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHH
Q psy2674           2 SLIPNARGLKASD--PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLK   79 (183)
Q Consensus         2 ~~~~~~~~~~~~~--~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   79 (183)
                      |.-.+|.||++..  ..++..||||++....+....+++.+|+++++.++||||+++++++.+ +.++++|||+++|+|.
T Consensus        18 G~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~   96 (285)
T d1u59a_          18 GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLH   96 (285)
T ss_dssp             ECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHH
T ss_pred             ecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHH
Confidence            5667889999854  445678999999877777778899999999999999999999999875 5689999999999999


Q ss_pred             HHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc
Q psy2674          80 QFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~  159 (183)
                      +++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+|+.....
T Consensus        97 ~~l~~~~~--------------~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_          97 KFLVGKRE--------------EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD  162 (285)
T ss_dssp             HHHTTCTT--------------TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred             HHhhcccc--------------CCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhccccc
Confidence            98755432              5899999999999999999999999999999999999999999999999999855432


Q ss_pred             --------cccceeeeeecccCCCcccc
Q psy2674         160 --------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 --------~~~~~~~~~~pe~~~~~~~~  179 (183)
                              ...+|..|+|||++.+.+|+
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~  190 (285)
T d1u59a_         163 DSYYTARSAGKWPLKWYAPECINFRKFS  190 (285)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEEC
T ss_pred             ccccccccccccCccccChHHHhCCCCC
Confidence                    23457789999998876664

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-37  Score=223.12  Aligned_cols=161  Identities=20%  Similarity=0.306  Sum_probs=132.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--.+|.||++... ++..||||++......  .+.+.+|+++++.++||||+++++++.+++..+++|||+++|+|.++
T Consensus        14 G~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~   90 (263)
T d1sm2a_          14 GSGQFGLVHLGYWL-NKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDY   90 (263)
T ss_dssp             ECCSSCCEEEEEET-TTEEEEEEECCSSSSC--HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHH
T ss_pred             eeCCCeEEEEEEEC-CCCEEEEEEECCCcCc--HHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHH
Confidence            45677889988765 5678999998754332  24789999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..++.++.|++.|+.|||+++++||||||+||+++.++.+||+|||+|+.....  
T Consensus        91 l~~~~~--------------~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~  156 (263)
T d1sm2a_          91 LRTQRG--------------LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY  156 (263)
T ss_dssp             HHTTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC----------
T ss_pred             hhcccc--------------CCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCc
Confidence            876532              5889999999999999999999999999999999999999999999999999865432  


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...+|..|+|||++.+..|+
T Consensus       157 ~~~~~~~gt~~y~aPE~l~~~~~~  180 (263)
T d1sm2a_         157 TSSTGTKFPVKWASPEVFSFSRYS  180 (263)
T ss_dssp             --------CTTSCCHHHHTTCCCC
T ss_pred             eeecceecCcccCChHHhcCCCCC
Confidence                24567889999999988774

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-37  Score=223.41  Aligned_cols=157  Identities=18%  Similarity=0.252  Sum_probs=131.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC-CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH-SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--.+|.||++...   ..||||++.. ..+....+.+.+|+.+++.++||||+++++++. ++..+++|||+++|+|.+
T Consensus        17 G~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~~   92 (276)
T d1uwha_          17 GSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYH   92 (276)
T ss_dssp             EECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCEEEHHH
T ss_pred             eeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEecCCCCCHHH
Confidence            45577889988643   3599999873 334556678999999999999999999999875 457899999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      ++.....              .+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|+....  
T Consensus        93 ~l~~~~~--------------~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~  158 (276)
T d1uwha_          93 HLHIIET--------------KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWS  158 (276)
T ss_dssp             HHHTSCC--------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC-----
T ss_pred             HHhhccC--------------CCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccC
Confidence            9976532              589999999999999999999999999999999999999999999999999975432  


Q ss_pred             -----ccccceeeeeecccCCCc
Q psy2674         159 -----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~  176 (183)
                           ....+|+.|+|||++.+.
T Consensus       159 ~~~~~~~~~gt~~y~APE~l~~~  181 (276)
T d1uwha_         159 GSHQFEQLSGSILWMAPEVIRMQ  181 (276)
T ss_dssp             -------CCCCGGGCCHHHHTTC
T ss_pred             CcccccccccCcccCCHHHHhcc
Confidence                 234678999999998754

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-37  Score=223.55  Aligned_cols=162  Identities=23%  Similarity=0.317  Sum_probs=135.5

Q ss_pred             CCCCCceeeecc--CCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKAS--DPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~--~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--++|.||++.  ...+++.||+|++... .++...+.+.+|+++++.++||||+++++++.+ +..+++|||+++|+|
T Consensus        16 G~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L   94 (277)
T d1xbba_          16 GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPL   94 (277)
T ss_dssp             EECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTEEH
T ss_pred             ccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCCcH
Confidence            456788899986  4456789999999743 344556789999999999999999999999965 467899999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.||.|||+++++||||||+|||++.++.+|++|||+|+....
T Consensus        95 ~~~l~~~~---------------~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~  159 (277)
T d1xbba_          95 NKYLQQNR---------------HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA  159 (277)
T ss_dssp             HHHHHHCT---------------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred             HHHHhhcc---------------CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccc
Confidence            99987653               489999999999999999999999999999999999999999999999999985433


Q ss_pred             c--------cccceeeeeecccCCCcccc
Q psy2674         159 K--------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ~--------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .        ...+|+.|+|||++.+.+|+
T Consensus       160 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~  188 (277)
T d1xbba_         160 DENYYKAQTHGKWPVKWYAPECINYYKFS  188 (277)
T ss_dssp             TCSEEEC----CCCGGGCCHHHHHHCEEE
T ss_pred             cccccccccccCCCceecCchhhcCCCCC
Confidence            2        23467889999998876663

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.1e-36  Score=222.07  Aligned_cols=159  Identities=14%  Similarity=0.217  Sum_probs=140.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC--------HHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD--------DEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~   72 (183)
                      |--.+|+||+|++..+++.||+|++.....        ....+.+.+|+.+++.++ ||||+++++++.+++.+|++|||
T Consensus        12 G~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~   91 (277)
T d1phka_          12 GRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDL   91 (277)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEc
Confidence            445688999999999999999999874321        223457889999999996 99999999999999999999999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      +++++|.+++...+               .+++..++.++.||+.||+|||+++++||||||+||+++.++.+||+|||+
T Consensus        92 ~~~g~L~~~l~~~~---------------~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~  156 (277)
T d1phka_          92 MKKGELFDYLTEKV---------------TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGF  156 (277)
T ss_dssp             CTTCBHHHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             CCCchHHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchh
Confidence            99999999998764               499999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCc----ccccceeeeeecccCCC
Q psy2674         153 SKDTYQ----KEYYKYRWVICSNIAEG  175 (183)
Q Consensus       153 a~~~~~----~~~~~~~~~~~pe~~~~  175 (183)
                      |.....    ....+|+.|+|||++.+
T Consensus       157 a~~~~~~~~~~~~~gt~~y~~PE~~~~  183 (277)
T d1phka_         157 SCQLDPGEKLREVCGTPSYLAPEIIEC  183 (277)
T ss_dssp             CEECCTTCCBCCCCSCGGGCCHHHHHH
T ss_pred             eeEccCCCceeeeeccCCCCCHHHhhc
Confidence            986543    34667899999999864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-36  Score=222.43  Aligned_cols=164  Identities=21%  Similarity=0.279  Sum_probs=136.4

Q ss_pred             CCCCCceeeeccCCCCc----ceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDT----SVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |--++|.||+|....++    .+||||.+...........+.+|+++++.++||||+++++++.+++..++++||+.+++
T Consensus        16 G~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~   95 (283)
T d1mqba_          16 GAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA   95 (283)
T ss_dssp             EECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEE
T ss_pred             eeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCc
Confidence            44577888888765443    57999999877777777789999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      +.+.+.....              .+++..++.++.|++.|+.|||+++++||||||+|||++.++.+||+|||+|+...
T Consensus        96 l~~~~~~~~~--------------~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~  161 (283)
T d1mqba_          96 LDKFLREKDG--------------EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLE  161 (283)
T ss_dssp             HHHHHHHTTT--------------CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred             chhhhhcccc--------------cccHHHHHHHHHHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhccc
Confidence            9988876543              58999999999999999999999999999999999999999999999999998643


Q ss_pred             cc--------cccceeeeeecccCCCcccc
Q psy2674         158 QK--------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~--------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..        ...+|..|+|||++.+..|+
T Consensus       162 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~  191 (283)
T d1mqba_         162 DDPEATYTTSGGKIPIRWTAPEAISYRKFT  191 (283)
T ss_dssp             ------------CCCGGGSCHHHHHSCCCC
T ss_pred             CCCccceEeccCCCCccccCHHHHccCCCC
Confidence            32        23457889999999887764

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.4e-36  Score=220.55  Aligned_cols=164  Identities=18%  Similarity=0.263  Sum_probs=138.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccC--CCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCc----cEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVH--SKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDP----HYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----~~lv~e~~~~   75 (183)
                      |--++|.||+|.+..+++.||+|++..  ..+....+.+.+|+++++.++||||+++++++.+++.    .|++|||++|
T Consensus        16 G~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g   95 (277)
T d1o6ya_          16 GFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDG   95 (277)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCE
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCC
Confidence            456789999999999999999999974  3356667789999999999999999999999986543    7899999999


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKD  155 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~  155 (183)
                      ++|.+.+...+               .+++..++.++.|++.|+.|||++|++||||||+|||++.++..+++|||.+..
T Consensus        96 ~~L~~~~~~~~---------------~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~  160 (277)
T d1o6ya_          96 VTLRDIVHTEG---------------PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARA  160 (277)
T ss_dssp             EEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEE
T ss_pred             CEehhhhcccC---------------CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhh
Confidence            99999887764               489999999999999999999999999999999999999999999999998764


Q ss_pred             CCc--------ccccceeeeeecccCCCccccc
Q psy2674         156 TYQ--------KEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       156 ~~~--------~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                      ...        ....||+.|+|||++.+.+|++
T Consensus       161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~  193 (277)
T d1o6ya_         161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDA  193 (277)
T ss_dssp             CC----------------TTCCHHHHTTCCCCH
T ss_pred             hccccccccccccccCcccccCHHHHcCCCCCc
Confidence            322        2456899999999999887753

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=3.8e-36  Score=226.89  Aligned_cols=163  Identities=18%  Similarity=0.185  Sum_probs=138.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-----CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-----KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--++|.||+|.+..+|+.||+|++...     ..........+|+.+++.++||||+++++++.+++..+++|||+++|
T Consensus        13 G~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg   92 (364)
T d1omwa3          13 GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGG   92 (364)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCC
Confidence            5567899999999999999999998632     12222223344577788889999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++....               .+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+|...
T Consensus        93 ~L~~~l~~~~---------------~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~  157 (364)
T d1omwa3          93 DLHYHLSQHG---------------VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDF  157 (364)
T ss_dssp             BHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred             cHHHHHHhcc---------------cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeec
Confidence            9999998764               4889999999999999999999999999999999999999999999999999865


Q ss_pred             Cc---ccccceeeeeecccCC-Ccccc
Q psy2674         157 YQ---KEYYKYRWVICSNIAE-GRRLN  179 (183)
Q Consensus       157 ~~---~~~~~~~~~~~pe~~~-~~~~~  179 (183)
                      ..   ....||+.|+|||++. +..|+
T Consensus       158 ~~~~~~~~~GT~~y~APE~~~~~~~~~  184 (364)
T d1omwa3         158 SKKKPHASVGTHGYMAPEVLQKGVAYD  184 (364)
T ss_dssp             SSSCCCSCCSCGGGCCHHHHSTTCCCC
T ss_pred             CCCcccccccccccchhHHhhcCCCCC
Confidence            44   3467899999999986 45554

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.7e-37  Score=225.17  Aligned_cols=160  Identities=18%  Similarity=0.209  Sum_probs=133.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCH----HHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDD----EALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |.-++|.||+|.+..+|+.||+|++......    .....+.+|+++++.++||||+++++++.+++..+++|||+.+++
T Consensus         7 G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~   86 (299)
T d1ua2a_           7 GEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDL   86 (299)
T ss_dssp             EEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEH
T ss_pred             ccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchH
Confidence            4557899999999999999999998743221    123468899999999999999999999999999999999999666


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      +.......               ..+++..+..++.|++.||+|||+++++||||||+|||++.++.+||+|||+|....
T Consensus        87 ~~~~~~~~---------------~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~  151 (299)
T d1ua2a_          87 EVIIKDNS---------------LVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG  151 (299)
T ss_dssp             HHHHTTCC---------------SSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred             Hhhhhhcc---------------cCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccC
Confidence            65554322               258889999999999999999999999999999999999999999999999997554


Q ss_pred             c-----ccccceeeeeecccCCCc
Q psy2674         158 Q-----KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       158 ~-----~~~~~~~~~~~pe~~~~~  176 (183)
                      .     ....+|++|+|||++.+.
T Consensus       152 ~~~~~~~~~~gt~~y~aPE~~~~~  175 (299)
T d1ua2a_         152 SPNRAYTHQVVTRWYRAPELLFGA  175 (299)
T ss_dssp             SCCCCCCCSCCCCTTCCHHHHTTC
T ss_pred             CCcccccceecChhhccHHHHccC
Confidence            3     245689999999998653

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-36  Score=224.71  Aligned_cols=164  Identities=19%  Similarity=0.267  Sum_probs=140.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--CHHHHHHHHHHHHHH-hcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--DDEALHEFKREIDLF-CKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l-~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |.-++|.||+|.+..+++.||+|++.+..  .....+.+.+|...+ +.++||||+++++++.+++..|++|||+++|+|
T Consensus        11 G~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L   90 (320)
T d1xjda_          11 GKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL   90 (320)
T ss_dssp             EECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             ecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcH
Confidence            45678999999999999999999986321  112233556666655 468999999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++....               .+++..++.++.|++.||.|||+++++||||||+|||++.++.+|++|||+|+....
T Consensus        91 ~~~i~~~~---------------~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~  155 (320)
T d1xjda_          91 MYHIQSCH---------------KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML  155 (320)
T ss_dssp             HHHHHHHS---------------SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred             HHHhhccC---------------CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhccc
Confidence            99998764               489999999999999999999999999999999999999999999999999985433


Q ss_pred             -----ccccceeeeeecccCCCccccc
Q psy2674         159 -----KEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       159 -----~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                           ....||+.|+|||++.+.+|+.
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~  182 (320)
T d1xjda_         156 GDAKTNTFCGTPDYIAPEILLGQKYNH  182 (320)
T ss_dssp             TTCCBCCCCSCGGGCCHHHHTTCCBCT
T ss_pred             ccccccccCCCCCcCCHHHHcCCCCCc
Confidence                 2457799999999999988863

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-36  Score=223.79  Aligned_cols=162  Identities=13%  Similarity=0.123  Sum_probs=141.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |.-++|.||+|.+..+++.||+|++.....  ....+.+|+++++.++||||+++++++.+++.+|++|||++|++|.++
T Consensus        14 G~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~--~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~   91 (321)
T d1tkia_          14 GRGEFGIVHRCVETSSKKTYMAKFVKVKGT--DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFER   91 (321)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECCCTH--HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHH
T ss_pred             ecCCCeEEEEEEECCCCcEEEEEEEcCCcc--cHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHH
Confidence            556789999999999999999999975432  234688999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc--CCceEEecccCCCCCCcc
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS--DLSVKISLSGLSKDTYQK  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~--~~~~ki~dfg~a~~~~~~  159 (183)
                      +...+.              .+++..++.++.|++.||+|||++||+||||||+|||++.  ...++|+|||++......
T Consensus        92 i~~~~~--------------~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~  157 (321)
T d1tkia_          92 INTSAF--------------ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG  157 (321)
T ss_dssp             HTSSSC--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT
T ss_pred             HHhcCC--------------CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccC
Confidence            965432              5899999999999999999999999999999999999974  458999999999866543


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ..++++.|+|||+..+..|+
T Consensus       158 ~~~~~~~~t~~y~ape~~~~~~~~  181 (321)
T d1tkia_         158 DNFRLLFTAPEYYAPEVHQHDVVS  181 (321)
T ss_dssp             CEEEEEESCGGGSCHHHHTTCEEC
T ss_pred             CcccccccccccccchhccCCCCC
Confidence                34668899999999988774

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-36  Score=225.62  Aligned_cols=178  Identities=24%  Similarity=0.346  Sum_probs=136.5

Q ss_pred             CCCCCceeeeccCCCC-----cceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQD-----TSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |--++|.||+|.....     ...||+|.+....+......+.+|+.++..+ +||||+++++++.+++..+++|||+++
T Consensus        46 G~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~  125 (325)
T d1rjba_          46 GSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY  125 (325)
T ss_dssp             EECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCC
Confidence            4456788888876443     3479999987665666667889999999998 899999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCC--------CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEE
Q psy2674          76 GDLKQFLLATRKDSKD--------KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI  147 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki  147 (183)
                      |+|.+++.........        ...........+++..++.++.|++.||.|||+++|+||||||+||+++.++.+||
T Consensus       126 g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl  205 (325)
T d1rjba_         126 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKI  205 (325)
T ss_dssp             CBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEE
T ss_pred             CcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEE
Confidence            9999999765321000        00001112235889999999999999999999999999999999999999999999


Q ss_pred             ecccCCCCCCcc-------cccceeeeeecccCCCcccc
Q psy2674         148 SLSGLSKDTYQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       148 ~dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +|||+|+.....       ...+|+.|+|||++.+..|+
T Consensus       206 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~  244 (325)
T d1rjba_         206 CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYT  244 (325)
T ss_dssp             CCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCC
T ss_pred             eeccccccccCCCceeeeccccCCCccCChHHHcCCCCC
Confidence            999999854432       23457889999998877764

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-36  Score=224.13  Aligned_cols=159  Identities=15%  Similarity=0.272  Sum_probs=136.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhc-CCCcceeeEEeEEec----CCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCK-LDHAHVVKMIGICRD----GDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~h~~i~~~~~~~~~----~~~~~lv~e~~~~~   76 (183)
                      |.-++|.||+|.+..+++.||+|++...      ..+.+|++++.. .+||||++++++|++    +..+|++||||+||
T Consensus        21 G~G~fg~Vy~a~~~~~~~~vAiK~i~~~------~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg   94 (335)
T d2ozaa1          21 GLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGG   94 (335)
T ss_dssp             EECSSCEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSE
T ss_pred             eeccCeEEEEEEECCCCCEEEEEEECCc------HHHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCC
Confidence            5567899999999999999999998632      257789988655 589999999999875    45689999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc---CCceEEecccCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS---DLSVKISLSGLS  153 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~---~~~~ki~dfg~a  153 (183)
                      +|.+++...+.             ..+++..++.++.|++.||.|||++|++||||||+|||++.   .+.+||+|||+|
T Consensus        95 ~L~~~i~~~~~-------------~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a  161 (335)
T d2ozaa1          95 ELFSRIQDRGD-------------QAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA  161 (335)
T ss_dssp             EHHHHHHSCSC-------------CCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             cHHHHHHhcCC-------------CCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccccccccccccee
Confidence            99999976432             25899999999999999999999999999999999999974   567999999999


Q ss_pred             CCCCc----ccccceeeeeecccCCCcccc
Q psy2674         154 KDTYQ----KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~----~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +....    ....||++|+|||++.+.+|+
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~  191 (335)
T d2ozaa1         162 KETTSHNSLTTPCYTPYYVAPEVLGPEKYD  191 (335)
T ss_dssp             EECCCCCCCCCCSCCCSSCCCCCCCGGGGS
T ss_pred             eeccCCCccccccCCcccCCcHHHcCCCCC
Confidence            85443    246789999999999998885

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-35  Score=214.25  Aligned_cols=161  Identities=22%  Similarity=0.298  Sum_probs=139.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--++|.||++.. .++.+||+|.+......  .+.+.+|+++++.++||||+++++++.+++.++++|||+++|+|.++
T Consensus        13 G~G~fg~Vy~~~~-~~~~~vAvK~l~~~~~~--~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~   89 (258)
T d1k2pa_          13 GTGQFGVVKYGKW-RGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY   89 (258)
T ss_dssp             CEETTEEEEEEEE-TTTEEEEEEEEESSSSC--HHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHH
T ss_pred             ecCCCeEEEEEEE-CCCCEEEEEEECcCcCC--HHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHh
Confidence            5567889999986 47889999999854433  24789999999999999999999999999999999999999999999


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....              .+++..++.++.|++.|+.|||++|++||||||+||+++.++.+||+|||+|......  
T Consensus        90 ~~~~~~--------------~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~  155 (258)
T d1k2pa_          90 LREMRH--------------RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY  155 (258)
T ss_dssp             HHSGGG--------------CCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSC
T ss_pred             hhcccc--------------CCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCc
Confidence            766543              5888999999999999999999999999999999999999999999999999755432  


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...+|..|+|||++.+..|+
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~~~~  179 (258)
T d1k2pa_         156 TSSVGSKFPVRWSPPEVLMYSKFS  179 (258)
T ss_dssp             CCCCCSCCCGGGCCHHHHHHCCCC
T ss_pred             eeecccCCCCCcCCcHHhcCCCCC
Confidence                24457889999999877664

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-36  Score=222.82  Aligned_cols=165  Identities=21%  Similarity=0.316  Sum_probs=137.0

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--.+|.||+|.+..+++.||+|++.... .....+++.+|+++++.++||||+++++++.+++.++++|||++ +++.+
T Consensus        11 G~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~-~~~~~   89 (298)
T d1gz8a_          11 GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKK   89 (298)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHH
T ss_pred             ecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecC-Cchhh
Confidence            45678999999999999999999997432 22335678999999999999999999999999999999999998 55555


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      .+.....             ..+++..++.++.|++.||+|||+++|+||||||+|||++.++.+||+|||+|+....  
T Consensus        90 ~~~~~~~-------------~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~  156 (298)
T d1gz8a_          90 FMDASAL-------------TGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV  156 (298)
T ss_dssp             HHHHTTT-------------TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred             hhhhhcc-------------cCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCc
Confidence            5543321             2589999999999999999999999999999999999999999999999999874432  


Q ss_pred             ---ccccceeeeeecccCCCccccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                         ....+|+.|+|||++.+..+..
T Consensus       157 ~~~~~~~gt~~y~apE~~~~~~~~~  181 (298)
T d1gz8a_         157 RTYTHEVVTLWYRAPEILLGCKYYS  181 (298)
T ss_dssp             BCTTCCBCCCTTCCHHHHTTCSSCC
T ss_pred             ccceeecccceeeehhhhccccCCC
Confidence               2356789999999987766644

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-36  Score=218.37  Aligned_cols=161  Identities=23%  Similarity=0.284  Sum_probs=134.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--.+|.||++... ++..||||++......  .+.+.+|+++++.++||||+++++++. ++..+++|||+++|+|.++
T Consensus        22 G~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~--~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~   97 (272)
T d1qpca_          22 GAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS--PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDF   97 (272)
T ss_dssp             EEETTEEEEEEEET-TTEEEEEEEECTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHH
T ss_pred             ecCCCcEEEEEEEC-CCCEEEEEEEccCcCC--HHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHH
Confidence            44567889998864 5778999999744332  347899999999999999999999875 4678999999999999987


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....             ..+++..++.++.|++.|+.|||+++++||||||+|||++.++.+||+|||+|+....+  
T Consensus        98 ~~~~~~-------------~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~  164 (272)
T d1qpca_          98 LKTPSG-------------IKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY  164 (272)
T ss_dssp             TTSHHH-------------HTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE
T ss_pred             HhhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCcc
Confidence            755432             24899999999999999999999999999999999999999999999999999865443  


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...++..|+|||++.+.+|+
T Consensus       165 ~~~~~~~gt~~y~APE~~~~~~~~  188 (272)
T d1qpca_         165 TAREGAKFPIKWTAPEAINYGTFT  188 (272)
T ss_dssp             ECCTTCCCCTTTSCHHHHHHCEEC
T ss_pred             ccccccCCcccccChHHHhCCCCC
Confidence                23457789999999876664

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-35  Score=214.05  Aligned_cols=163  Identities=26%  Similarity=0.344  Sum_probs=132.1

Q ss_pred             CCCCCceeeeccCCCC---cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQD---TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--++|.||+|.+..+   +..||+|.+.........+.+.+|+++++.++||||+++++++. ++..+++|||+++|+|
T Consensus        16 G~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l   94 (273)
T d1mp8a_          16 GEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGEL   94 (273)
T ss_dssp             EECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEH
T ss_pred             eeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcH
Confidence            4557888999876543   46799999987777777888999999999999999999999996 4678999999999999


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ  158 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~  158 (183)
                      .+++.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+|+....
T Consensus        95 ~~~~~~~~~--------------~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~  160 (273)
T d1mp8a_          95 RSFLQVRKY--------------SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED  160 (273)
T ss_dssp             HHHHHHTTT--------------TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC---------
T ss_pred             HhhhhccCC--------------CCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccC
Confidence            998766532              589999999999999999999999999999999999999999999999999986443


Q ss_pred             c------cccceeeeeecccCCCcccc
Q psy2674         159 K------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       159 ~------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .      ...+|++|+|||++.+.+|+
T Consensus       161 ~~~~~~~~~~gt~~y~apE~l~~~~~~  187 (273)
T d1mp8a_         161 STYYKASKGKLPIKWMAPESINFRRFT  187 (273)
T ss_dssp             ----------CCGGGCCHHHHHHCCCS
T ss_pred             CcceeccceecCcccchhhHhccCCCC
Confidence            2      23457899999999877664

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-34  Score=213.44  Aligned_cols=178  Identities=21%  Similarity=0.348  Sum_probs=130.3

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC-CccEEEEeeCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG-DPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~-~~~~lv~e~~~   74 (183)
                      |.-++|.||+|.     ...+++.||+|++.........+.+.+|...+..+ +|+||+.+++++..+ ..++++|||++
T Consensus        22 G~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~  101 (299)
T d1ywna1          22 GRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCK  101 (299)
T ss_dssp             EECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCT
T ss_pred             eecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecC
Confidence            445667777776     34567899999998666666667788888888777 799999999998764 46899999999


Q ss_pred             CCCHHHHHHhhccCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          75 WGDLKQFLLATRKDSKDK-SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      +|+|.+++.......... ..........+++..++.++.|++.||.|||+++|+||||||+|||++.++.+||+|||+|
T Consensus       102 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla  181 (299)
T d1ywna1         102 FGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA  181 (299)
T ss_dssp             TCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC----
T ss_pred             CCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcch
Confidence            999999997754321111 0111112235889999999999999999999999999999999999999999999999999


Q ss_pred             CCCCc-------ccccceeeeeecccCCCcccc
Q psy2674         154 KDTYQ-------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       154 ~~~~~-------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +....       ....+|+.|+|||++.+.+|+
T Consensus       182 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~  214 (299)
T d1ywna1         182 RDIYKDPDYVRKGDARLPLKWMAPETIFDRVYT  214 (299)
T ss_dssp             --CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCC
T ss_pred             hhccccccccccCceeeCccccchhHhhcCCCC
Confidence            75432       234678999999999887663

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-35  Score=213.15  Aligned_cols=161  Identities=22%  Similarity=0.244  Sum_probs=132.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQF   81 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~   81 (183)
                      |--.+|.||++....+ .+||+|++......  .+.+.+|+.+++.++|+||+++++++. ++..+++|||+++|+|.++
T Consensus        26 G~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~--~~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~  101 (285)
T d1fmka3          26 GQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS--PEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDF  101 (285)
T ss_dssp             EECSSCEEEEEEETTT-EEEEEEECCTTSSC--HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHH
T ss_pred             eeCCCeEEEEEEECCC-CEEEEEEECcccCC--HHHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCCchhhh
Confidence            4457889999987655 56999999744332  347899999999999999999999985 4678999999999999988


Q ss_pred             HHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc--
Q psy2674          82 LLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK--  159 (183)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~--  159 (183)
                      +.....             ..+++..++.++.|++.|+.|||+++++||||||+|||++.++.+||+|||+|+....+  
T Consensus       102 ~~~~~~-------------~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~  168 (285)
T d1fmka3         102 LKGETG-------------KYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  168 (285)
T ss_dssp             HSHHHH-------------TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             hhhccc-------------ccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCc
Confidence            876532             25899999999999999999999999999999999999999999999999999865433  


Q ss_pred             ----cccceeeeeecccCCCcccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~~  179 (183)
                          ...+++.|+|||++.+..++
T Consensus       169 ~~~~~~~gt~~y~aPE~~~~~~~~  192 (285)
T d1fmka3         169 TARQGAKFPIKWTAPEAALYGRFT  192 (285)
T ss_dssp             -------CCGGGSCHHHHHHCCCC
T ss_pred             eeeccccccccccChHHHhCCCCC
Confidence                24567889999999776664

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-34  Score=214.11  Aligned_cols=161  Identities=20%  Similarity=0.280  Sum_probs=136.0

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC----ccEEEEeeCCCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD----PHYLLLEYTDWG   76 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~   76 (183)
                      +|--++|.||+|.+..+|+.||||++.........+++.+|+++++.++||||+++++++..+.    ..+++++++.++
T Consensus        16 LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~~~~~~g   95 (345)
T d1pmea_          16 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGA   95 (345)
T ss_dssp             CC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCCE
T ss_pred             EeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEEEeecCC
Confidence            4667889999999999999999999987666777778999999999999999999999997643    234555667789


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++...                .+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+|...
T Consensus        96 ~L~~~l~~~----------------~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          96 DLYKLLKTQ----------------HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             EHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             chhhhhhcC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeec
Confidence            999999654                5899999999999999999999999999999999999999999999999999754


Q ss_pred             Cc--------ccccceeeeeecccCCCcc
Q psy2674         157 YQ--------KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       157 ~~--------~~~~~~~~~~~pe~~~~~~  177 (183)
                      ..        ....+++.|+|||++....
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~  188 (345)
T d1pmea_         160 DPDHDHTGFLTEYVATRWYRAPEIMLNSK  188 (345)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCGGGTTTBC
T ss_pred             cCCCccceeeccccccceechHHHhhcCC
Confidence            33        2345789999999985543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-35  Score=217.26  Aligned_cols=163  Identities=21%  Similarity=0.261  Sum_probs=133.0

Q ss_pred             CCCCCceeeeccCCCCcc----eEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTS----VLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      |--++|.||++....+|+    +||+|.+....+....+.+.+|+.+++.++||||++++++|.++ ..++++|++.+++
T Consensus        18 G~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~   96 (317)
T d1xkka_          18 GSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGC   96 (317)
T ss_dssp             EECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEEEEECCTTCB
T ss_pred             ecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeEEEEeccCCc
Confidence            456788999998877765    68888887555555566899999999999999999999999864 5678889999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+.+.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+||+|||+|+...
T Consensus        97 l~~~~~~~~~--------------~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~  162 (317)
T d1xkka_          97 LLDYVREHKD--------------NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG  162 (317)
T ss_dssp             HHHHHHHTSS--------------SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTT
T ss_pred             cccccccccc--------------CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceecc
Confidence            9998876543              68999999999999999999999999999999999999999999999999998543


Q ss_pred             cc-------cccceeeeeecccCCCcccc
Q psy2674         158 QK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..       ...+|..|+|||++.+..|+
T Consensus       163 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~  191 (317)
T d1xkka_         163 AEEKEYHAEGGKVPIKWMALESILHRIYT  191 (317)
T ss_dssp             TTCC--------CCTTTSCHHHHHHCCCC
T ss_pred             cccccccccccccCccccChHHHhcCCCC
Confidence            32       23457899999998877764

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.6e-34  Score=212.03  Aligned_cols=178  Identities=27%  Similarity=0.448  Sum_probs=143.3

Q ss_pred             CCCCCceeeeccC-----CCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASD-----PQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-++|.||+|+.     ..+++.||||++.........+++.+|+++++.++||||+++++++.+.+..++++||++++
T Consensus        22 G~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g  101 (301)
T d1lufa_          22 GEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYG  101 (301)
T ss_dssp             EECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCC
Confidence            4456778888863     45788999999987777777788999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCC---------CCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEE
Q psy2674          77 DLKQFLLATRKDSKDKSG---------SGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKI  147 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki  147 (183)
                      +|.+++............         ........+++..++.++.|++.|+.|||+++++||||||+|||++.++.+||
T Consensus       102 ~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl  181 (301)
T d1lufa_         102 DLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKI  181 (301)
T ss_dssp             BHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             cHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEE
Confidence            999999765432110000         01112235889999999999999999999999999999999999999999999


Q ss_pred             ecccCCCCCCcc-------cccceeeeeecccCCCcccc
Q psy2674         148 SLSGLSKDTYQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       148 ~dfg~a~~~~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +|||+|+...+.       ...++..|+|||++.+.+|+
T Consensus       182 ~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t  220 (301)
T d1lufa_         182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYT  220 (301)
T ss_dssp             CCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCC
T ss_pred             ccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCC
Confidence            999998744332       24456789999999887774

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-34  Score=214.75  Aligned_cols=161  Identities=19%  Similarity=0.310  Sum_probs=135.1

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC------ccEEEEeeC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD------PHYLLLEYT   73 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~------~~~lv~e~~   73 (183)
                      +|.-++|.||+|.+..+|+.||+|++... .+....+.+.+|+++++.++||||++++++|...+      .++++|||+
T Consensus        26 lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~  105 (346)
T d1cm8a_          26 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM  105 (346)
T ss_dssp             C------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc
Confidence            46678899999999999999999999743 45556678899999999999999999999997654      469999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      + .+|.......                .+++..++.++.|++.||.|||++||+||||||+|||++.++.+|++|||+|
T Consensus       106 ~-~~l~~~~~~~----------------~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a  168 (346)
T d1cm8a_         106 G-TDLGKLMKHE----------------KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA  168 (346)
T ss_dssp             S-EEHHHHHHHC----------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred             c-ccHHHHHHhc----------------cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcccccccccccccce
Confidence            4 7787776543                5999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCcc--cccceeeeeecccCCCccc
Q psy2674         154 KDTYQK--EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       154 ~~~~~~--~~~~~~~~~~pe~~~~~~~  178 (183)
                      +.....  ...++++|+|||++.+..+
T Consensus       169 ~~~~~~~~~~~~t~~y~aPE~~~~~~~  195 (346)
T d1cm8a_         169 RQADSEMTGYVVTRWYRAPEVILNWMR  195 (346)
T ss_dssp             EECCSSCCSSCSCGGGCCTHHHHTTTC
T ss_pred             eccCCccccccccccccCHHHHcCCCC
Confidence            866543  5678999999999876444

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-35  Score=214.76  Aligned_cols=163  Identities=18%  Similarity=0.155  Sum_probs=136.3

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC--C---HHHHHHHHHHHHHHhcCC--CcceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK--D---DEALHEFKREIDLFCKLD--HAHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~--~---~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |--++|.||+|.+..+++.||+|++....  +   .....++.+|+.+++.++  ||||+++++++.+++..+++||++.
T Consensus        13 G~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~   92 (273)
T d1xwsa_          13 GSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE   92 (273)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCS
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEecc
Confidence            44568899999999999999999986321  1   111224678999999985  8999999999999999999999997


Q ss_pred             C-CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-CCceEEecccC
Q psy2674          75 W-GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-DLSVKISLSGL  152 (183)
Q Consensus        75 ~-~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-~~~~ki~dfg~  152 (183)
                      + +++.+++....               .+++..++.++.|++.||.|||+++++||||||+|||++. .+.+||+|||+
T Consensus        93 ~~~~l~~~~~~~~---------------~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~  157 (273)
T d1xwsa_          93 PVQDLFDFITERG---------------ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGS  157 (273)
T ss_dssp             SEEEHHHHHHHHC---------------SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             CcchHHHHHhccC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECcccc
Confidence            5 57778877653               4899999999999999999999999999999999999984 57999999999


Q ss_pred             CCCCCc---ccccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQ---KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~---~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      |.....   ....||+.|+|||++.+.+|+
T Consensus       158 a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~  187 (273)
T d1xwsa_         158 GALLKDTVYTDFDGTRVYSPPEWIRYHRYH  187 (273)
T ss_dssp             CEECCSSCBCCCCSCGGGSCHHHHHHSCBC
T ss_pred             ceecccccccccccCCCcCCHHHHcCCCCC
Confidence            975443   356789999999998776654

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-34  Score=206.91  Aligned_cols=163  Identities=24%  Similarity=0.263  Sum_probs=129.1

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCC--CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHS--KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |.-.+|.||++..   ......||+|++...  .+.+..+.+.+|+.+++.++||||+++++++.+ ...++++||++++
T Consensus        17 G~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~   95 (273)
T d1u46a_          17 GDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLG   95 (273)
T ss_dssp             C----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTC
T ss_pred             ecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeeeecCc
Confidence            5566788888764   234558999998743  344556689999999999999999999999975 4678999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      ++.+.+.....              .+++..++.++.|++.||.|||+++++||||||+||+++.++.+|++|||+++..
T Consensus        96 ~l~~~~~~~~~--------------~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~  161 (273)
T d1u46a_          96 SLLDRLRKHQG--------------HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL  161 (273)
T ss_dssp             BHHHHHHHHGG--------------GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred             chhhhhhcccC--------------CCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhc
Confidence            99988876643              5899999999999999999999999999999999999999999999999999865


Q ss_pred             Ccc--------cccceeeeeecccCCCcccc
Q psy2674         157 YQK--------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       157 ~~~--------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...        ...++.+|+|||++.+.+|+
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~  192 (273)
T d1u46a_         162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFS  192 (273)
T ss_dssp             CC-CCEEEC-----CCGGGCCHHHHHHCEEE
T ss_pred             ccCCCcceecCccccCcccCCHHHHhCCCCC
Confidence            432        23456789999999887664

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-34  Score=208.41  Aligned_cols=160  Identities=19%  Similarity=0.284  Sum_probs=128.7

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec-CCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD-GDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-.+|.||++..  .|.+||+|++.....   .+.+.+|+++++.++||||+++++++.+ ++.++++|||+++|+|.+
T Consensus        16 G~G~fg~Vy~~~~--~~~~vAvK~i~~~~~---~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~   90 (262)
T d1byga_          16 GKGEFGDVMLGDY--RGNKVAVKCIKNDAT---AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVD   90 (262)
T ss_dssp             EECSSCEEEEEEE--TTEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHH
T ss_pred             ecCCCeEEEEEEE--CCeEEEEEEECcHHH---HHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHH
Confidence            4456788998876  477899999975433   3478999999999999999999999865 467899999999999999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++.....             ..+++..++.++.|++.|+.|||+++++||||+|+||+++.++.+|++|||+++..... 
T Consensus        91 ~l~~~~~-------------~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~  157 (262)
T d1byga_          91 YLRSRGR-------------SVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  157 (262)
T ss_dssp             HHHHHHH-------------HHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             HHHhcCC-------------CCCCHHHHHHHHHHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCC
Confidence            9976532             14889999999999999999999999999999999999999999999999999865443 


Q ss_pred             -cccceeeeeecccCCCcccc
Q psy2674         160 -EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       160 -~~~~~~~~~~pe~~~~~~~~  179 (183)
                       ...++..|+|||++.+..|+
T Consensus       158 ~~~~~~~~y~aPE~l~~~~~t  178 (262)
T d1byga_         158 DTGKLPVKWTAPEALREKKFS  178 (262)
T ss_dssp             ----CCTTTSCHHHHHHCCCC
T ss_pred             ccccccccCCChHHHhCCCCC
Confidence             34557789999999877664

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-34  Score=209.86  Aligned_cols=173  Identities=22%  Similarity=0.387  Sum_probs=142.0

Q ss_pred             CCCCCceeeeccCC-----CCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCC
Q psy2674           2 SLIPNARGLKASDP-----QDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWG   76 (183)
Q Consensus         2 ~~~~~~~~~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   76 (183)
                      |--.+|.||+|...     .++..||||++...........+.+|+++++.++||||+++++++..++..+++|||+++|
T Consensus        29 G~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g  108 (308)
T d1p4oa_          29 GQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRG  108 (308)
T ss_dssp             EECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred             eeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCC
Confidence            34466778777653     4578999999987667777778999999999999999999999999999999999999999


Q ss_pred             CHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCC
Q psy2674          77 DLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDT  156 (183)
Q Consensus        77 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~  156 (183)
                      +|.+++.........     ......+++..+..++.|++.|+.|||+++++||||||+|||++.++.+||+|||+|+..
T Consensus       109 ~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~  183 (308)
T d1p4oa_         109 DLKSYLRSLRPAMAN-----NPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI  183 (308)
T ss_dssp             BHHHHHHHHHHHHHH-----CTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred             CHHHHHHhccccccc-----ccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceec
Confidence            999998765321000     001124688899999999999999999999999999999999999999999999999855


Q ss_pred             Ccc-------cccceeeeeecccCCCcccc
Q psy2674         157 YQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       157 ~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...       ...+++.|+|||.+.+.+|+
T Consensus       184 ~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~  213 (308)
T d1p4oa_         184 YETDYYRKGGKGLLPVRWMSPESLKDGVFT  213 (308)
T ss_dssp             GGGGCEEGGGSSEECGGGCCHHHHHHCCCC
T ss_pred             cCCcceeeccceecccccCCHHHHccCCCC
Confidence            432       23567889999998877664

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.9e-34  Score=209.86  Aligned_cols=164  Identities=22%  Similarity=0.365  Sum_probs=138.7

Q ss_pred             CCCCCceeeeccCCCC---cceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEec-CCccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQD---TSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRD-GDPHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~lv~e~~~~~~   77 (183)
                      |.-++|+||++....+   ...||||.+....+....+++.+|++++++++||||+++++++.+ ++..+++|||+++++
T Consensus        36 G~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~  115 (311)
T d1r0pa_          36 GRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGD  115 (311)
T ss_dssp             EEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCB
T ss_pred             eecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCc
Confidence            4557889999876543   346899999876777778899999999999999999999999875 567899999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      |.+++.....              .+++..++.++.|++.|+.|+|+.+++||||||+|||++.++.+||+|||+++...
T Consensus       116 l~~~~~~~~~--------------~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~  181 (311)
T d1r0pa_         116 LRNFIRNETH--------------NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMY  181 (311)
T ss_dssp             HHHHHHCTTC--------------CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTT
T ss_pred             hhhhhccccc--------------cchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhcc
Confidence            9998876543              57788899999999999999999999999999999999999999999999998544


Q ss_pred             cc---------cccceeeeeecccCCCcccc
Q psy2674         158 QK---------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~---------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..         ...+|..|+|||.+.+..|+
T Consensus       182 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  212 (311)
T d1r0pa_         182 DKEFDSVHNKTGAKLPVKWMALESLQTQKFT  212 (311)
T ss_dssp             TTTCCCTTCTTCSSCCGGGSCHHHHHHCCCC
T ss_pred             ccccccceecccccccccccChHHHhcCCCC
Confidence            32         23467889999998766553

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-33  Score=207.58  Aligned_cols=178  Identities=24%  Similarity=0.378  Sum_probs=139.4

Q ss_pred             CCCCCceeeeccCCC-------CcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeC
Q psy2674           2 SLIPNARGLKASDPQ-------DTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYT   73 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~   73 (183)
                      |.-++|.||++....       ++..||+|++...........+.+|...+..+ +||||++++++|.+++..+++|||+
T Consensus        22 G~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~  101 (299)
T d1fgka_          22 GEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA  101 (299)
T ss_dssp             C-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             eecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEcc
Confidence            556677788776533       34689999998777777777899999999888 8999999999999999999999999


Q ss_pred             CCCCHHHHHHhhccCCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          74 DWGDLKQFLLATRKDSKD-KSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++|+|.+++......... ...........+++..++.++.|++.||.|||+++++||||||+|||++.++.+||+|||+
T Consensus       102 ~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~  181 (299)
T d1fgka_         102 SKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL  181 (299)
T ss_dssp             TTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTC
T ss_pred             CCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchh
Confidence            999999999765432111 0111122234689999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc-------cccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      +......       ...+++.|+|||++.+.+|+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~  215 (299)
T d1fgka_         182 ARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYT  215 (299)
T ss_dssp             CCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCC
T ss_pred             hccccccccccccccCCCChhhhhhhHhcCCCCC
Confidence            9855432       24567889999999887775

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-33  Score=207.77  Aligned_cols=178  Identities=22%  Similarity=0.303  Sum_probs=143.9

Q ss_pred             CCCCCceeeecc-----CCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCC
Q psy2674           2 SLIPNARGLKAS-----DPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~-----~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~   75 (183)
                      |.-.+|.||+|.     ...+++.||||++...........+.+|+.+++.+ +||||+++++++.+++..+++|||+++
T Consensus        32 G~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~  111 (311)
T d1t46a_          32 GAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCY  111 (311)
T ss_dssp             EECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred             eecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCC
Confidence            445677777764     46788999999998777777777899999999999 799999999999999999999999999


Q ss_pred             CCHHHHHHhhccCCCCCC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          76 GDLKQFLLATRKDSKDKS---GSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      |+|.+++...........   .........+++..++.++.||+.|+.|||+++++||||||+||+++.++.++++|||.
T Consensus       112 g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~  191 (311)
T d1t46a_         112 GDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGL  191 (311)
T ss_dssp             EEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGG
T ss_pred             CCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccch
Confidence            999999987643211100   00112223689999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcc-------cccceeeeeecccCCCcccc
Q psy2674         153 SKDTYQK-------EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       153 a~~~~~~-------~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++.....       ...+|+.|+|||++.+..|+
T Consensus       192 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  225 (311)
T d1t46a_         192 ARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYT  225 (311)
T ss_dssp             GSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCC
T ss_pred             heeccCCCcceEeeecccChHHcCHHHhcCCCCC
Confidence            9865432       34568889999998766553

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-34  Score=211.03  Aligned_cols=178  Identities=25%  Similarity=0.342  Sum_probs=137.7

Q ss_pred             CCCCCceeeeccCCCCcc--eEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTS--VLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      |--.+|.||+|....++.  .||||.+.........+.+.+|+++++.+ +||||+++++++.+++..+++|||+++|+|
T Consensus        19 G~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L   98 (309)
T d1fvra_          19 GEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL   98 (309)
T ss_dssp             ECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred             eeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcH
Confidence            455788999998887776  46777776555555566899999999998 799999999999999999999999999999


Q ss_pred             HHHHHhhccCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDK-SGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~  157 (183)
                      .+++.......... ..........+++..++.++.|++.|+.|+|+++++||||||+|||++.++.+||+|||+|+...
T Consensus        99 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~  178 (309)
T d1fvra_          99 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE  178 (309)
T ss_dssp             HHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSC
T ss_pred             HHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEcccccccccc
Confidence            99997542100000 00001122368999999999999999999999999999999999999999999999999997554


Q ss_pred             cc----cccceeeeeecccCCCcccc
Q psy2674         158 QK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ..    ...+|..|+|||.+.+..|+
T Consensus       179 ~~~~~~~~~gt~~y~aPE~l~~~~~~  204 (309)
T d1fvra_         179 VYVKKTMGRLPVRWMAIESLNYSVYT  204 (309)
T ss_dssp             EECCC----CCTTTCCHHHHHHCEEC
T ss_pred             ccccccceecCCcccchHHhccCCCC
Confidence            43    34567889999999877663

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=9.9e-34  Score=207.49  Aligned_cols=161  Identities=20%  Similarity=0.245  Sum_probs=132.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |--.+|+||+|.+. +++.||+|++.... +....+++.+|+++++.++||||+++++.+.+++..++++|++.++.+..
T Consensus        11 G~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~   89 (286)
T d1ob3a_          11 GEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKL   89 (286)
T ss_dssp             EEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHH
T ss_pred             ecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHH
Confidence            44567889999874 78999999997432 23334578999999999999999999999999999999999998665555


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCc--
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQ--  158 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~--  158 (183)
                      +....+               .+++..++.++.|++.||+|||+++|+||||||+|||++.++.+|++|||.|.....  
T Consensus        90 ~~~~~~---------------~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~  154 (286)
T d1ob3a_          90 LDVCEG---------------GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV  154 (286)
T ss_dssp             HHTSTT---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred             HHhhcC---------------CcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCc
Confidence            554332               599999999999999999999999999999999999999999999999999874332  


Q ss_pred             ---ccccceeeeeecccCCCccc
Q psy2674         159 ---KEYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       159 ---~~~~~~~~~~~pe~~~~~~~  178 (183)
                         ....+++.|+|||.+.+..+
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~  177 (286)
T d1ob3a_         155 RKYTHEIVTLWYRAPDVLMGSKK  177 (286)
T ss_dssp             -------CCCTTCCHHHHTTCCS
T ss_pred             cccceecccchhhhHHHHhCCCC
Confidence               24467888999999876443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-33  Score=202.61  Aligned_cols=162  Identities=19%  Similarity=0.259  Sum_probs=140.5

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-++|+||+|.+..+++.||+|++... .......++.+|+.+++.++||||+++++++.+++..+++++++.+++|..
T Consensus        11 G~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~   90 (292)
T d1unla_          11 GEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKY   90 (292)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHH
T ss_pred             ecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeecccccccc
Confidence            4567899999999999999999998633 334456789999999999999999999999999999999999999888887


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCCCCCcc-
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSKDTYQK-  159 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~~~~~~-  159 (183)
                      ++....               .+++..++.++.|++.||+|||+++|+||||||+|||++.++.+|++|||.|...... 
T Consensus        91 ~~~~~~---------------~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~  155 (292)
T d1unla_          91 FDSCNG---------------DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV  155 (292)
T ss_dssp             HHHTTT---------------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC
T ss_pred             cccccc---------------ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCC
Confidence            776553               5889999999999999999999999999999999999999999999999999865442 


Q ss_pred             ----cccceeeeeecccCCCccc
Q psy2674         160 ----EYYKYRWVICSNIAEGRRL  178 (183)
Q Consensus       160 ----~~~~~~~~~~pe~~~~~~~  178 (183)
                          ...++++|+|||++.+..+
T Consensus       156 ~~~~~~~~~~~~~~pe~~~~~~~  178 (292)
T d1unla_         156 RCYSAEVVTLWYRPPDVLFGAKL  178 (292)
T ss_dssp             SCCCSCCSCGGGCCHHHHTTCSC
T ss_pred             ccceeeccccchhhhhHhccCCC
Confidence                3345788999999876543

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.4e-33  Score=208.46  Aligned_cols=164  Identities=18%  Similarity=0.255  Sum_probs=130.0

Q ss_pred             CCCCCceeeeccCCCC-cceEEEeeccCC-CCHHHHHHHHHHHHHHhcC---CCcceeeEEeEEec-----CCccEEEEe
Q psy2674           2 SLIPNARGLKASDPQD-TSVLMAKSLVHS-KDDEALHEFKREIDLFCKL---DHAHVVKMIGICRD-----GDPHYLLLE   71 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~-~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l---~h~~i~~~~~~~~~-----~~~~~lv~e   71 (183)
                      |--++|.||+|.+..+ ++.||+|++... ........+.+|+++++.+   +||||++++++|..     ....++++|
T Consensus        16 G~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e   95 (305)
T d1blxa_          16 GEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFE   95 (305)
T ss_dssp             EEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEE
T ss_pred             ecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccccCceEEEEEE
Confidence            4457889999998655 678999998632 2222222456677776655   79999999999853     346889999


Q ss_pred             eCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEeccc
Q psy2674          72 YTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSG  151 (183)
Q Consensus        72 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg  151 (183)
                      +++++.+........              ..+++..++.++.|++.||+|||+++|+||||||+|||++..+.+||+|||
T Consensus        96 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg  161 (305)
T d1blxa_          96 HVDQDLTTYLDKVPE--------------PGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG  161 (305)
T ss_dssp             CCSCBHHHHHHHSCT--------------TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             eccCCchhhhhhccC--------------CCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchh
Confidence            999666554443332              258899999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCcc----cccceeeeeecccCCCcccc
Q psy2674         152 LSKDTYQK----EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       152 ~a~~~~~~----~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ++......    ...||+.|+|||++.+.+|+
T Consensus       162 ~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~  193 (305)
T d1blxa_         162 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYA  193 (305)
T ss_dssp             SCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCC
T ss_pred             hhhhhcccccCCCcccChhhcCcchhcCCCCC
Confidence            99865443    56779999999999998885

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4.7e-33  Score=206.68  Aligned_cols=160  Identities=20%  Similarity=0.259  Sum_probs=129.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCC-CHHHHHHHHHHHHHHhcCCCcceeeEEeEEec--------CCccEEEEee
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSK-DDEALHEFKREIDLFCKLDHAHVVKMIGICRD--------GDPHYLLLEY   72 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--------~~~~~lv~e~   72 (183)
                      |--++|.||+|.+..+|+.||||++.... ......++.+|+++++.++|+|++++++++..        ++..+++||+
T Consensus        19 G~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~   98 (318)
T d3blha1          19 GQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDF   98 (318)
T ss_dssp             EECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEEC
T ss_pred             ecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEec
Confidence            45678999999999999999999986332 23334578899999999999999999999865        3457999999


Q ss_pred             CCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccC
Q psy2674          73 TDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGL  152 (183)
Q Consensus        73 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~  152 (183)
                      ++++.+.......               ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.+|++|||+
T Consensus        99 ~~~~~~~~~~~~~---------------~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1          99 CEHDLAGLLSNVL---------------VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             CCEEHHHHHTCTT---------------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             cCCCccchhhhcc---------------cccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecce
Confidence            9855554433222               2588999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCc---------ccccceeeeeecccCCCc
Q psy2674         153 SKDTYQ---------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       153 a~~~~~---------~~~~~~~~~~~pe~~~~~  176 (183)
                      +.....         ....+|++|+|||++.+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~  196 (318)
T d3blha1         164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE  196 (318)
T ss_dssp             CEECCC-----CCCCCSCCSCGGGCCHHHHTTC
T ss_pred             eeecccccccccccccceecCHHHhhHHHHcCC
Confidence            974432         235679999999998764

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.98  E-value=7.3e-33  Score=206.45  Aligned_cols=154  Identities=17%  Similarity=0.241  Sum_probs=131.4

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecC--CccEEEEeeCCCCCH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDG--DPHYLLLEYTDWGDL   78 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~--~~~~lv~e~~~~~~L   78 (183)
                      |.-++|+||+|.+..+++.||+|++....    .+++.+|+++++.+ .||||+++++++..+  ...+++|||+++++|
T Consensus        44 G~G~fg~V~~a~~~~~~~~vAiK~i~~~~----~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L  119 (328)
T d3bqca1          44 GRGKYSEVFEAINITNNEKVVVKILKPVK----KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDF  119 (328)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECSSC----HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBG
T ss_pred             ecCcCeEEEEEEECCCCCEEEEEEECHHH----HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcH
Confidence            55678999999999999999999987542    34688999999999 599999999999854  468999999999998


Q ss_pred             HHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC-CceEEecccCCCCCC
Q psy2674          79 KQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGLSKDTY  157 (183)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~-~~~ki~dfg~a~~~~  157 (183)
                      .+..                  ..+++..++.++.||+.||.|||++||+||||||+|||++.+ +.++++|||+|....
T Consensus       120 ~~~~------------------~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~  181 (328)
T d3bqca1         120 KQLY------------------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH  181 (328)
T ss_dssp             GGTT------------------TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECC
T ss_pred             HHHh------------------cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceecc
Confidence            6643                  158999999999999999999999999999999999999854 569999999998654


Q ss_pred             c----ccccceeeeeecccCCCcc
Q psy2674         158 Q----KEYYKYRWVICSNIAEGRR  177 (183)
Q Consensus       158 ~----~~~~~~~~~~~pe~~~~~~  177 (183)
                      .    ....+|+.|+|||++.+..
T Consensus       182 ~~~~~~~~~~t~~y~aPE~~~~~~  205 (328)
T d3bqca1         182 PGQEYNVRVASRYFKGPELLVDYQ  205 (328)
T ss_dssp             TTCCCCSCCSCGGGCCHHHHTTCC
T ss_pred             CCCcccccccCccccCcccccCCC
Confidence            3    3456789999999987644

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.5e-32  Score=206.26  Aligned_cols=163  Identities=20%  Similarity=0.248  Sum_probs=135.2

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC-----CccEEEEeeCC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG-----DPHYLLLEYTD   74 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-----~~~~lv~e~~~   74 (183)
                      +|.-++|.||+|.+..+|+.||+|++... .+....+++.+|+++++.++|+|++++++++...     ...+++++++.
T Consensus        26 LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~  105 (348)
T d2gfsa1          26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM  105 (348)
T ss_dssp             CGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECC
T ss_pred             EecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeec
Confidence            46678899999999999999999999743 4555566889999999999999999999998643     23466677788


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+++...                .+++..++.++.|++.||.|||++||+||||||+|||++.++.++++|||+|.
T Consensus       106 gg~L~~~~~~~----------------~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1         106 GADLNNIVKCQ----------------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             SEEHHHHHTTC----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             CCchhhhcccc----------------cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccccccccccccccchhc
Confidence            89999988543                58999999999999999999999999999999999999999999999999998


Q ss_pred             CCCcc--cccceeeeeecccCCCcccc
Q psy2674         155 DTYQK--EYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       155 ~~~~~--~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .....  ...+++.|+|||+..+..+.
T Consensus       170 ~~~~~~~~~~g~~~y~apE~~~~~~~~  196 (348)
T d2gfsa1         170 HTDDEMTGYVATRWYRAPEIMLNWMHY  196 (348)
T ss_dssp             CCTGGGSSSCHHHHTSCHHHHTTCSCC
T ss_pred             ccCcccccccccccccCchhhcCCccC
Confidence            66543  46678999999997775543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.6e-32  Score=205.44  Aligned_cols=162  Identities=20%  Similarity=0.306  Sum_probs=130.5

Q ss_pred             CCCCCCceeeeccCCCCcceEEEeeccCC-CCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------CccEEEEeeC
Q psy2674           1 MSLIPNARGLKASDPQDTSVLMAKSLVHS-KDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------DPHYLLLEYT   73 (183)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~   73 (183)
                      +|.-++|.||+|.+..+|+.||||++... .+.....++.+|+.+++.++||||++++++|..+      ..+|++|||+
T Consensus        25 LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~  104 (355)
T d2b1pa1          25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM  104 (355)
T ss_dssp             CSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECC
T ss_pred             eecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEecc
Confidence            46778899999999999999999999743 4556667889999999999999999999999643      5679999999


Q ss_pred             CCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCC
Q psy2674          74 DWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLS  153 (183)
Q Consensus        74 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a  153 (183)
                      . +++.+.+..                 .+++..++.++.|++.|+.|||++||+||||||.|||++.++.++++|||++
T Consensus       105 ~-~~l~~~~~~-----------------~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~  166 (355)
T d2b1pa1         105 D-ANLCQVIQM-----------------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA  166 (355)
T ss_dssp             S-EEHHHHHTS-----------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred             c-hHHHHhhhc-----------------CCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccccccceeeechhhh
Confidence            8 555554421                 4889999999999999999999999999999999999999999999999998


Q ss_pred             CCCCc----ccccceeeeeecccCCCccccc
Q psy2674         154 KDTYQ----KEYYKYRWVICSNIAEGRRLNV  180 (183)
Q Consensus       154 ~~~~~----~~~~~~~~~~~pe~~~~~~~~~  180 (183)
                      +....    ....+|+.|+|||++.+..|++
T Consensus       167 ~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~  197 (355)
T d2b1pa1         167 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKE  197 (355)
T ss_dssp             --------------CCTTCCHHHHTTCCCCT
T ss_pred             hccccccccccccccccccChhhhcCCCCCC
Confidence            85544    3456789999999999877653

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.97  E-value=3.9e-32  Score=199.55  Aligned_cols=160  Identities=16%  Similarity=0.143  Sum_probs=136.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-++|.||+|.+..+++.||+|++....+..   .+.+|++.++.++ |+|++.+++++.++...+++||+++ ++|.+
T Consensus        14 G~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~---~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~~-~~l~~   89 (293)
T d1csna_          14 GEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAP---QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLG-PSLED   89 (293)
T ss_dssp             EECSSCEEEEEEETTTTEEEEEEEEECCTTSC---CHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECCC-CBHHH
T ss_pred             ecCCCeEEEEEEECCCCCEEEEEEEccccCcH---HHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEecC-CCHHH
Confidence            45678999999999999999999986443322   4677888999985 5899999999999999999999985 99999


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEecc-----CCceEEecccCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISS-----DLSVKISLSGLSKD  155 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~-----~~~~ki~dfg~a~~  155 (183)
                      ++.....              .++...+..++.|++.|+.+||++|++||||||+||+++.     .+.++|+|||+|+.
T Consensus        90 ~~~~~~~--------------~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          90 LLDLCGR--------------KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             HHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred             HHHhhcc--------------chhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEE
Confidence            9876543              5899999999999999999999999999999999999963     57899999999975


Q ss_pred             CCc------------ccccceeeeeecccCCCcccc
Q psy2674         156 TYQ------------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       156 ~~~------------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      ...            ....||+.|+|||++.+++|+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~  191 (293)
T d1csna_         156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQS  191 (293)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCC
T ss_pred             cccCccccceeecccCceEEchhhcCHHHhcCCCCC
Confidence            321            235689999999999998775

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-32  Score=206.15  Aligned_cols=158  Identities=19%  Similarity=0.202  Sum_probs=126.6

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecC------CccEEEEeeCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDG------DPHYLLLEYTDW   75 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~lv~e~~~~   75 (183)
                      |.-++|.||+|.+..+++.||+|++.....     ...+|+++++.++|+||++++++|...      ..++++|||+++
T Consensus        29 G~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-----~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~  103 (350)
T d1q5ka_          29 GNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE  103 (350)
T ss_dssp             EEETTEEEEEEEETTTCCEEEEEEEECCSS-----SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSE
T ss_pred             eeCcCeEEEEEEECCCCCEEEEEEECccch-----HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCC
Confidence            456789999999999999999999975432     234799999999999999999998542      246899999985


Q ss_pred             CCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccC-CceEEecccCCC
Q psy2674          76 GDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSD-LSVKISLSGLSK  154 (183)
Q Consensus        76 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~-~~~ki~dfg~a~  154 (183)
                      + +.+.+.....           ....+++..++.++.|++.||+|||++||+||||||+|||++.+ ..+||+|||++.
T Consensus       104 ~-~~~~l~~~~~-----------~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~  171 (350)
T d1q5ka_         104 T-VYRVARHYSR-----------AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK  171 (350)
T ss_dssp             E-HHHHHHHHHH-----------TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred             c-cHHHHHhhhh-----------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchh
Confidence            4 4444332211           11258999999999999999999999999999999999999866 489999999998


Q ss_pred             CCCcc----cccceeeeeecccCCCc
Q psy2674         155 DTYQK----EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       155 ~~~~~----~~~~~~~~~~pe~~~~~  176 (183)
                      .....    ...+++.|+|||++.+.
T Consensus       172 ~~~~~~~~~~~~gt~~y~aPE~~~~~  197 (350)
T d1q5ka_         172 QLVRGEPNVSYICSRYYRAPELIFGA  197 (350)
T ss_dssp             ECCTTSCCCSCCSCTTSCCHHHHTTC
T ss_pred             hccCCcccccccccccccChHHhhcc
Confidence            55432    45678899999987654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.4e-32  Score=200.74  Aligned_cols=155  Identities=15%  Similarity=0.203  Sum_probs=125.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC----ccEEEEeeCCCCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHVVKMIGICRDGD----PHYLLLEYTDWGD   77 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----~~~lv~e~~~~~~   77 (183)
                      |--.+|.||+++.  +|+.||+|++.....  .......|+..+..++||||+++++++.+++    ..+++|||+++|+
T Consensus        12 G~G~fg~Vy~~~~--~g~~vAvK~~~~~~~--~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~   87 (303)
T d1vjya_          12 GKGRFGEVWRGKW--RGEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS   87 (303)
T ss_dssp             ECCSSSEEEEEEE--TTEEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCB
T ss_pred             eeCCCeEEEEEEE--CCEEEEEEEECccch--hHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCC
Confidence            4567888998874  689999999864322  1122334555566789999999999998654    4789999999999


Q ss_pred             HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc--------CCceecccccceeEeccCCceEEec
Q psy2674          78 LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD--------KRLIHKDIAARNCLISSDLSVKISL  149 (183)
Q Consensus        78 L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~--------~~ivH~di~~~nil~~~~~~~ki~d  149 (183)
                      |.+++...                .+++..++.++.|++.|+.|+|+        ++|+||||||+|||++.++.+||+|
T Consensus        88 L~~~l~~~----------------~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~D  151 (303)
T d1vjya_          88 LFDYLNRY----------------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             HHHHHHHC----------------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECC
T ss_pred             HHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEe
Confidence            99999764                48899999999999999999996        5999999999999999999999999


Q ss_pred             ccCCCCCCc---------ccccceeeeeecccCCCc
Q psy2674         150 SGLSKDTYQ---------KEYYKYRWVICSNIAEGR  176 (183)
Q Consensus       150 fg~a~~~~~---------~~~~~~~~~~~pe~~~~~  176 (183)
                      ||+++....         ....+|+.|+|||++.+.
T Consensus       152 FGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  187 (303)
T d1vjya_         152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDS  187 (303)
T ss_dssp             CTTCEEEETTTTEECC----CCSCGGGCCHHHHTTC
T ss_pred             cCccccccCCCcceeccccceecccCcCChhhcccc
Confidence            999874322         245679999999998764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=3.1e-31  Score=195.28  Aligned_cols=160  Identities=16%  Similarity=0.120  Sum_probs=131.1

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcce-eeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHV-VKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i-~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      |.-++|.||+|.+..+++.||+|++......   .++.+|+++++.++|+++ +.+.+++.+.+..+++||+++ ++|..
T Consensus        16 G~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~-~~l~~   91 (299)
T d1ckia_          16 GSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLG-PSLED   91 (299)
T ss_dssp             EECSSSEEEEEEETTTTEEEEEEEEESCTTS---CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCC-CBHHH
T ss_pred             eeCCCcEEEEEEECCCCCEEEEEEEchhccC---HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcC-Cchhh
Confidence            5567899999999999999999998754332   257889999999976664 455566677788899999996 77777


Q ss_pred             HHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEec---cCCceEEecccCCCCCC
Q psy2674          81 FLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLIS---SDLSVKISLSGLSKDTY  157 (183)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~---~~~~~ki~dfg~a~~~~  157 (183)
                      .+.....              .+++..+..++.|++.||+|||+++|+||||||+|||++   .+..++++|||+|+...
T Consensus        92 ~~~~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_          92 LFNFCSR--------------KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             HHHHTTT--------------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred             hhhhccC--------------CCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceecc
Confidence            6665433              589999999999999999999999999999999999975   46679999999998543


Q ss_pred             c------------ccccceeeeeecccCCCcccc
Q psy2674         158 Q------------KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       158 ~------------~~~~~~~~~~~pe~~~~~~~~  179 (183)
                      .            ....||+.|+|||++.+.+|+
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  191 (299)
T d1ckia_         158 DARTHQHIPYRENKNLTGTARYASINTHLGIEQS  191 (299)
T ss_dssp             CTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCC
T ss_pred             ccccccceeccccCCcCCCccccCHHHHhCCCCC
Confidence            2            234679999999999998775

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=5.3e-32  Score=201.16  Aligned_cols=160  Identities=17%  Similarity=0.228  Sum_probs=135.7

Q ss_pred             CCCCCceeeeccC---CCCcceEEEeeccCCC---CHHHHHHHHHHHHHHhcCCC-cceeeEEeEEecCCccEEEEeeCC
Q psy2674           2 SLIPNARGLKASD---PQDTSVLMAKSLVHSK---DDEALHEFKREIDLFCKLDH-AHVVKMIGICRDGDPHYLLLEYTD   74 (183)
Q Consensus         2 ~~~~~~~~~~~~~---~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~h-~~i~~~~~~~~~~~~~~lv~e~~~   74 (183)
                      |.-++|+||+|.+   ..+|+.||+|++....   +....+.+.+|++++++++| |||+++++++.+....++++||+.
T Consensus        33 G~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~  112 (322)
T d1vzoa_          33 GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYIN  112 (322)
T ss_dssp             EETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred             ecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeeccc
Confidence            4567888998865   5579999999986321   22223468899999999965 899999999999999999999999


Q ss_pred             CCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCceEEecccCCC
Q psy2674          75 WGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus        75 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      +++|.+.+....               .+.+..+..++.|++.|++|+|+++++||||||+||+++.++.++|+|||+|+
T Consensus       113 ~~~L~~~i~~~~---------------~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         113 GGELFTHLSQRE---------------RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK  177 (322)
T ss_dssp             SCBHHHHHHHHS---------------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             ccHHHHHHHhcc---------------cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchh
Confidence            999999998775               47889999999999999999999999999999999999999999999999997


Q ss_pred             CCCcc------cccceeeeeecccCCCc
Q psy2674         155 DTYQK------EYYKYRWVICSNIAEGR  176 (183)
Q Consensus       155 ~~~~~------~~~~~~~~~~pe~~~~~  176 (183)
                      .....      ...+++.|++||.+.+.
T Consensus       178 ~~~~~~~~~~~~~~g~~~~~~pe~~~~~  205 (322)
T d1vzoa_         178 EFVADETERAYDFCGTIEYMAPDIVRGG  205 (322)
T ss_dssp             ECCGGGGGGGCGGGSCCTTCCHHHHTTC
T ss_pred             hhcccccccccccccccccchhHHhhcC
Confidence            54332      35568889999998664

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=9.7e-26  Score=169.56  Aligned_cols=163  Identities=16%  Similarity=0.161  Sum_probs=126.2

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-----------CcceeeEEeEEecC--CccEE
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-----------HAHVVKMIGICRDG--DPHYL   68 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------h~~i~~~~~~~~~~--~~~~l   68 (183)
                      |.-++|+||+|.+..+|+.||||++...  ....+.+.+|+.+++.++           |+||+++++++..+  ...++
T Consensus        22 G~G~fg~Vy~~~~~~~g~~vAvKvi~~~--~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~   99 (362)
T d1q8ya_          22 GWGHFSTVWLAKDMVNNTHVAMKIVRGD--KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHV   99 (362)
T ss_dssp             EECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEE
T ss_pred             eeCCCeEEEEEEECCCCCEEEEEEEecc--ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceee
Confidence            5567899999999999999999998743  333456788888887764           57899999888653  44556


Q ss_pred             EEeeCCCCC-HHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCceecccccceeEeccCC---
Q psy2674          69 LLEYTDWGD-LKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISD-KRLIHKDIAARNCLISSDL---  143 (183)
Q Consensus        69 v~e~~~~~~-L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~-~~ivH~di~~~nil~~~~~---  143 (183)
                      +++++..+. ..........             ..+++..+..++.|++.|+.|||+ .||+||||||+|||++..+   
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~  166 (362)
T d1q8ya_         100 VMVFEVLGENLLALIKKYEH-------------RGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE  166 (362)
T ss_dssp             EEEECCCCEEHHHHHHHTTT-------------SCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT
T ss_pred             eeeecccccccccccccccc-------------cCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccc
Confidence            666655444 3333333221             368899999999999999999997 8999999999999997554   


Q ss_pred             ---ceEEecccCCCCCCc--ccccceeeeeecccCCCcccc
Q psy2674         144 ---SVKISLSGLSKDTYQ--KEYYKYRWVICSNIAEGRRLN  179 (183)
Q Consensus       144 ---~~ki~dfg~a~~~~~--~~~~~~~~~~~pe~~~~~~~~  179 (183)
                         .++++|||.|.....  ....+++.|+|||++.+.+|+
T Consensus       167 ~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~  207 (362)
T d1q8ya_         167 NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWG  207 (362)
T ss_dssp             TEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCC
T ss_pred             ccceeeEeecccccccccccccccccccccChhhccccCCC
Confidence               489999999975443  356679999999999887775

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.86  E-value=8.6e-22  Score=135.53  Aligned_cols=128  Identities=14%  Similarity=0.083  Sum_probs=97.9

Q ss_pred             CCCCCceeeeccCCCCcceEEEeeccCCCC-----------------HHHHHHHHHHHHHHhcCCCcceeeEEeEEecCC
Q psy2674           2 SLIPNARGLKASDPQDTSVLMAKSLVHSKD-----------------DEALHEFKREIDLFCKLDHAHVVKMIGICRDGD   64 (183)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~vavK~~~~~~~-----------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~   64 (183)
                      |.-++|.||+|.+. +|++||+|++.....                 ........+|...+..+.|.+++..+++.    
T Consensus         9 G~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~----   83 (191)
T d1zara2           9 GEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE----   83 (191)
T ss_dssp             EECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE----
T ss_pred             eeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec----
Confidence            55678999999874 689999998652110                 11223456788899999999998887663    


Q ss_pred             ccEEEEeeCCCCCHHHHHHhhccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCceecccccceeEeccCCc
Q psy2674          65 PHYLLLEYTDWGDLKQFLLATRKDSKDKSGSGKPRVRSLSTSQAVTMAYQVALGLEHISDKRLIHKDIAARNCLISSDLS  144 (183)
Q Consensus        65 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~ivH~di~~~nil~~~~~~  144 (183)
                      ..+++||++++..+.                      .++......++.|++.++.+||++|++||||||+|||++++ .
T Consensus        84 ~~~lvme~~~~~~~~----------------------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~~-~  140 (191)
T d1zara2          84 GNAVLMELIDAKELY----------------------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSEE-G  140 (191)
T ss_dssp             TTEEEEECCCCEEGG----------------------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEETT-E
T ss_pred             CCEEEEEeecccccc----------------------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeCC-C
Confidence            347999999864432                      24445567789999999999999999999999999999865 5


Q ss_pred             eEEecccCCCCCC
Q psy2674         145 VKISLSGLSKDTY  157 (183)
Q Consensus       145 ~ki~dfg~a~~~~  157 (183)
                      ++++|||+|....
T Consensus       141 ~~liDFG~a~~~~  153 (191)
T d1zara2         141 IWIIDFPQSVEVG  153 (191)
T ss_dssp             EEECCCTTCEETT
T ss_pred             EEEEECCCcccCC
Confidence            8899999997554

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.66  E-value=3.2e-08  Score=69.65  Aligned_cols=72  Identities=19%  Similarity=0.098  Sum_probs=47.1

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcC-CCcceeeEEeEEecCCccEEEEeeCCCCCHHH
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKL-DHAHVVKMIGICRDGDPHYLLLEYTDWGDLKQ   80 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~   80 (183)
                      .+++|+..  .++..+.+|......... ...+.+|...+..+ .+-.+.+++.+..+++..+++|++++|.++.+
T Consensus        27 ~~~v~rv~--~~~~~~vlk~~~~~~~~~-~~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~   99 (263)
T d1j7la_          27 PAKVYKLV--GENENLYLKMTDSRYKGT-TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSE   99 (263)
T ss_dssp             SSEEEEEE--CSSCEEEEEEECGGGTTS-TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHH
T ss_pred             CCcEEEEE--eCCCeEEEEEcCCCcccc-hhhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccc
Confidence            35677553  456667777765322111 12466788887776 34446677888888888999999999766643

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=98.35  E-value=1.1e-06  Score=61.23  Aligned_cols=68  Identities=21%  Similarity=0.248  Sum_probs=44.7

Q ss_pred             CceeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC--CcceeeEEeEEecCCccEEEEeeCCCCCH
Q psy2674           6 NARGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD--HAHVVKMIGICRDGDPHYLLLEYTDWGDL   78 (183)
Q Consensus         6 ~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   78 (183)
                      .+.+|+... ..+..+.+|.......    ..+..|...++.+.  ...+.+++....+++..+++|++++|.++
T Consensus        24 ~~~v~r~~~-~~~~~~vlK~~~~~~~----~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          24 DAAVFRLSA-QGRPVLFVKTDLSGAL----NELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             SCEEEEEEC-TTSCCEEEEEECSCTT----SCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             CCeEEEEEe-CCCCEEEEEeCCccCH----hHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecccc
Confidence            355676543 3455678887653322    14667777777662  33356678888888889999999986544

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.11  E-value=9.1e-06  Score=60.38  Aligned_cols=68  Identities=13%  Similarity=0.081  Sum_probs=39.4

Q ss_pred             eeeeccCCCCcceEEEeeccC------CCCHHHHHHHHHHHHHHhcC-CC--cceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674           8 RGLKASDPQDTSVLMAKSLVH------SKDDEALHEFKREIDLFCKL-DH--AHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus         8 ~~~~~~~~~~~~~vavK~~~~------~~~~~~~~~~~~E~~~l~~l-~h--~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      .+|+.....+++.+++|....      ...+...++...|.+.++.+ .+  ..+.+++.+  +++...++||++++..
T Consensus        41 ~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lvmE~L~~~~  117 (392)
T d2pula1          41 YVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTVMEDLSHLK  117 (392)
T ss_dssp             EEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEEECCCTTSE
T ss_pred             eEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEEEeccCCcc
Confidence            367777777788999997532      11111233456678777766 32  345555554  4566789999997544

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.21  E-value=0.00036  Score=50.10  Aligned_cols=65  Identities=11%  Similarity=0.064  Sum_probs=38.4

Q ss_pred             eeeeccCCCCcceEEEeeccCCCCHHHHHHHHHHHHHHhcCCCcce--eeEE-----eEEecCCccEEEEeeCCC
Q psy2674           8 RGLKASDPQDTSVLMAKSLVHSKDDEALHEFKREIDLFCKLDHAHV--VKMI-----GICRDGDPHYLLLEYTDW   75 (183)
Q Consensus         8 ~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i--~~~~-----~~~~~~~~~~lv~e~~~~   75 (183)
                      +||.... .+|..+++|+.......  .+++..|...+..+...++  ....     ..+...+..+.++++++|
T Consensus        37 ~vy~v~~-~dg~~~VlK~~rp~~~s--~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G  108 (325)
T d1zyla1          37 RVYQFQD-EDRRRFVVKFYRPERWT--ADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGG  108 (325)
T ss_dssp             EEEEECC-TTCCCEEEEEECTTTSC--HHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCC
T ss_pred             eeEEEEc-CCCCEEEEEEeCCCCCC--HHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCC
Confidence            4666544 57888999998755432  2357778887777632111  1111     112335567788898875

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.77  E-value=0.0034  Score=46.10  Aligned_cols=54  Identities=17%  Similarity=0.196  Sum_probs=33.3

Q ss_pred             CcceEEEeeccCCCCHHHHHHHHHHHHHHhcCC-CcceeeEEeEEecCCccEEEEeeCCCCC
Q psy2674          17 DTSVLMAKSLVHSKDDEALHEFKREIDLFCKLD-HAHVVKMIGICRDGDPHYLLLEYTDWGD   77 (183)
Q Consensus        17 ~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-h~~i~~~~~~~~~~~~~~lv~e~~~~~~   77 (183)
                      ....|.+++.-......   ...+|..+++.+. +.-..++++++.+    .+++||++|.+
T Consensus        73 ~~~~vllRi~g~~~~~i---dr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I~efi~g~~  127 (395)
T d1nw1a_          73 EPNKVLLRVYFNPETES---HLVAESVIFTLLSERHLGPKLYGIFSG----GRLEEYIPSRP  127 (395)
T ss_dssp             CCSEEEEEEECSCCCHH---HHHHHHHHHHHHHHTTSSSCEEEEETT----EEEECCCCEEE
T ss_pred             CCCcEEEEecCCcchhh---HHHHHHHHHHHHHhCCCCCeEEEEcCC----ceEEEEecccc
Confidence            34567777754322222   3457888888873 4334467777643    68899988643

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.11  E-value=0.00086  Score=47.66  Aligned_cols=30  Identities=17%  Similarity=0.091  Sum_probs=27.3

Q ss_pred             CCceecccccceeEeccCCceEEecccCCC
Q psy2674         125 KRLIHKDIAARNCLISSDLSVKISLSGLSK  154 (183)
Q Consensus       125 ~~ivH~di~~~nil~~~~~~~ki~dfg~a~  154 (183)
                      .|++|+|+.+.|++++.+...-++||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcccccceeEecccccc
Confidence            378999999999999988888999999885