Psyllid ID: psy2787

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-
Protein Sequence
MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPL
Secondary Structure (PSIPRED)
ccccccccccHHHHHHccccccccHHHHHHHHHHcccccHHHHccccccccccccccEEEccccccccccccEEEcccccccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHcHHHHHHHHcccccccccccccccccEEEEEcccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccHHccccHHHHHHcccccccccHHHHHHHHHHHcccHHHHHHHHHcEEEEccccEEEEccccccccccccccccccccccccccccHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHccccHHHcccHHHHHHHHHHHccccHHHHHHcccccccccccccccccEEEEcccccHHcccccccccccccccccccEEHcccccHHHccccc
Coil and Loop (DISEMBL)
MSANFAELNAFqenytepcrkplpperrgygtfsvnnicscqfssssLLILFFsssssssgdfgmmrysqndcyvmterkplpcpwcpmeslkhnqfsqasdawMFGVTIWEMFtfgaepwvglngMQILQKIDregerlprpeacpvEVYALMRQCwsknpaerpkfstlkdCLYRLTPAVMKATQncheideegklyidagdqiviiegdpechwwkgqnlstfnigmfprnimdpmrrkqpddisrpl
Flexible Loop (DISEMBL)
msanfaelnafqenytepcrkplPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSknpaerpkfstLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNimdpmrrkqpddisrpl
Low Complexity Region (SEG)
MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQfssssllilffsssssssGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPL
Disordered region (IsUnstruct)
****************************GYGTFSVNNICSCQFSSSSLLILFFS********FGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN*****************
Disordered Region (DISOPRED)
MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMK***************IDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIM***************
Disordered Region (DISEMBL)
MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR**********
Disordered Region (DISPRO)
****FAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	251	2.2.26 [Sep-21-2011]
Q17R13	1039	Activated CDC42 kinase 1	yes	N/A	0.868	0.209	0.471	3e-55
O54967	1055	Activated CDC42 kinase 1	yes	N/A	0.792	0.188	0.504	4e-55
Q5U2X5	1040	Activated CDC42 kinase 1	yes	N/A	0.792	0.191	0.514	5e-55
Q07912	1038	Activated CDC42 kinase 1	yes	N/A	0.792	0.191	0.504	6e-55
Q99ML2	666	Non-receptor tyrosine-pro	no	N/A	0.717	0.270	0.416	9e-37
Q13470	666	Non-receptor tyrosine-pro	no	N/A	0.705	0.265	0.416	2e-36
Q10925	1237	Probable tyrosine-protein	no	N/A	0.673	0.136	0.418	1e-35
Q9I7F7	1337	Tyrosine-protein kinase P	no	N/A	0.725	0.136	0.382	4e-30
Q91738	1068	Focal adhesion kinase 1 O	N/A	N/A	0.498	0.117	0.396	2e-24
Q9H3Y6	488	Tyrosine-protein kinase S	no	N/A	0.482	0.247	0.423	2e-24

>sp|Q17R13|ACK1_BOVIN Activated CDC42 kinase 1 OS=Bos taurus GN=TNK2 PE=1 SV=1

 Score =  214 bits (546), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 106/225 (47%), Positives = 136/225 (60%), Gaps = 7/225 (3%)

Query: 29  GYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPW 86
           G G            ++ +LL+   +      GDFG+MR     +D YVM E + +P  W
Sbjct: 239 GMGYLEAKRFIHRDLAARNLLLA--TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW 296

Query: 87  CPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEAC 146
           C  ESLK   FS ASD WMFGVT+WEMFT+G EPW+GLNG QIL KID+EGERLPRPE C
Sbjct: 297 CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 356

Query: 147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQI 206
           P ++Y +M QCW+  P +RP F  L+D L    P  M+A Q+  E D   KL+I   D I
Sbjct: 357 PQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVI 413

Query: 207 VIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRPL 251
            +IEG  E +WW+GQN  T  +G FPRN++  +      DIS+PL
Sbjct: 414 TVIEGRAENYWWRGQNTRTLCVGPFPRNVVTSVAGLSAQDISQPL 458

Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.
Bos taurus (taxid: 9913)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O54967|ACK1_MOUSE Activated CDC42 kinase 1 OS=Mus musculus GN=Tnk2 PE=1 SV=2

 Score =  214 bits (546), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 103/204 (50%), Positives = 130/204 (63%), Gaps = 5/204 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  +      GDFG+MR     +D YVM E + +P  WC  ESLK   FS ASD WMFG
Sbjct: 258 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 317

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEMFT+G EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP 
Sbjct: 318 VTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 377

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  
Sbjct: 378 FVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLC 434

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           +G FPRN++  +      DIS+PL
Sbjct: 435 VGPFPRNVVTSVAGLSAQDISQPL 458

Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5U2X5|ACK1_RAT Activated CDC42 kinase 1 OS=Rattus norvegicus GN=Tnk2 PE=2 SV=1

 Score =  214 bits (545), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 105/204 (51%), Positives = 131/204 (64%), Gaps = 5/204 (2%)

Query: 50  ILFFSSSSSSSGDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  +      GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFG
Sbjct: 258 LLLATRDLVKIGDFGLMRALPQNDGHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 317

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEMFT+G EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP 
Sbjct: 318 VTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 377

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  
Sbjct: 378 FVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLC 434

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           +G FPRN++  +      DIS+PL
Sbjct: 435 VGPFPRNVVTSVAGLSAQDISQPL 458

Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q07912|ACK1_HUMAN Activated CDC42 kinase 1 OS=Homo sapiens GN=TNK2 PE=1 SV=3

 Score =  214 bits (544), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 103/204 (50%), Positives = 130/204 (63%), Gaps = 5/204 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  +      GDFG+MR     +D YVM E + +P  WC  ESLK   FS ASD WMFG
Sbjct: 258 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFG 317

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEMFT+G EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP 
Sbjct: 318 VTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT 377

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F  L+D L    P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  
Sbjct: 378 FVALRDFLLEAQPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLC 434

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           +G FPRN++  +      DIS+PL
Sbjct: 435 VGPFPRNVVTSVAGLSAQDISQPL 458

Non-receptor tyrosine-protein and serine/threonine-protein kinase that is implicated in cell spreading and migration, cell survival, cell growth and proliferation. Transduces extracellular signals to cytosolic and nuclear effectors. Phosphorylates AKT1, AR, MCF2, WASL and WWOX. Implicated in trafficking and clathrin-mediated endocytosis through binding to epidermal growth factor receptor (EGFR) and clathrin. Binds to both poly- and mono-ubiquitin and regulates ligand-induced degradation of EGFR, thereby contributing to the accumulation of EGFR at the limiting membrane of early endosomes. Downstream effector of CDC42 which mediates CDC42-dependent cell migration via phosphorylation of BCAR1. May be involved both in adult synaptic function and plasticity and in brain development. Activates AKT1 by phosphorylating it on 'Tyr-176'. Phosphorylates AR on 'Tyr-267' and 'Tyr-363' thereby promoting its recruitment to androgen-responsive enhancers (AREs). Phosphorylates WWOX on 'Tyr-287'. Phosphorylates MCF2, thereby enhancing its activity as a guanine nucleotide exchange factor (GEF) toward Rho family proteins. Contributes to the control of AXL receptor levels. Confers metastatic properties on cancer cells and promotes tumor growth by negatively regulating tumor suppressor such as WWOX and positively regulating pro-survival factors such as AKT1 and AR.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q99ML2|TNK1_MOUSE Non-receptor tyrosine-protein kinase TNK1 OS=Mus musculus GN=Tnk1 PE=1 SV=2

 Score =  153 bits (387), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 77/185 (41%), Positives = 106/185 (57%), Gaps = 5/185 (2%)

Query: 50  ILFFSSSSSSSGDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  S       DFG++R        YVM   +P+P  WC  ESL+   FS ASD WMFG
Sbjct: 251 LLLASPRMIKVADFGLVRPLGGARGRYVMGGPRPIPYAWCAPESLRQGAFSSASDVWMFG 310

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEMF+ G EPW G+    ILQ+++++  RLP+P  C   +Y+L  +CW+ +PA+RP 
Sbjct: 311 VTLWEMFSGGEEPWAGVPPYLILQRLEKDRARLPKPPLCSRALYSLALRCWAPHPADRPS 370

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           FS L+  L     A +   +   E+ E G L ++ GD I IIEG  +   WKGQN  T  
Sbjct: 371 FSNLEGLLQE---AWLSEGRCVREVTEPGALRMEPGDPITIIEGSLDTATWKGQNGRTLK 427

Query: 228 IGMFP 232
           +G FP
Sbjct: 428 VGNFP 432

May function in signaling pathways utilized broadly during fetal development and more selectively in adult tissues and in cells of the lymphohematopoietic system. Could specifically be involved in phospholipid signal transduction (By similarity). Involved in negative regulation of cell growth. Has tumor suppressor properties. Plays a negative regulatory role in the Ras-MAPK pathway.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q13470|TNK1_HUMAN Non-receptor tyrosine-protein kinase TNK1 OS=Homo sapiens GN=TNK1 PE=1 SV=3

 Score =  152 bits (385), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 110/192 (57%), Gaps = 15/192 (7%)

Query: 50  ILFFSSSSSSSGDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  S  +    DFG++R        YVM   +P+P  WC  ESL+H  FS ASD WMFG
Sbjct: 251 LLLASPRTIKVADFGLVRPLGGARGRYVMGGPRPIPYAWCAPESLRHGAFSSASDVWMFG 310

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEMF+ G EPW G+    ILQ+++ +  RLPRP  C   +Y+L  +CW+ +PA+RP 
Sbjct: 311 VTLWEMFSGGEEPWAGVPPYLILQRLE-DRARLPRPPLCSRALYSLALRCWAPHPADRPS 369

Query: 168 FSTLKDCLYRLTPAVMKATQNC--HEIDEEGKLYIDAGDQIVIIEG-----DPECHWWKG 220
           FS L+  L    P     ++ C   ++ E G L ++ GD I +IEG      P+   WKG
Sbjct: 370 FSHLEGLLQEAGP-----SEACCVRDVTEPGALRMETGDPITVIEGSSSFHSPDSTIWKG 424

Query: 221 QNLSTFNIGMFP 232
           QN  TF +G FP
Sbjct: 425 QNGRTFKVGSFP 436

Involved in negative regulation of cell growth. Has tumor suppressor properties. Plays a negative regulatory role in the Ras-MAPK pathway. May function in signaling pathways utilized broadly during fetal development and more selectively in adult tissues and in cells of the lymphohematopoietic system. Could specifically be involved in phospholipid signal transduction.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q10925|KIN25_CAEEL Probable tyrosine-protein kinase kin-25 OS=Caenorhabditis elegans GN=kin-25 PE=2 SV=2

 Score =  149 bits (377), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 106/179 (59%), Gaps = 10/179 (5%)

Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+MR  + +   Y M  +K +P  WCP E+L+H +FS ASD W +GVTIWE+FTFG E
Sbjct: 249 DFGLMRALKENEQMYTMAPQKKVPFAWCPPEALRHRKFSHASDVWSYGVTIWEVFTFGEE 308

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR-- 177
           PWVG   + +L+ ID  GERL +P+ C   +Y +M+ CW  NPAER KF  +++ L    
Sbjct: 309 PWVGCRAIDVLKNID-AGERLEKPKYCSERIYQIMKNCWKFNPAERCKFGAIREDLVAAM 367

Query: 178 LTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIM 236
              AV + T N     + G L +  GD++V++E       W GQN      G FPR+++
Sbjct: 368 FLDAVARETYNS---IQPGALQLTKGDEVVVVEN--TGQDWFGQNKKNQKFGTFPRSVV 421

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q9I7F7|PR2_DROME Tyrosine-protein kinase PR2 OS=Drosophila melanogaster GN=PR2 PE=1 SV=3

 Score =  131 bits (330), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/196 (38%), Positives = 107/196 (54%), Gaps = 14/196 (7%)

Query: 50  ILFFSSSSSSSGDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASD 102
           IL FS       DFG+ R       Y + +  V  +   LP  WC  E + + +F+ ASD
Sbjct: 266 ILVFSKDKVKISDFGLSRALGVGKDYYKTNFNVNLK---LPIAWCAPECINYLRFTNASD 322

Query: 103 AWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVYALMRQCWSKN 161
            W FGV +WEMF++G +PW  L G+QIL+ ID    +RL +P+ CP E Y LM +CW  +
Sbjct: 323 VWAFGVCLWEMFSYGFQPWAALTGLQILEAIDAPNYQRLEQPDCCPSEYYTLMMKCWQDD 382

Query: 162 PAERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQ 221
            A+RP+F  + D L  + P  +KA  NC E  ++  LY   GD I +++ +    +WKG 
Sbjct: 383 AAKRPRFGEIYDQLPDMKPEQLKAVVNCTEPKKDHLLY-RQGDIISVLDRNTGTPFWKGV 441

Query: 222 NLSTFNIGMF-PRNIM 236
            LST   G F P N +
Sbjct: 442 -LSTGKTGYFNPSNTV 456

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q91738|FAK1_XENLA Focal adhesion kinase 1 OS=Xenopus laevis GN=ptk2 PE=2 SV=2

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 1/126 (0%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L  SS     GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV 
Sbjct: 565 VLVSSSDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 624

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
           +WE+  +G +P+ G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+
Sbjct: 625 MWEILMYGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 683

Query: 170 TLKDCL 175
            LK  L
Sbjct: 684 ELKAQL 689

Non-receptor protein-tyrosine kinase implicated in signaling pathways involved in cell motility, proliferation and apoptosis. Activated by tyrosine-phosphorylation in response to either integrin clustering induced by cell adhesion or antibody cross-linking, or via G-protein coupled receptor (GPCR) occupancy by ligands such as bombesin or lysophosphatidic acid, or via LDL receptor occupancy. Microtubule-induced dephosphorylation at Tyr-397 is crucial for the induction of focal adhesion disassembly.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

>sp|Q9H3Y6|SRMS_HUMAN Tyrosine-protein kinase Srms OS=Homo sapiens GN=SRMS PE=2 SV=1

 Score =  112 bits (281), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 55/130 (42%), Positives = 75/130 (57%), Gaps = 9/130 (6%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  ++D Y  +    +P  W   E+  +  FSQ SD W FGV + E+FT+G  P
Sbjct: 367 ADFGLARLLKDDIYSPSSSSKIPVKWTAPEAANYRVFSQKSDVWSFGVLLHEVFTYGQCP 426

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   + LQ+I R G RLPRP ACP EVY LM +CW  +P ERP F+TL++ L+    
Sbjct: 427 YEGMTNHETLQQIMR-GYRLPRPAACPAEVYVLMLECWRSSPEERPSFATLREKLH---- 481

Query: 181 AVMKATQNCH 190
               A   CH
Sbjct: 482 ----AIHRCH 487

May be involved in proliferation or differentiation of keratinocytes in the skin.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 0

EC: .

EC: 2

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
383854452	1255	PREDICTED: uncharacterized protein LOC10	0.792	0.158	0.598	2e-68
345480556	1308	PREDICTED: activated CDC42 kinase 1-like	0.792	0.152	0.598	2e-68
307207705	1463	Activated CDC42 kinase 1 [Harpegnathos s	0.749	0.128	0.626	5e-68
332030748	1498	Activated CDC42 kinase 1 [Acromyrmex ech	0.749	0.125	0.601	3e-65
380018959	1245	PREDICTED: uncharacterized protein LOC10	0.800	0.161	0.568	3e-65
328788715	1238	PREDICTED: hypothetical protein LOC41305	0.800	0.162	0.568	5e-65
322789077	622	hypothetical protein SINV_07793 [Solenop	0.792	0.319	0.588	5e-65
340726655	1251	PREDICTED: hypothetical protein LOC10064	0.792	0.159	0.568	3e-64
350418446	1251	PREDICTED: hypothetical protein LOC10074	0.792	0.159	0.563	4e-64
91089789	1000	PREDICTED: similar to protein kinase pro	0.792	0.199	0.568	7e-63

>gi|383854452|ref|XP_003702735.1| PREDICTED: uncharacterized protein LOC100875070 [Megachile rotundata]

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/204 (59%), Positives = 149/204 (73%), Gaps = 5/204 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  +      GDFG+MR    Q DCYVMTE K +P PWC  ESLK  QFS ASD WMFG
Sbjct: 242 VLLSTVDKVKIGDFGLMRALPQQEDCYVMTEHKKVPFPWCAPESLKARQFSHASDVWMFG 301

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEM TFG EPWVGLNG +IL+KIDREGERL  PEA P  +Y LM +CW++ P+ERP 
Sbjct: 302 VTLWEMLTFGEEPWVGLNGSEILRKIDREGERLHEPEATPPVMYQLMLRCWAREPSERPT 361

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F++L+  L  + PAVMKA  +  E D   K+ I+ GDQIVI++G PE +WWKGQN  TF 
Sbjct: 362 FASLRTSLTGMVPAVMKAVNHFEETD---KMTIEQGDQIVILDGRPENYWWKGQNQRTFQ 418

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           IG+FPR ++DPMRRKQP+DIS+PL
Sbjct: 419 IGLFPRCLVDPMRRKQPEDISKPL 442

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345480556|ref|XP_001604712.2| PREDICTED: activated CDC42 kinase 1-like [Nasonia vitripennis]

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 122/204 (59%), Positives = 150/204 (73%), Gaps = 5/204 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  S      GDFG+MR    Q DCYVMTE K +P PWC  ESLK  QFS ASD WMFG
Sbjct: 242 VLLSSVDKIKIGDFGLMRALPQQEDCYVMTEHKKVPFPWCAPESLKARQFSHASDVWMFG 301

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEM TFG EPWVGLNG +IL+KIDREGERL  PEA P  ++ LM  CW+++PAERP 
Sbjct: 302 VTLWEMLTFGEEPWVGLNGSEILKKIDREGERLHEPEASPPAMFQLMLHCWARDPAERPT 361

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F++LK+ L  + P+VMKA    +  DE  K+ I+ GDQIVII+G PE +WWKGQN  TF 
Sbjct: 362 FASLKESLTGMVPSVMKA---LNRFDEPDKMMIEHGDQIVIIDGRPENYWWKGQNQRTFQ 418

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           +G+FPR ++DPMR+KQP+DIS+PL
Sbjct: 419 VGVFPRCLVDPMRKKQPEDISKPL 442

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307207705|gb|EFN85342.1| Activated CDC42 kinase 1 [Harpegnathos saltator]

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 121/193 (62%), Positives = 145/193 (75%), Gaps = 5/193 (2%)

Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR    Q DCYVMTE K +P PWC  ESLK  QFS ASD WMFGVT+WEM TFG 
Sbjct: 294 GDFGLMRALPQQEDCYVMTEHKKVPFPWCAPESLKARQFSHASDVWMFGVTLWEMLTFGE 353

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           EPW+GLNG +IL+KIDREGERL  PEA P  VY LM +CWS+ P+ERP F +LK+ L  +
Sbjct: 354 EPWLGLNGSEILRKIDREGERLHEPEATPPFVYELMLRCWSREPSERPTFGSLKESLTGM 413

Query: 179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
            PAVMKA    +  +E GK+ I++GDQIVII+G  E +WWKGQN  TF +  FPR ++DP
Sbjct: 414 MPAVMKA---VNAFEEAGKMSIESGDQIVIIDGRSENYWWKGQNQRTFQVAHFPRCLVDP 470

Query: 239 MRRKQPDDISRPL 251
           MRRKQP+DIS+PL
Sbjct: 471 MRRKQPEDISKPL 483

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332030748|gb|EGI70424.1| Activated CDC42 kinase 1 [Acromyrmex echinatior]

 Score =  254 bits (649), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 116/193 (60%), Positives = 142/193 (73%), Gaps = 5/193 (2%)

Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR    Q DCYVMTE K +P PWC  ESLK   FS ASD WMF VT+WEM TFG 
Sbjct: 253 GDFGLMRALPQQEDCYVMTEHKKVPFPWCAPESLKARHFSHASDVWMFAVTLWEMLTFGE 312

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           EPW+GLNG +IL+KIDREGERL +PEA P  +Y LM +CW++ P+ERP F++LK+ L  +
Sbjct: 313 EPWIGLNGSEILRKIDREGERLHKPEAMPPYMYELMLRCWAREPSERPTFASLKESLTGM 372

Query: 179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
            P+VMKA     E D   K+ I++GDQI II+G  E +WWKGQN  TF I  FPR ++DP
Sbjct: 373 VPSVMKALTTFEETD---KMSIESGDQIAIIDGRSENYWWKGQNQRTFQIAHFPRCLVDP 429

Query: 239 MRRKQPDDISRPL 251
           MRRKQP+DIS+PL
Sbjct: 430 MRRKQPEDISKPL 442

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380018959|ref|XP_003693386.1| PREDICTED: uncharacterized protein LOC100866491 [Apis florea]

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 116/204 (56%), Positives = 147/204 (72%), Gaps = 3/204 (1%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  S      GDFG+MR    Q DCYVM+E K +P PWC  ESLK  +F+ ASD WMFG
Sbjct: 240 VLLSSIDKVKIGDFGLMRALPQQEDCYVMSEHKKVPFPWCAPESLKRRKFTHASDVWMFG 299

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEM TFG EPWVGL G +IL+KID+EGERL  PEA P E+Y LM +CW+ +P+ERP 
Sbjct: 300 VTLWEMLTFGEEPWVGLKGSEILRKIDKEGERLHEPEATPPEMYQLMLRCWACDPSERPT 359

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F++L+  L  + P VMKA  +   + + GK+ I  GDQI+I++G PE +WWKGQN  TF 
Sbjct: 360 FASLRVSLTSMVPTVMKAI-SSFAVSDPGKMTIKQGDQIIILDGQPENYWWKGQNQRTFQ 418

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           IG+FPR  +DPMRRKQP+DIS+PL
Sbjct: 419 IGLFPRCYVDPMRRKQPEDISKPL 442

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328788715|ref|XP_396503.4| PREDICTED: hypothetical protein LOC413052 [Apis mellifera]

 Score =  253 bits (647), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 116/204 (56%), Positives = 147/204 (72%), Gaps = 3/204 (1%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  S      GDFG+MR    Q DCYVM+E K +P PWC  ESLK  +F+ ASD WMFG
Sbjct: 240 VLLSSIDKVKIGDFGLMRALPQQEDCYVMSEHKKVPFPWCAPESLKRRKFTHASDVWMFG 299

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEM TFG EPWVGL G +IL+KID+EGERL  PEA P E+Y LM +CW+ +P+ERP 
Sbjct: 300 VTLWEMLTFGEEPWVGLKGSEILRKIDKEGERLHEPEATPPEMYQLMLRCWACDPSERPT 359

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F++L+  L  + P VMKA  +   + + GK+ I  GDQI+I++G PE +WWKGQN  TF 
Sbjct: 360 FASLRVSLTSMVPTVMKAI-SSFAVSDPGKMTIKQGDQIIILDGQPENYWWKGQNQRTFQ 418

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           IG+FPR  +DPMRRKQP+DIS+PL
Sbjct: 419 IGLFPRCYVDPMRRKQPEDISKPL 442

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322789077|gb|EFZ14520.1| hypothetical protein SINV_07793 [Solenopsis invicta]

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 120/204 (58%), Positives = 146/204 (71%), Gaps = 5/204 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  +      GDFG+MR    Q DCYVMTE K +P PWC  ESLK   FS ASD WMFG
Sbjct: 242 VLLSTIDKIKIGDFGLMRALPQQEDCYVMTEHKKVPFPWCAPESLKARHFSHASDVWMFG 301

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEM TFG EPW+GLNG +IL+KIDREGERL  PEA P  +Y LM  CW++ P+ERP 
Sbjct: 302 VTLWEMLTFGEEPWLGLNGSEILRKIDREGERLYEPEAMPPYMYKLMLHCWAREPSERPT 361

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F++LK+ L  + P+VMKA       +E GK+ I+ GDQIVII+G  E +WWKGQN  TF 
Sbjct: 362 FASLKESLTGMVPSVMKALT---AFEETGKMSIEPGDQIVIIDGRSENYWWKGQNQRTFQ 418

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           IG FPR ++DPMRRKQP+DIS+PL
Sbjct: 419 IGHFPRCLVDPMRRKQPEDISKPL 442

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340726655|ref|XP_003401670.1| PREDICTED: hypothetical protein LOC100647202 [Bombus terrestris]

 Score =  251 bits (640), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 116/204 (56%), Positives = 144/204 (70%), Gaps = 5/204 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  S      GDFG+MR    Q DCYVMTE K +P PWC  ESLK  +FS ASD WMFG
Sbjct: 242 VLLSSVDKVKIGDFGLMRALPQQEDCYVMTEHKKVPFPWCAPESLKARKFSHASDVWMFG 301

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEM TFG EPWVGL G +IL+KID++GERL  PEA P ++Y LM +CW++ P+ERP 
Sbjct: 302 VTLWEMLTFGEEPWVGLKGSEILRKIDKDGERLHEPEATPPDMYQLMLRCWAREPSERPT 361

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F++LK  L  + P VMKA          GK+ I+ GDQIVI++G PE +WWKGQN  +F 
Sbjct: 362 FASLKSSLTGMVPTVMKA---ISHFTMAGKMTIEQGDQIVILDGRPENYWWKGQNQRSFQ 418

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           IG+FPR  +DPMRRKQ +DIS+PL
Sbjct: 419 IGLFPRCFVDPMRRKQREDISKPL 442

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350418446|ref|XP_003491859.1| PREDICTED: hypothetical protein LOC100747574 [Bombus impatiens]

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 115/204 (56%), Positives = 144/204 (70%), Gaps = 5/204 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  S      GDFG+MR    Q DCYVMTE K +P PWC  ESLK  +FS ASD WMFG
Sbjct: 242 VLLSSVDKVKIGDFGLMRALPQQEDCYVMTEHKKVPFPWCAPESLKARKFSHASDVWMFG 301

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEM TFG EPW+GL G +IL+KID++GERL  PEA P ++Y LM +CW++ P+ERP 
Sbjct: 302 VTLWEMLTFGEEPWIGLKGSEILRKIDKDGERLHEPEATPPDMYQLMLRCWAREPSERPT 361

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F++LK  L  + P VMKA          GK+ I+ GDQIVI++G PE +WWKGQN  +F 
Sbjct: 362 FASLKSSLTGMVPTVMKA---ISHFTMAGKMTIEQGDQIVILDGRPENYWWKGQNQRSFQ 418

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           IG+FPR  +DPMRRKQ +DIS+PL
Sbjct: 419 IGLFPRCFVDPMRRKQREDISKPL 442

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91089789|ref|XP_968303.1| PREDICTED: similar to protein kinase protein [Tribolium castaneum] gi|270013600|gb|EFA10048.1| hypothetical protein TcasGA2_TC012222 [Tribolium castaneum]

 Score =  246 bits (628), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 116/204 (56%), Positives = 144/204 (70%), Gaps = 5/204 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  S+     GDFG+MR    + DCYVMTE K +P PWC  ESL+  QFS ASD WMFG
Sbjct: 243 VLLASADKIKIGDFGLMRALPQEEDCYVMTEHKKVPFPWCAPESLRSRQFSHASDTWMFG 302

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEMFTFG +PW+GL G +IL+KID+EGERL +PEACP  VY+++ QCW KNP ERP 
Sbjct: 303 VTVWEMFTFGEDPWMGLIGSEILRKIDKEGERLHQPEACPPAVYSILLQCWLKNPTERPT 362

Query: 168 FSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN 227
           F+ LK+   +    VMKA       DE  KL I+ GD+I II+G  E +WWKGQN  TF 
Sbjct: 363 FAALKEFFRKNKTPVMKAVGGQ---DEPNKLKIEEGDEIAIIDGSAELYWWKGQNQRTFE 419

Query: 228 IGMFPRNIMDPMRRKQPDDISRPL 251
           IG+F R ++DPMR KQP+DIS+PL
Sbjct: 420 IGLFARCLVDPMRPKQPEDISKPL 443

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	251
FB|FBgn0028484	1073	Ack "Activated Cdc42 kinase" [	0.733	0.171	0.566	9.7e-55
UNIPROTKB|I3LH58	673	TNK2 "Uncharacterized protein"	0.749	0.279	0.544	3e-53
UNIPROTKB|F6PN06	828	BT.64988 "Uncharacterized prot	0.749	0.227	0.538	9.5e-53
UNIPROTKB|E2RFP7	1041	TNK2 "Uncharacterized protein"	0.749	0.180	0.544	2.7e-52
UNIPROTKB|D4A6C1	1008	Tnk2 "Activated CDC42 kinase 1	0.749	0.186	0.538	3e-52
UNIPROTKB|Q07912	1038	TNK2 "Activated CDC42 kinase 1	0.749	0.181	0.538	3.4e-52
UNIPROTKB|F1MSL0	1039	TNK2 "Activated CDC42 kinase 1	0.749	0.180	0.538	3.4e-52
UNIPROTKB|Q17R13	1039	TNK2 "Activated CDC42 kinase 1	0.749	0.180	0.538	3.4e-52
UNIPROTKB|C9J1X3	1040	TNK2 "Activated CDC42 kinase 1	0.749	0.180	0.538	3.4e-52
RGD|1305957	1040	Tnk2 "tyrosine kinase, non-rec	0.749	0.180	0.538	3.4e-52

FB|FBgn0028484 Ack "Activated Cdc42 kinase" [Drosophila melanogaster (taxid:7227)]

 Score = 574 (207.1 bits), Expect = 9.7e-55, P = 9.7e-55
 Identities = 107/189 (56%), Positives = 139/189 (73%)

Query:    61 GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR    ++DCYVM+E K +P PWC  ESL+  QFS ASD WMFGVT+WEMF+FG 
Sbjct:   267 GDFGLMRALPQEDDCYVMSEHKKVPFPWCAPESLRFRQFSHASDTWMFGVTLWEMFSFGE 326

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             +PWVGLNG QIL+KIDREGERL +P+ACP +VYA+M QCW K PAERP F+ LK+ L  +
Sbjct:   327 DPWVGLNGSQILRKIDREGERLHQPDACPPDVYAMMLQCWDKTPAERPTFAALKEYLASM 386

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
             +P VM+A+++ HE   +G L I+ GD I II+G  E    KGQN  TF+IG+FPRN+++ 
Sbjct:   387 SPPVMRASRSHHE--SKG-LQIEPGDTIAIIDGRHELKLIKGQNQRTFDIGIFPRNLLEQ 443

Query:   239 MRRKQPDDI 247
              +     D+
Sbjct:   444 RKVGAAGDV 452

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=ISS

GO:0005737 "cytoplasm" evidence=ISS

GO:0042169 "SH2 domain binding" evidence=IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA;NAS

GO:0006468 "protein phosphorylation" evidence=IDA;NAS

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0007391 "dorsal closure" evidence=IMP

GO:0005524 "ATP binding" evidence=IEA

GO:0043066 "negative regulation of apoptotic process" evidence=IGI

UNIPROTKB|I3LH58 TNK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 551 (199.0 bits), Expect = 3.0e-53, P = 3.0e-53
 Identities = 105/193 (54%), Positives = 128/193 (66%)

Query:    61 GDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct:   259 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 318

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             EPW+GLNG QIL KID+EGERLPRPE CP +VY +M QCW+  P +RP F  L+D L   
Sbjct:   319 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDVYNVMVQCWAHKPEDRPTFVALRDFLLEA 378

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
              P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++  
Sbjct:   379 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVVTS 435

Query:   239 MRRKQPDDISRPL 251
             +      DIS+PL
Sbjct:   436 VAGLSAQDISQPL 448

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|F6PN06 BT.64988 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 550 (198.7 bits), Expect = 9.5e-53, P = 9.5e-53
 Identities = 104/193 (53%), Positives = 128/193 (66%)

Query:    61 GDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct:   269 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 328

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct:   329 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 388

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
              P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++  
Sbjct:   389 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVVTS 445

Query:   239 MRRKQPDDISRPL 251
             +      DIS+PL
Sbjct:   446 VAGLSAQDISQPL 458

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|E2RFP7 TNK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 551 (199.0 bits), Expect = 2.7e-52, P = 2.7e-52
 Identities = 105/193 (54%), Positives = 128/193 (66%)

Query:    61 GDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct:   269 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 328

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             EPW+GLNG QIL KID+EGERLPRPE CP +VY +M QCW+  P +RP F  L+D L   
Sbjct:   329 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDVYNVMVQCWAHKPEDRPTFVALRDFLLEA 388

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
              P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++  
Sbjct:   389 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVVTS 445

Query:   239 MRRKQPDDISRPL 251
             +      DIS+PL
Sbjct:   446 VAGLSAQDISQPL 458

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

UNIPROTKB|D4A6C1 Tnk2 "Activated CDC42 kinase 1" [Rattus norvegicus (taxid:10116)]

 Score = 550 (198.7 bits), Expect = 3.0e-52, P = 3.0e-52
 Identities = 104/193 (53%), Positives = 128/193 (66%)

Query:    61 GDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct:   269 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 328

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct:   329 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 388

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
              P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++  
Sbjct:   389 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVVTS 445

Query:   239 MRRKQPDDISRPL 251
             +      DIS+PL
Sbjct:   446 VAGLSAQDISQPL 458

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q07912 TNK2 "Activated CDC42 kinase 1" [Homo sapiens (taxid:9606)]

 Score = 550 (198.7 bits), Expect = 3.4e-52, P = 3.4e-52
 Identities = 104/193 (53%), Positives = 128/193 (66%)

Query:    61 GDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct:   269 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 328

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct:   329 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 388

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
              P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++  
Sbjct:   389 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVVTS 445

Query:   239 MRRKQPDDISRPL 251
             +      DIS+PL
Sbjct:   446 VAGLSAQDISQPL 458

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IDA

GO:0016310 "phosphorylation" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005768 "endosome" evidence=ISS

GO:0005634 "nucleus" evidence=IDA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IDA

GO:0007166 "cell surface receptor signaling pathway" evidence=TAS

GO:2000369 "regulation of clathrin-mediated endocytosis" evidence=IDA

GO:0030136 "clathrin-coated vesicle" evidence=IDA

GO:0005905 "coated pit" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005095 "GTPase inhibitor activity" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0050699 "WW domain binding" evidence=ISS

GO:0005154 "epidermal growth factor receptor binding" evidence=IDA

GO:0070436 "Grb2-EGFR complex" evidence=IDA

UNIPROTKB|F1MSL0 TNK2 "Activated CDC42 kinase 1" [Bos taurus (taxid:9913)]

 Score = 550 (198.7 bits), Expect = 3.4e-52, P = 3.4e-52
 Identities = 104/193 (53%), Positives = 128/193 (66%)

Query:    61 GDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct:   269 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 328

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct:   329 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 388

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
              P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++  
Sbjct:   389 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVVTS 445

Query:   239 MRRKQPDDISRPL 251
             +      DIS+PL
Sbjct:   446 VAGLSAQDISQPL 458

GO:2000369 "regulation of clathrin-mediated endocytosis" evidence=IEA

GO:0070436 "Grb2-EGFR complex" evidence=IEA

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0030426 "growth cone" evidence=IEA

GO:0030425 "dendrite" evidence=IEA

GO:0030424 "axon" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0005905 "coated pit" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005154 "epidermal growth factor receptor binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q17R13 TNK2 "Activated CDC42 kinase 1" [Bos taurus (taxid:9913)]

 Score = 550 (198.7 bits), Expect = 3.4e-52, P = 3.4e-52
 Identities = 104/193 (53%), Positives = 128/193 (66%)

Query:    61 GDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct:   269 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 328

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct:   329 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 388

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
              P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++  
Sbjct:   389 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVVTS 445

Query:   239 MRRKQPDDISRPL 251
             +      DIS+PL
Sbjct:   446 VAGLSAQDISQPL 458

GO:0005515 "protein binding" evidence=IPI

GO:0005737 "cytoplasm" evidence=ISS

GO:0005634 "nucleus" evidence=ISS

GO:0016310 "phosphorylation" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISS

GO:0005768 "endosome" evidence=ISS

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0030136 "clathrin-coated vesicle" evidence=IEA

GO:0005912 "adherens junction" evidence=IEA

GO:0005905 "coated pit" evidence=IEA

GO:0004715 "non-membrane spanning protein tyrosine kinase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006897 "endocytosis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|C9J1X3 TNK2 "Activated CDC42 kinase 1" [Homo sapiens (taxid:9606)]

 Score = 550 (198.7 bits), Expect = 3.4e-52, P = 3.4e-52
 Identities = 104/193 (53%), Positives = 128/193 (66%)

Query:    61 GDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct:   301 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 360

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct:   361 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 420

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
              P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++  
Sbjct:   421 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVVTS 477

Query:   239 MRRKQPDDISRPL 251
             +      DIS+PL
Sbjct:   478 VAGLSAQDISQPL 490

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

RGD|1305957 Tnk2 "tyrosine kinase, non-receptor, 2" [Rattus norvegicus (taxid:10116)]

 Score = 550 (198.7 bits), Expect = 3.4e-52, P = 3.4e-52
 Identities = 104/193 (53%), Positives = 128/193 (66%)

Query:    61 GDFGMMR-YSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
             GDFG+MR   QND  YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct:   269 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 328

Query:   119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct:   329 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 388

Query:   179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
              P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++  
Sbjct:   389 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVVTS 445

Query:   239 MRRKQPDDISRPL 251
             +      DIS+PL
Sbjct:   446 VAGLSAQDISQPL 458

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA;ISO

GO:0004713 "protein tyrosine kinase activity" evidence=IEA;ISO

GO:0005154 "epidermal growth factor receptor binding" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=ISO

GO:0005768 "endosome" evidence=ISO

GO:0005886 "plasma membrane" evidence=ISO

GO:0005905 "coated pit" evidence=IEA;ISO

GO:0016310 "phosphorylation" evidence=ISO

GO:0030136 "clathrin-coated vesicle" evidence=IEA;ISO

GO:0030424 "axon" evidence=IEA;ISO

GO:0030425 "dendrite" evidence=IEA;ISO

GO:0030426 "growth cone" evidence=IEA;ISO

GO:0043025 "neuronal cell body" evidence=IEA;ISO

GO:0050699 "WW domain binding" evidence=ISO

GO:0050731 "positive regulation of peptidyl-tyrosine phosphorylation" evidence=IEA;ISO

GO:0070436 "Grb2-EGFR complex" evidence=IEA;ISO

GO:2000369 "regulation of clathrin-mediated endocytosis" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q07912	ACK1_HUMAN	2, ., 7, ., 1, 1, ., 1	0.5049	0.7928	0.1917	yes	N/A
Q5U2X5	ACK1_RAT	2, ., 7, ., 1, 1, ., 1	0.5147	0.7928	0.1913	yes	N/A
O54967	ACK1_MOUSE	2, ., 7, ., 1, 1, ., 1	0.5049	0.7928	0.1886	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	251
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	6e-64
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-47
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	3e-46
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	2e-45
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	5e-45
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-34
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	8e-32
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-31
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	1e-30
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	2e-30
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	1e-29
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-29
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-29
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-29
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	3e-29
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	4e-29
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	1e-28
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	4e-28
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	7e-28
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	9e-28
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-27
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-27
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	3e-27
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	5e-27
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	3e-26
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	6e-26
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	7e-26
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-25
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-25
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	5e-25
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	6e-25
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	8e-25
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-24
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-24
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	2e-24
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	2e-24
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	3e-24
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	4e-24
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	4e-24
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	1e-23
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-23
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	1e-23
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	1e-23
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-23
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-23
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	2e-23
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-23
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	2e-23
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	2e-23
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	3e-23
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	5e-23
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	8e-23
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	1e-22
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	1e-22
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-22
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	2e-22
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	4e-22
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	6e-22
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	7e-22
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	9e-22
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	9e-22
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	1e-21
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	1e-21
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-21
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-21
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	2e-21
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	1e-20
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	2e-20
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	2e-20
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-20
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	4e-20
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	5e-20
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	8e-20
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	8e-20
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	1e-19
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	1e-19
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	6e-19
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	6e-19
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	7e-19
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	7e-19
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	8e-19
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	1e-17
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	2e-17
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-11
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	6e-11
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	4e-10
cd05042	269	cd05042, PTKc_Aatyk, Catalytic domain of the Prote	1e-09
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	9e-09
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	1e-08
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-08
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	8e-08
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-07
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	6e-07
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-06
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	2e-06
cd11981	62	cd11981, SH3_VAV3_1, First Src homology 3 domain o	3e-06
cd05086	268	cd05086, PTKc_Aatyk2, Catalytic domain of the Prot	3e-06
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-05
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	2e-05
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-05
cd11831	62	cd11831, SH3_VAV_1, First Src homology 3 domain of	3e-05
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-05
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	6e-05
smart00326	56	smart00326, SH3, Src homology 3 domains	8e-05
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	2e-04
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-04
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	4e-04
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-04
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	4e-04
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	5e-04
cd11886	55	cd11886, SH3_BOI, Src Homology 3 domain of fungal	5e-04
cd11979	63	cd11979, SH3_VAV1_1, First Src homology 3 domain o	9e-04
cd11980	60	cd11980, SH3_VAV2_1, First Src homology 3 domain o	0.001
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	0.001
cd12005	54	cd12005, SH3_Lck, Src homology 3 domain of Lck Pro	0.001
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	0.001
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	0.001
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	0.001
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	0.001
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.002
pfam00018	47	pfam00018, SH3_1, SH3 domain	0.002
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	0.002
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	0.003
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	0.004
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	0.004
cd11819	54	cd11819, SH3_Cortactin_like, Src homology 3 domain	0.004

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score =  199 bits (509), Expect = 6e-64
 Identities = 73/128 (57%), Positives = 89/128 (69%), Gaps = 2/128 (1%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           IL  S      GDFG+MR      D YVM E   +P  WC  ESL+   FS ASD WMFG
Sbjct: 128 ILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFG 187

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEMFT+G EPW GL+G QIL+KID+EGERL RPEACP ++Y +M QCW+ NPA+RP 
Sbjct: 188 VTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPT 247

Query: 168 FSTLKDCL 175
           F+ L++ L
Sbjct: 248 FAALREFL 255

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score =  157 bits (399), Expect = 2e-47
 Identities = 51/116 (43%), Positives = 70/116 (60%), Gaps = 2/116 (1%)

Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R     D Y       LP  W   ESLK  +F+  SD W FGV +WE+FT G +
Sbjct: 144 SDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGEQ 203

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           P+ G++  ++L+ +  +G RLPRPE CP E+Y LM QCW+ +P +RP FS L + L
Sbjct: 204 PYPGMSNEEVLELL-EDGYRLPRPENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score =  154 bits (392), Expect = 3e-46
 Identities = 52/116 (44%), Positives = 69/116 (59%), Gaps = 2/116 (1%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R    +D Y       LP  W   ESLK   F+  SD W FGV +WE+FT GA 
Sbjct: 147 SDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGAT 206

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           P+ GL+  ++L+ + R+G RLP+PE CP E+Y LM  CW  +P +RP FS L + L
Sbjct: 207 PYPGLSNEEVLEYL-RKGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score =  152 bits (386), Expect = 2e-45
 Identities = 49/115 (42%), Positives = 71/115 (61%), Gaps = 1/115 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R   +D Y       LP  W   ESLK  +F+  SD W FGV +WE+FT G +P
Sbjct: 144 SDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEQP 203

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  ++L+ + + G RLP+P  CP E+Y LM QCW+++P +RP FS L + L
Sbjct: 204 YPGMSNEEVLEYL-KNGYRLPQPPNCPPELYDLMLQCWAEDPEDRPTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score =  151 bits (384), Expect = 5e-45
 Identities = 50/115 (43%), Positives = 73/115 (63%), Gaps = 1/115 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R   +D Y   +   LP  W   ESLK  +F+  SD W FGV +WE+FT G EP
Sbjct: 145 SDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSDVWSFGVLLWEIFTLGEEP 204

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  ++L+ + ++G RLP+P  CP E+Y LM QCW+++P +RP FS L + L
Sbjct: 205 YPGMSNAEVLEYL-KKGYRLPKPPNCPPELYKLMLQCWAEDPEDRPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score =  123 bits (311), Expect = 4e-34
 Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 1/112 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY +++ Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 149 GDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKP 208

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P++RP+F+ LK
Sbjct: 209 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELK 259

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score =  117 bits (294), Expect = 8e-32
 Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 2/115 (1%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  + D Y ++  K +P  W   E+  H  FS  SD W FG+ ++EMFT+G  P
Sbjct: 146 ADFGLARLIKEDVY-LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVP 204

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+N  ++  +I   G R+P P  CP E+Y +M +CW+  P +RP F  L++ L
Sbjct: 205 YPGMNNHEVYDQITA-GYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREEL 258

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score =  116 bits (293), Expect = 1e-31
 Identities = 48/118 (40%), Positives = 70/118 (59%), Gaps = 3/118 (2%)

Query: 62  DFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFGM R   + +D Y  T     P  W   E + + +FS  SD W +GVT+WE F++GA+
Sbjct: 138 DFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAK 197

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
           P+  + G +++  ++  GERLPRPE CP E+Y++M  CW   P +RP FS L+    R
Sbjct: 198 PYGEMKGAEVIAMLE-SGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score =  114 bits (286), Expect = 1e-30
 Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 1/114 (0%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ RY  +D Y  ++    P  W P E   +++FS  SD W FGV +WE+F+ G  P+
Sbjct: 143 DFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPY 202

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
              +  ++++ +   G RL RP+  P EVY +M  CW + P +RP F  L   L
Sbjct: 203 ERFSNSEVVESV-SAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score =  113 bits (285), Expect = 2e-30
 Identities = 50/120 (41%), Positives = 70/120 (58%), Gaps = 7/120 (5%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  Y+  D Y +     LP  W P ES+ + +F+  SD W FGV +WE+FT+G 
Sbjct: 164 GDFGMSRDVYT-TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGK 222

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +PW GL+  ++++ I  +G  L RP  CP EVY +M  CW ++P +R      KD   RL
Sbjct: 223 QPWYGLSNEEVIECIT-QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINI---KDIHERL 278

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score =  111 bits (280), Expect = 1e-29
 Identities = 47/118 (39%), Positives = 76/118 (64%), Gaps = 4/118 (3%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  YS  D Y  +E   +P  W P ES+ +N+++  SD W +GV +WE+F++G +
Sbjct: 173 DFGLSRNIYSA-DYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQ 231

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
           P+ G+   +++  + R+G  L  P+ CP+E+Y LMR CWSK P++RP F+++   L R
Sbjct: 232 PYYGMAHEEVIYYV-RDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score =  110 bits (278), Expect = 2e-29
 Identities = 45/114 (39%), Positives = 68/114 (59%), Gaps = 1/114 (0%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ R  ++D Y   E    P  W   E+  + +F+  SD W FG+ + E+ T+G  P+
Sbjct: 146 DFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPY 205

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
            G+   ++L++++R G R+PRP  CP E+Y LM QCW K+P ERP F  L+  L
Sbjct: 206 PGMTNREVLEQVER-GYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFL 258

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score =  110 bits (277), Expect = 2e-29
 Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 1/123 (0%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L   ++     DFG+ R  + D Y   E    P  W   E+  +N+FS  SD W FG+ 
Sbjct: 134 VLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGIL 193

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
           + E+ T+G  P+ G+   ++LQ++D+ G R+P P  CP E+Y +M  CW ++P +RP F 
Sbjct: 194 LTEIVTYGRMPYPGMTNAEVLQQVDQ-GYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFE 252

Query: 170 TLK 172
           TL+
Sbjct: 253 TLQ 255

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score =  110 bits (277), Expect = 2e-29
 Identities = 42/116 (36%), Positives = 69/116 (59%), Gaps = 2/116 (1%)

Query: 62  DFGMMRYSQNDCYVMTE-RKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFGM R  +   Y +++  K +P  W   E+L + +++  SD W +G+ +WE F+ G  P
Sbjct: 136 DFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTP 195

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY 176
           + G++  Q  ++I+  G R+P P+ CP E+Y LM QCW+ +P  RP FS + + L 
Sbjct: 196 YPGMSNQQTRERIES-GYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score =  110 bits (276), Expect = 3e-29
 Identities = 46/110 (41%), Positives = 66/110 (60%), Gaps = 1/110 (0%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P+
Sbjct: 147 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 206

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
            G++  Q+ + +++ G R+ RPE CP +VY LMR CW  NP++RP F+ +
Sbjct: 207 PGIDLSQVYELLEK-GYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEI 255

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score =  110 bits (276), Expect = 4e-29
 Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 4/119 (3%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  YS  D Y +  R  LP  W P ES+ + +F+  SD W FGV +WE+FT+G 
Sbjct: 164 GDFGMSRDIYS-TDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGK 222

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
           +PW  L+  + ++ I  +G  L RP  CP EVYA+M+ CW + P +R     +   L  
Sbjct: 223 QPWYQLSNTEAIECIT-QGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score =  109 bits (273), Expect = 1e-28
 Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 4/119 (3%)

Query: 62  DFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +        Y     K +P  W  +ES+ H  ++  SD W +GVT+WE+ TFGA+
Sbjct: 152 DFGLAKLLDVDEKEYHAEGGK-VPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAK 210

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++I   +++ GERLP+P  C ++VY ++ +CW  +   RP F  L +   ++
Sbjct: 211 PYEGIPAVEIPDLLEK-GERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKM 268

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score =  107 bits (270), Expect = 4e-28
 Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 15/133 (11%)

Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG- 117
            DFG+ +      D Y + E    P  W   E L+ ++FS ASD W FGVT++E+FT+G 
Sbjct: 151 SDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGD 210

Query: 118 ------AEPWVGL----NGMQILQKIDR--EGERLPRPEACPVEVYALMRQCWSKNPAER 165
                 AE    +      M + + ++   EGERLPRP +CP EVY LM+ CW   P +R
Sbjct: 211 PSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDR 270

Query: 166 PKFSTLKDCLYRL 178
           P F+ L   + RL
Sbjct: 271 PSFADLILIVDRL 283

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score =  107 bits (269), Expect = 7e-28
 Identities = 46/112 (41%), Positives = 71/112 (63%), Gaps = 4/112 (3%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  YS  D Y +  +  LP  W P E++ + +F+  SD W FGV +WE+F++G +
Sbjct: 167 DFGLSRDIYS-ADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQ 225

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+ G +  ++++ I R  + LP PE CP  VYALM +CW++ PA RP+F  +
Sbjct: 226 PYYGFSNQEVIEMI-RSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDI 276

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score =  106 bits (267), Expect = 9e-28
 Identities = 48/117 (41%), Positives = 69/117 (58%), Gaps = 4/117 (3%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+ R  Y  +D Y       LP  W   ESL   +F+  SD W FGV +WE+ T G 
Sbjct: 153 GDFGLARDIYK-SDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQ 211

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           +P+  LN  ++LQ +   G RL +PE CP ++Y LM  CW+++P+ERP F  +++ L
Sbjct: 212 QPYPALNNQEVLQHV-TAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEIL 267

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score =  106 bits (266), Expect = 2e-27
 Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 2/110 (1%)

Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WEM T   +
Sbjct: 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQ 220

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
           P+ GL+  ++L+ +  +G  L  PE CP ++  LMR CW  NP  RP F 
Sbjct: 221 PYQGLSNEEVLKFV-IDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFL 269

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score =  106 bits (266), Expect = 2e-27
 Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 62  DFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R     D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  P
Sbjct: 175 DFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSP 234

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+  ++ L K+ +EG R+ +P+ C  E+Y LMR CW + P++RP F  L + L R+
Sbjct: 235 YPGI-PVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score =  105 bits (265), Expect = 3e-27
 Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 10/125 (8%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFGM R  YS +D Y +  R PLP  W   ES+   +F+  SD W FGVT+WE+ T   E
Sbjct: 173 DFGMSRNLYS-SDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCRE 231

Query: 120 -PWVGLNGMQILQKI-----DREGER-LPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
            P+  L   Q+++       D   +  LPRP  CP ++Y LM +CW ++  +RP F  + 
Sbjct: 232 QPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIH 291

Query: 173 DCLYR 177
             L R
Sbjct: 292 LFLQR 296

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score =  104 bits (262), Expect = 5e-27
 Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 4/120 (3%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  YS  D Y       +P  W  +ESL    ++  SD W FGVT+WE+ T G  
Sbjct: 156 DFGLSKKIYSG-DYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQT 214

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+   +I   + R G RL +PE C  E+Y LM  CW  +P +RP F+ L++ L  + 
Sbjct: 215 PYPGVENHEIYDYL-RHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score =  102 bits (255), Expect = 3e-26
 Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 1/114 (0%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ R  +++ Y   E    P  W   E++ +  F+  SD W FG+ + E+ T+G  P+
Sbjct: 145 DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPY 204

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
            G+   +++Q ++R G R+PRP+ CP E+Y LMR CW + P ERP F  L+  L
Sbjct: 205 PGMTNPEVIQNLER-GYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVL 257

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score =  102 bits (255), Expect = 6e-26
 Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 8/128 (6%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  YS  D Y +     LP  W P ES+ + +F+  SD W FGV +WE+FT+G 
Sbjct: 165 GDFGMSRDVYS-TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 223

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +PW  L+  ++++ I  +G  L RP  CP EVY +M  CW + P +R     +K+ +Y++
Sbjct: 224 QPWFQLSNTEVIECIT-QGRVLERPRVCPKEVYDIMLGCWQREPQQR---LNIKE-IYKI 278

Query: 179 TPAVMKAT 186
             A+ KAT
Sbjct: 279 LHALGKAT 286

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score =  101 bits (252), Expect = 7e-26
 Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 2/111 (1%)

Query: 62  DFGMMRYSQNDCYVMTE-RKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFGM R  ++  Y  T   K +P  W   E+L + ++S  SD W FG+ +WE F+ GA P
Sbjct: 137 DFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVP 196

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +  L+  Q  + I+ +G RLP PE CP  VY LM +CW  +P +RP FST+
Sbjct: 197 YANLSNQQTREAIE-QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTV 246

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score =  100 bits (251), Expect = 1e-25
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++    F+  SD W FG+ ++E+ T+G  P
Sbjct: 145 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIP 204

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++   ++  + R G R+PR E CP E+Y +M+ CW +   ERP F  L+  L
Sbjct: 205 YPGMSNSDVMSALQR-GYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVL 258

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score =  100 bits (251), Expect = 2e-25
 Identities = 38/118 (32%), Positives = 68/118 (57%), Gaps = 2/118 (1%)

Query: 62  DFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R  ++ +    T+   +P  W   E++ + +F+ ASD W FG+ +WE+ ++G  P
Sbjct: 149 DFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERP 208

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +  ++   +++ ++ +G RLP P  CP  +Y LM  CW K+  ERP FS +   L ++
Sbjct: 209 YWDMSNQDVIKAVE-DGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 98.9 bits (246), Expect = 5e-25
 Identities = 40/111 (36%), Positives = 65/111 (58%), Gaps = 1/111 (0%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM R   +  Y  +  K +P  W   E+L + ++S  SD W +G+ +WE F+ G  P+
Sbjct: 136 DFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPY 195

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
            G+   Q  +++++ G R+  P+ CP +VY +M++CW   P  RPKFS L+
Sbjct: 196 PGMTNQQAREQVEK-GYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQ 245

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 98.9 bits (246), Expect = 6e-25
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 5/116 (4%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ R          +   LP  W   E+LKH +FS  SD W +GV +WE+F++G  P+
Sbjct: 143 DFGLARVGSMG----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY 198

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
             ++  ++ + +++ G R+  PE CP +VY LM  CW   P +RP F  L++ L +
Sbjct: 199 PKMSLKEVKECVEK-GYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 98.4 bits (245), Expect = 8e-25
 Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 1/110 (0%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM RY  +D Y  +     P  W P E    +++S  SD W FGV +WE+FT G  P+
Sbjct: 143 DFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPF 202

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
              +  ++++ I R G RL RP+   + VY +M  CW + P  RP F+ L
Sbjct: 203 EKKSNYEVVEMISR-GFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAEL 251

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 98.9 bits (246), Expect = 1e-24
 Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 7/119 (5%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           D G+ R  YS  D Y +  +  LP  W P E++ + +FS  SD W FGV +WE+F+FG +
Sbjct: 167 DLGLSREIYS-ADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQ 225

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G +  ++++ + R+ + LP  E CP  +Y+LM +CW + P+ RP+F   KD   RL
Sbjct: 226 PYYGFSNQEVIEMV-RKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRF---KDIHTRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 98.2 bits (245), Expect = 1e-24
 Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 5/117 (4%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+   ++         K LP  W   E+L+  +FS  SD W FG+ +WE+++FG  P+
Sbjct: 145 DFGL---AKEASQGQDSGK-LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             +    ++  +++ G R+  PE CP EVY +M+ CW  +PA+RP F  L++ L  +
Sbjct: 201 PRIPLKDVVPHVEK-GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 98.0 bits (244), Expect = 2e-24
 Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 1/110 (0%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ RY  +D Y  +     P  W P E L +++FS  SD W FGV +WE+++ G  P+
Sbjct: 143 DFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPY 202

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
              N  + ++K+  +G RL RP     +VYA+M  CW +   ERP F  L
Sbjct: 203 ERFNNSETVEKVS-QGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQL 251

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 98.2 bits (244), Expect = 2e-24
 Identities = 49/123 (39%), Positives = 66/123 (53%), Gaps = 4/123 (3%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  YS  D Y +     LP  W P ES+ + +F+  SD W  GV +WE+FT+G 
Sbjct: 162 GDFGMSRDVYS-TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 220

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +PW  L+  ++++ I  +G  L RP  CP EVY LM  CW + P  R     +   L  L
Sbjct: 221 QPWYQLSNNEVIECIT-QGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279

Query: 179 TPA 181
             A
Sbjct: 280 AKA 282

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 97.0 bits (241), Expect = 3e-24
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L  +   +   DFG+ +    D   Y        P  W   E + + +FS  SD W FG
Sbjct: 126 VLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFG 185

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           V +WE F++G +P+ G+ G ++ Q I+  GER+  P+ CP E+Y LM+ CW+    ERP 
Sbjct: 186 VLMWEAFSYGQKPYKGMKGNEVTQMIES-GERMECPQRCPPEMYDLMKLCWTYGVDERPG 244

Query: 168 FSTLK 172
           F+ ++
Sbjct: 245 FAVVE 249

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 97.4 bits (242), Expect = 4e-24
 Identities = 44/118 (37%), Positives = 69/118 (58%), Gaps = 2/118 (1%)

Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D      +   +P  W  +ES+ H +F+  SD W +GVT+WE+ TFGA+P
Sbjct: 152 DFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKP 211

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   +I   +++ GERLP+P  C ++VY +M +CW  +   RP+F  L D   R+
Sbjct: 212 YDGIPAREIPDLLEK-GERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 97.1 bits (242), Expect = 4e-24
 Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 83  PCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR 142
           P  W  +ESL + ++S ASD W FGV +WE+ T G  P+V ++  ++   + ++G RL +
Sbjct: 182 PVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYL-KDGYRLAQ 240

Query: 143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           P  CP E++A+M  CW+ +P ERP FS L  CL
Sbjct: 241 PINCPDELFAVMACCWALDPEERPSFSQLVQCL 273

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 96.0 bits (239), Expect = 1e-23
 Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFGM R   +   Y    R  LP  W P E+     F+  +D W FGV +WE+F+ G  
Sbjct: 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYM 220

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+ G    ++++ +   G RL  P+ CP  VY +M  CW   P +RP F+T+
Sbjct: 221 PYPGRTNQEVMEFV-TGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATI 271

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 96.6 bits (240), Expect = 1e-23
 Identities = 47/132 (35%), Positives = 72/132 (54%), Gaps = 3/132 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L   + +S   DFG+ R    + YV      LP  W  +ESL ++ ++  SD W FGV 
Sbjct: 150 VLVGENLASKIADFGLSR--GEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVL 207

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
           +WE+ + G  P+ G+   ++ +K+  +G R+ +P  C  EVY LMRQCW   P ERP F+
Sbjct: 208 LWEIVSLGGTPYCGMTCAELYEKLP-QGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFA 266

Query: 170 TLKDCLYRLTPA 181
            +   L R+  A
Sbjct: 267 QISVQLSRMLEA 278

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 97.0 bits (241), Expect = 1e-23
 Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 2/122 (1%)

Query: 62  DFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R     D Y  T    LP  W   E+L    ++  SD W FG+ +WE+FT G  P
Sbjct: 177 DFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSP 236

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+  ++ L K+ REG R+ +P  C  E+Y LMR+CW   P +RP F  L + L ++  
Sbjct: 237 YPGIP-VEELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295

Query: 181 AV 182
           AV
Sbjct: 296 AV 297

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 95.8 bits (238), Expect = 1e-23
 Identities = 48/116 (41%), Positives = 63/116 (54%), Gaps = 4/116 (3%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  YS  D Y       LP  W  +ESL  N ++  SD W FGVT+WE+ T G  
Sbjct: 156 DFGLSKKIYS-GDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQT 214

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           P+ G+   +I   + + G RL +P  C  +VY LM QCWS  P  RP F  L+D L
Sbjct: 215 PYAGVENSEIYNYLIK-GNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQL 269

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 95.5 bits (237), Expect = 2e-23
 Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 3/129 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           IL   +  +   DFG+ R    + YV      LP  W  +ESL ++ ++  SD W +GV 
Sbjct: 143 ILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL 200

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
           +WE+ + G  P+ G+   ++ +K+  +G RL +P  C  EVY LMRQCW + P ERP F+
Sbjct: 201 LWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFA 259

Query: 170 TLKDCLYRL 178
            +   L R+
Sbjct: 260 QILVSLNRM 268

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 95.6 bits (238), Expect = 2e-23
 Identities = 48/138 (34%), Positives = 72/138 (52%), Gaps = 16/138 (11%)

Query: 50  ILFFSSSSSSSGDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           IL  S +    GDFG+ +      + Y + E    P  W   ESL  ++FS ASD W FG
Sbjct: 139 ILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFG 198

Query: 108 VTIWEMFTFG----AEPWVGL-------NGMQI---LQKIDREGERLPRPEACPVEVYAL 153
           V ++E+FT+     + P   +        G  I   L ++ +   RLP P  CP E+YA+
Sbjct: 199 VVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAI 258

Query: 154 MRQCWSKNPAERPKFSTL 171
           M++CW+ +P++RP FS L
Sbjct: 259 MKECWNNDPSQRPSFSEL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 95.4 bits (237), Expect = 2e-23
 Identities = 46/132 (34%), Positives = 76/132 (57%), Gaps = 5/132 (3%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQND---CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMF 106
           IL  S+      DFG+ R  ++D    Y  +  K +P  W   E++ + +F+ ASD W F
Sbjct: 138 ILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGK-IPIRWTAPEAIAYRKFTSASDVWSF 196

Query: 107 GVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP 166
           G+ +WE+ +FG  P+  ++  ++++ I+ +G RLP P  CP  VY LM QCW ++ A RP
Sbjct: 197 GIVMWEVMSFGERPYWDMSNHEVMKAIN-DGFRLPAPMDCPSAVYQLMLQCWQQDRARRP 255

Query: 167 KFSTLKDCLYRL 178
           +F  + + L +L
Sbjct: 256 RFVDIVNLLDKL 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 94.8 bits (236), Expect = 2e-23
 Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 4/113 (3%)

Query: 62  DFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           DFG+ R   +  Y          LP  W  +ESL+  +F+  SD W FGV +WE+ T GA
Sbjct: 141 DFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGA 200

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
            P+  ++   I   + + G RL +PE CP  +Y +M  CW   P  RP FS L
Sbjct: 201 PPYPDVDSFDITVYLLQ-GRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSEL 252

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 95.4 bits (237), Expect = 2e-23
 Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 4/131 (3%)

Query: 50  ILFFSSSSSSSGDFGM--MRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           IL  S S     DFG+  + Y  +  Y  +E K  P  W  +ES+   +++  SD W +G
Sbjct: 140 ILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKT-PIKWMALESILFGRYTHQSDVWSYG 198

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           VT+WEM ++GAEP+ G+   ++   +++ GERL +P+ C ++VY +M +CW  +   RP 
Sbjct: 199 VTVWEMMSYGAEPYAGMRPHEVPDLLEK-GERLAQPQICTIDVYMVMVKCWMIDENVRPT 257

Query: 168 FSTLKDCLYRL 178
           F  L +   R+
Sbjct: 258 FKELANEFTRM 268

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 94.8 bits (236), Expect = 2e-23
 Identities = 38/90 (42%), Positives = 55/90 (61%)

Query: 82  LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP 141
           +P  W   E+++ + FS  SD W FGV +WE+FT G  P+ GL+  ++L ++      LP
Sbjct: 180 IPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP 239

Query: 142 RPEACPVEVYALMRQCWSKNPAERPKFSTL 171
            PE CP  +Y LM +CW+ NP +RP FS L
Sbjct: 240 VPEGCPSRLYKLMTRCWAVNPKDRPSFSEL 269

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 95.0 bits (236), Expect = 3e-23
 Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 5/132 (3%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQND---CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMF 106
           IL  S+      DFG+ R  ++D    Y     K +P  W   E++ + +F+ ASD W +
Sbjct: 137 ILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK-IPIRWTAPEAIAYRKFTSASDVWSY 195

Query: 107 GVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP 166
           G+ +WE+ ++G  P+  ++   +++ I+ EG RLP P  CP  ++ LM  CW K+  ERP
Sbjct: 196 GIVMWEVMSYGERPYWEMSNQDVIKAIE-EGYRLPAPMDCPAALHQLMLDCWQKDRNERP 254

Query: 167 KFSTLKDCLYRL 178
           KF  +   L +L
Sbjct: 255 KFEQIVSILDKL 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 94.3 bits (234), Expect = 5e-23
 Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 2/118 (1%)

Query: 62  DFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R   + D YV   +  +P  W  +ESL  + ++  SD W FGV +WE+ T G  P
Sbjct: 170 DFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 229

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   + L  + + G R+ RPE C  E+Y LM  CW + P +RP F+ +   L ++
Sbjct: 230 YPGI-APERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 94.3 bits (234), Expect = 8e-23
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 3/118 (2%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    + YV      LP  W  +ESL ++ ++  SD W +GV +WE+ + G  P
Sbjct: 166 ADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 223

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   ++ +K+  +G RL +P  C  EVY LMRQCW + P ERP F+ +   L R+
Sbjct: 224 YCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 93.2 bits (231), Expect = 1e-22
 Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++    F+  SD W FG+ + E+ T+G  P
Sbjct: 144 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 203

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  ++++ ++R G R+PRPE CP E+Y +M +CW   P ERP F  ++  L
Sbjct: 204 YPGMSNPEVIRALER-GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 257

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 93.9 bits (233), Expect = 1e-22
 Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 1/90 (1%)

Query: 82  LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP 141
           +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P+ G+   +I   +++ GERLP
Sbjct: 173 VPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK-GERLP 231

Query: 142 RPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +P  C ++VY +M +CW  +   RPKF  L
Sbjct: 232 QPPICTIDVYMIMVKCWMIDADSRPKFREL 261

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 93.1 bits (231), Expect = 1e-22
 Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 2/116 (1%)

Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+ +SD W FGV +WE+ +   +
Sbjct: 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 220

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           P+ GL+  Q+L K   +G  L +P+ CP  V  LMR CW  NP  RP F  + + L
Sbjct: 221 PYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 92.4 bits (229), Expect = 2e-22
 Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 1/115 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 144 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 203

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+N  ++L++++R G R+P P+ CP+ ++ LM QCW K+P ERP F  L+  L
Sbjct: 204 YPGMNNREVLEQVER-GYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFL 257

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 91.6 bits (227), Expect = 4e-22
 Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 6/118 (5%)

Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 220

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKD 173
           P+ G++  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F    S++K+
Sbjct: 221 PYQGMSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 90.9 bits (225), Expect = 6e-22
 Identities = 38/115 (33%), Positives = 66/115 (57%), Gaps = 1/115 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 144 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 203

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L++++R G R+P P+ CP  ++ LM+ CW K+P ERP F  ++  L
Sbjct: 204 YPGMVNREVLEQVER-GYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFL 257

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 91.2 bits (226), Expect = 7e-22
 Identities = 46/131 (35%), Positives = 73/131 (55%), Gaps = 7/131 (5%)

Query: 50  ILFFSSSSSSSGDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           +L F   +    D G+ R  Y+  D Y +     LP  W   E++ + +FS  SD W +G
Sbjct: 155 VLVFDKLNVKISDLGLFREVYAA-DYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYG 213

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK 167
           V +WE+F++G +P+ G +   +++ I R  + LP P+ CP  VY LM +CW++ P+ RP+
Sbjct: 214 VVLWEVFSYGLQPYCGYSNQDVIEMI-RNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPR 272

Query: 168 FSTLKDCLYRL 178
           F   KD   RL
Sbjct: 273 F---KDIHSRL 280

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 91.6 bits (227), Expect = 9e-22
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 182 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 241

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 242 PYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 91.2 bits (226), Expect = 9e-22
 Identities = 46/119 (38%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 179 ADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 238

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P+ RP F  L + L R+
Sbjct: 239 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 91.6 bits (227), Expect = 1e-21
 Identities = 46/119 (38%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 176 ADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGS 235

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR+CW   P++RP F  L + L R+
Sbjct: 236 PYPGIP-VEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 90.0 bits (223), Expect = 1e-21
 Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)

Query: 63  FGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWV 122
           F  ++  +++    T     P  W   E+++++ FS ASD W FG+ +WE+ ++G  P+ 
Sbjct: 151 FRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYW 210

Query: 123 GLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            ++G  +++ ++ +G RLP P  CP  ++ LM  CW K   ERP+FS +   L ++
Sbjct: 211 DMSGQDVIKAVE-DGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 90.9 bits (225), Expect = 1e-21
 Identities = 42/118 (35%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R  + D      +   +P  W  +E + + +F+  SD W +GVTIWE+ TFG +P
Sbjct: 152 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 211

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   +I   +++ GERLP+P  C ++VY +M +CW  +   RPKF  L     R+
Sbjct: 212 YDGIPTREIPDLLEK-GERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 90.6 bits (225), Expect = 2e-21
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 1/116 (0%)

Query: 61  GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   ND  YV+     LP  W   ES+ +  ++  SD W +G+ +WE+F+ G+ 
Sbjct: 183 CDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSN 242

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           P+ G+       K+ +EG R+ +PE  P E+Y +M+ CW  +P +RP F  +   +
Sbjct: 243 PYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLI 298

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 89.2 bits (221), Expect = 2e-21
 Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 4/118 (3%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM R+  +D Y  +     P  W   E    +++S  SD W FGV +WE+F+ G  P+
Sbjct: 143 DFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPY 202

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
              +  ++++ I+  G RL +P      VY LM+ CW + P +RP FS L   L++L 
Sbjct: 203 ENRSNSEVVETIN-AGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLL---LHQLA 256

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 87.3 bits (216), Expect = 1e-20
 Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 83  PCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR 142
           P  W   E +   +FS  SD W +G+T+WE F++G +P+  + G +++  I++ G+RL  
Sbjct: 161 PLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQ-GKRLDC 219

Query: 143 PEACPVEVYALMRQCWSKNPAERPKFSTLKD 173
           P  CP E+YALM+ CW     +RP F+ +++
Sbjct: 220 PAECPPEMYALMKDCWIYKWEDRPNFAKVEE 250

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 88.4 bits (219), Expect = 2e-20
 Identities = 43/112 (38%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  Y   D YV      LP  W   ES+    ++  SD W FGV +WE+F+ GA 
Sbjct: 216 DFGLARDIYKDPD-YVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGAS 274

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+ G+   +   +  +EG R+  PE    E+Y++M  CW  NP +RP FS L
Sbjct: 275 PYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSEL 326

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 87.7 bits (217), Expect = 2e-20
 Identities = 48/119 (40%), Positives = 64/119 (53%), Gaps = 10/119 (8%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFGM R  YS  D Y +  R  LP  W   ES+   +F+ ASD W FGVT+WE+ T   E
Sbjct: 173 DFGMSRNLYS-GDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKE 231

Query: 120 -PWVGLNGMQILQKID---REGER---LPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
            P+  L+  Q+++      R+  R   LP+P  CP  +Y LM  CW +N  ERP F  +
Sbjct: 232 QPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEI 290

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 86.6 bits (214), Expect = 2e-20
 Identities = 36/114 (31%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ + + +      +   LP  W   E+L+  +FS  SD W FG+ +WE+++FG  P+
Sbjct: 145 DFGLTKEASS----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200

Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
             +    ++ ++++ G ++  P+ CP  VY +M+QCW  + A RP F  L++ L
Sbjct: 201 PRIPLKDVVPRVEK-GYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQL 253

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 86.2 bits (213), Expect = 4e-20
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 2/117 (1%)

Query: 57  SSSSGDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT 115
           +    DFG+ +   N D Y       +P  W  +ESL    ++  SD W FGVT+WE+ T
Sbjct: 150 NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIAT 209

Query: 116 FGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
            G  P+ G+   +I   + R+G RL +P  C   +Y+LM  CW  NP +RP F TL+
Sbjct: 210 RGQTPYPGVENSEIYDYL-RQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLR 265

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 87.3 bits (216), Expect = 5e-20
 Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 1/109 (0%)

Query: 62  DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R  +ND  YV+     LP  W   ES+ +  ++  SD W +G+ +WE+F+ G+ P
Sbjct: 257 DFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSP 316

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
           + G+       K+ +EG R+  PE  P E+Y +M+ CW  +P +RP F 
Sbjct: 317 YPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFK 365

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 85.7 bits (212), Expect = 8e-20
 Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 15/126 (11%)

Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +     ++ Y + E    P  W  +E LK N+FS ASD W FGVT++E+ T   
Sbjct: 149 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCD 208

Query: 117 -------GAEPWVGLNGMQI----LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
                    E  +G    Q+    L ++   G RLP P+ CP EVY LM+ CW      R
Sbjct: 209 SKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFR 268

Query: 166 PKFSTL 171
           P F +L
Sbjct: 269 PTFRSL 274

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 85.8 bits (212), Expect = 8e-20
 Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 15/126 (11%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+ +  + D    T +  L  P  W   E L  ++F  ASD W FGVT++E+ T+  
Sbjct: 151 GDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCD 210

Query: 119 E-------------PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
                         P  G   +  L ++  EG+RLPRP  CP EVY LMR+CW   P++R
Sbjct: 211 SESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKR 270

Query: 166 PKFSTL 171
             F  L
Sbjct: 271 TTFQNL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 84.9 bits (210), Expect = 1e-19
 Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 5/133 (3%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPL----PCPWCPMESLKHNQFSQASDAWM 105
           IL  S+      DFG+ R+ ++D    T    L    P  W   E++ + +F+ ASD W 
Sbjct: 137 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWS 196

Query: 106 FGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
           +G+ +WE+ ++G  P+  ++   ++  I+++  RLP P  CP  ++ LM  CW K+   R
Sbjct: 197 YGIVMWEVMSYGERPYWDMSNQDVINAIEQD-YRLPPPMDCPTALHQLMLDCWQKDRNAR 255

Query: 166 PKFSTLKDCLYRL 178
           PKF  +   L ++
Sbjct: 256 PKFGQIVSTLDKM 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 84.7 bits (209), Expect = 1e-19
 Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 144 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 203

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+
Sbjct: 204 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQ 254

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 83.9 bits (207), Expect = 6e-19
 Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 3/116 (2%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  Y   D YV      LP  W   ES+    ++  SD W FGV +WE+F+ GA 
Sbjct: 217 DFGLARDIYKDPD-YVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGAS 275

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           P+ G+   +   +  ++G R+  PE    E+Y +M  CW  +P ERP FS L + L
Sbjct: 276 PYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEIL 331

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 84.7 bits (209), Expect = 6e-19
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 62  DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R   +D  YV      LP  W   ES+  N ++  SD W +G+ +WE+F+ G  P
Sbjct: 280 DFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTP 339

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+          + G R+ +P+    EVY +M +CW+  P +RP F  L D +  L P
Sbjct: 340 YPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399

Query: 181 A 181
           +
Sbjct: 400 S 400

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 83.5 bits (206), Expect = 7e-19
 Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 10/123 (8%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFGM R  YS  D Y +  R  LP  W   ES+   +F+ ASD W FGVT+WEMFT   E
Sbjct: 172 DFGMSRNLYS-GDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKE 230

Query: 120 -PWVGLNGMQILQKID---REGER---LPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
            P+  L+  Q+++      R   R   L +   CP  V+ LM +CWS++  +RP F+ + 
Sbjct: 231 QPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIH 290

Query: 173 DCL 175
             L
Sbjct: 291 HFL 293

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 83.4 bits (206), Expect = 7e-19
 Identities = 45/118 (38%), Positives = 62/118 (52%), Gaps = 8/118 (6%)

Query: 62  DFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-GAE 119
           DFGM R     D Y +  R  LP  W   E +   +F+ ASD W FGVT+WE+      +
Sbjct: 181 DFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240

Query: 120 PWVGLNGMQILQ---KIDREGER---LPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+  L   Q+++   +  R+  R   L RP  CP  +Y LM QCWS++  ERP FS +
Sbjct: 241 PYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDI 298

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 84.1 bits (208), Expect = 8e-19
 Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 1/119 (0%)

Query: 61  GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   ND  YV+     LP  W   ES+    ++  SD W +G+ +WE+F+ G  
Sbjct: 254 CDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKS 313

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+       K+ + G ++ RP+  P E+Y++M+ CW+  P ERP FS +   + R 
Sbjct: 314 PYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 80.8 bits (199), Expect = 1e-17
 Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 1/118 (0%)

Query: 62  DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  Y+      LP  W   ES+ +N ++  SD W FG+ +WE+FT G  P
Sbjct: 282 DFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTP 341

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +  L   +      + G R+ +P     E+Y +M++CW +    RP FS L   +  L
Sbjct: 342 YPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 79.7 bits (196), Expect = 2e-17
 Identities = 43/122 (35%), Positives = 62/122 (50%), Gaps = 3/122 (2%)

Query: 62  DFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  Y   D YV      LP  W   E++    ++  SD W FGV +WE+F+ GA 
Sbjct: 222 DFGLARDIYKDPD-YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 280

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L 
Sbjct: 281 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340

Query: 180 PA 181
            A
Sbjct: 341 QA 342

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 61.0 bits (149), Expect = 3e-11
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 14/120 (11%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPC---PWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R       + T           +   E L    + +A D W  GV ++E+ T G
Sbjct: 139 ADFGLARQLDPGEKLTT-----FVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLT-G 192

Query: 118 AEPWVG-LNGMQILQKIDREGERLPRPEA-CPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
             P+ G    +++ +KI +     P PE     E   L+R+   K+P +R    T ++ L
Sbjct: 193 KPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKRL---TAEEAL 249

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 60.6 bits (147), Expect = 6e-11
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 82  LPCPWCPMESLK--HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER 139
              PW   E ++      + A+D W FG T+ E+ + G EP   L+  +  +   ++  R
Sbjct: 166 ERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFY-QDQHR 224

Query: 140 LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           LP P+ C  E+  L+ QCW+ +P +RP F   +  L  L 
Sbjct: 225 LPMPD-CA-ELANLINQCWTYDPTKRPSF---RAILRDLN 259

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 58.4 bits (141), Expect = 4e-10
 Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 15/119 (12%)

Query: 61  GDFGM--MRYSQNDCYVMTERKPLPCPWCPMESLK--HNQF-----SQASDAWMFGVTIW 111
           GD+G+   +Y + D YV  ++  +P  W   E +   H        ++ S+ W  GVTIW
Sbjct: 142 GDYGLSHNKYKE-DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIW 200

Query: 112 EMFTFGAEPWVGLNGMQILQKIDREGE-RLPRPE-ACPVE--VYALMRQCWSKNPAERP 166
           E+F  G++P+  L+  Q+L    RE + +LP+P    P+    Y +M+ CW + P +RP
Sbjct: 201 ELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCWLQ-PEQRP 258

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

 Score = 56.8 bits (137), Expect = 1e-09
 Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 15/119 (12%)

Query: 61  GDFGMM--RYSQNDCYVMTERKPLPCPWCPME-------SLKHNQFSQASDAWMFGVTIW 111
           GD+G+   +Y + D Y+  +   +P  W   E        L     ++ S+ W  GVT+W
Sbjct: 142 GDYGLALEQYPE-DYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMW 200

Query: 112 EMFTFGAEPWVGLNGMQILQKIDREGE-RLPRPE---ACPVEVYALMRQCWSKNPAERP 166
           E+FT   +P+  L+  Q+L+++ RE + +LP+P+         Y +M+ CW  +P  RP
Sbjct: 201 ELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRP 258

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 54.1 bits (130), Expect = 9e-09
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 8/98 (8%)

Query: 75  VMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKI 133
           ++ ER     PW P E +++ Q  S A+D W FG T+WE+F+ G +P   L+  + LQ  
Sbjct: 163 ILLER----IPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY 218

Query: 134 DREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + +  +LP P+    E+  L+ QC    P  RP F  +
Sbjct: 219 E-DRHQLPAPKW--TELANLINQCMDYEPDFRPSFRAI 253

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 9/89 (10%)

Query: 92  LKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER---LPRPEACPV 148
           L  N +    D W  GV ++E+ T G  P+ G N +  LQ I R          P+    
Sbjct: 171 LGGNGYGPKVDVWSLGVILYELLT-GKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSG 229

Query: 149 --EVYALMRQCWSKNPAERPKFSTLKDCL 175
             E   L+++C +K+P++RP   T ++ L
Sbjct: 230 SEEAKDLIKKCLNKDPSKRP---TAEEIL 255

Length = 260

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 53.8 bits (129), Expect = 1e-08
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ R     C + T     P    P E+LKH  +   SD W  G  ++EM    A  
Sbjct: 147 GDFGVSRLLMGSCDLATTFTGTPYYMSP-EALKHQGYDSKSDIWSLGCILYEMCCL-AHA 204

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP 166
           + G N + ++ +I  EG     PE    ++ ++M+   +K+P+ RP
Sbjct: 205 FEGQNFLSVVLRI-VEGPTPSLPETYSRQLNSIMQSMLNKDPSLRP 249

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 51.4 bits (124), Expect = 8e-08
 Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 3/113 (2%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP-WCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG  +   +             P W   E ++  ++ +A+D W  G T+ EM T G  
Sbjct: 143 ADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT-GKP 201

Query: 120 PWVGL-NGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           PW  L N M  L KI   GE    PE    E    +R+C  ++P +RP    L
Sbjct: 202 PWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADEL 254

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 50.5 bits (121), Expect = 1e-07
 Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 92  LKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY 151
            +   +  A+D W  G T+ EM T G  PW  L G+  + KI R  E  P P+    E  
Sbjct: 174 AQQGGYGLAADIWSLGCTVLEMAT-GKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAK 232

Query: 152 ALMRQCWSKNPAERP 166
             + +C  ++P+ RP
Sbjct: 233 DFILKCLQRDPSLRP 247

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 48.4 bits (116), Expect = 6e-07
 Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 36/114 (31%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ +   +D  ++      P  +   E L     +S+ SD W  GV ++E+      
Sbjct: 135 ADFGLSKLLTSDKSLLKTIVGTP-AYMAPEVLLGKGYYSEKSDIWSLGVILYEL------ 187

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKD 173
                                        E+  L+R+   K+P +RP    + +
Sbjct: 188 ----------------------------PELKDLIRKMLQKDPEKRPSAKEILE 213

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 47.6 bits (114), Expect = 1e-06
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 98  SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQC 157
           S ASD W  G T+ E+ T G  P+  LN M  L +I ++ +  P PE    E+   + QC
Sbjct: 177 STASDIWSLGCTVIELLT-GNPPYYDLNPMAALFRIVQD-DHPPLPEGISPELKDFLMQC 234

Query: 158 WSKNPAERPKFSTL 171
           + K+P  RP    L
Sbjct: 235 FQKDPNLRPTAKQL 248

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 47.6 bits (113), Expect = 2e-06
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)

Query: 85  PWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP 143
           PW   E +   N  S A+D W FG T+ E+   G  P       +  +  +++  RLP P
Sbjct: 185 PWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKK-HRLPEP 243

Query: 144 EACPVEVYALMRQCWSKNPAERPKFSTL 171
            +C  E+  L+ QC +  P +RP F T+
Sbjct: 244 -SCK-ELATLISQCLTYEPTQRPSFRTI 269

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|212914 cd11981, SH3_VAV3_1, First Src homology 3 domain of VAV3 protein

 Score = 43.3 bits (102), Expect = 3e-06
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 198 LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
           L    GD I ++  DP   +W+G+NL+T  +G FP + + P
Sbjct: 22  LNAQIGDTIEVLYADPHSLFWQGRNLTTGELGFFPSDAVKP 62

VAV3 is ubiquitously expressed and functions as a phosphorylation-dependent guanine nucleotide exchange factor (GEF) for RhoA, RhoG, and Rac1. It has been implicated to function in the hematopoietic, bone, cerebellar, and cardiovascular systems. VAV3 is essential in axon guidance in neurons that control blood pressure and respiration. It is overexpressed in prostate cancer cells and it plays a role in regulating androgen receptor transcriptional activity. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

 Score = 46.8 bits (111), Expect = 3e-06
 Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 19/121 (15%)

Query: 61  GDFGMMRYSQNDCYVMTERKPL-PCPWCPME-------SLKHNQFSQASDAWMFGVTIWE 112
           GD+G+      + Y+ TE     P  W   E        L   + ++ S+ W  GVT+WE
Sbjct: 141 GDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWE 200

Query: 113 MFTFGAEPWVGLNGMQILQKIDREGE-RLPRPEACPVEV------YALMRQCWSKNPAER 165
           +F   A+P+  L+  ++L  + ++ + +L +P+   +E+      Y +++ CW  +P +R
Sbjct: 201 LFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQ---LELPYSERWYEVLQFCWL-SPEKR 256

Query: 166 P 166
            
Sbjct: 257 A 257

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 44.2 bits (105), Expect = 2e-05
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 13/116 (11%)

Query: 61  GDFGMMRYSQND-----CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT 115
           GDFG+ +   +D      YV T     P    P E L H  + + SD W  G  I+E+  
Sbjct: 152 GDFGLAKILGHDSSFAKTYVGT-----PYYMSP-EQLNHMSYDEKSDIWSLGCLIYELCA 205

Query: 116 FGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
             + P+   N +Q+  KI +EG+    P     E+  +++   + +P +RP    L
Sbjct: 206 -LSPPFTARNQLQLASKI-KEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEEL 259

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 101 SDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSK 160
            D +  GV +WE+FT G  P+  L   +I   I  +   L  P  CP+E+  ++  C S 
Sbjct: 203 DDIYSLGVVLWEIFT-GKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSH 261

Query: 161 NPAERPKFSTLKDCLYRL 178
           +  +RP    +K+ LY L
Sbjct: 262 DSIKRP---NIKEILYNL 276

Length = 283

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 44.1 bits (104), Expect = 3e-05
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 9/116 (7%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCP-----WCPMESLKHNQFSQASDAWMFGVTIWEMFTF 116
           DFG+ +  + +          P       W   E +K   +++ +D W  G  + EM T 
Sbjct: 149 DFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLT- 207

Query: 117 GAEPWVGLNGMQILQKIDREGERLPR-PEACPVEVYALMRQCWSKNPAERPKFSTL 171
           G  P+     +Q + KI       P  P     E    + + +  +  +RP  + L
Sbjct: 208 GKHPFPDCTQLQAIFKIG--ENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAEL 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|212765 cd11831, SH3_VAV_1, First Src homology 3 domain of VAV proteins

 Score = 40.7 bits (95), Expect = 3e-05
 Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)

Query: 183 MKATQNCHEI-----DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD 237
           M   QN H            L +  GD + +++GD E  WW+G+N++T  +G FP + + 
Sbjct: 2   MVVMQNYHGNPPPPGAGGPVLTLQTGDVVELLKGDAESPWWEGRNVATREVGYFPSSSVK 61

Query: 238 P 238
           P
Sbjct: 62  P 62

VAV proteins function both as cytoplasmic guanine nucleotide exchange factors (GEFs) for Rho GTPases and scaffold proteins and they play important roles in cell signaling by coupling cell surface receptors to various effector functions. They play key roles in processes that require cytoskeletal reorganization including immune synapse formation, phagocytosis, cell spreading, and platelet aggregation, among others. Vertebrates have three VAV proteins (VAV1, VAV2, and VAV3). VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 62

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 90  ESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE 149
           E L    + +A D W  GV ++EM T G  P+   +  +I +KI ++  R   PE    E
Sbjct: 163 EVLLGKGYGKAVDWWSLGVLLYEMLT-GKPPFYAEDRKEIYEKILKDPLRF--PEFLSPE 219

Query: 150 VYALMRQCWSKNPAER 165
              L+     K+P +R
Sbjct: 220 ARDLISGLLQKDPTKR 235

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 43.3 bits (103), Expect = 4e-05
 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 85  PWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-RLPRP 143
            W   E +    +   +D W  G+T  E+   G  P+  L  M+ L KI   G   L  P
Sbjct: 162 YWMAPEVINGKPYDYKADIWSLGITAIELAE-GKPPYSELPPMKALFKIATNGPPGLRNP 220

Query: 144 EACPVEVYALMRQCWSKNPAERP 166
           E    E    +++C  KNP +RP
Sbjct: 221 EKWSDEFKDFLKKCLQKNPEKRP 243

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 43.5 bits (102), Expect = 6e-05
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 6/84 (7%)

Query: 90  ESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE 149
           E  +  ++S+ +D W  GV ++E+ T    P+ G +  +I+Q++   G+  P P  CPV 
Sbjct: 241 ELWERKRYSKKADMWSLGVILYELLTL-HRPFKGPSQREIMQQV-LYGKYDPFP--CPVS 296

Query: 150 --VYALMRQCWSKNPAERPKFSTL 171
             + AL+    SKNPA RP    L
Sbjct: 297 SGMKALLDPLLSKNPALRPTTQQL 320

Length = 478

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 39.1 bits (92), Expect = 8e-05
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            +  +L    GD I ++E   +  WWKG+       G+FP N
Sbjct: 14  QDPDELSFKKGDIITVLE-KSDDGWWKGRLGRG-KEGLFPSN 53

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 41.3 bits (98), Expect = 2e-04
 Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 87  CPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEAC 146
            P E  ++  ++  SD W  G  ++E+ T    P+ G N +++  KI  +G+  P P   
Sbjct: 171 SP-ELCQNKPYNYKSDIWSLGCVLYELCT-LKHPFEGENLLELALKI-LKGQYPPIPSQY 227

Query: 147 PVEVYALMRQCWSKNPAERP 166
             E+  L+     K+P ERP
Sbjct: 228 SSELRNLVSSLLQKDPEERP 247

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 41.7 bits (98), Expect = 2e-04
 Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)

Query: 98  SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQC 157
           +Q++D W FGV ++EM T G+ P+ G +  + +  I +   +L  P+    E  +L+R  
Sbjct: 176 TQSADWWSFGVLMFEMLT-GSLPFQGKDRKETMTMILK--AKLGMPQFLSPEAQSLLRAL 232

Query: 158 WSKNPAER 165
           + +NPA R
Sbjct: 233 FKRNPANR 240

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            ++ +L    GD I ++E D +  WW+G+       G+FP N
Sbjct: 11  QDDDELSFKKGDIITVLEKDDD-GWWEGELNGG-REGLFPAN 50

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 3/87 (3%)

Query: 86  WCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKI-DREGERLPRPE 144
           W   E +K + + + +D W  G+T  E+   G  P   L+ M++L  I       L   +
Sbjct: 164 WMAPEVIKQSGYDEKADIWSLGITAIELAK-GEPPLSDLHPMRVLFLIPKNNPPSLEGNK 222

Query: 145 ACPVEVYALMRQCWSKNPAERPKFSTL 171
                    +  C +K+P ERP    L
Sbjct: 223 FSK-PFKDFVSLCLNKDPKERPSAKEL 248

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 40.3 bits (94), Expect = 4e-04
 Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 13/102 (12%)

Query: 69  SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ 128
           S+ +C    ER P   P C  +S      S A+D W FG T+WE+   G  P   L    
Sbjct: 164 SRQEC---VERIPWIAPECVEDS---KNLSIAADKWSFGTTLWEICYNGEIP---LKDKT 214

Query: 129 ILQKIDR--EGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           + +K +R  EG+ +    +C  E+  LM  C + +P +RP F
Sbjct: 215 LAEK-ERFYEGQCMLVTPSCK-ELADLMTHCMNYDPNQRPFF 254

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 40.3 bits (95), Expect = 5e-04
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 6/81 (7%)

Query: 87  CPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKI-DREGERLPRPEA 145
            P E L      ++SD W  G  I++M T G  P+ G N     QKI   E      P  
Sbjct: 190 SP-ELLNEKPAGKSSDLWALGCIIYQMLT-GKPPFRGSNEYLTFQKILKLE---YSFPPN 244

Query: 146 CPVEVYALMRQCWSKNPAERP 166
            P +   L+ +    +P +R 
Sbjct: 245 FPPDAKDLIEKLLVLDPQDRL 265

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|212819 cd11886, SH3_BOI, Src Homology 3 domain of fungal BOI-like proteins

 Score = 36.9 bits (86), Expect = 5e-04
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 195 EGKLYIDAGDQIVIIEGDPECH--WWKGQNLSTFNIGMFPRN 234
           E +L +  GD+I +IE D E    W+ G+NL T   G+FP  
Sbjct: 13  EDELTLKPGDKIELIEDDEEFGDGWYLGRNLRTGETGLFPVV 54

This subfamily includes the Saccharomyces cerevisiae proteins BOI1 and BOI2, and similar proteins. They contain an N-terminal SH3 domain, a Sterile alpha motif (SAM), and a Pleckstrin homology (PH) domain at the C-terminus. BOI1 and BOI2 interact with the SH3 domain of Bem1p, a protein involved in bud formation. They promote polarized cell growth and participates in the NoCut signaling pathway, which is involved in the control of cytokinesis. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 55

>gnl|CDD|212912 cd11979, SH3_VAV1_1, First Src homology 3 domain of VAV1 protein

 Score = 36.5 bits (84), Expect = 9e-04
 Identities = 16/41 (39%), Positives = 26/41 (63%)

Query: 198 LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
           L ++ GD + + + + E +WW+G+N ST  IG FP N + P
Sbjct: 22  LRLNPGDIVELTKAEAEQNWWEGRNTSTNEIGWFPCNRVKP 62

VAV1 is expressed predominantly in the hematopoietic system and it plays an important role in the development and activation of B and T cells. It is activated by tyrosine phosphorylation to function as a guanine nucleotide exchange factor (GEF) for Rho GTPases following cell surface receptor activation, triggering various effects such as cytoskeletal reorganization, transcription regulation, cell cycle progression, and calcium mobilization. It also serves as a scaffold protein and has been shown to interact with Ku70, Socs1, Janus kinase 2, SIAH2, S100B, Abl gene, ZAP-70, SLP76, and Syk, among others. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The first SH3 domain of Vav1 has been shown to bind the adaptor protein Grb2. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 63

>gnl|CDD|212913 cd11980, SH3_VAV2_1, First Src homology 3 domain of VAV2 protein

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 183 MKATQNCH-EIDEEGK--LYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
           M A QN H      GK  L    GD I ++ GDP+  WW+G+ L T   G FP + + P
Sbjct: 2   MVAVQNYHGNPAPPGKPVLTFQTGDVIELLRGDPDSPWWEGRLLQTKKSGYFPSSSVKP 60

VAV2 is widely expressed and functions as a guanine nucleotide exchange factor (GEF) for RhoA, RhoB and RhoG and also activates Rac1 and Cdc42. It is implicated in many cellular and physiological functions including blood pressure control, eye development, neurite outgrowth and branching, EGFR endocytosis and degradation, and cell cluster morphology, among others. It has been reported to associate with Nek3. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. The SH3 domain of VAV is involved in the localization of proteins to specific sites within the cell, by interacting with proline-rich sequences within target proteins. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 60

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 39.2 bits (91), Expect = 0.001
 Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 21/120 (17%)

Query: 61  GDFGMMRYSQND-----CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT 115
           GDFG  R   +       YV T     P  W   E++ +N     SD W  G  ++E+ T
Sbjct: 142 GDFGSARLLTSPGAYACTYVGTPYYVPPEIW---ENMPYNN---KSDIWSLGCILYELCT 195

Query: 116 ----FGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
               F A  W  L    IL+    +G   P P     E+ +L++Q + +NP  RP  +T+
Sbjct: 196 LKHPFQANSWKNL----ILKVC--QGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTI 249

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|212938 cd12005, SH3_Lck, Src homology 3 domain of Lck Protein Tyrosine Kinase

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)

Query: 190 HEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           +E   +G L  + G+++ I+E   E  WWK Q+L+T   G  P N
Sbjct: 8   YEPSHDGDLGFEKGEKLRILEQSGE--WWKAQSLTTGQEGFIPFN 50

Lck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Lck is expressed in T-cells and natural killer cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 39.1 bits (91), Expect = 0.001
 Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 19/123 (15%)

Query: 62  DFGMMRYSQND---CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           DFG+     N     YV T     P      E +   Q+   SD W  G++  E+   G 
Sbjct: 138 DFGVSTQLVNSIAKTYVGTNAYMAP------ERISGEQYGIHSDVWSLGISFMEL-ALGR 190

Query: 119 EPWVGLNG-------MQILQKI-DREGERLPRPEACPVEVYALMRQCWSKNPAERPKFST 170
            P+  +         +Q+LQ I D +   LP  +     V+  + QC  K P ERP    
Sbjct: 191 FPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVH-FITQCMRKQPKERPAPEN 249

Query: 171 LKD 173
           L D
Sbjct: 250 LMD 252

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 3/119 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLP-CP-WCPMESLKHNQFSQASDAWMFG 107
           IL  S+ +   GDFG  +  Q  C   T  K +   P W   E +    + + +D W  G
Sbjct: 135 ILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVG 194

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP 166
            T+ EM T    PW     M  + KI  +      P     +    +R+ + +N  +RP
Sbjct: 195 CTVVEMLT-EKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRP 252

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 38.9 bits (91), Expect = 0.001
 Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 3/76 (3%)

Query: 90  ESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE 149
           E L    +++A D W  GV I+EM   G  P+ G +  ++   I  +  R PR      E
Sbjct: 171 EVLTETSYTRAVDWWGLGVLIYEML-VGESPFPGDDEEEVFDSIVNDEVRYPR--FLSRE 227

Query: 150 VYALMRQCWSKNPAER 165
             ++MR+   +NP  R
Sbjct: 228 AISIMRRLLRRNPERR 243

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 38.6 bits (90), Expect = 0.001
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 97  FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQ 156
           +++ SD W  GV ++E  T G  P+   N   ++ KI R G   P  +    ++  L+ Q
Sbjct: 178 YNEKSDVWALGVVLYECCT-GKHPFDANNQGALILKIIR-GVFPPVSQMYSQQLAQLIDQ 235

Query: 157 CWSKNPAERPKFSTL 171
           C +K+  +RP    L
Sbjct: 236 CLTKDYRQRPDTFQL 250

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 38.6 bits (90), Expect = 0.002
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 5/82 (6%)

Query: 89  MESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPV 148
           +       +S   D W  G  + EMF  G  PW     +  + K+  +    P P    +
Sbjct: 181 VIHSYSQGYSAKVDIWSLGCVVLEMFA-GRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSM 239

Query: 149 EV----YALMRQCWSKNPAERP 166
            +       +  C++ NP  RP
Sbjct: 240 NLSPVALDFLNACFTINPDNRP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 35.2 bits (82), Expect = 0.002
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFP 232
           E  +L    GD I+++E   +  WWKG+       G+ P
Sbjct: 10  EPDELSFKKGDIIIVLE-KSDDGWWKGRLK-GGKEGLIP 46

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 38.1 bits (88), Expect = 0.002
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 90  ESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR-EGERLPRPEACPV 148
           E++K   +   +D W  G+T+ EM      P   LN M++L KI + E   L +P    +
Sbjct: 185 ETMKDTPYDYKADIWSLGITLIEMAQI-EPPHHELNPMRVLLKIAKSEPPTLSQPSKWSM 243

Query: 149 EVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKATQN 188
           E    ++    K+P  RP  + L +      P V   T N
Sbjct: 244 EFRDFLKTALDKHPETRPSAAQLLE-----HPFVSSVTSN 278

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 2/82 (2%)

Query: 86  WCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR-PE 144
           W   E +  + + + SD W  G T++EM T G  P   ++ +  +  I      +PR P+
Sbjct: 174 WMAPEVINESGYGRKSDIWSIGCTVFEMAT-GKPPLASMDRLAAMFYIGAHRGLMPRLPD 232

Query: 145 ACPVEVYALMRQCWSKNPAERP 166
           +        +  C +++  ERP
Sbjct: 233 SFSAAAIDFVTSCLTRDQHERP 254

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 34.5 bits (80), Expect = 0.004
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           +  L    GD++ I++ D +  WW  ++LST   G  P N
Sbjct: 13  DDDLSFKKGDRLQILD-DSDGDWWLARHLSTGKEGYIPSN 51

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 37.4 bits (87), Expect = 0.004
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%)

Query: 92  LKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM--QILQKIDREGERLPRPEACPVE 149
           L    +   SD W  G+T+ E+ T G  P+        Q+ Q ++    +LP  E    E
Sbjct: 179 LNQKGYDVKSDVWSLGITMIELAT-GRFPYDSWKTPFQQLKQVVEEPSPQLPA-EKFSPE 236

Query: 150 VYALMRQCWSKNPAERPKFSTL 171
               + +C  KN  ERP +  L
Sbjct: 237 FQDFVNKCLKKNYKERPNYPEL 258

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|212753 cd11819, SH3_Cortactin_like, Src homology 3 domain of Cortactin and related proteins

 Score = 34.2 bits (79), Expect = 0.004
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 190 HEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           ++  E+ ++    GD I  IE   E  WW G N +    G+FP N
Sbjct: 8   YQAAEDNEISFVEGDIITQIEQIDE-GWWLGVN-AKGQKGLFPAN 50

This subfamily includes cortactin, Abp1 (actin-binding protein 1), hematopoietic lineage cell-specific protein 1 (HS1), and similar proteins. These proteins are involved in regulating actin dynamics through direct or indirect interaction with the Arp2/3 complex, which is required to initiate actin polymerization. They all contain at least one C-terminal SH3 domain. Cortactin and HS1 bind Arp2/3 and actin through an N-terminal region that contains an acidic domain and several copies of a repeat domain found in cortactin and HS1. Abp1 binds actin via an N-terminal actin-depolymerizing factor (ADF) homology domain. Yeast Abp1 binds Arp2/3 directly through two acidic domains. Mammalian Abp1 does not directly interact with Arp2/3; instead, it regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. The C-terminal region of these proteins acts as an adaptor or scaffold that can connect membrane trafficking and signaling proteins that bind the SH3 domain within the actin network. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	251
KOG0199|consensus	1039		100.0
KOG0197|consensus	468		100.0
KOG0581|consensus	364		100.0
KOG0192|consensus	362		100.0
KOG0575|consensus	592		100.0
KOG0592|consensus	604		100.0
KOG0615|consensus	475		100.0
KOG0198|consensus	313		100.0
KOG0591|consensus	375		100.0
KOG0583|consensus	370		100.0
KOG0598|consensus	357		100.0
KOG4721|consensus	904		100.0
KOG1095|consensus	1025		100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
KOG0578|consensus	550		100.0
KOG1026|consensus	774		100.0
KOG0588|consensus	786		100.0
KOG0033|consensus	355		100.0
KOG4257|consensus	974		100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG0595|consensus	429		100.0
KOG0616|consensus	355		100.0
KOG0201|consensus	467		100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
KOG0585|consensus	576		100.0
KOG0605|consensus	550		100.0
KOG4278|consensus	1157		100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0593|consensus	396		100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
KOG0599|consensus	411		100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
KOG0694|consensus	694		100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
KOG0193|consensus	678		100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
KOG0196|consensus	996		100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.98
KOG0194|consensus	474		99.98
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.98
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.98
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.98
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.98
PTZ00267	478	NIMA-related protein kinase; Provisional	99.98
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.98
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.98
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.98
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.98
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.98
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.98
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.98
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.98
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.98
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.98
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.98
KOG0589|consensus	426		99.98
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.97
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.97
KOG0660|consensus	359		99.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.97
KOG0597|consensus	808		99.97
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.97
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.97
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.97
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.97
KOG0663|consensus	419		99.97
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.97
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.97
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.97
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.97
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.97
KOG0600|consensus	560		99.97
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.97
KOG0610|consensus	459		99.97
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.97
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.97
KOG0661|consensus	538		99.97
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.97
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.97
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.97
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.97
KOG0200|consensus	609		99.97
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.97
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.97
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.97
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.97
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.97
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.97
KOG0604|consensus	400		99.97
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.97
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.97
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.97
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.97
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.97
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.97
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.97
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.97
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.97
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.97
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.97
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.97
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.97
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.97
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.97
KOG0582|consensus	516		99.97
KOG0611|consensus	668		99.97
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.97
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.97
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.97
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.97
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.97
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.97
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.97
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.97
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.97
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.97
PTZ00036	440	glycogen synthase kinase; Provisional	99.97
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.97
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.97
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.97
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.97
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.97
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.97
KOG0580|consensus	281		99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.97
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.97
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.97
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.97
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.97
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.97
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.97
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.97
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.97
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.97
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.97
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.97
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.97
KOG4645|consensus	1509		99.97
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.97
KOG0032|consensus	382		99.97
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.97
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.97
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.97
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.97
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.97
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.97
KOG0659|consensus	318		99.97
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.97
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.97
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.97
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.97
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.97
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.97
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.97
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.97
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.97
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.97
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.97
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.97
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.97
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.97
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.97
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.97
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.97
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.97
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.97
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.97
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.97
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.97
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.97
PHA02882	294	putative serine/threonine kinase; Provisional	99.97
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.97
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.97
KOG4717|consensus	864		99.97
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.97
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.97
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.97
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.97
KOG0603|consensus	612		99.97
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.97
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.97
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.97
KOG0594|consensus	323		99.97
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.97
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.97
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.97
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.97
KOG0983|consensus	391		99.97
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.96
KOG4279|consensus	1226		99.96
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.96
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.96
PHA03212	391	serine/threonine kinase US3; Provisional	99.96
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.96
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.96
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.96
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.96
KOG1094|consensus	807		99.96
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.96
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.96
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.96
KOG0612|consensus	1317		99.96
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.96
KOG0690|consensus	516		99.96
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.96
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.96
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.96
PTZ00284	467	protein kinase; Provisional	99.96
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.96
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.96
KOG0596|consensus	677		99.96
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.96
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.96
KOG1187|consensus	361		99.96
KOG0696|consensus	683		99.96
KOG0658|consensus	364		99.96
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.96
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.96
KOG1989|consensus	738		99.96
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.96
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.96
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.96
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.96
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.96
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.96
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.96
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.96
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.96
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.96
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.96
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.96
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.96
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.96
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.96
PHA03207	392	serine/threonine kinase US3; Provisional	99.96
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.96
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.96
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.96
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.96
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.96
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.96
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.96
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.96
KOG1025|consensus	1177		99.96
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.96
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.96
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.96
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.96
KOG0579|consensus	1187		99.96
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.96
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.96
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.96
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.96
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.96
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.96
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.96
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.96
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.96
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.96
KOG1024|consensus	563		99.96
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.96
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.96
KOG0614|consensus	732		99.96
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.96
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.96
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.96
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.96
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.96
PHA03209	357	serine/threonine kinase US3; Provisional	99.96
KOG1035|consensus	1351		99.96
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.96
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.96
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.96
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.95
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.95
PHA03210	501	serine/threonine kinase US3; Provisional	99.95
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.95
KOG0577|consensus	948		99.95
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.95
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.95
KOG0584|consensus	632		99.95
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.95
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.95
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.95
PHA03211	461	serine/threonine kinase US3; Provisional	99.95
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.95
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.95
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.95
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.95
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.95
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.95
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.95
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.95
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.95
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.95
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.95
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.95
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.95
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.95
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.95
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.95
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.95
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.95
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.95
KOG0667|consensus	586		99.95
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.95
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.95
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.95
KOG0586|consensus	596		99.95
KOG2345|consensus	302		99.95
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.95
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.95
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.95
KOG0574|consensus	502		99.95
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.95
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.95
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.95
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.95
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.95
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.95
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.95
KOG3653|consensus	534		99.95
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.95
KOG0986|consensus	591		99.95
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.95
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.95
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.95
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.95
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.95
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.95
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.95
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.95
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.95
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.95
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.94
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.94
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.94
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.94
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.94
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.94
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.94
PLN00181	793	protein SPA1-RELATED; Provisional	99.94
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.94
PLN00009	294	cyclin-dependent kinase A; Provisional	99.94
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.94
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.94
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.94
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.94
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.94
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.94
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.94
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.94
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.94
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.94
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.94
KOG2052|consensus	513		99.94
KOG1006|consensus	361		99.93
KOG1027|consensus	903		99.93
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.93
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.93
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.93
KOG0664|consensus	449		99.93
KOG4250|consensus	732		99.93
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.93
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.93
KOG0665|consensus	369		99.93
KOG0607|consensus	463		99.93
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.92
KOG0669|consensus	376		99.92
KOG0666|consensus	438		99.92
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.92
KOG4236|consensus	888		99.92
KOG0608|consensus	1034		99.91
KOG0587|consensus	953		99.91
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.91
KOG0671|consensus	415		99.91
KOG0695|consensus	593		99.91
KOG0662|consensus	292		99.91
KOG0984|consensus	282		99.9
KOG1345|consensus	378		99.9
KOG0670|consensus	752		99.87
KOG1151|consensus	775		99.87
KOG0668|consensus	338		99.86
KOG0590|consensus	601		99.85
KOG0576|consensus	829		99.84
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.82
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.79
KOG1167|consensus	418		99.78
KOG0606|consensus	1205		99.78
KOG4158|consensus	598		99.77
KOG1023|consensus	484		99.77
KOG0195|consensus	448		99.76
KOG1152|consensus	772		99.74
KOG1033|consensus	516		99.74
KOG1164|consensus	322		99.71
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.71
KOG0603|consensus	612		99.7
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.7
KOG1240|consensus	1431		99.69
KOG1163|consensus	341		99.67
KOG1165|consensus	449		99.66
PRK09188	365	serine/threonine protein kinase; Provisional	99.53
KOG0590|consensus	601		99.48
PRK12274	218	serine/threonine protein kinase; Provisional	99.48
KOG1290|consensus	590		99.42
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.38
KOG1166|consensus	974		99.2
KOG0606|consensus	1205		99.18
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.15
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.12
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.05
KOG1266|consensus	458		99.04
KOG0601|consensus	524		99.03
KOG2137|consensus	700		99.01
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.99
PRK10345	210	hypothetical protein; Provisional	98.94
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.92
smart00090	237	RIO RIO-like kinase.	98.9
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.89
PRK14879	211	serine/threonine protein kinase; Provisional	98.86
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.85
COG4248	637	Uncharacterized protein with protein kinase and he	98.56
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.52
KOG0601|consensus	524		98.5
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.34
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.34
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.24
KOG1243|consensus	690		98.16
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.04
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.92
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.85
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.83
KOG3087|consensus	229		97.64
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	97.56
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	97.32
KOG1290|consensus	590		97.19
COG0478	304	RIO-like serine/threonine protein kinase fused to	96.98
PRK09902	216	hypothetical protein; Provisional	96.77
KOG3741|consensus	655		96.24
KOG1035|consensus	1351		96.16
KOG0576|consensus	829		95.88
KOG1826|consensus	2724		95.03
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	94.96
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	94.57
PRK05231	319	homoserine kinase; Provisional	94.29
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	93.47
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	93.45
PRK10271	188	thiK thiamine kinase; Provisional	93.17
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	93.02
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	92.93
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	92.6
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	92.47
PF01636	239	APH: Phosphotransferase enzyme family This family	92.45
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	92.44
KOG1093|consensus	725		92.3
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	92.09
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	91.96
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	91.93
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	91.37
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	91.36
COG0510	269	ycfN Thiamine kinase and related kinases [Coenzyme	90.82
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	90.69
COG0661	517	AarF Predicted unusual protein kinase [General fun	90.4
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	90.37
COG2334	331	Putative homoserine kinase type II (protein kinase	90.11
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	89.78
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	89.7
PLN02236	344	choline kinase	89.08
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	88.94
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	88.65
PHA03111	444	Ser/Thr kinase; Provisional	88.53
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	88.0
KOG1235|consensus	538		87.61
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	86.19
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	85.81
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	85.73
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	85.37
PRK06148	1013	hypothetical protein; Provisional	85.06
KOG2268|consensus	465		84.75
PRK11768	325	serine/threonine protein kinase; Provisional	83.08
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	81.84
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	81.55
PF02958	294	EcKinase: Ecdysteroid kinase; InterPro: IPR004119	80.29

>KOG0199|consensus

Probab=100.00  E-value=1.6e-45  Score=319.81  Aligned_cols=241  Identities=38%  Similarity=0.739  Sum_probs=209.2

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc--
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS--   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~--   69 (251)
                      |.+|+|++|+|++.+...         +..++.|+++|+.||.++++|||||-..|  +++.....+|||||||.+.+  
T Consensus       187 MV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARN--lllasprtVKI~DFGLmRaLg~  264 (1039)
T KOG0199|consen  187 MVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARN--LLLASPRTVKICDFGLMRALGE  264 (1039)
T ss_pred             HHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh--heecccceeeeecccceeccCC
Confidence            789999999999988762         23456788899999999999999999999  99998999999999999984  


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      ..+.|........++.|+|||.++...|+.++|||+|||++|||+++|+.||.|....+++++|. .+.+++.|+.|+++
T Consensus       265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpRPk~csed  343 (1039)
T KOG0199|consen  265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPRPKYCSED  343 (1039)
T ss_pred             CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCCCCCChHH
Confidence            45567788888889999999999999999999999999999999999999999999999999995 89999999999999


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHH--hhcHHHHHhhhhccccccCCcccccCCCeEEEecCCCCCCcccccccceee
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLY--RLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN  227 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (251)
                      +++++.+||+.+|++||||..|.+.+-  ...+.......   ...+.+.+.+..++.++++++.+..+||+|||.|+++
T Consensus       344 IY~imk~cWah~paDRptFsair~~~~l~eaqp~~a~~~~---d~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~k  420 (1039)
T KOG0199|consen  344 IYQIMKNCWAHNPADRPTFSAIREDLVLAEAQPAVARETY---DSIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQK  420 (1039)
T ss_pred             HHHHHHHhccCCccccccHHHHHHhHHHHhcCCceeeeec---cccCCCceeeccCCeEEEEecCCccceeeccccccce
Confidence            999999999999999999999975433  22232222222   4467789999999999999999999999999999999


Q ss_pred             eecccCcccccCcCCCCCCcC
Q psy2787         228 IGMFPRNIMDPMRRKQPDDIS  248 (251)
Q Consensus       228 ~~~~p~~~~~~~~~~~~~~~~  248 (251)
                      +|.||++++. +-..++-.++
T Consensus       421 vG~Fprsvvt-~a~lga~pa~  440 (1039)
T KOG0199|consen  421 VGTFPRSVVT-AATLGAVPAA  440 (1039)
T ss_pred             ecccCcceee-ecccCCCCcc
Confidence            9999999887 4444444443

>KOG0197|consensus

Probab=100.00  E-value=4.9e-42  Score=291.34  Aligned_cols=178  Identities=30%  Similarity=0.637  Sum_probs=164.6

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |++||++.|+|++++...         +..+..||++|++||+++++|||||-..|  ||++++..+||+|||+|+...+
T Consensus       278 IVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARN--iLV~~~~~vKIsDFGLAr~~~d  355 (468)
T KOG0197|consen  278 IVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARN--ILVDEDLVVKISDFGLARLIGD  355 (468)
T ss_pred             EEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhh--eeeccCceEEEcccccccccCC
Confidence            579999999999988762         23456788999999999999999999999  9999999999999999998888


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      +.+........+..|.|||.+..+.|+.+|||||||++||||+|.|+.||.+.+..+..+.+ ..|.+++.|+.||.++.
T Consensus       356 ~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~l-e~GyRlp~P~~CP~~vY  434 (468)
T KOG0197|consen  356 DEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELL-ERGYRLPRPEGCPDEVY  434 (468)
T ss_pred             CceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHH-hccCcCCCCCCCCHHHH
Confidence            88888888888999999999999999999999999999999999999999999999999998 68999999999999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ++|..||..+|++|||++.+...+..+...
T Consensus       435 ~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  435 ELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             HHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            999999999999999999998888877543

>KOG0581|consensus

Probab=100.00  E-value=3.9e-41  Score=274.62  Aligned_cols=171  Identities=19%  Similarity=0.278  Sum_probs=149.7

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.|||++.|+|...+..       .+.++..++++||.|||. .+||||||||+|  +|++.+|.+||||||.++.+.+.
T Consensus       155 I~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsN--lLvNskGeVKicDFGVS~~lvnS  232 (364)
T KOG0581|consen  155 ICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSN--LLVNSKGEVKICDFGVSGILVNS  232 (364)
T ss_pred             eehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHH--eeeccCCCEEeccccccHHhhhh
Confidence            46899999999997764       234566777899999995 999999999999  99999999999999999987665


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----ChhHHHHHHHhcCCCCCCCCC-C
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL-----NGMQILQKIDREGERLPRPEA-C  146 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~~~-~  146 (251)
                         ...+..||..|||||.+.+..|+.++||||||++++|+++ |+.||...     +..+++..|+ .+..+..|.. +
T Consensus       233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~-GrfP~~~~~~~~~~~~~Ll~~Iv-~~ppP~lP~~~f  307 (364)
T KOG0581|consen  233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAI-GRFPYPPPNPPYLDIFELLCAIV-DEPPPRLPEGEF  307 (364)
T ss_pred             ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhh-CCCCCCCcCCCCCCHHHHHHHHh-cCCCCCCCcccC
Confidence               6678899999999999999999999999999999999999 99999764     5567788885 4555556665 9


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++++++++..||.+||.+|||+.++++|.+-.
T Consensus       308 S~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~  339 (364)
T KOG0581|consen  308 SPEFRSFVSCCLRKDPSERPSAKQLLQHPFIK  339 (364)
T ss_pred             CHHHHHHHHHHhcCCcccCCCHHHHhcCHHHh
Confidence            99999999999999999999999999987654

>KOG0192|consensus

Probab=100.00  E-value=1.6e-39  Score=275.12  Aligned_cols=180  Identities=22%  Similarity=0.408  Sum_probs=157.1

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCC-cccCCCCCCCceEEEccCC-ceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNN-ICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~-iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~   69 (251)
                      +++||+++|+|.+.+...         +.+++-++++||+|||+++ ||||||||+|  +|++.++ ++||||||+++..
T Consensus       117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~N--iLv~~~~~~~KI~DFGlsr~~  194 (362)
T KOG0192|consen  117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDN--ILVDLKGKTLKIADFGLSREK  194 (362)
T ss_pred             EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhh--EEEcCCCCEEEECCCccceee
Confidence            468999999999988652         1233556779999999999 9999999999  9999998 9999999999875


Q ss_pred             CCCceeecCCCCcCcccCCCcccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCc
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLK--HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      .... .......||..|||||++.  ...|+.|+||||||+++|||+| |+.||.+....+....+...+.++..+..++
T Consensus       195 ~~~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t-~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~  272 (362)
T KOG0192|consen  195 VISK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLT-GEIPFEDLAPVQVASAVVVGGLRPPIPKECP  272 (362)
T ss_pred             cccc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhcCCCCCCCccCC
Confidence            4332 2233478899999999999  5689999999999999999999 9999999988888888888899999998899


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMK  184 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~~  184 (251)
                      +.+..++..||..||+.||++.+++..|..+......
T Consensus       273 ~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  273 PHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             HHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            9999999999999999999999999999988776543

>KOG0575|consensus

Probab=100.00  E-value=1.8e-38  Score=272.80  Aligned_cols=171  Identities=18%  Similarity=0.252  Sum_probs=153.0

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |..|+|+.++|.+..+.       .++.++.||+.||.|||+++|||||||..|  ++++++.++||+|||||.....+.
T Consensus        95 ivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGN--lfL~~~~~VKIgDFGLAt~le~~~  172 (592)
T KOG0575|consen   95 IVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGN--LFLNENMNVKIGDFGLATQLEYDG  172 (592)
T ss_pred             EEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhh--eeecCcCcEEecccceeeeecCcc
Confidence            46899999999997662       356678999999999999999999999999  999999999999999999866442


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       ....+.+||+.|.|||++.....+..+||||+||++|.|+. |++||...+..+.+.+|....+..  |.+++.++++|
T Consensus       173 -Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~-G~PPFetk~vkety~~Ik~~~Y~~--P~~ls~~A~dL  248 (592)
T KOG0575|consen  173 -ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLV-GRPPFETKTVKETYNKIKLNEYSM--PSHLSAEAKDL  248 (592)
T ss_pred             -cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhh-CCCCcccchHHHHHHHHHhcCccc--ccccCHHHHHH
Confidence             24567899999999999999899999999999999999999 999999999999999997665555  45899999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      |.++|+.+|.+|||+++|+.|-..
T Consensus       249 I~~lL~~~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  249 IRKLLRPNPSERPSLDEVLDHPFF  272 (592)
T ss_pred             HHHHhcCCcccCCCHHHHhcCHhh
Confidence            999999999999999999988654

>KOG0592|consensus

Probab=100.00  E-value=2.4e-38  Score=268.64  Aligned_cols=171  Identities=18%  Similarity=0.259  Sum_probs=149.1

Q ss_pred             CcccccchhHHHHHhcC------C-CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE------P-CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~------~-~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+|||++|+|++++..      . .+.+..||+.||+|||++|||||||||+|  ||+++++++||+|||.|+.+....
T Consensus       151 FvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPEN--ILLd~dmhikITDFGsAK~l~~~~  228 (604)
T KOG0592|consen  151 FVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPEN--ILLDKDGHIKITDFGSAKILSPSQ  228 (604)
T ss_pred             EEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhh--eeEcCCCcEEEeeccccccCChhh
Confidence            36899999999997753      2 34567788899999999999999999999  999999999999999999854321


Q ss_pred             e----------ee--cCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC
Q psy2787          74 Y----------VM--TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP  141 (251)
Q Consensus        74 ~----------~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~  141 (251)
                      .          ..  ..+..||..|.+||++..+..+..+|+|+||||+|.|+. |.+||.+.+.-.++++|..-  ...
T Consensus       229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmla-G~PPFra~NeyliFqkI~~l--~y~  305 (604)
T KOG0592|consen  229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLA-GQPPFRAANEYLIFQKIQAL--DYE  305 (604)
T ss_pred             ccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhc-CCCCCccccHHHHHHHHHHh--ccc
Confidence            1          11  245789999999999999999999999999999999999 99999999998999998654  445


Q ss_pred             CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         142 RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+++.++.+.+|+.+.|..||.+|+++++|.+|..
T Consensus       306 fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpF  340 (604)
T KOG0592|consen  306 FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPF  340 (604)
T ss_pred             CCCCCCHHHHHHHHHHHccCccccccHHHHhhCcc
Confidence            67789999999999999999999999999998853

>KOG0615|consensus

Probab=100.00  E-value=3e-39  Score=266.23  Aligned_cols=176  Identities=13%  Similarity=0.155  Sum_probs=148.3

Q ss_pred             CcccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC---CceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS---SSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~---~~~kl~DFGla~~~~   70 (251)
                      |.+||.+.|+|+++.-       +.++-++.|++.|+.|||++||+||||||+|  ||+..+   -.+||+|||+|+..+
T Consensus       253 mVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeN--ILl~~~~e~~llKItDFGlAK~~g  330 (475)
T KOG0615|consen  253 MVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPEN--ILLSNDAEDCLLKITDFGLAKVSG  330 (475)
T ss_pred             EEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcce--EEeccCCcceEEEecccchhhccc
Confidence            7899999999999653       4567789999999999999999999999999  888666   689999999999876


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCC---CchhHHHHHHHHHHHHHhCCCCCCCCCChhH-HHHHHHhcCCCCC--CCC
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQF---SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ-ILQKIDREGERLP--RPE  144 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~---~~~~Di~S~G~il~el~~~g~~pf~~~~~~~-~~~~i~~~~~~~~--~~~  144 (251)
                      ..  ....+.+||+.|.|||++.+..+   ..++|+||+||++|-+++ |.+||.+..... +.+.|....+..-  ...
T Consensus       331 ~~--sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLs-G~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~  407 (475)
T KOG0615|consen  331 EG--SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLS-GYPPFSEEYTDPSLKEQILKGRYAFGPLQWD  407 (475)
T ss_pred             cc--eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEec-cCCCcccccCCccHHHHHhcCcccccChhhh
Confidence            43  24567899999999999987653   358899999999999999 999998765544 6777765555443  336


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .++++..+||.+||..||++|||++++++|.|-....
T Consensus       408 ~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  408 RISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             hhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            6899999999999999999999999999999876433

>KOG0198|consensus

Probab=100.00  E-value=3.7e-38  Score=259.86  Aligned_cols=178  Identities=19%  Similarity=0.335  Sum_probs=146.7

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-CCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-SSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.|+|.+.+....        .++.+|+++||+|||++||+||||||+|  ||++. ++.+||+|||+++....
T Consensus        93 i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~N--iLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   93 IFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPAN--ILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             eeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccce--EEEeCCCCeEEeccCcccccccc
Confidence            4689999999998766432        4578888999999999999999999999  99999 79999999999987553


Q ss_pred             --CceeecCCCCcCcccCCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCCC-CChhHHHHHHHhcCCCCCCCCCCc
Q psy2787          72 --DCYVMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAEPWVG-LNGMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        72 --~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~S~G~il~el~~~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                        ..........||+.|||||++.++. ...++||||+||++.||+| |..||.. ....+..-.+......+.+|..++
T Consensus       171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~T-g~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls  249 (313)
T KOG0198|consen  171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLT-GKPPWSEFFEEAEALLLIGREDSLPEIPDSLS  249 (313)
T ss_pred             ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccC-CCCcchhhcchHHHHHHHhccCCCCCCCcccC
Confidence              2122344578999999999999633 3459999999999999999 9999987 344444455555555668888999


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .++++++.+|+..+|++|||+.++++|.......
T Consensus       250 ~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  250 DEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence            9999999999999999999999999998765433

>KOG0591|consensus

Probab=100.00  E-value=9.1e-38  Score=246.54  Aligned_cols=167  Identities=17%  Similarity=0.310  Sum_probs=143.8

Q ss_pred             cccccchhHHHHHhcC-----------CCCCCCchhhHHhhhhhh--CC--cccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           2 SANFAELNAFQENYTE-----------PCRKPLPPERRGYGTFSV--NN--ICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~-----------~~~~~~~~~~~gl~~lH~--~~--iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      .+|||+.|||....++           ...+++.|+++||.++|+  ..  |+||||||.|  |+++.+|.+||+|||++
T Consensus        98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaN--IFl~~~gvvKLGDfGL~  175 (375)
T KOG0591|consen   98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPAN--IFLTANGVVKLGDFGLG  175 (375)
T ss_pred             HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchh--eEEcCCCceeeccchhH
Confidence            5899999999874332           235678899999999999  44  9999999999  99999999999999999


Q ss_pred             cccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC-CC
Q psy2787          67 RYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP-EA  145 (251)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~  145 (251)
                      +++.... ....+..||+.||+||.+.+.+|+.+|||||+||++|||+. -..||.|.+-.++..+|.+. ..++.| ..
T Consensus       176 r~l~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMca-L~~PF~g~n~~~L~~KI~qg-d~~~~p~~~  252 (375)
T KOG0591|consen  176 RFLSSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCA-LQSPFYGDNLLSLCKKIEQG-DYPPLPDEH  252 (375)
T ss_pred             hHhcchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHh-cCCCcccccHHHHHHHHHcC-CCCCCcHHH
Confidence            9977653 34567899999999999999999999999999999999999 89999999988999999655 444455 78


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKD  173 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~  173 (251)
                      .+.++..++..|++.||+.||+...++.
T Consensus       253 YS~~l~~li~~ci~vd~~~RP~t~~~v~  280 (375)
T KOG0591|consen  253 YSTDLRELINMCIAVDPEQRPDTVPYVQ  280 (375)
T ss_pred             hhhHHHHHHHHHccCCcccCCCcchHHH
Confidence            9999999999999999999998443333

>KOG0583|consensus

Probab=100.00  E-value=3.9e-37  Score=262.42  Aligned_cols=173  Identities=16%  Similarity=0.222  Sum_probs=151.7

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~~~   72 (251)
                      |.+||+..|+|+++...       .+++++.|++.|++|||++||+||||||+|  +|++.+ +.+||+|||++.... .
T Consensus        97 ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~EN--illd~~~~~~Kl~DFG~s~~~~-~  173 (370)
T KOG0583|consen   97 IVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPEN--ILLDGNEGNLKLSDFGLSAISP-G  173 (370)
T ss_pred             EEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHH--EEecCCCCCEEEeccccccccC-C
Confidence            57999999999997765       456789999999999999999999999999  999999 999999999999863 2


Q ss_pred             ceeecCCCCcCcccCCCcccCCCC-CC-chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCC-cHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQ-FS-QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEAC-PVE  149 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~-~~-~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~~  149 (251)
                      ......+.+|++.|+|||++.+.. |+ .++||||+|++||.|++ |..||.+.+...++..+...  ....|..+ +.+
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~-G~~PF~d~~~~~l~~ki~~~--~~~~p~~~~S~~  250 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLC-GRLPFDDSNVPNLYRKIRKG--EFKIPSYLLSPE  250 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHh-CCCCCCCccHHHHHHHHhcC--CccCCCCcCCHH
Confidence            223556789999999999999877 75 89999999999999999 99999998888888887544  45556667 999


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +..++.+|+..||.+|+++.+++.|-|-..
T Consensus       251 ~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  251 ARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            999999999999999999999998877665

>KOG0598|consensus

Probab=100.00  E-value=3.6e-37  Score=251.34  Aligned_cols=170  Identities=18%  Similarity=0.222  Sum_probs=145.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||+.+|+|...+++.       .+.++.+++.||.|||++|||||||||+|  ||++..|+++|+|||+|+......
T Consensus       102 lVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPEN--ILLd~~GHi~LtDFgL~k~~~~~~  179 (357)
T KOG0598|consen  102 LVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPEN--ILLDEQGHIKLTDFGLCKEDLKDG  179 (357)
T ss_pred             EEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHH--eeecCCCcEEEeccccchhcccCC
Confidence            468999999999877744       34567788999999999999999999999  999999999999999999733221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       ....+.+||+.|||||++.+..++..+|.||+|+++|||++ |.+||.+.+...+.++|.... ....+...+.+.+++
T Consensus       180 -~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~-G~pPF~~~~~~~~~~~I~~~k-~~~~p~~ls~~ardl  256 (357)
T KOG0598|consen  180 -DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLT-GKPPFYAEDVKKMYDKILKGK-LPLPPGYLSEEARDL  256 (357)
T ss_pred             -CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhh-CCCCCcCccHHHHHHHHhcCc-CCCCCccCCHHHHHH
Confidence             13445799999999999999999999999999999999999 999999999999999996543 344455689999999


Q ss_pred             HHHHhccCCCCCC----CHHHHHHHH
Q psy2787         154 MRQCWSKNPAERP----KFSTLKDCL  175 (251)
Q Consensus       154 i~~cl~~dP~~Rp----s~~~il~~l  175 (251)
                      +++++..||++|.    ++.+|..|.
T Consensus       257 l~~LL~rdp~~RLg~~~d~~~ik~Hp  282 (357)
T KOG0598|consen  257 LKKLLKRDPRQRLGGPGDAEEIKRHP  282 (357)
T ss_pred             HHHHhccCHHHhcCCCCChHHhhcCc
Confidence            9999999999995    567766654

>KOG4721|consensus

Probab=100.00  E-value=2.4e-37  Score=263.99  Aligned_cols=179  Identities=22%  Similarity=0.424  Sum_probs=154.3

Q ss_pred             CcccccchhHHHHHhcCCCCC-------CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPCRK-------PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~-------~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      ++||||.-|+|.+.+++...-       -..+|+.|+.|||.++|||||||+-|  ||+..+..+||+|||.++...+..
T Consensus       189 IiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPN--iLIs~~d~VKIsDFGTS~e~~~~S  266 (904)
T KOG4721|consen  189 IIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPN--ILISYDDVVKISDFGTSKELSDKS  266 (904)
T ss_pred             EeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCc--eEeeccceEEeccccchHhhhhhh
Confidence            479999999999988754321       13466789999999999999999999  999999999999999999865542


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                        ..-...||..|||||++.+.+.+.|+||||||||||||+| |..||.+.+...+..-+-.....++.|..||..++-|
T Consensus       267 --TkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT-~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL  343 (904)
T KOG4721|consen  267 --TKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLT-GEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLL  343 (904)
T ss_pred             --hhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHh-cCCCccccchheeEEeccCCcccccCcccCchHHHHH
Confidence              2345789999999999999999999999999999999999 9999998887666666655566678899999999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHhhcHHHHH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYRLTPAVMK  184 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~~~~~~~~  184 (251)
                      +++||...|.+||+|++++.||.-..+.+..
T Consensus       344 ~Kqcw~sKpRNRPSFrqil~HldIa~pell~  374 (904)
T KOG4721|consen  344 LKQCWNSKPRNRPSFRQILLHLDIASPELLS  374 (904)
T ss_pred             HHHHHhcCCCCCccHHHHHHHHhhcCHHHhc
Confidence            9999999999999999999999876655543

>KOG1095|consensus

Probab=100.00  E-value=3.1e-36  Score=276.26  Aligned_cols=180  Identities=28%  Similarity=0.546  Sum_probs=158.7

Q ss_pred             CcccccchhHHHHHhcCCCC--------------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      +.+||+..|||+.++++.+.              .+..++++|+.||+++++|||||...|  +|++...++||+|||+|
T Consensus       772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRN--CLL~~~r~VKIaDFGlA  849 (1025)
T KOG1095|consen  772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARN--CLLDERRVVKIADFGLA  849 (1025)
T ss_pred             EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhh--eeecccCcEEEcccchh
Confidence            36899999999999887632              234466799999999999999999999  99999999999999999


Q ss_pred             cc-cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q psy2787          67 RY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEA  145 (251)
Q Consensus        67 ~~-~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  145 (251)
                      +. +..+.+........+.+|||||.+..+.|+.|+|||||||++||++++|..||.+.++.++...+...+ +++.|..
T Consensus       850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P~~  928 (1025)
T KOG1095|consen  850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPPSY  928 (1025)
T ss_pred             HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCCCC
Confidence            96 555555555555778899999999999999999999999999999999999999999999998876666 9999999


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      ||..++++|.+||..+|++||++..|++.+..+.....
T Consensus       929 CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~  966 (1025)
T KOG1095|consen  929 CPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL  966 (1025)
T ss_pred             CChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence            99999999999999999999999999998877766544

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=3.1e-35  Score=250.03  Aligned_cols=156  Identities=30%  Similarity=0.566  Sum_probs=128.8

Q ss_pred             CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          23 LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        23 ~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                      +.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+++..... .........++..|+|||++.+..++.++
T Consensus       180 ~~qi~~aL~~LH~~~ivHrDiKp~N--il~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~s  257 (338)
T cd05102         180 SFQVARGMEFLASRKCIHRDLAARN--ILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQS  257 (338)
T ss_pred             HHHHHHHHHHHHHCCEECCCCccce--EEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCccc
Confidence            3488999999999999999999999  99999999999999999864322 22223344566789999999988899999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         102 DAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       102 Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      |||||||++|||++.|..||.+....+........+.....+..+++++.+++.+||+.||++|||+.++++.|+.+..
T Consensus       258 DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         258 DVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             CHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999669999988654433333334555566667889999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0578|consensus

Probab=100.00  E-value=5.8e-36  Score=255.51  Aligned_cols=172  Identities=18%  Similarity=0.283  Sum_probs=145.9

Q ss_pred             CcccccchhHHHHHhcCCC------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEPC------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.|||++.|+|.+.....+      ...-++++.||+|||.+||+|||||.+|  ||++.+|.+||+|||+|..+.....
T Consensus       347 VVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDn--ILL~~~g~vKltDFGFcaqi~~~~~  424 (550)
T KOG0578|consen  347 VVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDN--ILLTMDGSVKLTDFGFCAQISEEQS  424 (550)
T ss_pred             EEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccce--eEeccCCcEEEeeeeeeeccccccC
Confidence            3689999999888665442      2234566789999999999999999999  9999999999999999998765543


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~l  153 (251)
                       ...+-.||+.|||||++....|+.+.||||||++++||+- |++||-..+....+..|...+ .....++.+++.++++
T Consensus       425 -KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMve-GEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdF  502 (550)
T KOG0578|consen  425 -KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDF  502 (550)
T ss_pred             -ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhc-CCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHH
Confidence             5567789999999999999999999999999999999999 999998766666566664443 3345668899999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+||..|+++|+++.++|+|-.
T Consensus       503 L~~cL~~dv~~RasA~eLL~HpF  525 (550)
T KOG0578|consen  503 LDRCLVVDVEQRASAKELLEHPF  525 (550)
T ss_pred             HHHHhhcchhcCCCHHHHhcChh
Confidence            99999999999999999999853

>KOG1026|consensus

Probab=100.00  E-value=1.7e-35  Score=263.08  Aligned_cols=178  Identities=29%  Similarity=0.600  Sum_probs=158.6

Q ss_pred             CcccccchhHHHHHhcCCC---------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceE
Q psy2787           1 MSANFAELNAFQENYTEPC---------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSS   59 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~k   59 (251)
                      |.-||+..|||.+++....                     ..+..||+.|++||-++.++||||-..|  +|+.++..||
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRN--CLVge~l~VK  643 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRN--CLVGENLVVK  643 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhh--ceeccceEEE
Confidence            6789999999999764210                     1235788899999999999999999999  9999999999


Q ss_pred             EccCCCCcc-cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC
Q psy2787          60 SGDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE  138 (251)
Q Consensus        60 l~DFGla~~-~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~  138 (251)
                      |+|||++|. +..+.|+.......+.+||+||.+..++|+.+||||||||+|||++++|..||.+.++++..+.+. .+.
T Consensus       644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~-~g~  722 (774)
T KOG1026|consen  644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR-AGQ  722 (774)
T ss_pred             ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH-cCC
Confidence            999999998 666666666677889999999999999999999999999999999999999999999999999985 555


Q ss_pred             CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         139 RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      -++.|++||.++++||..||+.+|++||++++|-..|......
T Consensus       723 lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~  765 (774)
T KOG1026|consen  723 LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA  765 (774)
T ss_pred             cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence            6999999999999999999999999999999999999776543

>KOG0588|consensus

Probab=100.00  E-value=4.6e-36  Score=259.89  Aligned_cols=170  Identities=17%  Similarity=0.249  Sum_probs=150.4

Q ss_pred             cccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      ..||++.|.|++++-       ....+|++||+.|+.|+|..+||||||||+|  +|++.++.+||+|||+|-.-..+. 
T Consensus        90 vlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpEN--lLLd~~~nIKIADFGMAsLe~~gk-  166 (786)
T KOG0588|consen   90 VLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPEN--LLLDVKNNIKIADFGMASLEVPGK-  166 (786)
T ss_pred             EEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchh--hhhhcccCEeeeccceeecccCCc-
Confidence            579999999999653       3456799999999999999999999999999  999999999999999998743332 


Q ss_pred             eecCCCCcCcccCCCcccCCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFS-QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       ...+-+|.+.|+|||++.|.+|. .++||||+|||||.+++ |++||++.+...++.++.++  .+..|..++.++++|
T Consensus       167 -lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLt-G~LPFdDdNir~LLlKV~~G--~f~MPs~Is~eaQdL  242 (786)
T KOG0588|consen  167 -LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLT-GKLPFDDDNIRVLLLKVQRG--VFEMPSNISSEAQDL  242 (786)
T ss_pred             -cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHh-CCCCCCCccHHHHHHHHHcC--cccCCCcCCHHHHHH
Confidence             45667899999999999998875 89999999999999999 99999999999999998655  445568899999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +.+|+..||+.|.|.++|++|.+-.
T Consensus       243 Lr~ml~VDp~~RiT~~eI~kHP~l~  267 (786)
T KOG0588|consen  243 LRRMLDVDPSTRITTEEILKHPFLS  267 (786)
T ss_pred             HHHHhccCccccccHHHHhhCchhh
Confidence            9999999999999999999998744

>KOG0033|consensus

Probab=100.00  E-value=2.3e-35  Score=229.00  Aligned_cols=175  Identities=15%  Similarity=0.204  Sum_probs=148.3

Q ss_pred             CcccccchhHHHH-------HhcCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC---CceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQE-------NYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS---SSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~-------~~~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~---~~~kl~DFGla~~~~   70 (251)
                      |.-|+++.+++..       +.+...-+.++|++.+|.|+|.+||+|||+||+|  +++.+.   --+||+|||+|..+.
T Consensus        87 lvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~n--llLASK~~~A~vKL~~FGvAi~l~  164 (355)
T KOG0033|consen   87 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPEN--LLLASKAKGAAVKLADFGLAIEVN  164 (355)
T ss_pred             EEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhh--eeeeeccCCCceeecccceEEEeC
Confidence            3457777787765       2233445678999999999999999999999999  665432   368999999999876


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~  148 (251)
                      +.  .......||+.|||||+++..+|+..+|||+.|+|+|-++. |.+||.+.+...+++.|....+..+.  .+++++
T Consensus       165 ~g--~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~-G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~  241 (355)
T KOG0033|consen  165 DG--EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV-GYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTP  241 (355)
T ss_pred             Cc--cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHh-CCCCCCCccHHHHHHHHhccccCCCCcccCcCCH
Confidence            33  35567889999999999999999999999999999999999 99999999999999999877666544  478999


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +.++|+++||..||++|.|+.+.++|.|--..
T Consensus       242 ~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  242 EAKSLIRRMLTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             HHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence            99999999999999999999999999875543

>KOG4257|consensus

Probab=100.00  E-value=8.3e-36  Score=256.82  Aligned_cols=178  Identities=30%  Similarity=0.642  Sum_probs=163.6

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.||+|++|.|.++++...        ..+-.|++.||+|||+.+++||||-..|  ||+.+..-+||+|||++|.+.++
T Consensus       467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRN--iLVsSp~CVKLaDFGLSR~~ed~  544 (974)
T KOG4257|consen  467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARN--ILVSSPQCVKLADFGLSRYLEDD  544 (974)
T ss_pred             EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhh--eeecCcceeeecccchhhhcccc
Confidence            4689999999999887653        3356788999999999999999999999  99999999999999999999988


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .+...+....+..|||||.++..+|+.++|||.||+++||++.+|..||.+..+.+..-.+ ..|.++|.|++||+.++.
T Consensus       545 ~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i-EnGeRlP~P~nCPp~LYs  623 (974)
T KOG4257|consen  545 AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI-ENGERLPCPPNCPPALYS  623 (974)
T ss_pred             chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEe-cCCCCCCCCCCCChHHHH
Confidence            8888888888999999999999999999999999999999999999999998888777666 589999999999999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ++.+||+++|.+||.+.++...|..+...
T Consensus       624 lmskcWayeP~kRPrftei~~~lsdv~qe  652 (974)
T KOG4257|consen  624 LMSKCWAYEPSKRPRFTEIKAILSDVLQE  652 (974)
T ss_pred             HHHHHhccCcccCCcHHHHHHHHHHHHHH
Confidence            99999999999999999999999888763

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.5e-34  Score=240.20  Aligned_cols=172  Identities=17%  Similarity=0.255  Sum_probs=145.9

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.|+|.+......       ..++.+++.||.|||+ .+++||||||+|  |+++.++.+||+|||+++.....
T Consensus        99 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~n--ill~~~~~~kl~dfg~~~~~~~~  176 (283)
T PHA02988         99 LILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVS--FLVTENYKLKIICHGLEKILSSP  176 (283)
T ss_pred             EEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhh--EEECCCCcEEEcccchHhhhccc
Confidence            4689999999988765321       2344577899999998 489999999999  99999999999999999865433


Q ss_pred             ceeecCCCCcCcccCCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH--NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .    ....++..|+|||++.+  ..++.++|||||||++|||++ |..||.+.+..++...+...+.+++.+..++..+
T Consensus       177 ~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  251 (283)
T PHA02988        177 P----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFT-GKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEI  251 (283)
T ss_pred             c----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHH
Confidence            1    23456778999999976  678999999999999999999 9999999888888877766666777777899999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      .+++.+||+.||++|||+.++++.|..+.
T Consensus       252 ~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        252 KCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             HHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            99999999999999999999999998765

>KOG0595|consensus

Probab=100.00  E-value=1.9e-35  Score=243.72  Aligned_cols=170  Identities=19%  Similarity=0.309  Sum_probs=144.7

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC------CceEEccCCCCc
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS------SSSSSGDFGMMR   67 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~------~~~kl~DFGla~   67 (251)
                      |+||||++|||..++..       .++.|+.|++.||++||+++||||||||+|  ||++..      -.+||+|||+|+
T Consensus        86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQN--iLLs~~~~~~~~~~LKIADFGfAR  163 (429)
T KOG0595|consen   86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQN--ILLSTTARNDTSPVLKIADFGFAR  163 (429)
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcce--EEeccCCCCCCCceEEecccchhh
Confidence            57999999999998764       356789999999999999999999999999  888765      468999999999


Q ss_pred             ccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC-CCCC
Q psy2787          68 YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR-PEAC  146 (251)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~  146 (251)
                      .....  ....+.+|++-|||||++...+|+.|+|+||.|+|+|++++ |+.||...+..+++..+.......+. +..+
T Consensus       164 ~L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~-g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~  240 (429)
T KOG0595|consen  164 FLQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLT-GKPPFDAETPKELLLYIKKGNEIVPVLPAEL  240 (429)
T ss_pred             hCCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHh-CCCCccccCHHHHHHHHhccccccCchhhhc
Confidence            87654  35667899999999999999999999999999999999999 99999999999998887655444443 3446


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +....+++...+..+|.+|.++.+-..+.
T Consensus       241 s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~  269 (429)
T KOG0595|consen  241 SNPLRELLISLLQRNPKDRISFEDFFDHP  269 (429)
T ss_pred             cCchhhhhhHHHhcCccccCchHHhhhhh
Confidence            66778999999999999998877665543

>KOG0616|consensus

Probab=100.00  E-value=4.8e-35  Score=232.44  Aligned_cols=169  Identities=17%  Similarity=0.195  Sum_probs=148.1

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||.+.|.+..++..       .++.+..|++.||+|||+++|++|||||+|  ||+|.+|.+||+|||+|+...+. 
T Consensus       121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPEN--iLlD~~G~iKitDFGFAK~v~~r-  197 (355)
T KOG0616|consen  121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPEN--LLLDQNGHIKITDFGFAKRVSGR-  197 (355)
T ss_pred             EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHH--eeeccCCcEEEEeccceEEecCc-
Confidence            78999999999987653       345667888999999999999999999999  99999999999999999987664 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         +.+.+||+.|+|||++...+++.++|.||||+++|||+. |.+||.+.+..+++++|+.....  .|...+.++++|
T Consensus       198 ---T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMla-G~pPF~~~~~~~iY~KI~~~~v~--fP~~fs~~~kdL  271 (355)
T KOG0616|consen  198 ---TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLA-GYPPFYDDNPIQIYEKILEGKVK--FPSYFSSDAKDL  271 (355)
T ss_pred             ---EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHc-CCCCCcCCChHHHHHHHHhCccc--CCcccCHHHHHH
Confidence               456789999999999999999999999999999999999 99999999999999999876554  456899999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~~  178 (251)
                      +..+++.|-.+|.     -..+|..|-|.-
T Consensus       272 l~~LL~vD~t~R~gnlknG~~dIk~H~wF~  301 (355)
T KOG0616|consen  272 LKKLLQVDLTKRFGNLKNGVEDIKNHPWFK  301 (355)
T ss_pred             HHHHHhhhhHhhhcCcCCCccccccCcccc
Confidence            9999999999992     345666665543

>KOG0201|consensus

Probab=100.00  E-value=5.8e-35  Score=242.65  Aligned_cols=169  Identities=18%  Similarity=0.225  Sum_probs=143.1

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +|||+.+|++++.++..       ..-.++++..||.|||.++.+|||||+.|  |++...|.+||+|||++........
T Consensus        89 iMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaan--il~s~~g~vkl~DfgVa~ql~~~~~  166 (467)
T KOG0201|consen   89 IMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAAN--ILLSESGDVKLADFGVAGQLTNTVK  166 (467)
T ss_pred             HHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccc--eeEeccCcEEEEecceeeeeechhh
Confidence            58999999999866532       23467788899999999999999999999  8898889999999999988766554


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALM  154 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li  154 (251)
                      .. .+..||+.|||||++.+..|+.++||||||++.+||++ |.+||....++..+..| -...++.....+++.+++++
T Consensus       167 rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~-GePP~s~~hPmrvlflI-pk~~PP~L~~~~S~~~kEFV  243 (467)
T KOG0201|consen  167 RR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAK-GEPPHSKLHPMRVLFLI-PKSAPPRLDGDFSPPFKEFV  243 (467)
T ss_pred             cc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhc-CCCCCcccCcceEEEec-cCCCCCccccccCHHHHHHH
Confidence            44 77899999999999998899999999999999999999 99999887765444444 23333334457899999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHH
Q psy2787         155 RQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       155 ~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ..||.+||+.||++.++++|-
T Consensus       244 ~~CL~k~P~~RpsA~~LLKh~  264 (467)
T KOG0201|consen  244 EACLDKNPEFRPSAKELLKHK  264 (467)
T ss_pred             HHHhhcCcccCcCHHHHhhhH
Confidence            999999999999999999874

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=6e-34  Score=235.98  Aligned_cols=173  Identities=27%  Similarity=0.577  Sum_probs=143.6

Q ss_pred             cccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCce
Q psy2787           2 SANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSS   58 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~   58 (251)
                      .+||++.++|.+++....                       ...+.|++.||+|||+++|+||||||+|  |+++.++.+
T Consensus        86 ~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~N--il~~~~~~~  163 (283)
T cd05048          86 LFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARN--CLVGEGLTV  163 (283)
T ss_pred             EEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccce--EEEcCCCcE
Confidence            578888888877664321                       1356778899999999999999999999  999999999


Q ss_pred             EEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC
Q psy2787          59 SSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG  137 (251)
Q Consensus        59 kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~  137 (251)
                      ||+|||+++..... .........++..|+|||++.+..++.++|||||||++|||++.|..||.+....++...+. .+
T Consensus       164 ~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~-~~  242 (283)
T cd05048         164 KISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIR-SR  242 (283)
T ss_pred             EECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cC
Confidence            99999999864322 22233444567789999999888899999999999999999977999999888777777664 45


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ...+.+..++.++.+++.+||+.+|++||++.+|+++|..
T Consensus       243 ~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         243 QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            5556677899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>KOG0585|consensus

Probab=100.00  E-value=5e-35  Score=245.10  Aligned_cols=177  Identities=16%  Similarity=0.211  Sum_probs=149.7

Q ss_pred             CcccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-
Q psy2787           1 MSANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-   72 (251)
                      |..||+..|.+.....       +.++++++.+..||+|||.+|||||||||+|  +|++++|++||+|||.+...... 
T Consensus       187 lVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsN--LLl~~~g~VKIsDFGVs~~~~~~~  264 (576)
T KOG0585|consen  187 LVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSN--LLLSSDGTVKISDFGVSNEFPQGS  264 (576)
T ss_pred             EEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhh--eEEcCCCcEEeeccceeeecccCC
Confidence            5789999888876332       3456788888999999999999999999999  99999999999999999864111 


Q ss_pred             ---ceeecCCCCcCcccCCCcccCCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q psy2787          73 ---CYVMTERKPLPCPWCPMESLKHNQ----FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEA  145 (251)
Q Consensus        73 ---~~~~~~~~~~~~~y~aPE~~~~~~----~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  145 (251)
                         .........||++|+|||.+.++.    .+.+.||||+||+||-++. |+.||.+....+++.+|.......+..+.
T Consensus       265 ~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllf-G~~PF~~~~~~~l~~KIvn~pL~fP~~pe  343 (576)
T KOG0585|consen  265 DEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLF-GQLPFFDDFELELFDKIVNDPLEFPENPE  343 (576)
T ss_pred             ccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhh-ccCCcccchHHHHHHHHhcCcccCCCccc
Confidence               111223478999999999998732    3578999999999999999 99999999999999999877766666667


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +.+.+++||.++|.+||++|.+..+|..|.|....
T Consensus       344 ~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  344 INEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             ccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            88999999999999999999999999999987654

>KOG0605|consensus

Probab=100.00  E-value=9.5e-35  Score=246.64  Aligned_cols=172  Identities=14%  Similarity=0.160  Sum_probs=146.0

Q ss_pred             CcccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC--
Q psy2787           1 MSANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN--   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~--   71 (251)
                      ++|||.+.||+.+.+.       +..+.++.+.+.|++.||+.|+|||||||+|  +|+|..|++||+|||||.-...  
T Consensus       218 LiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdN--lLiD~~GHiKLSDFGLs~gl~~~~  295 (550)
T KOG0605|consen  218 LIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDN--LLIDAKGHIKLSDFGLSTGLDKKH  295 (550)
T ss_pred             EEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhh--eeecCCCCEeeccccccchhhhhh
Confidence            5799999999998543       4566778888999999999999999999999  9999999999999999854210  


Q ss_pred             --------------------Cc------------------------eeecCCCCcCcccCCCcccCCCCCCchhHHHHHH
Q psy2787          72 --------------------DC------------------------YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG  107 (251)
Q Consensus        72 --------------------~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G  107 (251)
                                          ..                        .....+..||+.|||||++.+..|+..+|.||+|
T Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG  375 (550)
T KOG0605|consen  296 RIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLG  375 (550)
T ss_pred             hhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHH
Confidence                                00                        0011247899999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHhccCCCCCC---CHHHHHHHHH
Q psy2787         108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPVEVYALMRQCWSKNPAERP---KFSTLKDCLY  176 (251)
Q Consensus       108 ~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~Rp---s~~~il~~l~  176 (251)
                      ||+|||+. |.+||.+.+..+.+.+|......+..|  ..++.++.+||.+|+. ||++|.   .+++|.+|.+
T Consensus       376 ~ImyEmLv-GyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPf  447 (550)
T KOG0605|consen  376 CIMYEMLV-GYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPF  447 (550)
T ss_pred             HHHHHHHh-CCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCc
Confidence            99999999 999999999999999998876545444  5688999999999999 999996   5788887764

>KOG4278|consensus

Probab=100.00  E-value=2.6e-34  Score=247.75  Aligned_cols=177  Identities=27%  Similarity=0.536  Sum_probs=161.6

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +++||+..|.|++++.+--         ....+||..|++||..+++|||||-..|  +|+.++..+||+|||+++++..
T Consensus       340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARN--CLVgEnhiVKvADFGLsRlMtg  417 (1157)
T KOG4278|consen  340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARN--CLVGENHIVKVADFGLSRLMTG  417 (1157)
T ss_pred             EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh--ccccccceEEeeccchhhhhcC
Confidence            4689999999999887522         2235788899999999999999999999  9999999999999999999999


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      +.|........++.|.|||-+..+.|+.|+|||+||++|||+.|+|-.||+|.+..+.+..+ ..++++..|+.||+.++
T Consensus       418 DTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LL-EkgyRM~~PeGCPpkVY  496 (1157)
T KOG4278|consen  418 DTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLL-EKGYRMDGPEGCPPKVY  496 (1157)
T ss_pred             CceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHH-hccccccCCCCCCHHHH
Confidence            98888777788899999999999999999999999999999999999999999988887766 68999999999999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +||..||.+.|++||++.++.+.++.+..
T Consensus       497 eLMraCW~WsPsDRPsFaeiHqafEtmf~  525 (1157)
T KOG4278|consen  497 ELMRACWNWSPSDRPSFAEIHQAFETMFS  525 (1157)
T ss_pred             HHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence            99999999999999999999999987654

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=4.2e-33  Score=240.20  Aligned_cols=154  Identities=28%  Similarity=0.610  Sum_probs=126.5

Q ss_pred             CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          23 LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        23 ~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                      +.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+++...... ........++..|+|||++.+..++.++
T Consensus       220 ~~qi~~~l~~lH~~~ivH~Dlkp~N--ill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~s  297 (375)
T cd05104         220 SYQVAKGMSFLASKNCIHRDLAARN--ILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFES  297 (375)
T ss_pred             HHHHHHHHHHHHHCCeeccCCchhh--EEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCC
Confidence            3588899999999999999999999  999999999999999998754332 1222334456679999999988899999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         102 DAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       102 Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      |||||||++|||++.|..||.+.............+.+...+...+.++.+++.+||+.||++|||+.++++.|+..
T Consensus       298 Di~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         298 DVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             CHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            99999999999998688999876544433344455555555667889999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.3e-33  Score=243.26  Aligned_cols=155  Identities=28%  Similarity=0.607  Sum_probs=128.0

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCch
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQA  100 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~  100 (251)
                      ++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++...... ........++..|+|||++.+..++.+
T Consensus       217 i~~qi~~aL~yLH~~giiHrDLkp~N--il~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  294 (374)
T cd05106         217 FSSQVAQGMDFLASKNCIHRDVAARN--VLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQ  294 (374)
T ss_pred             HHHHHHHHHHHHHHCCEEeccCchhe--EEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCcc
Confidence            35678899999999999999999999  999999999999999998643332 222233445667999999988889999


Q ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         101 SDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       101 ~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +|||||||++|+|++.|..||...........+...+.....+...+.++.+++.+||+.||++|||+.++++.|+++
T Consensus       295 ~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~  372 (374)
T cd05106         295 SDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ  372 (374)
T ss_pred             ccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence            999999999999996699999876554444444455555566667889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0593|consensus

Probab=100.00  E-value=4.9e-34  Score=227.48  Aligned_cols=170  Identities=21%  Similarity=0.278  Sum_probs=134.4

Q ss_pred             cccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .-||++..=|.+.-.       +..++++.|+++|+.|+|++++|||||||+|  ||++.+|.+||||||+|+.+..+..
T Consensus        79 VFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPEN--ILit~~gvvKLCDFGFAR~L~~pgd  156 (396)
T KOG0593|consen   79 VFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPEN--ILITQNGVVKLCDFGFARTLSAPGD  156 (396)
T ss_pred             EeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhh--eEEecCCcEEeccchhhHhhcCCcc
Confidence            357777655544222       1245788999999999999999999999999  9999999999999999998653321


Q ss_pred             eecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh------------------
Q psy2787          75 VMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR------------------  135 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~------------------  135 (251)
                       ..+.-..|.+|.|||.+.+ .+|+..+||||.||++.||++ |.+-|+|.+..+.+..|..                  
T Consensus       157 -~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~-G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~  234 (396)
T KOG0593|consen  157 -NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLT-GEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF  234 (396)
T ss_pred             -hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhc-CCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence             2223356778999999987 679999999999999999999 9999999887776665533                  


Q ss_pred             -cCCCCCCC----------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         136 -EGERLPRP----------EACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       136 -~~~~~~~~----------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                       .|.+.|.+          +.++.-+.+++..|+..||++|++.++++.|-
T Consensus       235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~  285 (396)
T KOG0593|consen  235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHP  285 (396)
T ss_pred             eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcCh
Confidence             12222222          34556788999999999999999999999764

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=1.1e-32  Score=226.38  Aligned_cols=175  Identities=29%  Similarity=0.578  Sum_probs=144.7

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ...+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++.....
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~n--il~~~~~~~kl~df~~~~~~~~  156 (263)
T cd05052          79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARN--CLVGENHLVKVADFGLSRLMTG  156 (263)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcce--EEEcCCCcEEeCCCcccccccc
Confidence            3578998888888765322         2235678899999999999999999999  9999999999999999987655


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ...........+..|+|||++.+..++.++|||||||++|||+++|..||.+.+..+....+. .......+..++.++.
T Consensus       157 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  235 (263)
T cd05052         157 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KGYRMERPEGCPPKVY  235 (263)
T ss_pred             ceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCCCCCCCCCCHHHH
Confidence            443333334446679999999988899999999999999999976899998887776666653 4455666778999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +++.+||..+|++||++.++++.|+.+
T Consensus       236 ~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         236 ELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0599|consensus

Probab=100.00  E-value=7e-34  Score=223.98  Aligned_cols=176  Identities=16%  Similarity=0.207  Sum_probs=150.8

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .-|+++-|.|.+++...       .+++++|+..|+.|||.++|+||||||+|  ||++++..+||+|||+|..+.... 
T Consensus       101 VFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpEN--ILlddn~~i~isDFGFa~~l~~Ge-  177 (411)
T KOG0599|consen  101 VFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPEN--ILLDDNMNIKISDFGFACQLEPGE-  177 (411)
T ss_pred             hhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhh--eeeccccceEEeccceeeccCCch-
Confidence            35788889999887653       35678889999999999999999999999  999999999999999999865542 


Q ss_pred             eecCCCCcCcccCCCcccCC------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCC
Q psy2787          75 VMTERKPLPCPWCPMESLKH------NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EAC  146 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~  146 (251)
                       .....+||++|.|||.+..      ..|+...|+|++|+|+|.++. |.+||......-++..|.+.++.+..|  .++
T Consensus       178 -kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLa-GcpPFwHRkQmlMLR~ImeGkyqF~speWadi  255 (411)
T KOG0599|consen  178 -KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLA-GCPPFWHRKQMLMLRMIMEGKYQFRSPEWADI  255 (411)
T ss_pred             -hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHc-CCCchhHHHHHHHHHHHHhcccccCCcchhhc
Confidence             4456799999999998863      358899999999999999999 999998877777788887777766544  678


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      +..+++|+.+||+.||.+|.|+++++.|.+.+.-..
T Consensus       256 s~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~  291 (411)
T KOG0599|consen  256 SATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQ  291 (411)
T ss_pred             cccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHH
Confidence            999999999999999999999999999987654433

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=2.7e-33  Score=248.98  Aligned_cols=170  Identities=18%  Similarity=0.251  Sum_probs=141.9

Q ss_pred             CcccccchhHHHHHhcCCC-----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      |.+||++.|+|.+.+....           ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++..
T Consensus       116 lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~N--ILl~~~~~vkL~DFGls~~~  193 (496)
T PTZ00283        116 LVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSAN--ILLCSNGLVKLGDFGFSKMY  193 (496)
T ss_pred             EEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH--EEEeCCCCEEEEecccCeec
Confidence            4679999999988664321           1245688899999999999999999999  99999999999999999874


Q ss_pred             CCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcH
Q psy2787          70 QNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        70 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      .... ........||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..++...+. .+...+.+..+++
T Consensus       194 ~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLlt-G~~Pf~~~~~~~~~~~~~-~~~~~~~~~~~~~  271 (496)
T PTZ00283        194 AATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLT-LKRPFDGENMEEVMHKTL-AGRYDPLPPSISP  271 (496)
T ss_pred             cccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHh-cCCCCCCCCCCCH
Confidence            4321 112334568899999999999889999999999999999999 999999888777777664 3344456678999


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      ++.+++.+||..+|++||++.+++.+
T Consensus       272 ~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        272 EMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHHhC
Confidence            99999999999999999999999876

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=5.8e-33  Score=233.98  Aligned_cols=177  Identities=25%  Similarity=0.529  Sum_probs=144.6

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.|++.+......        ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~N--ill~~~~~~kl~DfG~a~~~~~~~  163 (316)
T cd05108          86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARN--VLVKTPQHVKITDFGLAKLLGADE  163 (316)
T ss_pred             eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhh--eEecCCCcEEEccccccccccCCC
Confidence            578888888888765432        2345688899999999999999999999  999999999999999998754322


Q ss_pred             e-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 Y-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      . .......++..|+|||++.+..++.++||||||+++||++++|..||.+....++... ...+...+.+..++.++.+
T Consensus       164 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  242 (316)
T cd05108         164 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-LEKGERLPQPPICTIDVYM  242 (316)
T ss_pred             cceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HhCCCCCCCCCCCCHHHHH
Confidence            1 1222334466799999999888999999999999999999779999988776665444 3566666667788999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ++.+||..+|++||++.+++..+..+...
T Consensus       243 li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         243 IMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence            99999999999999999999998777543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=8.1e-33  Score=226.31  Aligned_cols=175  Identities=27%  Similarity=0.570  Sum_probs=143.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||.|  |+++.++.+||+|||+++......
T Consensus        72 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~n--ill~~~~~~kl~Dfg~~~~~~~~~  149 (257)
T cd05116          72 LVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARN--VLLVTQHYAKISDFGLSKALGADE  149 (257)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhh--EEEcCCCeEEECCCccccccCCCC
Confidence            357888888887765432       23456788899999999999999999999  999999999999999998754332


Q ss_pred             ee--ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          74 YV--MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        74 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..  ......++..|+|||.+....++.++|+||||+++|||+++|..||.+....++...+. .+..++.+..++.++.
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~  228 (257)
T cd05116         150 NYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIE-SGERMECPQRCPPEMY  228 (257)
T ss_pred             CeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-CCCCCCCCCCCCHHHH
Confidence            21  12223345689999999888889999999999999999976899998877777777664 5555667778999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +++.+||+.||++||++.+|.+.|.+.
T Consensus       229 ~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         229 DLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             HHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>KOG0694|consensus

Probab=100.00  E-value=8.3e-34  Score=246.99  Aligned_cols=168  Identities=20%  Similarity=0.265  Sum_probs=142.5

Q ss_pred             cccccchhHHHHHhc------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYT------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .|||...||+.....      .....+.-+++.||.|||++||||||||.+|  ||+|..|.+||+|||+++..-... .
T Consensus       447 vmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdN--iLLD~eGh~kiADFGlcKe~m~~g-~  523 (694)
T KOG0694|consen  447 VMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDN--LLLDTEGHVKIADFGLCKEGMGQG-D  523 (694)
T ss_pred             EEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhh--eEEcccCcEEecccccccccCCCC-C
Confidence            589999999433222      1123456677899999999999999999999  999999999999999999732211 2


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMR  155 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~  155 (251)
                      .+++.+||+.|||||++.+..|+.++|.|||||++|||+. |+.||.|.+..++...|.......  |..++.+..++++
T Consensus       524 ~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~-Gq~PF~gddEee~FdsI~~d~~~y--P~~ls~ea~~il~  600 (694)
T KOG0694|consen  524 RTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLV-GESPFPGDDEEEVFDSIVNDEVRY--PRFLSKEAIAIMR  600 (694)
T ss_pred             ccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHhcCCCCC--CCcccHHHHHHHH
Confidence            5678899999999999999999999999999999999999 999999999999999998776555  4579999999999


Q ss_pred             HHhccCCCCCCC-----HHHHHHHH
Q psy2787         156 QCWSKNPAERPK-----FSTLKDCL  175 (251)
Q Consensus       156 ~cl~~dP~~Rps-----~~~il~~l  175 (251)
                      +++..+|++|..     +.+|..|.
T Consensus       601 ~ll~k~p~kRLG~~e~d~~~i~~hp  625 (694)
T KOG0694|consen  601 RLLRKNPEKRLGSGERDAEDIKKHP  625 (694)
T ss_pred             HHhccCcccccCCCCCCchhhhhCC
Confidence            999999999975     46666653

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.2e-32  Score=226.65  Aligned_cols=175  Identities=25%  Similarity=0.531  Sum_probs=142.8

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.++|.+.+...        ...++.+++.||+|||+++|+||||||+|  |+++.++.+|++|||.+......
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~n--ili~~~~~~~l~dfg~~~~~~~~  160 (266)
T cd05064          83 IVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHK--VLVNSDLVCKISGFRRLQEDKSE  160 (266)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhh--EEEcCCCcEEECCCccccccccc
Confidence            568999988888765432        23456677899999999999999999999  99999999999999987764332


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........++..|+|||++.+..++.++|||||||++||+++.|..||.+.+..+....+ ..+...+.+..++..+.+
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  239 (266)
T cd05064         161 AIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV-EDGFRLPAPRNCPNLLHQ  239 (266)
T ss_pred             chhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-HCCCCCCCCCCCCHHHHH
Confidence            2222223345567999999998899999999999999999775599999988877777766 355566677889999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.+||+.+|++||++.++++.|.++
T Consensus       240 li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         240 LMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            99999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=1.8e-32  Score=227.02  Aligned_cols=177  Identities=25%  Similarity=0.545  Sum_probs=144.0

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ...+.|++.||+|||+++++||||||+|  |+++.++.+||+|||+++.....
T Consensus        85 ~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~n--ili~~~~~~kl~Dfg~~~~~~~~  162 (279)
T cd05111          85 LVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARN--ILLKSDSIVQIADFGVADLLYPD  162 (279)
T ss_pred             EEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcce--EEEcCCCcEEEcCCccceeccCC
Confidence            3578999999988775322        2356688899999999999999999999  99999999999999999864322


Q ss_pred             c-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 C-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      . ........++..|++||++.+..++.++||||||+++||++++|..||.+.........+ ..+...+.+..++.++.
T Consensus       163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  241 (279)
T cd05111         163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-EKGERLAQPQICTIDVY  241 (279)
T ss_pred             CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCCCCCCCCHHHH
Confidence            2 112233456678999999998889999999999999999997799999887765554444 45566666677888999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +++.+||..+|++|||+.++++.|..+..
T Consensus       242 ~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         242 MVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             HHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            99999999999999999999998877543

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=8.5e-33  Score=227.71  Aligned_cols=174  Identities=26%  Similarity=0.508  Sum_probs=140.7

Q ss_pred             cccccchhHHHHHhcC----C---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           2 SANFAELNAFQENYTE----P---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~----~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .+||+..++|.+.+..    .         ....+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.
T Consensus        84 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~kl~Dfg~~~~  161 (272)
T cd05075          84 ILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARN--CMLNENMNVCVADFGLSKK  161 (272)
T ss_pred             EEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhh--eEEcCCCCEEECCCCcccc
Confidence            4688888887765421    1         12345677899999999999999999999  9999999999999999987


Q ss_pred             cCCCcee-ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCc
Q psy2787          69 SQNDCYV-MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        69 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ....... ......++..|++||++.+..++.++||||||+++||+++.|..||.+....++...+. .+...+.+..++
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  240 (272)
T cd05075         162 IYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR-QGNRLKQPPDCL  240 (272)
T ss_pred             cCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCC
Confidence            5433221 22333456789999999988899999999999999999986789998887777776664 444555567788


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ..+.+++.+||+.+|++|||+.++++.|..+
T Consensus       241 ~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         241 DGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=2.6e-32  Score=225.89  Aligned_cols=175  Identities=27%  Similarity=0.577  Sum_probs=142.2

Q ss_pred             cccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.|++.+.......        ..+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        86 ~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~N--il~~~~~~~kL~dfG~~~~~~~~~  163 (279)
T cd05109          86 VTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARN--VLVKSPNHVKITDFGLARLLDIDE  163 (279)
T ss_pred             EEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce--EEEcCCCcEEECCCCceeeccccc
Confidence            5688888888887654322        246788899999999999999999999  999999999999999998754332


Q ss_pred             ee-ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YV-MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .. ......++..|+|||.+.+..++.++|||||||++||++++|..||.......+...+ ..+...+.+..++.++.+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  242 (279)
T cd05109         164 TEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL-EKGERLPQPPICTIDVYM  242 (279)
T ss_pred             ceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCCCCccCCHHHHH
Confidence            21 1222344667999999988889999999999999999998789999887766665554 455555666778999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ++.+||..||++||++.++++.+..+.
T Consensus       243 li~~~l~~dp~~Rp~~~~l~~~l~~~~  269 (279)
T cd05109         243 IMVKCWMIDSECRPRFRELVDEFSRMA  269 (279)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            999999999999999999998886554

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.7e-32  Score=228.47  Aligned_cols=178  Identities=28%  Similarity=0.555  Sum_probs=145.5

Q ss_pred             CcccccchhHHHHHhcCC-----------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEP-----------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+++...                       +.+.+.+++.||+|||+++|+||||||+|  |+++.++.
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N--il~~~~~~  161 (291)
T cd05094          84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRN--CLVGANLL  161 (291)
T ss_pred             EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcce--EEEccCCc
Confidence            357899989888876431                       12355678899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||++....... ........++..|+|||++.+..++.++||||||+++|||+++|..||...+..+....+. .
T Consensus       162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~  240 (291)
T cd05094         162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT-Q  240 (291)
T ss_pred             EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-C
Confidence            9999999998643322 2233445567789999999988899999999999999999987999998877766666553 4


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +.....+..++..+.+++.+||..+|++||++.++++.|..+...
T Consensus       241 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~  285 (291)
T cd05094         241 GRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA  285 (291)
T ss_pred             CCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence            444445567889999999999999999999999999999988653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG0193|consensus

Probab=100.00  E-value=1.5e-33  Score=242.28  Aligned_cols=176  Identities=23%  Similarity=0.372  Sum_probs=139.4

Q ss_pred             ccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC-Cc
Q psy2787           3 ANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN-DC   73 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~-~~   73 (251)
                      +-+|+..+|+.+++....        .+++|+++|+.|||.++|||||||..|  |++.+++.|||+|||++..-.. ..
T Consensus       466 TqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnN--IFl~~~~kVkIgDFGLatvk~~w~g  543 (678)
T KOG0193|consen  466 TQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNN--IFLHEDLKVKIGDFGLATVKTRWSG  543 (678)
T ss_pred             ehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccc--eEEccCCcEEEecccceeeeeeecc
Confidence            445667777776554433        357889999999999999999999999  9999999999999999875110 11


Q ss_pred             eeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC---CCCCCCCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG---ERLPRPEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~  147 (251)
                      ........+..-|||||++.   ..+|+..+||||||+++|||++ |..||......+++..+-+.-   .......+++
T Consensus       544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELlt-g~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~p  622 (678)
T KOG0193|consen  544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLT-GELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCP  622 (678)
T ss_pred             ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHh-CcCCcCCCChhheEEEecccccCccchhhhccCH
Confidence            11233445666799999987   3579999999999999999999 999999766667666654331   1123346799


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .++++|+..||..++++||.+.+|+..|+.+.+.
T Consensus       623 k~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~  656 (678)
T KOG0193|consen  623 KAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS  656 (678)
T ss_pred             HHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence            9999999999999999999999999999888775

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=2.3e-32  Score=232.45  Aligned_cols=156  Identities=31%  Similarity=0.574  Sum_probs=129.1

Q ss_pred             CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          23 LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        23 ~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                      +.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++...... ........++..|+|||++.+..++.++
T Consensus       179 ~~qi~~aL~~lH~~~ivHrDikp~N--ill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  256 (337)
T cd05054         179 SFQVARGMEFLASRKCIHRDLAARN--ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQS  256 (337)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCcce--EEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccc
Confidence            4678899999999999999999999  999999999999999998743322 2223344566789999999998999999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         102 DAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       102 Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      |||||||++|||++.|..||.+....+........+.+...+..+++++.+++.+||+.+|++||++.+++++|..+.+
T Consensus       257 Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         257 DVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             cHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999668999987654444434444555555667788999999999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG0196|consensus

Probab=100.00  E-value=8.8e-34  Score=249.39  Aligned_cols=177  Identities=27%  Similarity=0.544  Sum_probs=154.2

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+++|+|-.++...        +...++.|+.|+.||-+.+++||||-..|  ||++.+..+||+|||++|.+.++.
T Consensus       708 iTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARN--ILVNsnLvCKVsDFGLSRvledd~  785 (996)
T KOG0196|consen  708 ITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARN--ILVNSNLVCKVSDFGLSRVLEDDP  785 (996)
T ss_pred             EhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhh--eeeccceEEEeccccceeecccCC
Confidence            57888888877766543        33346667789999999999999999999  999999999999999999865544


Q ss_pred             --eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          74 --YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        74 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                        +..+....-+.+|.|||.+...+|+.+|||||||+++||.+++|+.||.+.++++....| .+++++|.|.+||..+.
T Consensus       786 ~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaI-e~gyRLPpPmDCP~aL~  864 (996)
T KOG0196|consen  786 EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI-EQGYRLPPPMDCPAALY  864 (996)
T ss_pred             CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHH-HhccCCCCCCCCcHHHH
Confidence              222223344679999999999999999999999999999999999999999999999998 58999999999999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .||..||++|-.+||.+.+|+..|.++-.+
T Consensus       865 qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  865 QLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             HHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999987644

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.98  E-value=1.8e-32  Score=227.18  Aligned_cols=153  Identities=27%  Similarity=0.640  Sum_probs=129.4

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCch
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQA  100 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~  100 (251)
                      ++.|++.||+|||++||+||||||+|  |++++++.+||+|||+++...... ........+++.|+|||++.+..++.+
T Consensus       129 ~~~ql~~aL~~lH~~gi~H~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  206 (283)
T cd05091         129 IVTQIAAGMEFLSSHHVVHKDLATRN--VLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSID  206 (283)
T ss_pred             HHHHHHHHHHHHHHcCccccccchhh--eEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcc
Confidence            45688899999999999999999999  999999999999999988743322 223334456778999999988889999


Q ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         101 SDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       101 ~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +||||+||++|||++.|..||.+....++...+. .+...+.+..++..+.+++.+||+.+|++||++.+|+..|+.
T Consensus       207 ~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         207 SDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIR-NRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            9999999999999986888998888777777764 444555667899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>KOG0194|consensus

Probab=99.98  E-value=1.9e-33  Score=242.07  Aligned_cols=179  Identities=30%  Similarity=0.562  Sum_probs=157.8

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+|+|..|+|.++++..-.        .+..+.+.||+|||++++|||||-..|  +|+..++.+||+|||+++.-.  
T Consensus       238 ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARN--cL~~~~~~vKISDFGLs~~~~--  313 (474)
T KOG0194|consen  238 LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARN--CLYSKKGVVKISDFGLSRAGS--  313 (474)
T ss_pred             EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHH--heecCCCeEEeCccccccCCc--
Confidence            36899999999998876432        345566799999999999999999999  999999999999999998643  


Q ss_pred             ceeecC-CCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CYVMTE-RKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~~-~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .+.... ....+.+|+|||.+....|+.++|||||||++||+++.|..||.+....++...|...+.+.+.+...|.++.
T Consensus       314 ~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~  393 (474)
T KOG0194|consen  314 QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELA  393 (474)
T ss_pred             ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHH
Confidence            222332 4467889999999999999999999999999999999889999999999999999889999999999999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      .++.+||..+|++||+|.++.+.+..+.....
T Consensus       394 ~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~  425 (474)
T KOG0194|consen  394 KVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE  425 (474)
T ss_pred             HHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence            99999999999999999999999988876543

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.98  E-value=4.5e-32  Score=222.22  Aligned_cols=174  Identities=24%  Similarity=0.541  Sum_probs=143.0

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ...+.+++.||+|||+.+++||||||+|  |+++.++.+||+|||++.....
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~n--ili~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05072          78 IITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAAN--VLVSESLMCKIADFGLARVIED  155 (261)
T ss_pred             EEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhh--EEecCCCcEEECCCccceecCC
Confidence            4578998888888664321         2245678899999999999999999999  9999999999999999987654


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||++.+..++.++||||||+++|+|+++|..||.+....+....+. ...+.+....++.++.
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  234 (261)
T cd05072         156 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQ-RGYRMPRMENCPDELY  234 (261)
T ss_pred             CceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHH
Confidence            433333334556789999999888899999999999999999976899998877766666653 4455555667899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||..+|++||+++++.+.|++
T Consensus       235 ~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         235 DIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHhc
Confidence            99999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.98  E-value=4.2e-32  Score=222.49  Aligned_cols=175  Identities=27%  Similarity=0.567  Sum_probs=142.9

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ..++.+++.||.|||+++|+||||||+|  |+++.++.+||+|||++.....
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~~l~dfg~~~~~~~  155 (261)
T cd05068          78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARN--VLVGENNICKVADFGLARVIKE  155 (261)
T ss_pred             eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcce--EEEcCCCCEEECCcceEEEccC
Confidence            4578888888888765432         2345667899999999999999999999  9999999999999999987654


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ...........+..|+|||++.+..++.++|+||||+++||+++.|..||.+.........+. .....+.+..++..+.
T Consensus       156 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  234 (261)
T cd05068         156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVD-QGYRMPCPPGCPKELY  234 (261)
T ss_pred             CcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCCHHHH
Confidence            322222223334579999999988899999999999999999987899999887777666663 4444555677889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +++.+||..+|++||++.++.+.|+.+
T Consensus       235 ~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         235 DIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             HHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.98  E-value=1.6e-33  Score=238.14  Aligned_cols=171  Identities=16%  Similarity=0.226  Sum_probs=140.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        72 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~N--Ill~~~~~~kl~DfG~a~~~~~~~  149 (323)
T cd05571          72 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLEN--LMLDKDGHIKITDFGLCKEGISDG  149 (323)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHH--EEECCCCCEEEeeCCCCcccccCC
Confidence            468999999988766432       22345688899999999999999999999  999999999999999987532211


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+.......+...  ....+..++.++.++
T Consensus       150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~l  225 (323)
T cd05571         150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELILME--EIRFPRTLSPEAKSL  225 (323)
T ss_pred             -CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence             12234568899999999998889999999999999999999 99999988777776666443  334556789999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      +.+||..||++||     ++.++++|-+-
T Consensus       226 i~~~L~~dP~~R~~~~~~~~~~ll~h~~f  254 (323)
T cd05571         226 LAGLLKKDPKQRLGGGPEDAKEIMEHRFF  254 (323)
T ss_pred             HHHHccCCHHHcCCCCCCCHHHHHcCCCc
Confidence            9999999999999     89999987553

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.98  E-value=2.3e-32  Score=229.07  Aligned_cols=174  Identities=28%  Similarity=0.501  Sum_probs=136.1

Q ss_pred             CcccccchhHHHHHhcCC--------------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc
Q psy2787           1 MSANFAELNAFQENYTEP--------------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS   54 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~   54 (251)
                      |.+||++.++|.+.+...                          ..+++.|++.||+|||+.||+||||||+|  |+++.
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~N--ill~~  173 (304)
T cd05096          96 MITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRN--CLVGE  173 (304)
T ss_pred             EEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhh--eEEcC
Confidence            467899888888765321                          12467788899999999999999999999  99999


Q ss_pred             CCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCChhHHHHH
Q psy2787          55 SSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT-FGAEPWVGLNGMQILQK  132 (251)
Q Consensus        55 ~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~-~g~~pf~~~~~~~~~~~  132 (251)
                      ++.+||+|||+++...... ........++..|+|||++.+..++.++||||||+++|||++ .+..||.+.+..+....
T Consensus       174 ~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~  253 (304)
T cd05096         174 NLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIEN  253 (304)
T ss_pred             CccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHH
Confidence            9999999999998643322 223344556788999999988889999999999999999986 25678887766555443


Q ss_pred             HHh---c---CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         133 IDR---E---GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       133 i~~---~---~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +..   .   ......++.++..+.+++.+||+.+|++|||+.+|.+.|+
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         254 AGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             HHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            321   1   1112334578899999999999999999999999988775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.98  E-value=1.9e-32  Score=242.92  Aligned_cols=170  Identities=18%  Similarity=0.271  Sum_probs=141.2

Q ss_pred             CcccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      |++||++.++|.+.+.+.           ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++..
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~N--Ill~~~~~~kL~DFgla~~~  219 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSAN--IFLMPTGIIKLGDFGFSKQY  219 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHh--EEECCCCcEEEEeCcCceec
Confidence            468999999998754321           12245688899999999999999999999  99999999999999999875


Q ss_pred             CCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcH
Q psy2787          70 QNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        70 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      ..... .......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..++...+.. +...+.+..++.
T Consensus       220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~t-g~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~s~  297 (478)
T PTZ00267        220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLT-LHRPFKGPSQREIMQQVLY-GKYDPFPCPVSS  297 (478)
T ss_pred             CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHh-CCCCCCCccCCH
Confidence            44321 12344568999999999999889999999999999999999 9999998887777777654 333455667889


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      ++.+++.+||..+|++||++.+++.+
T Consensus       298 ~~~~li~~~L~~dP~~Rps~~~~l~~  323 (478)
T PTZ00267        298 GMKALLDPLLSKNPALRPTTQQLLHT  323 (478)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHhC
Confidence            99999999999999999999999765

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.98  E-value=2.6e-32  Score=223.47  Aligned_cols=175  Identities=24%  Similarity=0.553  Sum_probs=142.8

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...        ..+++.+++.||+|||+++|+||||||+|  |+++.++.+||+|||++......
T Consensus        71 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n--il~~~~~~~kl~dfg~~~~~~~~  148 (257)
T cd05115          71 LVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARN--VLLVNQHYAKISDFGLSKALGAD  148 (257)
T ss_pred             EEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchhe--EEEcCCCcEEeccCCccccccCC
Confidence            357899888888766432        13456778899999999999999999999  99999999999999999864332


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .  ........++..|+|||++.+..++.++||||||+++|++++.|..||.+....+....+ ..+.+...+..+++++
T Consensus       149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  227 (257)
T cd05115         149 DSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFI-EQGKRLDCPAECPPEM  227 (257)
T ss_pred             ccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH-HCCCCCCCCCCCCHHH
Confidence            2  111222334567999999988889999999999999999995599999988777766665 4555666777889999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+++.+||..+|++||++.+|.+.|+.+
T Consensus       228 ~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         228 YALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            9999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.98  E-value=2.9e-32  Score=226.73  Aligned_cols=178  Identities=28%  Similarity=0.544  Sum_probs=144.3

Q ss_pred             CcccccchhHHHHHhcCC--------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEE
Q psy2787           1 MSANFAELNAFQENYTEP--------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSS   60 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl   60 (251)
                      +.+||++.++|.+++...                    ..+++.|++.||+|||++||+||||||+|  |+++.++.+||
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~N--ili~~~~~~kl  161 (288)
T cd05093          84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRN--CLVGENLLVKI  161 (288)
T ss_pred             EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcce--EEEccCCcEEe
Confidence            357898888888766421                    12356678899999999999999999999  99999999999


Q ss_pred             ccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC
Q psy2787          61 GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER  139 (251)
Q Consensus        61 ~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~  139 (251)
                      +|||+++...... ........++..|+|||++.+..++.++||||||+++|+|+++|..||.+....+....+. .+..
T Consensus       162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~-~~~~  240 (288)
T cd05093         162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT-QGRV  240 (288)
T ss_pred             ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCc
Confidence            9999998643322 2223334456789999999988899999999999999999986899998887777776664 3444


Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         140 LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       140 ~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ...+..++.++.+++.+||+.+|.+|||+.+++..|+.+...
T Consensus       241 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~  282 (288)
T cd05093         241 LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA  282 (288)
T ss_pred             CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence            445567889999999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.98  E-value=3.9e-32  Score=226.99  Aligned_cols=177  Identities=28%  Similarity=0.554  Sum_probs=142.1

Q ss_pred             CcccccchhHHHHHhcCC-----------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEP-----------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||.+.++|.+.+...                       ...++.|++.||+|||++||+||||||+|  |+++.++.
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~N--ill~~~~~  157 (297)
T cd05089          80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARN--VLVGENLA  157 (297)
T ss_pred             EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcce--EEECCCCe
Confidence            357888888888766431                       12345677899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC
Q psy2787          58 SSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG  137 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~  137 (251)
                      +||+|||++......  ........+..|+|||++.+..++.++|||||||++|||++.|..||.+....+....+. .+
T Consensus       158 ~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~-~~  234 (297)
T cd05089         158 SKIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLP-QG  234 (297)
T ss_pred             EEECCcCCCccccce--eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-cC
Confidence            999999998743221  111222335579999999888899999999999999999966999999888777776663 44


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ...+.+..++.++.+++.+||..+|.+||++.++++.|..+....
T Consensus       235 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~  279 (297)
T cd05089         235 YRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR  279 (297)
T ss_pred             CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            555566778999999999999999999999999999988776543

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.98  E-value=3.7e-32  Score=224.74  Aligned_cols=173  Identities=26%  Similarity=0.508  Sum_probs=139.5

Q ss_pred             CcccccchhHHHHHhcCCC-----------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccC
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDF   63 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DF   63 (251)
                      +.+||++.++|.+++....                 ...+.+++.||+|||+.+++||||||+|  |++++++.+||+||
T Consensus        86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~N--il~~~~~~~~l~df  163 (277)
T cd05062          86 VIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARN--CMVAEDFTVKIGDF  163 (277)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchhe--EEEcCCCCEEECCC
Confidence            3578998888887654311                 1235578899999999999999999999  99999999999999


Q ss_pred             CCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC
Q psy2787          64 GMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR  142 (251)
Q Consensus        64 Gla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~  142 (251)
                      |+++....... .......++..|+|||++.+..++.++||||||+++|||+++|..||.+....+....+.. ......
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~-~~~~~~  242 (277)
T cd05062         164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVME-GGLLDK  242 (277)
T ss_pred             CCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-CCcCCC
Confidence            99886433222 2222344577899999999888999999999999999999866899988877776666543 333455


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +..++..+.+++.+||..+|++|||+.++++.|+
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         243 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            6678899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.98  E-value=5.5e-33  Score=234.26  Aligned_cols=170  Identities=16%  Similarity=0.242  Sum_probs=140.0

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|...+....       ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~N--ill~~~~~~kL~Dfg~a~~~~~~~  150 (316)
T cd05592          73 FVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDN--VLLDKDGHIKIADFGMCKENMNGE  150 (316)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH--eEECCCCCEEEccCcCCeECCCCC
Confidence            4689999999987664321       2356788899999999999999999999  999999999999999998643222


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||..|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+..  ..+..+..++.++.++
T Consensus       151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~-G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~l  226 (316)
T cd05592         151 -GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLI-GQSPFHGEDEDELFDSILN--DRPHFPRWISKEAKDC  226 (316)
T ss_pred             -CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHH
Confidence             22344568899999999998889999999999999999999 9999999887777776643  3445566789999999


Q ss_pred             HHHHhccCCCCCCCHH-HHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFS-TLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~-~il~~l~  176 (251)
                      +.+||+.+|++||++. ++++|.+
T Consensus       227 l~~~l~~~P~~R~~~~~~l~~h~~  250 (316)
T cd05592         227 LSKLFERDPTKRLGVDGDIRQHPF  250 (316)
T ss_pred             HHHHccCCHHHcCCChHHHHcCcc
Confidence            9999999999999875 6666543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.98  E-value=3.3e-32  Score=225.10  Aligned_cols=173  Identities=28%  Similarity=0.581  Sum_probs=141.2

Q ss_pred             CcccccchhHHHHHhcCCC---------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceE
Q psy2787           1 MSANFAELNAFQENYTEPC---------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSS   59 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~k   59 (251)
                      |.+||++.++|.+++....                     ..++.+++.|++|||+++|+||||||+|  |+++.++.+|
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~n--ili~~~~~~k  162 (280)
T cd05049          85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRN--CLVGYDLVVK  162 (280)
T ss_pred             EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccce--EEEcCCCeEE
Confidence            4678998888888764321                     2236678899999999999999999999  9999999999


Q ss_pred             EccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC
Q psy2787          60 SGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE  138 (251)
Q Consensus        60 l~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~  138 (251)
                      |+|||+++...... ........++..|+|||++.+..++.++||||||+++|||+++|..||.+....+....+. .+.
T Consensus       163 l~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~-~~~  241 (280)
T cd05049         163 IGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT-QGR  241 (280)
T ss_pred             ECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCC
Confidence            99999997643222 1223344556789999999998999999999999999999977999998877777776664 444


Q ss_pred             CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         139 RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ....+..++..+.+++.+||..||++||++.++++.|.
T Consensus       242 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         242 LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            44455678999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=5.5e-33  Score=231.56  Aligned_cols=168  Identities=16%  Similarity=0.168  Sum_probs=141.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+++...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++..... 
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--Ili~~~~~~kl~Dfg~~~~~~~~-  154 (291)
T cd05612          78 MLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPEN--ILLDKEGHIKLTDFGFAKKLRDR-  154 (291)
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH--eEECCCCCEEEEecCcchhccCC-
Confidence            468999999888766432       22356788899999999999999999999  99999999999999999875432 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         .....|++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..++...+....  ...+..++..+.++
T Consensus       155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~l  228 (291)
T cd05612         155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLV-GYPPFFDDNPFGIYEKILAGK--LEFPRHLDLYAKDL  228 (291)
T ss_pred             ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCC--cCCCccCCHHHHHH
Confidence               223467889999999998889999999999999999999 999999888777777775443  34456678899999


Q ss_pred             HHHHhccCCCCCCC-----HHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPK-----FSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps-----~~~il~~l~~  177 (251)
                      +.+||..||.+|++     +.++++|.+-
T Consensus       229 i~~~l~~dp~~R~~~~~~~~~~~l~h~~~  257 (291)
T cd05612         229 IKKLLVVDRTRRLGNMKNGADDVKNHRWF  257 (291)
T ss_pred             HHHHcCCCHHHccCCccCCHHHHhcCccc
Confidence            99999999999995     9999988764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.98  E-value=4.4e-32  Score=223.38  Aligned_cols=174  Identities=26%  Similarity=0.531  Sum_probs=141.4

Q ss_pred             cccccchhHHHHHhcCC-------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           2 SANFAELNAFQENYTEP-------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .+||++.++|.......             ...++.|++.||+|||+++|+||||||+|  |++++++.+||+|||+++.
T Consensus        85 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~N--il~~~~~~~kl~dfg~~~~  162 (273)
T cd05035          85 ILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARN--CMLREDMTVCVADFGLSKK  162 (273)
T ss_pred             EEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhe--EEECCCCeEEECCccceee
Confidence            46788888887654221             11245688899999999999999999999  9999999999999999987


Q ss_pred             cCCCcee-ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCc
Q psy2787          69 SQNDCYV-MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        69 ~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ....... .......+..|+|||++.+..++.++|||||||++|||++.|..||.+....++...+. .+.....+..++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  241 (273)
T cd05035         163 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLR-HGNRLKQPEDCL  241 (273)
T ss_pred             ccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCcCCC
Confidence            5433221 22223456679999999888899999999999999999987889998887777776664 445556677899


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .++.+++.+||+.||++|||+.+++++|..+
T Consensus       242 ~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         242 DELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            9999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.98  E-value=1.1e-31  Score=224.99  Aligned_cols=178  Identities=27%  Similarity=0.553  Sum_probs=145.1

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+++....                       ...+.|++.||+|||++||+||||||+|  |+++.++.
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N--ili~~~~~  175 (304)
T cd05101          98 VIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN--VLVTENNV  175 (304)
T ss_pred             EEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce--EEEcCCCc
Confidence            3678998888888765321                       1124588999999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCcee-ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDCYV-MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+++........ ......++..|+|||++.+..++.++||||||+++|+++++|..||.+.+..++...+ ..
T Consensus       176 ~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~  254 (304)
T cd05101         176 MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KE  254 (304)
T ss_pred             EEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-Hc
Confidence            999999999875432221 2223345667999999988889999999999999999998688999888877777766 34


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +.+...+..++.++.+++.+||..+|++|||+.++++.|.++...
T Consensus       255 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~  299 (304)
T cd05101         255 GHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL  299 (304)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence            455556678899999999999999999999999999999877543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.98  E-value=8.2e-33  Score=226.81  Aligned_cols=172  Identities=27%  Similarity=0.551  Sum_probs=139.5

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC-
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ-   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~-   70 (251)
                      |.+||++.|+|.+++...         +...+.++++||.|||+++|+|+||+++|  |+++.++.+||+|||++.... 
T Consensus        78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~n--ill~~~~~~Kl~~f~~~~~~~~  155 (259)
T PF07714_consen   78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSN--ILLDSNGQVKLSDFGLSRPISE  155 (259)
T ss_dssp             EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGG--EEEETTTEEEEESTTTGEETTT
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccc
Confidence            457999988888866654         12235677799999999999999999999  999999999999999998753 


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ...............|+|||++.+..++.++||||||+++||+++.|..||.+.+..++...+ ..+.+.+.+..++..+
T Consensus       156 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  234 (259)
T PF07714_consen  156 KSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-KQGQRLPIPDNCPKDI  234 (259)
T ss_dssp             SSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-HTTEETTSBTTSBHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccceeccchhHHH
Confidence            233334455667778999999998889999999999999999999678999998888888877 5666777778899999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      .+++.+||+.+|++|||+.++++.|
T Consensus       235 ~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  235 YSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHhcC
Confidence            9999999999999999999999875

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.98  E-value=2.6e-32  Score=230.15  Aligned_cols=170  Identities=14%  Similarity=0.207  Sum_probs=138.3

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||+..++|...+....       ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05620          73 FVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDN--VMLDRDGHIKIADFGMCKENVFGD  150 (316)
T ss_pred             EEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH--eEECCCCCEEeCccCCCeecccCC
Confidence            4689999999987665321       2245688899999999999999999999  999999999999999987532111


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||..|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+...  .+..+..++.++.++
T Consensus       151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~-g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l  226 (316)
T cd05620         151 -NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLI-GQSPFHGDDEDELFESIRVD--TPHYPRWITKESKDI  226 (316)
T ss_pred             -CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHHHH
Confidence             12234567889999999999899999999999999999999 99999988877777766433  334455688999999


Q ss_pred             HHHHhccCCCCCCCH-HHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKF-STLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~-~~il~~l~  176 (251)
                      +.+||..||++|+++ +++++|.+
T Consensus       227 i~~~l~~dP~~R~~~~~~~~~h~~  250 (316)
T cd05620         227 LEKLFERDPTRRLGVVGNIRGHPF  250 (316)
T ss_pred             HHHHccCCHHHcCCChHHHHcCCC
Confidence            999999999999998 46766644

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>KOG0589|consensus

Probab=99.98  E-value=2.6e-33  Score=237.17  Aligned_cols=169  Identities=19%  Similarity=0.246  Sum_probs=150.3

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.++||+.|++.+.+....         .+.+.|++.|+.|||++.|+|||||+.|  |++..++.+||+|||+|+....
T Consensus        81 Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~N--ifltk~~~VkLgDfGlaK~l~~  158 (426)
T KOG0589|consen   81 IVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCAN--IFLTKDKKVKLGDFGLAKILNP  158 (426)
T ss_pred             EEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhh--hhccccCceeecchhhhhhcCC
Confidence            3689999999999776544         2345667899999999999999999999  9999999999999999998766


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      +. ....+..||+.||+||.+.+.+|+.|+||||+||++|||++ -+.+|.+.+...+..++... ...+.|...+.+++
T Consensus       159 ~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~-lk~aF~a~~m~~Li~ki~~~-~~~Plp~~ys~el~  235 (426)
T KOG0589|consen  159 ED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCT-LKPAFKASNMSELILKINRG-LYSPLPSMYSSELR  235 (426)
T ss_pred             ch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHh-cccccCccchHHHHHHHhhc-cCCCCCccccHHHH
Confidence            53 24567889999999999999999999999999999999999 99999999988888888654 45677888999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      .++..|+..+|+.||++.+++.+
T Consensus       236 ~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  236 SLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHHhhcCCccCCCHHHHhhC
Confidence            99999999999999999999987

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.97  E-value=5.4e-32  Score=221.22  Aligned_cols=170  Identities=24%  Similarity=0.565  Sum_probs=140.2

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ..++.+++.||+|||++||+||||||+|  |+++.++.+||+|||+++....
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n--il~~~~~~~kl~dfg~~~~~~~  154 (256)
T cd05082          77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARN--VLVSEDNVAKVSDFGLTKEASS  154 (256)
T ss_pred             EEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchhe--EEEcCCCcEEecCCccceeccc
Confidence            3678998888888665322         2455678899999999999999999999  9999999999999999886433


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .    ......+..|+|||++.+..++.++|||||||++|+|++.|..||......+....+. .+.....+..++..+.
T Consensus       155 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  229 (256)
T cd05082         155 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPVVY  229 (256)
T ss_pred             c----CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCCHHHH
Confidence            2    1223345579999999888899999999999999999976899998877766666653 4445555678899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||..+|++|||+.++++.|..
T Consensus       230 ~li~~~l~~~p~~Rpt~~~l~~~l~~  255 (256)
T cd05082         230 DVMKQCWHLDAATRPSFLQLREQLEH  255 (256)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHhc
Confidence            99999999999999999999998865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=5.4e-32  Score=221.34  Aligned_cols=176  Identities=28%  Similarity=0.615  Sum_probs=142.9

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+....       ...+.|++.||+|||..+|+|+||||+|  |+++.++.+||+|||+++......
T Consensus        72 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~n--ili~~~~~~kl~df~~~~~~~~~~  149 (257)
T cd05060          72 LVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARN--VLLVNRHQAKISDFGMSRALGAGS  149 (257)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccce--EEEcCCCcEEeccccccceeecCC
Confidence            3578888888887665322       3456777899999999999999999999  999999999999999998753322


Q ss_pred             ee--ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          74 YV--MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        74 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..  ......++..|+|||.+.+..++.++||||||+++|+++++|..||...+..++...+ ......+.+..++..+.
T Consensus       150 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  228 (257)
T cd05060         150 DYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML-ESGERLPRPEECPQEIY  228 (257)
T ss_pred             cccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-HcCCcCCCCCCCCHHHH
Confidence            11  1122233567999999998889999999999999999997689999887776666665 34555566778899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +++.+||..+|++||++.++++.|..+.
T Consensus       229 ~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         229 SIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             HHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            9999999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=1.2e-31  Score=219.17  Aligned_cols=171  Identities=27%  Similarity=0.545  Sum_probs=140.4

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.+....        ...+.+++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~n--i~i~~~~~~kl~d~g~~~~~~~~~  154 (256)
T cd05114          77 VTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARN--CLVSSTGVVKVSDFGMTRYVLDDE  154 (256)
T ss_pred             EEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcce--EEEcCCCeEEECCCCCccccCCCc
Confidence            578999999988765321        2345677899999999999999999999  999999999999999998754433


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      ........++..|+|||++.+..++.++|+||||+++||+++.|..||...+..+....+. .+.+...+...+..+.++
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~l  233 (256)
T cd05114         155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMIS-RGFRLYRPKLASMTVYEV  233 (256)
T ss_pred             eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCCCCCCCCCCHHHHHH
Confidence            3333334456679999999988899999999999999999986789998888777777764 344455566678899999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +.+||+.+|++||++.++++.|
T Consensus       234 i~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         234 MYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHccCCcccCcCHHHHHHhh
Confidence            9999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.97  E-value=5e-32  Score=221.50  Aligned_cols=172  Identities=26%  Similarity=0.556  Sum_probs=140.3

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.....        ....+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++...+.
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~n--i~i~~~~~~kl~dfg~~~~~~~~  153 (256)
T cd05059          76 IVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARN--CLVGEDNVVKVSDFGLARYVLDD  153 (256)
T ss_pred             EEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhh--EEECCCCcEEECCcccceecccc
Confidence            357888888888765432        12356778899999999999999999999  99999999999999999875443


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........++..|+|||.+.+..++.++|+||||+++|++++.|..||.+.+..+....+. ...+...+..++.++.+
T Consensus       154 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  232 (256)
T cd05059         154 QYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS-AGYRLYRPKLAPTEVYT  232 (256)
T ss_pred             cccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHH
Confidence            32222233345679999999988899999999999999999986799998877777666653 45555666778999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.+||..+|++|||+.++++.|
T Consensus       233 li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         233 IMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHhcCChhhCcCHHHHHHHh
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>KOG0660|consensus

Probab=99.97  E-value=2.5e-32  Score=222.36  Aligned_cols=155  Identities=19%  Similarity=0.197  Sum_probs=125.1

Q ss_pred             CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccC-CCC
Q psy2787          19 CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLK-HNQ   96 (251)
Q Consensus        19 ~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~-~~~   96 (251)
                      ++-++.|+++||.|+|+.+|+||||||+|  ++++.+-.+||||||+|+..... .....+.-..|.+|.|||++. ...
T Consensus       127 ~q~f~YQiLrgLKyiHSAnViHRDLKPsN--ll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~  204 (359)
T KOG0660|consen  127 AQYFLYQILRGLKYIHSANVIHRDLKPSN--LLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSE  204 (359)
T ss_pred             HHHHHHHHHHhcchhhcccccccccchhh--eeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhcccc
Confidence            45689999999999999999999999999  99999999999999999986432 111123345688899999876 457


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh------------------------cCCCCCCC-----CCCc
Q psy2787          97 FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR------------------------EGERLPRP-----EACP  147 (251)
Q Consensus        97 ~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~------------------------~~~~~~~~-----~~~~  147 (251)
                      |+.+.||||.|||+.||++ |++-|+|.+..+.+..+..                        -...++.+     ++++
T Consensus       205 Yt~aiDiWSvGCI~AEmL~-gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~  283 (359)
T KOG0660|consen  205 YTKAIDIWSVGCILAEMLT-GKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNAN  283 (359)
T ss_pred             ccchhhhhhhhHHHHHHHc-CCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCC
Confidence            9999999999999999999 9999988766554444432                        11111111     5688


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+.+|+.+||..||.+|+|+++++.|..
T Consensus       284 p~AidLlekmL~fdP~kRita~eAL~hPY  312 (359)
T KOG0660|consen  284 PLAIDLLEKMLVFDPKKRITAEEALAHPY  312 (359)
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcChh
Confidence            89999999999999999999999999864

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.97  E-value=1.8e-31  Score=218.70  Aligned_cols=174  Identities=25%  Similarity=0.502  Sum_probs=142.4

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||+..++|.+.+....         ...+.+++.||+|||+.+|+|+||||+|  |++++++.+||+|||++.....
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~N--ill~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05069          77 IVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAAN--ILVGDNLVCKIADFGLARLIED  154 (260)
T ss_pred             EEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcce--EEEcCCCeEEECCCccceEccC
Confidence            3578998888888765422         2345677899999999999999999999  9999999999999999987544


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||+..+..++.++||||||+++|++++.|..||.+....+....+. .....+.+...+..+.
T Consensus       155 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  233 (260)
T cd05069         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE-RGYRMPCPQGCPESLH  233 (260)
T ss_pred             CcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCcccCHHHH
Confidence            332233334456779999999888899999999999999999986889998877766666653 4445555677899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||..+|++||+++++++.|+.
T Consensus       234 ~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         234 ELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHhc
Confidence            99999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-32  Score=231.72  Aligned_cols=171  Identities=19%  Similarity=0.231  Sum_probs=140.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        70 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~N--ili~~~~~~kl~Dfg~~~~~~~~~  147 (312)
T cd05585          70 LVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPEN--ILLDYQGHIALCDFGLCKLNMKDD  147 (312)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHH--eEECCCCcEEEEECcccccCccCC
Confidence            468999999998876432       12346688899999999999999999999  999999999999999998632221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||..|+|||++.+..++.++||||+||++|+|++ |..||.+....+....+...  ....+..++.++.++
T Consensus       148 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~t-g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l  223 (312)
T cd05585         148 -DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLT-GLPPFYDENVNEMYRKILQE--PLRFPDGFDRDAKDL  223 (312)
T ss_pred             -CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHh-CCCCcCCCCHHHHHHHHHcC--CCCCCCcCCHHHHHH
Confidence             12334568899999999999889999999999999999999 99999988877777776543  344556789999999


Q ss_pred             HHHHhccCCCCCCC---HHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPK---FSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps---~~~il~~l~~  177 (251)
                      +.+||..||++||+   +.+++.|.+-
T Consensus       224 i~~~L~~dp~~R~~~~~~~e~l~hp~~  250 (312)
T cd05585         224 LIGLLSRDPTRRLGYNGAQEIKNHPFF  250 (312)
T ss_pred             HHHHcCCCHHHcCCCCCHHHHHcCCCc
Confidence            99999999999975   6777777543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0597|consensus

Probab=99.97  E-value=1.9e-32  Score=233.98  Aligned_cols=167  Identities=16%  Similarity=0.232  Sum_probs=145.2

Q ss_pred             cccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+|||.. +|.+.+.+..       ..+..+++.||.|||+++|+|||+||.|  ||++..+.+|+||||+|+..... .
T Consensus        79 Vte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqn--iLl~~~~~~KlcdFg~Ar~m~~~-t  154 (808)
T KOG0597|consen   79 VTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQN--ILLEKGGTLKLCDFGLARAMSTN-T  154 (808)
T ss_pred             Eehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcce--eeecCCCceeechhhhhhhcccC-c
Confidence            5788876 8888776544       3445566799999999999999999999  99999999999999999986654 3


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALM  154 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li  154 (251)
                      .......||+.|||||++.+..|+..+|+||+|||+||+++ |++||......++...|..+...+  |...+..+.+++
T Consensus       155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~-G~PPF~a~si~~Lv~~I~~d~v~~--p~~~S~~f~nfl  231 (808)
T KOG0597|consen  155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYV-GQPPFYARSITQLVKSILKDPVKP--PSTASSSFVNFL  231 (808)
T ss_pred             eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhc-CCCCchHHHHHHHHHHHhcCCCCC--cccccHHHHHHH
Confidence            45567889999999999999999999999999999999999 999999888888888886654444  447889999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHH
Q psy2787         155 RQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       155 ~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +..+.+||.+|.++.+++.|-
T Consensus       232 ~gLL~kdP~~RltW~~Ll~Hp  252 (808)
T KOG0597|consen  232 QGLLIKDPAQRLTWTDLLGHP  252 (808)
T ss_pred             HHHhhcChhhcccHHHHhcCh
Confidence            999999999999999999874

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.97  E-value=1.9e-31  Score=218.97  Aligned_cols=176  Identities=24%  Similarity=0.476  Sum_probs=143.7

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+++....         ...+.+++.||+|||+++|+||||||+|  |+++.++.+||+|||+++....
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~N--ill~~~~~~~L~dfg~~~~~~~  154 (262)
T cd05071          77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN--ILVGENLVCKVADFGLARLIED  154 (262)
T ss_pred             EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCccc--EEEcCCCcEEeccCCceeeccc
Confidence            3578999999988776422         2345677899999999999999999999  9999999999999999987544


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||+..+..++.++|+||||+++|++++.|..||.+....+....+. .+...+.+..++..+.
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  233 (262)
T cd05071         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLH  233 (262)
T ss_pred             cccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHh-cCCCCCCccccCHHHH
Confidence            332223344566789999999888899999999999999999986788998877766666653 3444455567889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +++.+||+.+|++||++.++++.|+...
T Consensus       234 ~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         234 DLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             HHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            9999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.97  E-value=6.6e-32  Score=223.94  Aligned_cols=174  Identities=26%  Similarity=0.549  Sum_probs=141.1

Q ss_pred             CcccccchhHHHHHhcCCC------------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC
Q psy2787           1 MSANFAELNAFQENYTEPC------------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS   56 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~------------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~   56 (251)
                      +.+||++.++|.+++....                        ..++.+++.||+|||+++|+||||||+|  |+++.++
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~n--ili~~~~  161 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARN--ILIGEQL  161 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccce--EEEcCCC
Confidence            4578888888887653111                        1245678899999999999999999999  9999999


Q ss_pred             ceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy2787          57 SSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR  135 (251)
Q Consensus        57 ~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~  135 (251)
                      .+||+|||+++...... ........++..|+|||++.+..++.++|+||||+++|||+++|..||.+.....+...+. 
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~-  240 (283)
T cd05090         162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVR-  240 (283)
T ss_pred             cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-
Confidence            99999999998743322 2223344556779999999888899999999999999999987889998877666666653 


Q ss_pred             cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         136 EGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       136 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ....++.+..++.++.+++.+||+.+|++||++.+++++|..
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         241 KRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            444556667889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.97  E-value=1.3e-32  Score=232.43  Aligned_cols=170  Identities=15%  Similarity=0.194  Sum_probs=140.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|...+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~N--Ili~~~~~~kL~DfG~~~~~~~~~  150 (320)
T cd05590          73 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDN--VLLDHEGHCKLADFGMCKEGIFNG  150 (320)
T ss_pred             EEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHH--eEECCCCcEEEeeCCCCeecCcCC
Confidence            468999999998765432       22356788899999999999999999999  999999999999999987632221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..++...+...  ....+..++.++.++
T Consensus       151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~l  226 (320)
T cd05590         151 -KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLC-GHAPFEAENEDDLFEAILND--EVVYPTWLSQDAVDI  226 (320)
T ss_pred             -CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhh-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHH
Confidence             12234568899999999998889999999999999999999 99999998888877777543  334456789999999


Q ss_pred             HHHHhccCCCCCCCH------HHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKF------STLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~------~~il~~l~  176 (251)
                      +.+||+.||++|+++      ++++.|.+
T Consensus       227 i~~~L~~dP~~R~~~~~~~~~~~~~~h~~  255 (320)
T cd05590         227 LKAFMTKNPTMRLGSLTLGGEEAILRHPF  255 (320)
T ss_pred             HHHHcccCHHHCCCCCCCCCHHHHHcCCC
Confidence            999999999999998      77777654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.97  E-value=7.5e-32  Score=226.30  Aligned_cols=179  Identities=26%  Similarity=0.546  Sum_probs=144.4

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+++....                       ..++.|++.||+|||++||+||||||+|  |+++.++.
T Consensus       101 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N--ill~~~~~  178 (307)
T cd05098         101 VIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN--VLVTEDNV  178 (307)
T ss_pred             EEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHh--eEEcCCCc
Confidence            4678999888888765321                       1236678899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||+++|..||.+.+..++...+ ..
T Consensus       179 ~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~-~~  257 (307)
T cd05098         179 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KE  257 (307)
T ss_pred             EEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHH-Hc
Confidence            99999999876433211 11222234567999999988889999999999999999998688999887766666655 44


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      +.....+..++.++.+++.+||..+|++|||+.++++.|..+....
T Consensus       258 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~  303 (307)
T cd05098         258 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT  303 (307)
T ss_pred             CCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence            5555667788999999999999999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0663|consensus

Probab=99.97  E-value=1.4e-32  Score=221.65  Aligned_cols=176  Identities=18%  Similarity=0.204  Sum_probs=142.1

Q ss_pred             Cccccc--chhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFA--ELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~--~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |+|||+  ++.++++.+.++     .+.++.|+++|++|||.+.|+|||||++|  +|+...|.+||+|||+||.++.+.
T Consensus       154 ~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SN--LLm~~~G~lKiaDFGLAR~ygsp~  231 (419)
T KOG0663|consen  154 IVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSN--LLLSHKGILKIADFGLAREYGSPL  231 (419)
T ss_pred             eeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhh--eeeccCCcEEecccchhhhhcCCc
Confidence            577886  477777777643     34467788899999999999999999999  999999999999999999987763


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL------------  140 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~------------  140 (251)
                       ...+....|.+|.|||.+.+. .|+.+.|+||+|||+.|+++ +++-|+|.+..+.+.+|.+--..+            
T Consensus       232 -k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~-~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp  309 (419)
T KOG0663|consen  232 -KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLT-QKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELP  309 (419)
T ss_pred             -ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHh-cCCCCCCCchHHHHHHHHHHhCCCccccCCCccccc
Confidence             234556788999999999875 48999999999999999999 999999998877777664411000            


Q ss_pred             --------CCC----------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         141 --------PRP----------EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       141 --------~~~----------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                              ..+          ...+....+|++.++..||.+|.|+.+.++|=+....
T Consensus       310 ~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  310 AVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             hhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence                    000          1145788899999999999999999999998765543

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.97  E-value=2.6e-32  Score=226.86  Aligned_cols=172  Identities=15%  Similarity=0.175  Sum_probs=134.8

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.......         ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++.....
T Consensus        77 lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~N--ill~~~~~~kl~Dfg~~~~~~~  154 (285)
T cd05631          77 LVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPEN--ILLDDRGHIRISDLGLAVQIPE  154 (285)
T ss_pred             EEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHH--EEECCCCCEEEeeCCCcEEcCC
Confidence            357899999887654321         12345678899999999999999999999  9999999999999999987543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh--cCCCCCCCCCCcHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR--EGERLPRPEACPVE  149 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~  149 (251)
                      ..  ......|+..|+|||++.+..++.++||||+||++|+|++ |..||.+.........+..  .......+..++.+
T Consensus       155 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  231 (285)
T cd05631         155 GE--TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQ-GQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSED  231 (285)
T ss_pred             CC--eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHh-CCCCCCCCCcchhHHHHHHHhhcccccCCccCCHH
Confidence            22  1234568899999999999899999999999999999999 9999987654322221111  12233445678899


Q ss_pred             HHHHHHHHhccCCCCCCC-----HHHHHHHHHh
Q psy2787         150 VYALMRQCWSKNPAERPK-----FSTLKDCLYR  177 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps-----~~~il~~l~~  177 (251)
                      +.+++.+||+.||++||+     ++++++|.+-
T Consensus       232 ~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~  264 (285)
T cd05631         232 AKSICRMLLTKNPKERLGCRGNGAAGVKQHPIF  264 (285)
T ss_pred             HHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhh
Confidence            999999999999999997     8899887653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=5.3e-32  Score=223.10  Aligned_cols=174  Identities=28%  Similarity=0.563  Sum_probs=139.3

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+++....                       ..++.+++.|++|||+++|+||||||+|  |+++.++.
T Consensus        73 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~n--ili~~~~~  150 (270)
T cd05047          73 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN--ILVGENYV  150 (270)
T ss_pred             EEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccce--EEEcCCCe
Confidence            4678988888887654321                       2345677899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC
Q psy2787          58 SSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG  137 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~  137 (251)
                      +||+|||+++.....  ........+..|+|||++.+..++.++||||||+++|||++.|..||.+.+..+....+. .+
T Consensus       151 ~kl~dfgl~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~-~~  227 (270)
T cd05047         151 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QG  227 (270)
T ss_pred             EEECCCCCccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHh-CC
Confidence            999999998642211  111223345679999999888899999999999999999965999998877766666653 44


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      .....+..++.++.+++.+||..+|.+|||+.+++..|..+.
T Consensus       228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         228 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             CCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            455556678899999999999999999999999999997653

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.97  E-value=7.4e-32  Score=224.46  Aligned_cols=157  Identities=27%  Similarity=0.616  Sum_probs=130.9

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~   99 (251)
                      .++.+++.||+|||+++|+||||||+|  |++++++.+||+|||+++..... .........++..|+|||++.+..++.
T Consensus       131 ~i~~~i~~~l~~LH~~~ivH~dikp~n--ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~  208 (290)
T cd05045         131 SFAWQISRGMQYLAEMKLVHRDLAARN--VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTT  208 (290)
T ss_pred             HHHHHHHHHHHHHHHCCeehhhhhhhe--EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcch
Confidence            345678899999999999999999999  99999999999999999864322 222223345567899999998888999


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ++||||||+++|||+++|..||.+....++...+ ......+.+..++.++.+++.+||+.+|++||++.++++.|+.+.
T Consensus       209 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         209 QSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLL-KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             HhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence            9999999999999998789999888777766655 344555666788999999999999999999999999999998765


Q ss_pred             H
Q psy2787         180 P  180 (251)
Q Consensus       180 ~  180 (251)
                      .
T Consensus       288 ~  288 (290)
T cd05045         288 V  288 (290)
T ss_pred             h
Confidence            3

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.97  E-value=2.1e-31  Score=218.30  Aligned_cols=175  Identities=25%  Similarity=0.496  Sum_probs=139.6

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+..++|.+.+....        ..++.++++||+|||+.+|+||||||+|  |+++.++.+||+|||+++......
T Consensus        75 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~n--ili~~~~~~kl~dfg~~~~~~~~~  152 (262)
T cd05058          75 VLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARN--CMLDESFTVKVADFGLARDIYDKE  152 (262)
T ss_pred             EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcce--EEEcCCCcEEECCccccccccCCc
Confidence            578888888887764321        1234588899999999999999999999  999999999999999998643322


Q ss_pred             ee---ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          74 YV---MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        74 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ..   ......++..|+|||++.+..++.++||||||+++|||+++|.+||...+..+....+. .+..+..+..++..+
T Consensus       153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  231 (262)
T cd05058         153 YYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLL-QGRRLLQPEYCPDPL  231 (262)
T ss_pred             ceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh-cCCCCCCCCcCCHHH
Confidence            11   11233456679999999888899999999999999999995567787777666666553 444555566788999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      .+++.+||..+|++||++.++++.|+.+.
T Consensus       232 ~~li~~cl~~~p~~Rp~~~~il~~l~~~~  260 (262)
T cd05058         232 YEVMLSCWHPKPEMRPTFSELVSRIEQIF  260 (262)
T ss_pred             HHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence            99999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.97  E-value=5.7e-33  Score=235.42  Aligned_cols=169  Identities=15%  Similarity=0.190  Sum_probs=141.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        95 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~N--Ill~~~~~~kl~Dfg~~~~~~~~~  172 (329)
T PTZ00263         95 FLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPEN--LLLDNKGHVKVTDFGFAKKVPDRT  172 (329)
T ss_pred             EEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH--EEECCCCCEEEeeccCceEcCCCc
Confidence            367999999998866532       12345678899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                          ....|++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...  ....+..++..+.++
T Consensus       173 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~l  245 (329)
T PTZ00263        173 ----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIA-GYPPFFDDTPFRIYEKILAG--RLKFPNWFDGRARDL  245 (329)
T ss_pred             ----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHc-CCCCCCCCCHHHHHHHHhcC--CcCCCCCCCHHHHHH
Confidence                23467889999999999889999999999999999999 99999988877777777543  345566788999999


Q ss_pred             HHHHhccCCCCCCC-----HHHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERPK-----FSTLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rps-----~~~il~~l~~~  178 (251)
                      +.+||..||.+|++     +.+++.|.+.-
T Consensus       246 i~~~L~~dP~~R~~~~~~~~~~ll~hp~f~  275 (329)
T PTZ00263        246 VKGLLQTDHTKRLGTLKGGVADVKNHPYFH  275 (329)
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhcCCccC
Confidence            99999999999986     78888886543

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.97  E-value=5e-32  Score=234.91  Aligned_cols=156  Identities=28%  Similarity=0.585  Sum_probs=128.5

Q ss_pred             CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          23 LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        23 ~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                      +.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+++...... ........++..|+|||++.+..++.++
T Consensus       243 ~~qi~~aL~~LH~~~ivH~dikp~N--ill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  320 (400)
T cd05105         243 TYQVARGMEFLASKNCVHRDLAARN--VLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLS  320 (400)
T ss_pred             HHHHHHHHHHHHhCCeeCCCCChHh--EEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchh
Confidence            4478899999999999999999999  999999999999999998743322 2223334566789999999888899999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         102 DAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       102 Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      |||||||++|||++.|..||.+.............+.+++.+..++.++.+++.+||..+|++|||+.++.+.|..+.+
T Consensus       321 DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         321 DVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             hHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            9999999999999768999987654433333334555666677899999999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.97  E-value=4.9e-32  Score=225.72  Aligned_cols=175  Identities=27%  Similarity=0.555  Sum_probs=143.0

Q ss_pred             cccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCce
Q psy2787           2 SANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSS   58 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~   58 (251)
                      .+||+..++|..++....                       ..++.|++.||+|||+++|+||||||+|  |+++.++.+
T Consensus        94 i~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N--il~~~~~~~  171 (293)
T cd05053          94 VVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARN--VLVTEDHVM  171 (293)
T ss_pred             EEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceee--EEEcCCCeE
Confidence            578888888887664311                       1246688899999999999999999999  999999999


Q ss_pred             EEccCCCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC
Q psy2787          59 SSGDFGMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG  137 (251)
Q Consensus        59 kl~DFGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~  137 (251)
                      ||+|||+++....... .......++..|+|||++.+..++.++|||||||++||+++.|..||.+....+....+ ..+
T Consensus       172 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~-~~~  250 (293)
T cd05053         172 KIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL-KEG  250 (293)
T ss_pred             EeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHH-HcC
Confidence            9999999987544322 22233345667999999988889999999999999999997799999988777766665 345


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      .....+..++..+.+++.+||..+|++|||+.++++.|..+.
T Consensus       251 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         251 YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            555666778899999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>KOG0600|consensus

Probab=99.97  E-value=1.1e-32  Score=232.61  Aligned_cols=157  Identities=20%  Similarity=0.257  Sum_probs=133.4

Q ss_pred             CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-
Q psy2787          17 EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-   95 (251)
Q Consensus        17 ~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-   95 (251)
                      ...+.++.|++.||+|||++||+|||||.+|  ||++.+|.+||+|||||+++........+....|.+|.|||.+.+. 
T Consensus       218 ~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SN--iLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t  295 (560)
T KOG0600|consen  218 PQIKCYMKQLLEGLEYCHSRGVLHRDIKGSN--ILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGAT  295 (560)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeeeccccccc--eEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCc
Confidence            3456688999999999999999999999999  9999999999999999999877766667778889999999999875 


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC----------CC--------C---------CCCCcH
Q psy2787          96 QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER----------LP--------R---------PEACPV  148 (251)
Q Consensus        96 ~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~----------~~--------~---------~~~~~~  148 (251)
                      .|+.+.|+||.|||+.||++ |++.|+|.+..+.++.|..-...          ++        .         -..++.
T Consensus       296 ~Yg~aVDlWS~GCIl~El~~-gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~  374 (560)
T KOG0600|consen  296 SYGTAVDLWSVGCILAELFL-GKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPA  374 (560)
T ss_pred             ccccceeehhhhHHHHHHHc-CCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCH
Confidence            69999999999999999999 99999999887777766431100          01        0         034677


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ...+|+..+|..||++|.|+.+++++=+
T Consensus       375 ~~l~Ll~~lL~ldP~kR~tA~~aL~sey  402 (560)
T KOG0600|consen  375 SALDLLEKLLSLDPDKRGTASSALQSEY  402 (560)
T ss_pred             HHHHHHHHHhccCccccccHHHHhcCcc
Confidence            8899999999999999999999987644

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.97  E-value=1e-31  Score=220.01  Aligned_cols=173  Identities=29%  Similarity=0.621  Sum_probs=144.4

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+++....         .+.+.+++.||+|||+++|+|+||||+|  |+++.++.+||+|||++.....
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~n--ilv~~~~~~kl~d~g~~~~~~~  156 (261)
T cd05148          79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARN--ILVGEDLVCKVADFGLARLIKE  156 (261)
T ss_pred             EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcce--EEEcCCceEEEccccchhhcCC
Confidence            3578999999988775432         2345677899999999999999999999  9999999999999999987544


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .... .....++..|++||++.+..++.++||||||+++|+|++.|..||.+.+..+....+. .+.+.+.+..++..+.
T Consensus       157 ~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  234 (261)
T cd05148         157 DVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-AGYRMPCPAKCPQEIY  234 (261)
T ss_pred             cccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-hCCcCCCCCCCCHHHH
Confidence            3322 2244556789999999888899999999999999999986799998887777777664 4556666778999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||..+|++|||+.++++.|+.
T Consensus       235 ~~i~~~l~~~p~~Rpt~~~l~~~L~~  260 (261)
T cd05148         235 KIMLECWAAEPEDRPSFKALREELDN  260 (261)
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHhc
Confidence            99999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG0610|consensus

Probab=99.97  E-value=2.9e-32  Score=225.24  Aligned_cols=172  Identities=16%  Similarity=0.212  Sum_probs=145.9

Q ss_pred             CcccccchhHHHHHhcC---------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC-
Q psy2787           1 MSANFAELNAFQENYTE---------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ-   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~---------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~-   70 (251)
                      ++||||+.|+|....+.         ..+.++.+++-||+|||-.|||+|||||+|  ||+-++|++.|+||.|+.... 
T Consensus       154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPEN--ILvredGHIMLsDFDLS~~~~~  231 (459)
T KOG0610|consen  154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPEN--ILVREDGHIMLSDFDLSLRCPV  231 (459)
T ss_pred             EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcce--eEEecCCcEEeeeccccccCCC
Confidence            46899999999985543         234456667789999999999999999999  999999999999999875411 


Q ss_pred             ------C--------------------------C-c---------------------eeecCCCCcCcccCCCcccCCCC
Q psy2787          71 ------N--------------------------D-C---------------------YVMTERKPLPCPWCPMESLKHNQ   96 (251)
Q Consensus        71 ------~--------------------------~-~---------------------~~~~~~~~~~~~y~aPE~~~~~~   96 (251)
                            .                          . .                     .....+..||-.|.|||++.+..
T Consensus       232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G  311 (459)
T KOG0610|consen  232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG  311 (459)
T ss_pred             CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence                  0                          0 0                     01123467899999999999999


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCC----HHHHH
Q psy2787          97 FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK----FSTLK  172 (251)
Q Consensus        97 ~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps----~~~il  172 (251)
                      .+.++|.|+||+++|||+. |..||.|.+..+.+.+|.......+..+.++..+++||+++|.+||.+|..    +.+|.
T Consensus       312 HgsAVDWWtfGIflYEmLy-G~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK  390 (459)
T KOG0610|consen  312 HGSAVDWWTFGIFLYEMLY-GTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK  390 (459)
T ss_pred             CCchhhHHHHHHHHHHHHh-CCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence            9999999999999999999 999999999999999998887777776788899999999999999999988    88888


Q ss_pred             HHH
Q psy2787         173 DCL  175 (251)
Q Consensus       173 ~~l  175 (251)
                      +|-
T Consensus       391 ~Hp  393 (459)
T KOG0610|consen  391 RHP  393 (459)
T ss_pred             cCc
Confidence            774

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.97  E-value=2.7e-32  Score=230.76  Aligned_cols=170  Identities=15%  Similarity=0.234  Sum_probs=139.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        78 lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~N--ill~~~~~~kL~Dfg~~~~~~~~~  155 (324)
T cd05587          78 FVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDN--VMLDAEGHIKIADFGMCKENIFGG  155 (324)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH--eEEcCCCCEEEeecCcceecCCCC
Confidence            468999999998766432       12346788899999999999999999999  999999999999999987532111


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......||..|+|||++.+..++.++||||+||++|+|++ |+.||.+.+..+....+...  ....+..++.++.++
T Consensus       156 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~l  231 (324)
T cd05587         156 K-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQPPFDGEDEDELFQSIMEH--NVSYPKSLSKEAVSI  231 (324)
T ss_pred             C-ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHh-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence            1 1223467889999999999889999999999999999999 99999988887777777543  344556789999999


Q ss_pred             HHHHhccCCCCCCCH-----HHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKF-----STLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~-----~~il~~l~  176 (251)
                      +.+||..||++|++.     .++++|.+
T Consensus       232 i~~~l~~~P~~R~~~~~~~~~~~~~hp~  259 (324)
T cd05587         232 CKGLLTKHPAKRLGCGPTGERDIREHAF  259 (324)
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhcCCC
Confidence            999999999999986     67776643

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.97  E-value=2.4e-31  Score=217.86  Aligned_cols=174  Identities=26%  Similarity=0.522  Sum_probs=142.0

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||.+.++|.+.+....         ...+.+++.||+|||+++|+||||||+|  |+++.++.+||+|||++.....
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~N--ili~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05070          77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSAN--ILVGDGLVCKIADFGLARLIED  154 (260)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccce--EEEeCCceEEeCCceeeeeccC
Confidence            4678888888888765321         2345678899999999999999999999  9999999999999999987544


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||++.+..++.++|+||||+++|++++.|..||.+.+..+....+. .+...+.+...+..+.
T Consensus       155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  233 (260)
T cd05070         155 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE-RGYRMPCPQDCPISLH  233 (260)
T ss_pred             cccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCCHHHH
Confidence            332222333456679999999888899999999999999999986789998877777666663 4445566677899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||..+|++|||+.++.+.|+.
T Consensus       234 ~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         234 ELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHHhc
Confidence            99999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>KOG0661|consensus

Probab=99.97  E-value=2.4e-32  Score=229.05  Aligned_cols=156  Identities=17%  Similarity=0.203  Sum_probs=127.7

Q ss_pred             CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC-CCC
Q psy2787          19 CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQF   97 (251)
Q Consensus        19 ~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~   97 (251)
                      ...++.|+++||+|+|.+|+.|||+||+|  ||+..+..+||+|||+||.+....  ..+.-..|.+|.|||++.. +-|
T Consensus       112 irnim~QilqGL~hiHk~GfFHRDlKPEN--iLi~~~~~iKiaDFGLARev~Skp--PYTeYVSTRWYRAPEvLLrs~~Y  187 (538)
T KOG0661|consen  112 IRNIMYQILQGLAHIHKHGFFHRDLKPEN--ILISGNDVIKIADFGLAREVRSKP--PYTEYVSTRWYRAPEVLLRSGYY  187 (538)
T ss_pred             HHHHHHHHHHHHHHHHhcCcccccCChhh--eEecccceeEecccccccccccCC--CcchhhhcccccchHHhhhcccc
Confidence            44567889999999999999999999999  999999999999999999854432  1223356788999998875 568


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-------------------CCCCC---------CCCCcHH
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-------------------ERLPR---------PEACPVE  149 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-------------------~~~~~---------~~~~~~~  149 (251)
                      +.+.|||++|||++|+.+ -++-|+|.+..+...+|+.--                   .+++.         -+.++.+
T Consensus       188 s~pvD~wA~GcI~aEl~s-LrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~  266 (538)
T KOG0661|consen  188 SSPVDMWAVGCIMAELYS-LRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSE  266 (538)
T ss_pred             CCchHHHHHHHHHHHHHH-hcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHH
Confidence            999999999999999999 899999998887777775511                   11110         1448889


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +.++|.+|+++||++|||+.++++|.....
T Consensus       267 ~~~li~~ll~WDP~kRpTA~~al~~pffq~  296 (538)
T KOG0661|consen  267 AASLIERLLAWDPDKRPTASQALQHPFFQV  296 (538)
T ss_pred             HHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence            999999999999999999999999875443

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.97  E-value=1.1e-31  Score=221.91  Aligned_cols=172  Identities=26%  Similarity=0.535  Sum_probs=137.8

Q ss_pred             cccccchhHHHHHhcCCC--------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC---ceEEccCC
Q psy2787           2 SANFAELNAFQENYTEPC--------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS---SSSSGDFG   64 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~---~~kl~DFG   64 (251)
                      .+||++.++|.+.+....              ...+.+++.||+|||+++++||||||+|  |+++.++   .+||+|||
T Consensus        87 v~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~n--il~~~~~~~~~~kl~dfg  164 (277)
T cd05036          87 LLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARN--CLLTCKGPGRVAKIADFG  164 (277)
T ss_pred             EEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhe--EEEeccCCCcceEeccCc
Confidence            578888888887664332              1256688899999999999999999999  8887654   69999999


Q ss_pred             CCcccCCCcee-ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC
Q psy2787          65 MMRYSQNDCYV-MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP  143 (251)
Q Consensus        65 la~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  143 (251)
                      +++........ .......+..|+|||++.+..++.++|||||||++|||++.|..||.+.+..++...+. .......+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~-~~~~~~~~  243 (277)
T cd05036         165 MARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVT-GGGRLDPP  243 (277)
T ss_pred             cccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCcCCCC
Confidence            99875332221 12233345679999999888899999999999999999966999999887777666553 34445556


Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       144 ~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ..++..+.+++.+||+.+|++|||+.+++++|.
T Consensus       244 ~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         244 KGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            778999999999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.97  E-value=2e-31  Score=219.46  Aligned_cols=177  Identities=29%  Similarity=0.636  Sum_probs=144.7

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.+++.||+|||+.+++|+||||+|  |+++.++.+||+|||+++.....
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~n--ili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARN--VLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChhe--EEEecCCCeEEccCceeeecccc
Confidence            3578888888888765322        2345678899999999999999999999  99999999999999999875444


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........++..|+|||.+.+..++.++||||||+++||+++.|..||.+....+....+ ..+...+.+..++..+.+
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  239 (270)
T cd05056         161 SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRI-ENGERLPMPPNCPPTLYS  239 (270)
T ss_pred             cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HcCCcCCCCCCCCHHHHH
Confidence            3333333344567999999988889999999999999999986599999888776666655 345556667788999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ++.+||..+|++|||+.++++.|..+..
T Consensus       240 li~~~l~~~P~~Rpt~~~~~~~l~~~~~  267 (270)
T cd05056         240 LMTKCWAYDPSKRPRFTELKAQLSDILQ  267 (270)
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.97  E-value=3.8e-32  Score=226.06  Aligned_cols=168  Identities=17%  Similarity=0.160  Sum_probs=131.5

Q ss_pred             cccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||++ +++.+.+...         ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        87 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~  163 (290)
T cd07862          87 VFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN--ILVTSSGQIKLADFGLARIYSFQ  163 (290)
T ss_pred             EEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH--EEEcCCCCEEEccccceEeccCC
Confidence            467776 4555544321         23456788899999999999999999999  99999999999999999865433


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL------------  140 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~------------  140 (251)
                        .......++..|+|||++.+..++.++||||+||++|||++ |..||.+....+....+......+            
T Consensus       164 --~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  240 (290)
T cd07862         164 --MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP  240 (290)
T ss_pred             --cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHc-CCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhccc
Confidence              12344568889999999988889999999999999999999 999999877666555553211000            


Q ss_pred             -------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         141 -------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       141 -------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                                   ...+.++..+.+++.+||+.||++|||+.++++|.
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp  288 (290)
T cd07862         241 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHP  288 (290)
T ss_pred             chhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCC
Confidence                         00134677889999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=1.1e-31  Score=219.26  Aligned_cols=173  Identities=43%  Similarity=0.847  Sum_probs=143.0

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||++.++|.+.+....         ...+.|++.||+|||+++|+|+||+|+|  |+++.++.+||+|||+++.....
T Consensus        73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~n--il~~~~~~~kl~dfg~~~~~~~~  150 (257)
T cd05040          73 VTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARN--ILLASDDKVKIGDFGLMRALPQN  150 (257)
T ss_pred             EEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCccc--EEEecCCEEEecccccccccccc
Confidence            578998889888765433         2234577899999999999999999999  99999999999999999875432


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .  +.......++..|+|||++.+..++.++|||||||++|+|+++|..||...+..+....+.........+...+..+
T Consensus       151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (257)
T cd05040         151 EDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDI  230 (257)
T ss_pred             ccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHH
Confidence            1  11222345677899999999888999999999999999999879999988877777777655555555666788999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+++.+||..+|++|||+.++++.|.
T Consensus       231 ~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         231 YNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            99999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.97  E-value=2.1e-31  Score=227.11  Aligned_cols=156  Identities=28%  Similarity=0.536  Sum_probs=127.3

Q ss_pred             CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          23 LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        23 ~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                      +.|+++||+|||+++|+||||||+|  |+++.++.+||+|||++...... .........++..|+|||++.+..++.++
T Consensus       185 ~~qi~~al~~lH~~~i~H~dikp~N--il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  262 (343)
T cd05103         185 SFQVAKGMEFLASRKCIHRDLAARN--ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS  262 (343)
T ss_pred             HHHHHHHHHHHHhCCeecCCCccCe--EEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchh
Confidence            3478899999999999999999999  99999999999999999864322 11222334456779999999888899999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         102 DAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       102 Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ||||||+++|++++.|..||.+.............+...+.+...++++.+++.+||+.+|++|||+.+++++|..+.+
T Consensus       263 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~  341 (343)
T cd05103         263 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ  341 (343)
T ss_pred             hHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            9999999999999768999987654433333334555566666788899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.97  E-value=1.8e-32  Score=232.28  Aligned_cols=171  Identities=15%  Similarity=0.206  Sum_probs=140.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|...+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        72 lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~N--Ill~~~~~~kL~DfG~~~~~~~~~  149 (328)
T cd05593          72 FVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLEN--LMLDKDGHIKITDFGLCKEGITDA  149 (328)
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHH--eEECCCCcEEEecCcCCccCCCcc
Confidence            468999999987765432       23356778899999999999999999999  999999999999999987632221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+....+...  ....+..++.++.++
T Consensus       150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-G~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~l  225 (328)
T cd05593         150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELILME--DIKFPRTLSADAKSL  225 (328)
T ss_pred             -cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhh-CCCCCCCCCHHHHHHHhccC--CccCCCCCCHHHHHH
Confidence             12234568889999999998889999999999999999999 99999887777666665433  334566789999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      +.+||..||++|+     ++.++++|.+.
T Consensus       226 i~~~L~~dP~~R~~~~~~~~~~il~h~~~  254 (328)
T cd05593         226 LSGLLIKDPNKRLGGGPDDAKEIMRHSFF  254 (328)
T ss_pred             HHHHcCCCHHHcCCCCCCCHHHHhcCCCc
Confidence            9999999999997     89999988654

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG0200|consensus

Probab=99.97  E-value=6.8e-32  Score=244.54  Aligned_cols=176  Identities=27%  Similarity=0.539  Sum_probs=151.1

Q ss_pred             cccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCce
Q psy2787           2 SANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSS   58 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~   58 (251)
                      ..||+..|+|+.+..+.+                       ..+..|++.|++||++.+++||||-..|  ||+..+..+
T Consensus       380 v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRN--VLi~~~~~~  457 (609)
T KOG0200|consen  380 IVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARN--VLITKNKVI  457 (609)
T ss_pred             EEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhh--EEecCCCEE
Confidence            568888888888776554                       2346688899999999999999999999  999999999


Q ss_pred             EEccCCCCcccCCCceee-cCCC-CcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-hhHHHHHHHh
Q psy2787          59 SSGDFGMMRYSQNDCYVM-TERK-PLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN-GMQILQKIDR  135 (251)
Q Consensus        59 kl~DFGla~~~~~~~~~~-~~~~-~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~-~~~~~~~i~~  135 (251)
                      ||+|||+|+......+.. .... ..+..|||||.+....|+.++||||||+++||++++|..||++.. ..++.+. ..
T Consensus       458 kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~-l~  536 (609)
T KOG0200|consen  458 KIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEF-LK  536 (609)
T ss_pred             EEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHH-Hh
Confidence            999999999754444333 3222 267789999999999999999999999999999999999999966 5667664 47


Q ss_pred             cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         136 EGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       136 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .|.++..|.+|+.+++++|..||..+|++||++.++.+.+.....
T Consensus       537 ~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  537 EGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             cCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999988543

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.97  E-value=7.6e-32  Score=223.90  Aligned_cols=172  Identities=16%  Similarity=0.145  Sum_probs=131.3

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.+.+......       ....++.|++.||+|||+.+|+||||||+|  |+++.++.+||+|||++.......
T Consensus        77 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~N--ill~~~~~~kl~Dfg~~~~~~~~~  154 (287)
T cd07848          77 LVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPEN--LLISHNDVLKLCDFGFARNLSEGS  154 (287)
T ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEEcCCCcEEEeeccCcccccccc
Confidence            46788887655543221       123467788899999999999999999999  999999999999999998754332


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC----------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG----------------  137 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~----------------  137 (251)
                      ........++..|+|||++.+..++.++||||+||++|||++ |+.||.+.+..+....+....                
T Consensus       155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07848         155 NANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSD-GQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR  233 (287)
T ss_pred             cccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence            222334567888999999998889999999999999999999 999998866544332221100                


Q ss_pred             ---CCCCC-----------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         138 ---ERLPR-----------PEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       138 ---~~~~~-----------~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                         ...+.           ...++.++.+++.+||+.||++|||++++++|-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp  285 (287)
T cd07848         234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHP  285 (287)
T ss_pred             hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCC
Confidence               00000           123677899999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=5.5e-32  Score=223.48  Aligned_cols=173  Identities=27%  Similarity=0.520  Sum_probs=141.6

Q ss_pred             CcccccchhHHHHHhcCCC-----------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccC
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDF   63 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DF   63 (251)
                      +.+||++.++|.+.+....                 ...+.|++.||.|||+++|+||||||+|  |+++.++.+||+||
T Consensus        86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~n--ill~~~~~~kl~df  163 (277)
T cd05032          86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARN--CMVAEDLTVKIGDF  163 (277)
T ss_pred             EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChhe--EEEcCCCCEEECCc
Confidence            3578888888887664321                 1245678899999999999999999999  99999999999999


Q ss_pred             CCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC
Q psy2787          64 GMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR  142 (251)
Q Consensus        64 Gla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~  142 (251)
                      |+++...... ........++..|+|||.+.+..++.++|||||||++||+++.|..||.+.+..+....+. .+.....
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~  242 (277)
T cd05032         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-DGGHLDL  242 (277)
T ss_pred             ccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-cCCCCCC
Confidence            9998643322 2223344567789999999888899999999999999999976899998888777776664 5555566


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +..++.++.+++.+||..+|++|||+.+++..|+
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         243 PENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            7778999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.6e-32  Score=231.65  Aligned_cols=171  Identities=13%  Similarity=0.191  Sum_probs=140.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++.....  
T Consensus        78 lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N--il~~~~~~~kL~Dfg~a~~~~~--  153 (333)
T cd05600          78 LAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPEN--FLIDASGHIKLTDFGLSKGIVT--  153 (333)
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH--EEECCCCCEEEEeCcCCccccc--
Confidence            468999999998876432       12345688899999999999999999999  9999999999999999986443  


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC------CCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP------EACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~------~~~~  147 (251)
                        ......||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..+....+.........+      ..++
T Consensus       154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s  230 (333)
T cd05600         154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLC-GFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLS  230 (333)
T ss_pred             --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhh-CCCCCCCCCHHHHHHHHHhccccccCCCCCccccccC
Confidence              2344568889999999998899999999999999999999 999999887777666654433222222      2468


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .++.+++.+||..+|++||++.++++|.+..
T Consensus       231 ~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~  261 (333)
T cd05600         231 DEAWDLITKLINDPSRRFGSLEDIKNHPFFK  261 (333)
T ss_pred             HHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence            8999999999999999999999999986543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.97  E-value=1.1e-31  Score=222.43  Aligned_cols=172  Identities=28%  Similarity=0.557  Sum_probs=138.5

Q ss_pred             cccccchhHHHHHhcCC----------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceE
Q psy2787           2 SANFAELNAFQENYTEP----------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSS   59 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~----------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~k   59 (251)
                      .+||++.++|.+.+...                      ....+.|++.|++|||+++|+||||||+|  |++++++.+|
T Consensus        85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~n--il~~~~~~~k  162 (280)
T cd05092          85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRN--CLVGQGLVVK  162 (280)
T ss_pred             EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhh--EEEcCCCCEE
Confidence            56888877777655421                      12235678899999999999999999999  9999999999


Q ss_pred             EccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC
Q psy2787          60 SGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE  138 (251)
Q Consensus        60 l~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~  138 (251)
                      |+|||+++...... ........++..|+|||++.+..++.++|||||||++|||+++|..||......+....+. .+.
T Consensus       163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~  241 (280)
T cd05092         163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT-QGR  241 (280)
T ss_pred             ECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH-cCc
Confidence            99999987643222 2223334456789999999988899999999999999999987899998877666666653 444


Q ss_pred             CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         139 RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ....+..++..+.+++.+||+.||++||++.++.+.|+
T Consensus       242 ~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         242 ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            45556778999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.97  E-value=3.2e-32  Score=230.27  Aligned_cols=173  Identities=16%  Similarity=0.213  Sum_probs=141.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.......       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        72 lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~~kL~Dfg~~~~~~~~~  149 (323)
T cd05595          72 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN--LMLDKDGHIKITDFGLCKEGISDG  149 (323)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH--EEEcCCCCEEecccHHhccccCCC
Confidence            468999999987765432       23356788899999999999999999999  999999999999999987532221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......|+..|+|||++.+..++.++|||||||++|||++ |..||.+.+.......+....  ...+..+++++.++
T Consensus       150 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-g~~Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~l  225 (323)
T cd05595         150 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSL  225 (323)
T ss_pred             C-ccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHHHH
Confidence            1 2234568889999999998889999999999999999999 999998887777766664433  33456789999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHhhc
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYRLT  179 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~~~  179 (251)
                      +.+||..||++|+     ++.++++|-+-..
T Consensus       226 i~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         226 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             HHHHccCCHHHhCCCCCCCHHHHHcCCCcCC
Confidence            9999999999998     8999998865443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.97  E-value=2.4e-31  Score=222.82  Aligned_cols=176  Identities=24%  Similarity=0.529  Sum_probs=141.8

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |.+||+..++|.+.+.....         .++.+++.||+|||+++|+|+||||+|  |+++.++.+|++|||+++....
T Consensus       116 lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~N--il~~~~~~~~l~dfg~~~~~~~  193 (302)
T cd05055         116 VITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN--VLLTHGKIVKICDFGLARDIMN  193 (302)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccce--EEEcCCCeEEECCCcccccccC
Confidence            46789999999887654322         244578899999999999999999999  9999999999999999986433


Q ss_pred             Cc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          72 DC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        72 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .. ........++..|+|||++.+..++.++||||+|+++|+|++.|..||.+....+........+.+...+...+.++
T Consensus       194 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (302)
T cd05055         194 DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEI  273 (302)
T ss_pred             CCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHH
Confidence            22 12223345567899999999888999999999999999999768999987765554444444555555566788999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+++.+||..+|++|||+.++++.|.++
T Consensus       274 ~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         274 YDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            9999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG0604|consensus

Probab=99.97  E-value=1.6e-32  Score=218.53  Aligned_cols=174  Identities=14%  Similarity=0.236  Sum_probs=144.5

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC---CceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS---SSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~---~~~kl~DFGla~~   68 (251)
                      |.+|+++.|+|+.++++...         ..+.||+.|+.|||+.+|.||||||+|  +|...+   -.+||+|||+|+.
T Consensus       136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpEN--LLyt~t~~na~lKLtDfGFAK~  213 (400)
T KOG0604|consen  136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPEN--LLYTTTSPNAPLKLTDFGFAKE  213 (400)
T ss_pred             eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhh--eeeecCCCCcceEecccccccc
Confidence            57899999999998876554         345677899999999999999999999  666543   3799999999997


Q ss_pred             cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC----hhHHHHHHHhcCCCCCCC-
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN----GMQILQKIDREGERLPRP-  143 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~-  143 (251)
                      -...  ....+.+.|+.|+|||++....|+..+|+||+||++|-|++ |.+||.+..    ...+..+|....+.+|.+ 
T Consensus       214 t~~~--~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLC-GyPPFYS~hg~aispgMk~rI~~gqy~FP~pE  290 (400)
T KOG0604|consen  214 TQEP--GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLAISPGMKRRIRTGQYEFPEPE  290 (400)
T ss_pred             cCCC--ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhc-CCCcccccCCccCChhHHhHhhccCccCCChh
Confidence            4432  23456678899999999999999999999999999999999 999997643    245667776676666655 


Q ss_pred             -CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         144 -EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       144 -~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                       ..+++..+++|+.+|..+|.+|.|+.++++|.|-..
T Consensus       291 Ws~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~  327 (400)
T KOG0604|consen  291 WSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ  327 (400)
T ss_pred             HhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence             568899999999999999999999999999987543

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.97  E-value=1.9e-31  Score=218.22  Aligned_cols=172  Identities=26%  Similarity=0.542  Sum_probs=140.2

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||+..++|.+.+...        ...++.+++.||+|||+.+|+|+||||+|  |+++.++.+||+|||+++.....
T Consensus        76 lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~n--ili~~~~~~kl~d~g~~~~~~~~  153 (256)
T cd05113          76 IVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARN--CLVDDQGCVKVSDFGLSRYVLDD  153 (256)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcce--EEEcCCCCEEECCCccceecCCC
Confidence            357888888887765432        13356777899999999999999999999  99999999999999999875444


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........++..|++||++.+..++.++||||||+++|+|++.|..||......+....+. .+.+...+...+..+.+
T Consensus       154 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  232 (256)
T cd05113         154 EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS-QGLRLYRPHLASEKVYA  232 (256)
T ss_pred             ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHh-cCCCCCCCCCCCHHHHH
Confidence            33333334566789999999888899999999999999999976899998877766666664 34444555667899999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.+||..+|.+||++.+++..+
T Consensus       233 li~~cl~~~p~~Rp~~~~ll~~~  255 (256)
T cd05113         233 IMYSCWHEKAEERPTFQQLLSSI  255 (256)
T ss_pred             HHHHHcCCCcccCCCHHHHHHhh
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.97  E-value=1.4e-32  Score=233.88  Aligned_cols=168  Identities=17%  Similarity=0.153  Sum_probs=141.4

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||+..++|.+.+....       ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++...... 
T Consensus       108 lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~N--ILl~~~~~ikL~DFG~a~~~~~~-  184 (340)
T PTZ00426        108 LVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPEN--LLLDKDGFIKMTDFGFAKVVDTR-  184 (340)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHH--EEECCCCCEEEecCCCCeecCCC-
Confidence            4689999999988765322       3456788899999999999999999999  99999999999999999875432 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         .....||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+.......+....  ...+..++..+.++
T Consensus       185 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~l  258 (340)
T PTZ00426        185 ---TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILV-GCPPFYANEPLLIYQKILEGI--IYFPKFLDNNCKHL  258 (340)
T ss_pred             ---cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhc-CCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHHHH
Confidence               234568889999999998889999999999999999999 999999887777777775433  33456788999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      +.+|++.||++|+     +++++++|.+.
T Consensus       259 i~~~l~~dp~~R~~~~~~~~~~~~~hp~f  287 (340)
T PTZ00426        259 MKKLLSHDLTKRYGNLKKGAQNVKEHPWF  287 (340)
T ss_pred             HHHHcccCHHHcCCCCCCCHHHHHcCCCc
Confidence            9999999999995     89999988654

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=3.6e-32  Score=229.95  Aligned_cols=171  Identities=18%  Similarity=0.233  Sum_probs=141.3

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+....       ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~  154 (323)
T cd05584          77 LILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPEN--ILLDAQGHVKLTDFGLCKESIHEG  154 (323)
T ss_pred             EEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--eEECCCCCEEEeeCcCCeecccCC
Confidence            4689999999988764322       2345688899999999999999999999  999999999999999987532221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......|++.|+|||++.+..++.++|||||||++|||++ |..||.+.+.......+...  ....+..++.++.++
T Consensus       155 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l  230 (323)
T cd05584         155 T-VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLT-GAPPFTAENRKKTIDKILKG--KLNLPPYLTPEARDL  230 (323)
T ss_pred             C-cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence            1 2234568899999999998888999999999999999999 99999988777766666443  345566789999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      +.+||+.+|++||     ++.++++|.+.
T Consensus       231 i~~~l~~~p~~R~~~~~~~~~~l~~h~~~  259 (323)
T cd05584         231 LKKLLKRNPSSRLGAGPGDAAEVQSHPFF  259 (323)
T ss_pred             HHHHcccCHhHcCCCCCCCHHHHhcCCCc
Confidence            9999999999999     89999887653

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.97  E-value=2.7e-31  Score=218.32  Aligned_cols=174  Identities=27%  Similarity=0.577  Sum_probs=142.7

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC-C
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN-D   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~-~   72 (251)
                      .+||++.++|.+++....        ...+.+++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.... .
T Consensus        83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~n--ili~~~~~~~l~dfg~~~~~~~~~  160 (266)
T cd05033          83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARN--ILVNSNLVCKVSDFGLSRRLEDSE  160 (266)
T ss_pred             EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcce--EEEcCCCCEEECccchhhcccccc
Confidence            578898888887764422        2345677899999999999999999999  9999999999999999987642 2


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........++..|+|||.+.+..++.++||||||+++|++++.|..||......+....+. .+...+.+..++..+.+
T Consensus       161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~  239 (266)
T cd05033         161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVE-DGYRLPPPMDCPSALYQ  239 (266)
T ss_pred             cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHH
Confidence            11122233456789999999988899999999999999999977999998877777766663 44555666778999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.+||+.+|++||++.+++++|..+
T Consensus       240 li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         240 LMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            99999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.97  E-value=6.6e-32  Score=228.39  Aligned_cols=170  Identities=18%  Similarity=0.234  Sum_probs=139.9

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      |.+||++.++|.......      ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++...... 
T Consensus        79 lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~N--ill~~~~~~kL~Dfg~~~~~~~~~-  155 (324)
T cd05589          79 FVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDN--LLLDTEGFVKIADFGLCKEGMGFG-  155 (324)
T ss_pred             EEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHH--eEECCCCcEEeCcccCCccCCCCC-
Confidence            468999999998766532      22356778899999999999999999999  999999999999999987532221 


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALM  154 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li  154 (251)
                      .......|++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+....  ...+..++.++.+++
T Consensus       156 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-G~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li  232 (324)
T cd05589         156 DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLV-GESPFPGDDEEEVFDSIVNDE--VRYPRFLSREAISIM  232 (324)
T ss_pred             CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHHH
Confidence            12234568889999999998889999999999999999999 999999888777777765443  334567899999999


Q ss_pred             HHHhccCCCCCC-----CHHHHHHHHH
Q psy2787         155 RQCWSKNPAERP-----KFSTLKDCLY  176 (251)
Q Consensus       155 ~~cl~~dP~~Rp-----s~~~il~~l~  176 (251)
                      .+||..||++||     ++.++++|.+
T Consensus       233 ~~~L~~dP~~R~~~~~~~~~~l~~~~~  259 (324)
T cd05589         233 RRLLRRNPERRLGSGEKDAEDVKKQPF  259 (324)
T ss_pred             HHHhhcCHhHcCCCCCCCHHHHhhCCC
Confidence            999999999999     5778877654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.97  E-value=2.5e-32  Score=235.03  Aligned_cols=174  Identities=15%  Similarity=0.163  Sum_probs=141.8

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.+...      ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++........
T Consensus       120 lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~N--ILl~~~~~~kL~DfG~~~~~~~~~~  197 (370)
T cd05596         120 MVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN--MLLDKSGHLKLADFGTCMKMDANGM  197 (370)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH--EEEcCCCCEEEEeccceeeccCCCc
Confidence            468999999988865432      22345688899999999999999999999  9999999999999999987544333


Q ss_pred             eecCCCCcCcccCCCcccCCC----CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          75 VMTERKPLPCPWCPMESLKHN----QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~----~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      .......||+.|+|||++.+.    .++.++|||||||++|||++ |..||.+.+....+..+.........+  ..++.
T Consensus       198 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  276 (370)
T cd05596         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV-GDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISK  276 (370)
T ss_pred             ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHh-CCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCH
Confidence            233456789999999998653    37889999999999999999 999999888777777775544333333  35789


Q ss_pred             HHHHHHHHHhccCCCC--CCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAE--RPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~--Rps~~~il~~l~~  177 (251)
                      ++.+++.+||..+|++  |+++.++++|.+-
T Consensus       277 ~~~~li~~~L~~~p~r~~R~s~~ell~h~~~  307 (370)
T cd05596         277 QAKDLICAFLTDREVRLGRNGVDEIKSHPFF  307 (370)
T ss_pred             HHHHHHHHHccChhhccCCCCHHHHhcCccc
Confidence            9999999999999988  9999999998754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.97  E-value=1.6e-31  Score=224.99  Aligned_cols=178  Identities=26%  Similarity=0.550  Sum_probs=143.5

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+++....                       ..++.|++.||+|||++||+||||||+|  |+++.++.
T Consensus        95 lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N--ill~~~~~  172 (314)
T cd05099          95 VIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN--VLVTEDNV  172 (314)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee--EEEcCCCc
Confidence            3578999888887764321                       1124588999999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+++....... .......++..|+|||++.+..++.++||||||+++|++++.|..||.+....+....+. .
T Consensus       173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~-~  251 (314)
T cd05099         173 MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLR-E  251 (314)
T ss_pred             EEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-c
Confidence            99999999986543221 112223344579999999888899999999999999999987889998887777776663 4


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +.....+..++.++.+++.+||..+|++|||+.++++.|..+...
T Consensus       252 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~  296 (314)
T cd05099         252 GHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAA  296 (314)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHH
Confidence            445556677899999999999999999999999999999877554

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.97  E-value=2.1e-31  Score=221.65  Aligned_cols=176  Identities=26%  Similarity=0.493  Sum_probs=142.1

Q ss_pred             CcccccchhHHHHHhcCCC-----------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccC
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDF   63 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DF   63 (251)
                      |.+||++.++|.+++....                 ..++.+++.||.|||+++|+||||||+|  |+++.++.+||+||
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~n--ili~~~~~~~L~Df  163 (288)
T cd05061          86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARN--CMVAHDFTVKIGDF  163 (288)
T ss_pred             EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChhe--EEEcCCCcEEECcC
Confidence            4689998888888764311                 1245678899999999999999999999  99999999999999


Q ss_pred             CCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC
Q psy2787          64 GMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR  142 (251)
Q Consensus        64 Gla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~  142 (251)
                      |+++....... .......++..|+|||.+.+..++.++|+|||||++|||+++|..||.+....+....+. .+.....
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~  242 (288)
T cd05061         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM-DGGYLDQ  242 (288)
T ss_pred             CccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCC
Confidence            99986433221 122233456779999999988899999999999999999986789998887777666654 3444455


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +..++..+.+++.+||+.+|++|||+.++++.+.+..
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         243 PDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            6678899999999999999999999999999887754

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.97  E-value=1.9e-31  Score=223.49  Aligned_cols=178  Identities=26%  Similarity=0.546  Sum_probs=143.7

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.|++.+......        ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~N--ill~~~~~~kL~Dfg~~~~~~~~  162 (303)
T cd05110          85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARN--VLVKSPNHVKITDFGLARLLEGD  162 (303)
T ss_pred             eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccce--eeecCCCceEEccccccccccCc
Confidence            4578899898888765422        2345688899999999999999999999  99999999999999999875432


Q ss_pred             cee-ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CYV-MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ... ......++..|+|||++.+..++.++||||||+++||++++|..||.+....+....+ ..+...+.+..++..+.
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  241 (303)
T cd05110         163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERLPQPPICTIDVY  241 (303)
T ss_pred             ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCCCCCCCCCHHHH
Confidence            211 2223345668999999998889999999999999999997789999887655554444 45556666677889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +++.+||..+|++||++.++++.+..+...
T Consensus       242 ~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         242 MVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            999999999999999999999998876544

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.97  E-value=1.9e-32  Score=231.56  Aligned_cols=168  Identities=18%  Similarity=0.256  Sum_probs=138.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +++||++.++|...+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        78 lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N--ill~~~~~~kL~DfG~~~~~~~~~  155 (323)
T cd05616          78 FVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDN--VMLDSEGHIKIADFGMCKENMWDG  155 (323)
T ss_pred             EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHH--eEECCCCcEEEccCCCceecCCCC
Confidence            468999999998766432       23356788899999999999999999999  999999999999999997533221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..++...+....  ...+..++.++.++
T Consensus       156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~l  231 (323)
T cd05616         156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSIMEHN--VAYPKSMSKEAVAI  231 (323)
T ss_pred             -CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHh-CCCCCCCCCHHHHHHHHHhCC--CCCCCcCCHHHHHH
Confidence             12234568899999999999999999999999999999999 999999988888877775443  34456789999999


Q ss_pred             HHHHhccCCCCCCCH-----HHHHHH
Q psy2787         154 MRQCWSKNPAERPKF-----STLKDC  174 (251)
Q Consensus       154 i~~cl~~dP~~Rps~-----~~il~~  174 (251)
                      +.+|++.+|++|+++     .++++|
T Consensus       232 i~~~l~~~p~~R~~~~~~~~~~i~~h  257 (323)
T cd05616         232 CKGLMTKHPGKRLGCGPEGERDIKEH  257 (323)
T ss_pred             HHHHcccCHHhcCCCCCCCHHHHhcC
Confidence            999999999999985     666655

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.97  E-value=1.7e-31  Score=226.48  Aligned_cols=172  Identities=19%  Similarity=0.234  Sum_probs=134.2

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.++|.+.+....       ..++.+++.||.|||++ +|+||||||+|  |+++.++.+||+|||++......
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~  157 (331)
T cd06649          80 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSN--ILVNSRGEIKLCDFGVSGQLIDS  157 (331)
T ss_pred             EEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhh--EEEcCCCcEEEccCccccccccc
Confidence            4689999999888765322       24566788999999986 69999999999  99999999999999998865332


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh-----------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR-----------------  135 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~-----------------  135 (251)
                         ......++..|+|||++.+..++.++|||||||++|||++ |+.||...+..++...+..                 
T Consensus       158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (331)
T cd06649         158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAI-GRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRP  233 (331)
T ss_pred             ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHhcccccccccCCccccCccc
Confidence               2234568889999999998889999999999999999999 9999976554433221110                 


Q ss_pred             ----------------------------cCCCCCC-CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         136 ----------------------------EGERLPR-PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       136 ----------------------------~~~~~~~-~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                                                  ....+.. ...++.++.+++.+||..||++|||+.++++|.+-.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~  305 (331)
T cd06649         234 RPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIK  305 (331)
T ss_pred             ccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHh
Confidence                                        0111111 124678999999999999999999999999997643

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.97  E-value=2e-32  Score=231.31  Aligned_cols=171  Identities=16%  Similarity=0.199  Sum_probs=141.4

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|...+....       ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        73 lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~N--ill~~~~~~kL~Dfg~~~~~~~~~  150 (321)
T cd05591          73 FVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDN--ILLDAEGHCKLADFGMCKEGILNG  150 (321)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH--eEECCCCCEEEeecccceecccCC
Confidence            4689999999987654322       2346778899999999999999999999  999999999999999987633221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......|+..|+|||++.+..++.++||||+||++|+|++ |+.||.+.+..+....+....  ...+..++.++.++
T Consensus       151 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~t-g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~l  226 (321)
T cd05591         151 V-TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMA-GQPPFEADNEDDLFESILHDD--VLYPVWLSKEAVSI  226 (321)
T ss_pred             c-cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhc-CCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHH
Confidence            1 2234568889999999998889999999999999999999 999999988888887775443  33445688999999


Q ss_pred             HHHHhccCCCCCC-------CHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERP-------KFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rp-------s~~~il~~l~~  177 (251)
                      +.+||+.||++|+       ++.++++|.+.
T Consensus       227 l~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~  257 (321)
T cd05591         227 LKAFMTKNPNKRLGCVASQGGEDAIKQHPFF  257 (321)
T ss_pred             HHHHhccCHHHcCCCCCCCCCHHHHhcCCcc
Confidence            9999999999999       88888888653

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.97  E-value=5.4e-32  Score=228.20  Aligned_cols=170  Identities=16%  Similarity=0.210  Sum_probs=138.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~N--il~~~~~~~kl~Dfg~~~~~~~~~  150 (316)
T cd05619          73 FVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDN--ILLDTDGHIKIADFGMCKENMLGD  150 (316)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHH--EEECCCCCEEEccCCcceECCCCC
Confidence            468999999998876532       12356788899999999999999999999  999999999999999987532111


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||..|+|||++.+..++.++||||+||++|||++ |..||.+.+..+....+....  +..+..++.++.++
T Consensus       151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-G~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~l  226 (316)
T cd05619         151 -AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLI-GQSPFHGHDEEELFQSIRMDN--PCYPRWLTREAKDI  226 (316)
T ss_pred             -CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHHH
Confidence             12234567889999999998889999999999999999999 999999888777777664332  33455688999999


Q ss_pred             HHHHhccCCCCCCCHH-HHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFS-TLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~-~il~~l~  176 (251)
                      +.+||..||++||++. ++++|.+
T Consensus       227 i~~~l~~~P~~R~~~~~~l~~h~~  250 (316)
T cd05619         227 LVKLFVREPERRLGVKGDIRQHPF  250 (316)
T ss_pred             HHHHhccCHhhcCCChHHHHcCcc
Confidence            9999999999999996 6766543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.97  E-value=4e-31  Score=216.54  Aligned_cols=174  Identities=28%  Similarity=0.596  Sum_probs=143.0

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||...++|.+......         ...+.+++.||+|||+.+++||||||+|  |+++.++.++|+|||++.....
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~n--i~i~~~~~~~l~dfg~~~~~~~  154 (260)
T cd05067          77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAAN--ILVSETLCCKIADFGLARLIED  154 (260)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHh--EEEcCCCCEEEccCcceeecCC
Confidence            3578888888888654322         1235577899999999999999999999  9999999999999999987653


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||++.+..++.++||||||+++||+++.|..||.+.+..+....+ ..+...+.+..++.++.
T Consensus       155 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  233 (260)
T cd05067         155 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNL-ERGYRMPRPDNCPEELY  233 (260)
T ss_pred             CCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHH-HcCCCCCCCCCCCHHHH
Confidence            33333334456678999999998888999999999999999997689999888777766665 34555566677889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||..+|++||++++++..|+.
T Consensus       234 ~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         234 ELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHccCChhhCCCHHHHHHHhhc
Confidence            99999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.97  E-value=3.1e-31  Score=219.52  Aligned_cols=176  Identities=24%  Similarity=0.485  Sum_probs=141.5

Q ss_pred             cccccchhHHHHHhcCCC---------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      ..||++.++|.+++....               ..++.+++.||+|||+++|+||||||+|  |+++.++.+||+|||++
T Consensus        87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~n--il~~~~~~~kl~d~g~~  164 (280)
T cd05043          87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARN--CVIDEELQVKITDNALS  164 (280)
T ss_pred             EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhh--EEEcCCCcEEECCCCCc
Confidence            456777777777654321               1245578899999999999999999999  99999999999999999


Q ss_pred             cccCCCcee-ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q psy2787          67 RYSQNDCYV-MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEA  145 (251)
Q Consensus        67 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  145 (251)
                      +........ ......++..|+|||++.+..++.++||||||+++||+++.|..||.+.+..++...+. .+.....+..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~  243 (280)
T cd05043         165 RDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK-DGYRLAQPIN  243 (280)
T ss_pred             ccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHH-cCCCCCCCCc
Confidence            864332222 22334556779999999888899999999999999999987899998877777666553 4555555667


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ++.++.+++.+||..+|++|||+.++++.|..+..
T Consensus       244 ~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         244 CPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            89999999999999999999999999999987754

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>KOG0582|consensus

Probab=99.97  E-value=1.9e-31  Score=222.18  Aligned_cols=172  Identities=17%  Similarity=0.222  Sum_probs=135.2

Q ss_pred             cccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +|.|+..|++++-+...         ...+++++++||.|||.+|-||||||+.|  ||++.+|.+||+|||.+..+-+.
T Consensus       102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgn--ILi~~dG~VkLadFgvsa~l~~~  179 (516)
T KOG0582|consen  102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGN--ILIDSDGTVKLADFGVSASLFDS  179 (516)
T ss_pred             eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceeccccccc--EEEcCCCcEEEcCceeeeeeccc
Confidence            46788888888744322         23467788899999999999999999999  99999999999999987763222


Q ss_pred             --ceeec-CCCCcCcccCCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC-----
Q psy2787          73 --CYVMT-ERKPLPCPWCPMESLKH--NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR-----  142 (251)
Q Consensus        73 --~~~~~-~~~~~~~~y~aPE~~~~--~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~-----  142 (251)
                        +.... .+..||+.|||||++..  ..|+.|+||||||++..|+.+ |..||....+.+++-.-.+...+.+.     
T Consensus       180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~-G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~  258 (516)
T KOG0582|consen  180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAH-GHAPFSKYPPMKVLLLTLQNDPPTLLTSGLD  258 (516)
T ss_pred             CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhc-CCCCcccCChHHHHHHHhcCCCCCcccccCC
Confidence              11222 66789999999999543  468999999999999999999 99999998887766544333222111     


Q ss_pred             ---CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         143 ---PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       143 ---~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                         ....+..++.++..||.+||.+|||++++++|-.
T Consensus       259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~F  295 (516)
T KOG0582|consen  259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAF  295 (516)
T ss_pred             hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHH
Confidence               1336668999999999999999999999998743

>KOG0611|consensus

Probab=99.97  E-value=2.8e-32  Score=225.21  Aligned_cols=169  Identities=15%  Similarity=0.271  Sum_probs=148.7

Q ss_pred             CcccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.|||+..|+|.++..       ...++|++||.+|+.|+|.++++|||||.+|  ||+|.|+++||+|||++..+....
T Consensus       130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLEN--ILLD~N~NiKIADFGLSNly~~~k  207 (668)
T KOG0611|consen  130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLEN--ILLDQNNNIKIADFGLSNLYADKK  207 (668)
T ss_pred             EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhh--eeecCCCCeeeeccchhhhhcccc
Confidence            4699999999999764       3467899999999999999999999999999  999999999999999999876653


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFS-QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        ...+.+|.+-|.+||++++.+|. ..+|.||+|++||.++. |.+||+|.+...+...|....++-+   ..|....-
T Consensus       208 --fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVy-GtMPFDG~Dhk~lvrQIs~GaYrEP---~~PSdA~g  281 (668)
T KOG0611|consen  208 --FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVY-GTMPFDGRDHKRLVRQISRGAYREP---ETPSDASG  281 (668)
T ss_pred             --HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhh-cccccCCchHHHHHHHhhcccccCC---CCCchHHH
Confidence              34567888999999999998875 78999999999999999 9999999999888888866555543   34557889


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ||+.||..+|++|.|+.+|..|.|-
T Consensus       282 LIRwmLmVNP~RRATieDiAsHWWv  306 (668)
T KOG0611|consen  282 LIRWMLMVNPERRATIEDIASHWWV  306 (668)
T ss_pred             HHHHHHhcCcccchhHHHHhhhhee
Confidence            9999999999999999999999873

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.97  E-value=2.9e-32  Score=231.24  Aligned_cols=172  Identities=17%  Similarity=0.171  Sum_probs=135.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        82 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~N--ili~~~~~~kl~DfG~~~~~~~~~  159 (332)
T cd05614          82 LILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLEN--ILLDSEGHVVLTDFGLSKEFLSEE  159 (332)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHH--eEECCCCCEEEeeCcCCccccccC
Confidence            468999999998866432       22345688899999999999999999999  999999999999999998643332


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCC----hhHHHHHHHhcCCCCCCCCCCcH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLN----GMQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      ........||..|+|||++.+. .++.++|||||||++|||++ |..||....    ...+...+.  ...++.+..++.
T Consensus       160 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  236 (332)
T cd05614         160 KERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLT-GASPFTLEGERNTQSEVSRRIL--KCDPPFPSFIGP  236 (332)
T ss_pred             CCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhc-CCCCCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCH
Confidence            2223345689999999999865 47889999999999999999 999996432    223333332  233455667899


Q ss_pred             HHHHHHHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      .+.+++.+||+.||++||     +++++++|.+-
T Consensus       237 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~  270 (332)
T cd05614         237 EAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFF  270 (332)
T ss_pred             HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCc
Confidence            999999999999999999     78899888653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.97  E-value=1.1e-31  Score=224.96  Aligned_cols=178  Identities=28%  Similarity=0.564  Sum_probs=141.5

Q ss_pred             CcccccchhHHHHHhcCC-----------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEP-----------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+.+...                       ...++.|++.|++|||++||+||||||+|  |+++.++.
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~N--ili~~~~~  162 (303)
T cd05088          85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN--ILVGENYV  162 (303)
T ss_pred             EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchhe--EEecCCCc
Confidence            457898888888766432                       12345678899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC
Q psy2787          58 SSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG  137 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~  137 (251)
                      +||+|||+++....  .........+..|+|||++.+..++.++||||||+++|||++.|..||.+.+..+....+ ..+
T Consensus       163 ~kl~dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~  239 (303)
T cd05088         163 AKIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-PQG  239 (303)
T ss_pred             EEeCccccCcccch--hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH-hcC
Confidence            99999999864221  111222334567999999988888999999999999999997689999887776666655 334


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      .....+..++.++.+++.+||+.+|++||++.+++..+..+.....
T Consensus       240 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~  285 (303)
T cd05088         240 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  285 (303)
T ss_pred             CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence            4445556688999999999999999999999999999987755543

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-31  Score=219.05  Aligned_cols=172  Identities=20%  Similarity=0.317  Sum_probs=139.4

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||++.+++.+.+...       ...++.+++.||.|||+.+|+||||+|+|  |+++.++.++|+|||+++.......
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~n--ilv~~~~~~~l~dfg~~~~~~~~~~  159 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGAN--ILRDSAGNVKLGDFGASKRLQTICS  159 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCCEEEeecccceecccccc
Confidence            56888888887765432       23456778899999999999999999999  9999999999999999876433211


Q ss_pred             eec--CCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          75 VMT--ERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        75 ~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      ...  ....++..|+|||++.+..++.++||||+|+++||+++ |..||.+.........+.........+..++..+.+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (263)
T cd06625         160 SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT-EKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARN  238 (263)
T ss_pred             ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHh-CCCCccccchHHHHHHHhccCCCCCCCccCCHHHHH
Confidence            111  23456778999999998889999999999999999999 999998776655555554555556667788999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+||..+|++|||+.+++++.+
T Consensus       239 li~~~l~~~p~~Rpt~~~ll~~~~  262 (263)
T cd06625         239 FLRRTFVENAKKRPSAEELLRHFF  262 (263)
T ss_pred             HHHHHhhcCcccCCCHHHHhhCCC
Confidence            999999999999999999998753

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.97  E-value=4.6e-31  Score=228.86  Aligned_cols=154  Identities=27%  Similarity=0.524  Sum_probs=128.7

Q ss_pred             chhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchhH
Q psy2787          24 PPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASD  102 (251)
Q Consensus        24 ~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  102 (251)
                      .|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++..... .........++..|+|||++.+..++.++|
T Consensus       246 ~qi~~aL~~LH~~~ivHrdlkp~N--iLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  323 (401)
T cd05107         246 YQVANGMEFLASKNCVHRDLAARN--VLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSD  323 (401)
T ss_pred             HHHHHHHHHHhcCCcCcccCCcce--EEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhH
Confidence            478899999999999999999999  99999999999999999864322 111223345677899999999888999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         103 AWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       103 i~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      |||||+++|||++.|..||......+........+.+++.+..++.++.+++.+||..+|.+||++++|++.|+.+.
T Consensus       324 vwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         324 VWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            99999999999986889998766555544444566666777788999999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.97  E-value=3.4e-32  Score=230.23  Aligned_cols=164  Identities=16%  Similarity=0.179  Sum_probs=135.3

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|...+....       ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~N--ili~~~~~~kl~DfG~a~~~~~~~  150 (325)
T cd05602          73 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPEN--ILLDSQGHIVLTDFGLCKENIEHN  150 (325)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH--eEECCCCCEEEccCCCCcccccCC
Confidence            4689999999988664322       2356788999999999999999999999  999999999999999997532221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......||+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+....+...  ....++.++..+.++
T Consensus       151 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~l  226 (325)
T cd05602         151 G-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY-GLPPFYSRNTAEMYDNILNK--PLQLKPNITNSARHL  226 (325)
T ss_pred             C-CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhc-CCCCCCCCCHHHHHHHHHhC--CcCCCCCCCHHHHHH
Confidence            1 2234568899999999999889999999999999999999 99999988877777776543  233445788999999


Q ss_pred             HHHHhccCCCCCCCHHH
Q psy2787         154 MRQCWSKNPAERPKFST  170 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~  170 (251)
                      +.+||+.+|.+|+++.+
T Consensus       227 i~~~l~~~p~~R~~~~~  243 (325)
T cd05602         227 LEGLLQKDRTKRLGAKD  243 (325)
T ss_pred             HHHHcccCHHHCCCCCC
Confidence            99999999999998764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.97  E-value=1.9e-32  Score=231.75  Aligned_cols=171  Identities=16%  Similarity=0.214  Sum_probs=140.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|...+...       ...++.|++.||+|||+ +||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        72 lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~N--Ill~~~~~~kL~Dfg~~~~~~~~  149 (325)
T cd05594          72 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN--LMLDKDGHIKITDFGLCKEGIKD  149 (325)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCe--EEECCCCCEEEecCCCCeecCCC
Confidence            468999999998765432       22345688899999997 799999999999  99999999999999998753222


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .. ......||..|+|||++.+..++.++|||||||++|+|++ |..||.+.+.......+...  ....+..+++++.+
T Consensus       150 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~  225 (325)
T cd05594         150 GA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELILME--EIRFPRTLSPEAKS  225 (325)
T ss_pred             Cc-ccccccCCcccCCHHHHccCCCCCccccccccceeeeecc-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHH
Confidence            11 1233468899999999998889999999999999999999 99999988777776666433  33455678999999


Q ss_pred             HHHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      ++.+||+.||++|+     ++.++++|.+.
T Consensus       226 li~~~L~~dP~~R~~~~~~~~~~il~h~~~  255 (325)
T cd05594         226 LLSGLLKKDPKQRLGGGPDDAKEIMQHKFF  255 (325)
T ss_pred             HHHHHhhcCHHHhCCCCCCCHHHHhcCCCc
Confidence            99999999999996     89999988653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.97  E-value=3.5e-31  Score=215.52  Aligned_cols=173  Identities=27%  Similarity=0.547  Sum_probs=140.6

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+......        ..++.+++.||.|+|+++++||||||+|  |+++.++.+||+|||++......
T Consensus        69 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~n--ili~~~~~~~l~d~g~~~~~~~~  146 (250)
T cd05085          69 IVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARN--CLVGENNVLKISDFGMSRQEDDG  146 (250)
T ss_pred             EEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChhe--EEEcCCCeEEECCCccceecccc
Confidence            3578999999888664321        2345667789999999999999999999  99999999999999999764433


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........++..|+|||++.+..++.++||||||+++|++++.|..||.+.........+ ..+.+...+..++..+.+
T Consensus       147 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  225 (250)
T cd05085         147 IYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQV-EKGYRMSCPQKCPDDVYK  225 (250)
T ss_pred             ccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHH
Confidence            3222233344667999999998889999999999999999998789999887766666655 345555666778999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+||..+|++||++.++++.|.
T Consensus       226 li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         226 VMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHcccCcccCCCHHHHHHHhc
Confidence            999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.6e-32  Score=234.36  Aligned_cols=173  Identities=16%  Similarity=0.206  Sum_probs=141.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        78 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~N--Ill~~~~~~kL~Dfg~~~~~~~~~  155 (350)
T cd05573          78 LVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDN--ILIDADGHIKLADFGLCKKMNKAK  155 (350)
T ss_pred             EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH--eEECCCCCEEeecCCCCccCcccC
Confidence            468999988888866532       22356788899999999999999999999  999999999999999998644332


Q ss_pred             ----------------------------eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Q psy2787          74 ----------------------------YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN  125 (251)
Q Consensus        74 ----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~  125 (251)
                                                  ........||+.|+|||++.+..++.++|||||||++|||++ |..||.+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~Pf~~~~  234 (350)
T cd05573         156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLY-GFPPFYSDT  234 (350)
T ss_pred             cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhcc-CCCCCCCCC
Confidence                                        112334568899999999999899999999999999999999 999999888


Q ss_pred             hhHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-HHHHHHHHHh
Q psy2787         126 GMQILQKIDRE--GERLPRPEACPVEVYALMRQCWSKNPAERPK-FSTLKDCLYR  177 (251)
Q Consensus       126 ~~~~~~~i~~~--~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps-~~~il~~l~~  177 (251)
                      ..+....+...  ....+....+++++.+++.+|+. +|.+|++ +.++++|.+.
T Consensus       235 ~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~  288 (350)
T cd05573         235 LQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFF  288 (350)
T ss_pred             HHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCc
Confidence            77777766552  22333334469999999999997 9999999 9999998654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.97  E-value=1.3e-32  Score=233.13  Aligned_cols=173  Identities=13%  Similarity=0.134  Sum_probs=139.5

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...        ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++......
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~N--Ill~~~~~~kL~Dfg~a~~~~~~  155 (330)
T cd05601          78 LVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPEN--VLIDRTGHIKLADFGSAARLTAN  155 (330)
T ss_pred             EEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHh--eEECCCCCEEeccCCCCeECCCC
Confidence            468999999888866432        12345688899999999999999999999  99999999999999999875544


Q ss_pred             ceeecCCCCcCcccCCCcccC------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC--CCCC
Q psy2787          73 CYVMTERKPLPCPWCPMESLK------HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL--PRPE  144 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~  144 (251)
                      .........+|+.|+|||++.      ...++.++|||||||++|||++ |..||.+.........+.......  +...
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  234 (330)
T cd05601         156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIY-GRSPFHEGTSAKTYNNIMNFQRFLKFPEDP  234 (330)
T ss_pred             CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeecc-CCCCCCCCCHHHHHHHHHcCCCccCCCCCC
Confidence            333334456888999999986      4457789999999999999999 999998877766666665433222  3334


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .++.++.+++.+|+. +|++||++.+++.|-+-
T Consensus       235 ~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~  266 (330)
T cd05601         235 KVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFF  266 (330)
T ss_pred             CCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCc
Confidence            678999999999998 99999999999988653

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.97  E-value=6.9e-32  Score=227.74  Aligned_cols=171  Identities=18%  Similarity=0.234  Sum_probs=139.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.......       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~N--ill~~~~~~kl~Dfg~~~~~~~~~  150 (318)
T cd05570          73 FVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDN--VLLDSEGHIKIADFGMCKEGILGG  150 (318)
T ss_pred             EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHH--eEECCCCcEEecccCCCeecCcCC
Confidence            468999999988765433       12346678899999999999999999999  999999999999999987522211


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......++..|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+....+...  ....+..++.++.++
T Consensus       151 ~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~-G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~l  226 (318)
T cd05570         151 V-TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLA-GQSPFEGDDEDELFQSILED--EVRYPRWLSKEAKSI  226 (318)
T ss_pred             C-cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcC--CCCCCCcCCHHHHHH
Confidence            1 1233457889999999999899999999999999999999 99999988877777766443  334456789999999


Q ss_pred             HHHHhccCCCCCCCH-----HHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKF-----STLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~-----~~il~~l~~  177 (251)
                      +.+||..||++||++     .+++.+-+.
T Consensus       227 i~~~l~~dP~~R~s~~~~~~~~ll~~~~~  255 (318)
T cd05570         227 LKSFLTKNPEKRLGCLPTGEQDIKGHPFF  255 (318)
T ss_pred             HHHHccCCHHHcCCCCCCCHHHHhcCCCc
Confidence            999999999999999     888887543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.97  E-value=3.2e-31  Score=216.46  Aligned_cols=173  Identities=31%  Similarity=0.592  Sum_probs=144.4

Q ss_pred             CcccccchhHHHHHhcCC----------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCC
Q psy2787           1 MSANFAELNAFQENYTEP----------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFG   64 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~----------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFG   64 (251)
                      +.+||++.++|.+.....                ...++.+++.||+|||+++|+|+||+|+|  |+++.++.+||+|||
T Consensus        73 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~n--ili~~~~~~~l~dfg  150 (262)
T cd00192          73 LVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARN--CLVGEDLVVKISDFG  150 (262)
T ss_pred             EEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcce--EEECCCCcEEEcccc
Confidence            357888888888876543                12456677899999999999999999999  999999999999999


Q ss_pred             CCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC
Q psy2787          65 MMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP  143 (251)
Q Consensus        65 la~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  143 (251)
                      .+....... ........++..|+|||.+....++.++||||+|+++|+|++.|..||.+....++...+. .+.....+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~  229 (262)
T cd00192         151 LSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR-KGYRLPKP  229 (262)
T ss_pred             cccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCC
Confidence            998754332 2233445667789999999888899999999999999999995699999888777777764 45566677


Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       144 ~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ..++.++.+++.+||..+|++|||+.+++++|+
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         230 EYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            788999999999999999999999999998873

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.97  E-value=8.9e-32  Score=236.31  Aligned_cols=151  Identities=15%  Similarity=0.139  Sum_probs=119.2

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-CCCc
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFSQ   99 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~   99 (251)
                      ++.|++.||+|||+++|+||||||+|  |+++.++ .+||+|||+|+......  ......+|+.|+|||++.+. .++.
T Consensus       175 ~~~qi~~gL~yLH~~~IiHrDLKp~N--ILl~~~~~~vkL~DFGla~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~  250 (440)
T PTZ00036        175 YSYQLCRALAYIHSKFICHRDLKPQN--LLIDPNTHTLKLCDFGSAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTT  250 (440)
T ss_pred             HHHHHHHHHHHHHHCCEecCCcCHHH--EEEcCCCCceeeeccccchhccCCC--CcccCCCCcCccCHHHhcCCCCCCc
Confidence            45688999999999999999999999  9998665 79999999998754322  12234668889999998754 6899


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC---------------------------CCCCCCCcHHHHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER---------------------------LPRPEACPVEVYA  152 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~---------------------------~~~~~~~~~~~~~  152 (251)
                      ++||||+||++|||++ |.+||.+....+....+......                           ...+...+.++.+
T Consensus       251 ~~DiwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~  329 (440)
T PTZ00036        251 HIDLWSLGCIIAEMIL-GYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAIN  329 (440)
T ss_pred             HHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHH
Confidence            9999999999999999 99999887665444433221000                           0123356789999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      |+.+||..||.+|||+.+++.|.+.
T Consensus       330 li~~~L~~dP~~R~ta~e~l~hp~f  354 (440)
T PTZ00036        330 FISQFLKYEPLKRLNPIEALADPFF  354 (440)
T ss_pred             HHHHHCCCChhHCcCHHHHhCChhH
Confidence            9999999999999999999998663

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=1.3e-31  Score=227.47  Aligned_cols=173  Identities=17%  Similarity=0.188  Sum_probs=129.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||+. ++|.+.+...       ...++.|+++||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        81 lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N--Ill~~~~~~kL~Dfg~~~~~~~~~  157 (338)
T cd07859          81 VVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKN--ILANADCKLKICDFGLARVAFNDT  157 (338)
T ss_pred             EEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--eEECCCCcEEEccCcccccccccc
Confidence            3567875 5666654322       23456788999999999999999999999  999999999999999998643221


Q ss_pred             --eeecCCCCcCcccCCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh--------------
Q psy2787          74 --YVMTERKPLPCPWCPMESLKH--NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR--------------  135 (251)
Q Consensus        74 --~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~--------------  135 (251)
                        ........++..|+|||++.+  ..++.++|||||||++|+|++ |+.||.+.+.......+..              
T Consensus       158 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~  236 (338)
T cd07859         158 PTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKNVVHQLDLITDLLGTPSPETISRVR  236 (338)
T ss_pred             CccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhh
Confidence              112234568889999999875  568899999999999999999 9999987654332211110              


Q ss_pred             ------------cCCCCCC---CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         136 ------------EGERLPR---PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       136 ------------~~~~~~~---~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                  .....+.   .+.+++.+.+++.+||+.||++|||+.++++|-+-
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f  293 (338)
T cd07859         237 NEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYF  293 (338)
T ss_pred             hhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchh
Confidence                        0000000   13467789999999999999999999999998654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.97  E-value=6.3e-32  Score=232.54  Aligned_cols=174  Identities=16%  Similarity=0.192  Sum_probs=139.4

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.+...      ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.......
T Consensus       120 lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~N--Ill~~~~~ikL~DfG~a~~~~~~~~  197 (371)
T cd05622         120 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN--MLLDKSGHLKLADFGTCMKMNKEGM  197 (371)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH--EEECCCCCEEEEeCCceeEcCcCCc
Confidence            468999999888766432      23356678899999999999999999999  9999999999999999987554333


Q ss_pred             eecCCCCcCcccCCCcccCCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC--CCCCCCcH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQ----FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL--PRPEACPV  148 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~----~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~  148 (251)
                      .......||+.|+|||++.+..    ++.++||||+||++|||++ |..||.+.+.......+.......  +....++.
T Consensus       198 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  276 (371)
T cd05622         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV-GDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISK  276 (371)
T ss_pred             ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCH
Confidence            3334567899999999987542    7889999999999999999 999999888777777776544333  33346899


Q ss_pred             HHHHHHHHHhccCCCC--CCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAE--RPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~--Rps~~~il~~l~~  177 (251)
                      .+.+++.+|+..++.+  |+++.++++|.+.
T Consensus       277 ~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~  307 (371)
T cd05622         277 EAKNLICAFLTDREVRLGRNGVEEIKRHLFF  307 (371)
T ss_pred             HHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence            9999999999844433  7899999998764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.97  E-value=7.4e-32  Score=228.00  Aligned_cols=170  Identities=16%  Similarity=0.222  Sum_probs=138.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|...+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~N--Ill~~~~~~kl~Dfg~~~~~~~~~  150 (323)
T cd05575          73 FVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPEN--ILLDSQGHVVLTDFGLCKEGIEHS  150 (323)
T ss_pred             EEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHH--eEECCCCcEEEeccCCCcccccCC
Confidence            468999999998765432       12356788999999999999999999999  999999999999999987532211


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||..|+|||++.+..++.++|||||||++|||++ |..||.+.+..++...+...  ....++..+..+.++
T Consensus       151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~l  226 (323)
T cd05575         151 -KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLY-GLPPFYSRDTAEMYDNILNK--PLRLKPNISVSARHL  226 (323)
T ss_pred             -CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence             12234568889999999999889999999999999999999 99999988877777776543  233455679999999


Q ss_pred             HHHHhccCCCCCCCHH----HHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFS----TLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~----~il~~l~  176 (251)
                      +.+||+.||++||++.    ++++|.+
T Consensus       227 i~~~l~~~p~~R~~~~~~~~~il~~~~  253 (323)
T cd05575         227 LEGLLQKDRTKRLGAKDDFLEIKNHVF  253 (323)
T ss_pred             HHHHhhcCHHhCCCCCCCHHHHHcCCC
Confidence            9999999999999874    6665543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.97  E-value=7.8e-31  Score=213.80  Aligned_cols=173  Identities=29%  Similarity=0.587  Sum_probs=137.6

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||+..++|.+.+....        ...+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++......
T Consensus        70 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~n--il~~~~~~~kl~dfg~~~~~~~~  147 (252)
T cd05084          70 IVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARN--CLVTEKNVLKISDFGMSREEEDG  147 (252)
T ss_pred             EEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchhe--EEEcCCCcEEECccccCcccccc
Confidence            3578998888887764321        2345677899999999999999999999  99999999999999998764432


Q ss_pred             ceeec-CCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CYVMT-ERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..... .....+..|+|||.+.+..++.++||||||+++||+++.|..||...........+. .....+.+..++..+.
T Consensus       148 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  226 (252)
T cd05084         148 VYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-QGVRLPCPELCPDAVY  226 (252)
T ss_pred             cccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH-cCCCCCCcccCCHHHH
Confidence            21111 122334569999999988899999999999999999976889998777666555553 4445566677899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +++.+||..+|++|||+.++++.|.
T Consensus       227 ~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         227 RLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHh
Confidence            9999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.97  E-value=7.2e-31  Score=222.93  Aligned_cols=177  Identities=27%  Similarity=0.558  Sum_probs=143.3

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+++....                       ..++.|++.||+|||++||+||||||+|  |+++.++.
T Consensus        95 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N--ill~~~~~  172 (334)
T cd05100          95 VLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARN--VLVTEDNV  172 (334)
T ss_pred             EEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccce--EEEcCCCc
Confidence            3578888888887664321                       0134588899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+++....... .......++..|+|||++.+..++.++||||||+++|||++.|..||.+.+..+....+. .
T Consensus       173 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~  251 (334)
T cd05100         173 MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK-E  251 (334)
T ss_pred             EEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-c
Confidence            99999999986543221 122223445679999999988899999999999999999986889999888777776663 4


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +.....+..++.++.+++.+||+.+|++|||+.++++.|..+..
T Consensus       252 ~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~  295 (334)
T cd05100         252 GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT  295 (334)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence            45555667788999999999999999999999999999987764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.97  E-value=4e-31  Score=219.75  Aligned_cols=174  Identities=27%  Similarity=0.596  Sum_probs=140.4

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEE
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLIL   51 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il   51 (251)
                      +.+||++.++|.+++....                             ...+.+++.||+|||.++++||||||+|  |+
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n--il  162 (288)
T cd05050          85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN--CL  162 (288)
T ss_pred             EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh--eE
Confidence            3578888888887765321                             2366778899999999999999999999  99


Q ss_pred             EccCCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHH
Q psy2787          52 FFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQIL  130 (251)
Q Consensus        52 ~~~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~  130 (251)
                      ++.++.+||+|||+++...... .........+..|+|||++.+..++.++|||||||++|||++.|..||.+....+..
T Consensus       163 ~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~  242 (288)
T cd05050         163 VGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVI  242 (288)
T ss_pred             ecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            9999999999999987643222 112223344667999999988889999999999999999997688899888777777


Q ss_pred             HHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         131 QKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       131 ~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ..+. .+...+.+..++.++.+++.+||..+|++|||+.++++.|++
T Consensus       243 ~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         243 YYVR-DGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHh-cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            6664 444445566788999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG0580|consensus

Probab=99.97  E-value=3e-31  Score=205.19  Aligned_cols=170  Identities=15%  Similarity=0.228  Sum_probs=149.7

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.|+++..+.+.         ...++.|++.||.|+|.++||||||||+|  +|++..+.+|++|||-+.....
T Consensus        99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpen--lLlg~~~~lkiAdfGwsV~~p~  176 (281)
T KOG0580|consen   99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPEN--LLLGSAGELKIADFGWSVHAPS  176 (281)
T ss_pred             EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHH--hccCCCCCeeccCCCceeecCC
Confidence            468999999999866522         23567888999999999999999999999  9999999999999999876443


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .   ...+.+||..|.+||...+...+..+|+|++|++.||++. |.+||.+.+..+.+++|...  ....|..++.++.
T Consensus       177 ~---kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflv-g~ppFes~~~~etYkrI~k~--~~~~p~~is~~a~  250 (281)
T KOG0580|consen  177 N---KRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLV-GLPPFESQSHSETYKRIRKV--DLKFPSTISGGAA  250 (281)
T ss_pred             C---CceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHh-cCCchhhhhhHHHHHHHHHc--cccCCcccChhHH
Confidence            2   4566789999999999999999999999999999999999 99999999988899998654  4445588999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++|.+|+..+|.+|.+..++++|.|-.
T Consensus       251 dlI~~ll~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  251 DLISRLLVKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             HHHHHHhccCccccccHHHHhhhHHHH
Confidence            999999999999999999999998754

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.97  E-value=2.7e-31  Score=221.04  Aligned_cols=170  Identities=15%  Similarity=0.163  Sum_probs=129.2

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++ +++.+.+...        ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        80 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~N--il~~~~~~~kl~DfG~~~~~~~~  156 (288)
T cd07871          80 LVFEYLD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQN--LLINEKGELKLADFGLARAKSVP  156 (288)
T ss_pred             EEEeCCC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH--EEECCCCCEEECcCcceeeccCC
Confidence            3578887 4666654321        22346788999999999999999999999  99999999999999999764322


Q ss_pred             ceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER------------  139 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~------------  139 (251)
                      .. ......++..|+|||++.+ ..++.++||||+||++|+|++ |..||.+.+..+....+......            
T Consensus       157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (288)
T cd07871         157 TK-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMAT-GRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSN  234 (288)
T ss_pred             Cc-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccc
Confidence            11 2233467888999998865 468899999999999999999 99999887665544433221000            


Q ss_pred             -------CC---------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         140 -------LP---------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       140 -------~~---------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                             .+         ..+.++.++.+++.+|+..||.+|||++++++|-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp  286 (288)
T cd07871         235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS  286 (288)
T ss_pred             hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCC
Confidence                   00         0134677899999999999999999999999874

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.97  E-value=3.9e-32  Score=233.73  Aligned_cols=174  Identities=14%  Similarity=0.154  Sum_probs=140.6

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.+...      ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++........
T Consensus       120 lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~N--ILl~~~~~~kL~DFG~a~~~~~~~~  197 (370)
T cd05621         120 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDN--MLLDKHGHLKLADFGTCMKMDETGM  197 (370)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH--EEECCCCCEEEEecccceecccCCc
Confidence            468999999998876532      23356688899999999999999999999  9999999999999999987644333


Q ss_pred             eecCCCCcCcccCCCcccCCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQ----FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~----~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      .......||+.|+|||++.+..    ++.++||||+||++|+|++ |..||.+.+.......+.........+  ..++.
T Consensus       198 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~  276 (370)
T cd05621         198 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLV-GDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISK  276 (370)
T ss_pred             eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCH
Confidence            3344567899999999987543    7789999999999999999 999999888777777776544444433  35688


Q ss_pred             HHHHHHHHHhccCCCC--CCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAE--RPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~--Rps~~~il~~l~~  177 (251)
                      .+.+++..|+..++.+  |+++.++++|.+-
T Consensus       277 ~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~  307 (370)
T cd05621         277 HAKNLICAFLTDREVRLGRNGVEEIKQHPFF  307 (370)
T ss_pred             HHHHHHHHHccCchhccCCCCHHHHhcCccc
Confidence            9999999999855543  8899999998664

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.97  E-value=6.8e-31  Score=216.02  Aligned_cols=175  Identities=29%  Similarity=0.584  Sum_probs=140.2

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|...+...        ...++.+++.|++|||+.+|+||||||+|  |+++.++.+|++|||++......
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~N--ili~~~~~~kl~dfg~~~~~~~~  160 (268)
T cd05063          83 IITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARN--ILVNSNLECKVSDFGLSRVLEDD  160 (268)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhh--EEEcCCCcEEECCCccceecccc
Confidence            357888888887765432        13355677799999999999999999999  99999999999999999864332


Q ss_pred             cee--ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 CYV--MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ...  .......+..|+|||++.+..++.++||||||+++||+++.|..||...+..+....+. .+...+.+..++.++
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~  239 (268)
T cd05063         161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIN-DGFRLPAPMDCPSAV  239 (268)
T ss_pred             cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh-cCCCCCCCCCCCHHH
Confidence            211  11122334579999999888889999999999999999876999998877767666664 445555666789999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+++.+||..+|++||++.++++.|.++
T Consensus       240 ~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         240 YQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=4.7e-31  Score=216.09  Aligned_cols=174  Identities=28%  Similarity=0.573  Sum_probs=142.2

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ...+.+++.|++|||+++|+|+||||+|  |+++.++.+|++|||++.....
T Consensus        78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~n--ili~~~~~~~l~d~g~~~~~~~  155 (261)
T cd05034          78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARN--ILVGENLVCKIADFGLARLIED  155 (261)
T ss_pred             EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchhe--EEEcCCCCEEECccccceeccc
Confidence            3578888888888765432         2355677799999999999999999999  9999999999999999887543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ...........+..|+|||.+.+..++.++|+||+|+++|++++.|+.||.+.........+. .+...+.+...+.++.
T Consensus       156 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  234 (261)
T cd05034         156 DEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVE-RGYRMPRPPNCPEELY  234 (261)
T ss_pred             hhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHH
Confidence            322222233345679999999988899999999999999999987899998877776666663 4455566677899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||..+|++||++.++.+.|+.
T Consensus       235 ~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         235 DLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHcccCcccCCCHHHHHHHHhc
Confidence            99999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.97  E-value=1.2e-31  Score=230.16  Aligned_cols=173  Identities=13%  Similarity=0.160  Sum_probs=136.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        78 lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~N--ILi~~~~~vkL~DFGla~~~~~~~  155 (363)
T cd05628          78 LIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDN--LLLDSKGHVKLSDFGLCTGLKKAH  155 (363)
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHH--eEECCCCCEEEeeccCcccccccc
Confidence            468999999998876432       23456788899999999999999999999  999999999999999987532210


Q ss_pred             e----------------------------------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCC
Q psy2787          74 Y----------------------------------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE  119 (251)
Q Consensus        74 ~----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~  119 (251)
                      .                                  .......||+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~-G~~  234 (363)
T cd05628         156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI-GYP  234 (363)
T ss_pred             cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHh-CCC
Confidence            0                                  00123468999999999998889999999999999999999 999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHhc--cCCCCCCCHHHHHHHHH
Q psy2787         120 PWVGLNGMQILQKIDREGERLPRP--EACPVEVYALMRQCWS--KNPAERPKFSTLKDCLY  176 (251)
Q Consensus       120 pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl~--~dP~~Rps~~~il~~l~  176 (251)
                      ||.+.+..+....+.........+  ..++.++.+++.+++.  .++..||++.++++|-+
T Consensus       235 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~  295 (363)
T cd05628         235 PFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPF  295 (363)
T ss_pred             CCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCC
Confidence            999888877777776543333333  3478899999988554  23345689999999854

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.97  E-value=9.5e-31  Score=215.53  Aligned_cols=171  Identities=17%  Similarity=0.244  Sum_probs=134.7

Q ss_pred             CcccccchhHHHHHhcCCCCC---------CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPCRK---------PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~---------~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||+..++|.+.+......         ++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++.....
T Consensus        86 iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~n--ili~~~~~~~l~Dfg~~~~~~~  163 (272)
T cd06637          86 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN--VLLTENAEVKLVDFGVSAQLDR  163 (272)
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHH--EEECCCCCEEEccCCCceeccc
Confidence            357899888888876643322         45578899999999999999999999  9999999999999999886433


Q ss_pred             CceeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q psy2787          72 DCYVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEAC  146 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  146 (251)
                      .. .......++..|+|||++.     +..++.++||||+||++|||++ |..||...........+.....+...+..+
T Consensus       164 ~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06637         164 TV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE-GAPPLCDMHPMRALFLIPRNPAPRLKSKKW  241 (272)
T ss_pred             cc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh-CCCCccccCHHHHHHHHhcCCCCCCCCCCc
Confidence            21 1233456788899999986     3357889999999999999999 999997765544444443333333344568


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +.++.+++.+||..+|.+|||+.++++|-
T Consensus       242 ~~~~~~li~~~l~~~p~~Rpt~~~il~~~  270 (272)
T cd06637         242 SKKFQSFIESCLVKNHSQRPTTEQLMKHP  270 (272)
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhhCC
Confidence            88999999999999999999999998864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.97  E-value=2e-30  Score=212.53  Aligned_cols=174  Identities=26%  Similarity=0.569  Sum_probs=141.9

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ...+.+++.||+|||+.+++||||||+|  |+++.++.+||+|||++.....
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~n--i~i~~~~~~~l~d~~~~~~~~~  154 (260)
T cd05073          77 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN--ILVSASLVCKIADFGLARVIED  154 (260)
T ss_pred             EEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcce--EEEcCCCcEEECCCcceeeccC
Confidence            3578998888888765421         2244578899999999999999999999  9999999999999999986544


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||++....++.++|+||||+++|+++++|..||.+.+.......+. .+...+.+...+.++.
T Consensus       155 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  233 (260)
T cd05073         155 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMPRPENCPEELY  233 (260)
T ss_pred             CCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-CCCCCCCcccCCHHHH
Confidence            333233334456779999999988889999999999999999986899998877666666553 4445555677889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||..+|++||++.++++.|..
T Consensus       234 ~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         234 NIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHcccCcccCcCHHHHHHHHhc
Confidence            99999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.97  E-value=7.6e-31  Score=216.54  Aligned_cols=174  Identities=27%  Similarity=0.529  Sum_probs=141.5

Q ss_pred             CcccccchhHHHHHhcCCC----------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCC
Q psy2787           1 MSANFAELNAFQENYTEPC----------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFG   64 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFG   64 (251)
                      |.+||++.++|.+.+....                ..++.+++.||+|||+++|+||||||+|  |+++.++.++++|||
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~N--ili~~~~~~~l~~~~  162 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARN--CLVSSQREVKVSLLS  162 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccce--EEEeCCCcEEEcccc
Confidence            4578998888887665332                2345678899999999999999999999  999999999999999


Q ss_pred             CCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q psy2787          65 MMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE  144 (251)
Q Consensus        65 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  144 (251)
                      ++...............++..|+|||.+.+...+.++||||||+++|++++.|..||.+.........+.......+.+.
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  242 (275)
T cd05046         163 LSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPE  242 (275)
T ss_pred             cccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCC
Confidence            98764333332333445667799999998888889999999999999999867889988777776666654444445566


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .++..+.+++.+||..+|++|||+.+++..|+
T Consensus       243 ~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         243 GCPSRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             CCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            78999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.97  E-value=8e-31  Score=215.80  Aligned_cols=172  Identities=20%  Similarity=0.418  Sum_probs=132.1

Q ss_pred             CcccccchhHHHHHhcCCC------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPC------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      |.+||++.++|.+.+....            ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.
T Consensus        72 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N--ill~~~~~~kl~dfg~~~~  149 (269)
T cd05042          72 LVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRN--CQLTADLSVKIGDYGLALE  149 (269)
T ss_pred             EEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhh--eEecCCCcEEEeccccccc
Confidence            4689999999988764422            2345678899999999999999999999  9999999999999999876


Q ss_pred             cCCCc-eeecCCCCcCcccCCCcccCC-------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-C
Q psy2787          69 SQNDC-YVMTERKPLPCPWCPMESLKH-------NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-R  139 (251)
Q Consensus        69 ~~~~~-~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-~  139 (251)
                      ..... ........++..|+|||++..       ..++.++||||+||++|||++.|..||......+....+..... .
T Consensus       150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~  229 (269)
T cd05042         150 QYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIK  229 (269)
T ss_pred             cccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCcc
Confidence            33222 222334455677999998743       34678999999999999999867889987766665554433322 1


Q ss_pred             C---CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         140 L---PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       140 ~---~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      .   ..+..++..+.+++..|| .||++|||+++|++.|
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l  267 (269)
T cd05042         230 LPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL  267 (269)
T ss_pred             CCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence            1   223467888999999999 5999999999999876

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=4.7e-31  Score=218.79  Aligned_cols=175  Identities=26%  Similarity=0.470  Sum_probs=135.6

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      |.+||++.++|.+.....      ...++.+++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.......
T Consensus        85 lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~N--ili~~~~~~~l~dfg~~~~~~~~~~  162 (283)
T cd05080          85 LIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARN--VLLDNDRLVKIGDFGLAKAVPEGHE  162 (283)
T ss_pred             EEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChhe--EEEcCCCcEEEeecccccccCCcch
Confidence            467899999888865432      23456788899999999999999999999  9999999999999999987543221


Q ss_pred             --eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh--------------HHHHHHHhcCC
Q psy2787          75 --VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM--------------QILQKIDREGE  138 (251)
Q Consensus        75 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~--------------~~~~~i~~~~~  138 (251)
                        .......++..|+|||++.+..++.++||||||+++|||++ |..||......              .........+.
T Consensus       163 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (283)
T cd05080         163 YYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLT-HCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGM  241 (283)
T ss_pred             hhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHh-CCCCCCCCcchhhhhhcccccccchhhhhhhhhcCC
Confidence              11223345667999999988889999999999999999999 99998643211              00111112233


Q ss_pred             CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         139 RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ..+.+..++.++.+++.+||..+|++|||++++++.|+.+
T Consensus       242 ~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~  281 (283)
T cd05080         242 RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM  281 (283)
T ss_pred             CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence            4455667889999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.97  E-value=3.3e-31  Score=224.09  Aligned_cols=169  Identities=15%  Similarity=0.232  Sum_probs=138.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.....       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        78 lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~N--ill~~~~~ikL~Dfg~~~~~~~~~  155 (323)
T cd05615          78 FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDN--VMLDSEGHIKIADFGMCKEHMVDG  155 (323)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH--eEECCCCCEEEeccccccccCCCC
Confidence            468999999998765432       23456788899999999999999999999  999999999999999987633221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......||..|+|||++.+..++.++||||+||++|+|++ |..||.+.........+....  ...+..++.++.++
T Consensus       156 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ellt-G~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~l  231 (323)
T cd05615         156 V-TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLA-GQPPFDGEDEDELFQSIMEHN--VSYPKSLSKEAVSI  231 (323)
T ss_pred             c-cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHHH
Confidence            1 2234568889999999998889999999999999999999 999999988777777775443  34456788999999


Q ss_pred             HHHHhccCCCCCCCH-----HHHHHHH
Q psy2787         154 MRQCWSKNPAERPKF-----STLKDCL  175 (251)
Q Consensus       154 i~~cl~~dP~~Rps~-----~~il~~l  175 (251)
                      +.+||+.+|++|++.     .++++|.
T Consensus       232 i~~~l~~~p~~R~~~~~~~~~~i~~h~  258 (323)
T cd05615         232 CKGLMTKHPSKRLGCGPEGERDIREHA  258 (323)
T ss_pred             HHHHcccCHhhCCCCCCCCHHHHhcCc
Confidence            999999999999974     5565553

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.97  E-value=5.9e-31  Score=216.40  Aligned_cols=173  Identities=28%  Similarity=0.577  Sum_probs=138.1

Q ss_pred             CcccccchhHHHHHhcCCC--------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-----ceEEc
Q psy2787           1 MSANFAELNAFQENYTEPC--------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-----SSSSG   61 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-----~~kl~   61 (251)
                      +.+||.+.++|.+++....              ...+.+++.||+|||+++++|+||||+|  |+++.++     .+|++
T Consensus        76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~n--il~~~~~~~~~~~~~l~  153 (269)
T cd05044          76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARN--CLVSEKGYDADRVVKIG  153 (269)
T ss_pred             EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChhe--EEEecCCCCCCcceEEC
Confidence            3578888888887664311              1244577899999999999999999999  8888877     89999


Q ss_pred             cCCCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC
Q psy2787          62 DFGMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL  140 (251)
Q Consensus        62 DFGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~  140 (251)
                      |||+++....... .......++..|+|||++.+..++.++||||||+++|+|++.|..||...+..+....+. .+...
T Consensus       154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~  232 (269)
T cd05044         154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-AGGRL  232 (269)
T ss_pred             CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-cCCcc
Confidence            9999976433221 122233456789999999988899999999999999999976899998877766666553 44455


Q ss_pred             CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         141 PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       141 ~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ..+..++..+.+++.+||..+|++||++.++++.|.
T Consensus       233 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         233 QKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             CCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            566778999999999999999999999999998875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.3e-30  Score=212.93  Aligned_cols=170  Identities=25%  Similarity=0.576  Sum_probs=139.7

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ...+.|++.||.|||+++|+|+||||+|  |+++.++.+||+|||.++....
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~N--ili~~~~~~~l~d~g~~~~~~~  154 (256)
T cd05039          77 IVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARN--VLVSEDLVAKVSDFGLAKEASQ  154 (256)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccce--EEEeCCCCEEEccccccccccc
Confidence            3578888888887664322         2456778899999999999999999999  9999999999999999987533


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..    .....+..|+|||++....++.++|+||||+++|++++.|..||...+..++...+. .+.....+..+++++.
T Consensus       155 ~~----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  229 (256)
T cd05039         155 GQ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVE-KGYRMEAPEGCPPEVY  229 (256)
T ss_pred             cc----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-cCCCCCCccCCCHHHH
Confidence            21    123345679999999888899999999999999999976999998887766666553 4445555667899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||..+|++|||+.++++.|..
T Consensus       230 ~li~~~l~~~p~~Rp~~~~l~~~l~~  255 (256)
T cd05039         230 KVMKDCWELDPAKRPTFKQLREQLAL  255 (256)
T ss_pred             HHHHHHhccChhhCcCHHHHHHHHhc
Confidence            99999999999999999999999865

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG4645|consensus

Probab=99.97  E-value=2.6e-32  Score=250.77  Aligned_cols=170  Identities=19%  Similarity=0.269  Sum_probs=142.7

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .||||..|+|.+..+..       .+.+..|++.|++|||++|||||||||.|  |+++.+|.+|++|||.|..+.+...
T Consensus      1312 FMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aN--I~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPAN--ILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred             HHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccc--eeeecCCcEEeecccceeEecCchh
Confidence            58999999999866543       23456678899999999999999999999  9999999999999999998665531


Q ss_pred             ---eecCCCCcCcccCCCcccCCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCCCCCCCc
Q psy2787          75 ---VMTERKPLPCPWCPMESLKHNQ---FSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        75 ---~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~  147 (251)
                         .......||+.|||||++.+..   ...+.||||+|||+.||+| |+.||...+. -.+..++ ..+..++.|+.++
T Consensus      1390 ~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~t-GkrPW~~~dne~aIMy~V-~~gh~Pq~P~~ls 1467 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMAT-GKRPWAELDNEWAIMYHV-AAGHKPQIPERLS 1467 (1509)
T ss_pred             cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeec-CCCchhhccchhHHHhHH-hccCCCCCchhhh
Confidence               1224568999999999998643   4578999999999999999 9999987654 3555565 4677888888999


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++..+++.+||..||+.|.++.+++++-
T Consensus      1468 ~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1468 SEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred             HhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence            9999999999999999999998888764

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.97  E-value=2.2e-31  Score=227.81  Aligned_cols=174  Identities=17%  Similarity=0.200  Sum_probs=133.2

Q ss_pred             CcccccchhHHHHHhc---CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeec
Q psy2787           1 MSANFAELNAFQENYT---EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMT   77 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~---~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~   77 (251)
                      +.+||++.++|.....   .....++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++...... ...
T Consensus       149 lv~e~~~~~~L~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~~~~kL~DfG~~~~~~~~~-~~~  225 (353)
T PLN00034        149 VLLEFMDGGSLEGTHIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSN--LLINSAKNVKIADFGVSRILAQTM-DPC  225 (353)
T ss_pred             EEEecCCCCcccccccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHH--EEEcCCCCEEEcccccceeccccc-ccc
Confidence            3578888888765322   1223567889999999999999999999999  999999999999999998754321 122


Q ss_pred             CCCCcCcccCCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH---HHHHHHhcCCCCCCCCCCcHH
Q psy2787          78 ERKPLPCPWCPMESLKH-----NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ---ILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        78 ~~~~~~~~y~aPE~~~~-----~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      ....|+..|+|||++..     ...+.++|||||||++|||++ |+.||......+   ....+ ........+..++.+
T Consensus       226 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~-g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  303 (353)
T PLN00034        226 NSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYL-GRFPFGVGRQGDWASLMCAI-CMSQPPEAPATASRE  303 (353)
T ss_pred             cccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHh-CCCCCCCCCCccHHHHHHHH-hccCCCCCCCccCHH
Confidence            34568889999998853     223568999999999999999 999997433222   22222 223344455678899


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +.+++.+||..||++|||+.++++|-+-..
T Consensus       304 l~~li~~~l~~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        304 FRHFISCCLQREPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCccccc
Confidence            999999999999999999999999876444

>KOG0032|consensus

Probab=99.97  E-value=2.5e-31  Score=226.89  Aligned_cols=171  Identities=12%  Similarity=0.181  Sum_probs=146.7

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC----CceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS----SSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~----~~~kl~DFGla~~~~   70 (251)
                      +.+|++..|+|.+.....      ....+.|++.|++|||+.||+||||||+|  +|+...    +.+|++|||++....
T Consensus       113 lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN--~L~~~~~~~~~~ik~~DFGla~~~~  190 (382)
T KOG0032|consen  113 LVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPEN--LLLASKDEGSGRIKLIDFGLAKFIK  190 (382)
T ss_pred             EEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHH--eeeccccCCCCcEEEeeCCCceEcc
Confidence            468999999999976654      33456778899999999999999999999  555332    479999999999876


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~  148 (251)
                      .  .......+||+.|+|||++....|+..+||||+|+++|.|++ |..||.+.+.......+.........  .+.++.
T Consensus       191 ~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~-G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~  267 (382)
T KOG0032|consen  191 P--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLS-GVPPFWGETEFEIFLAILRGDFDFTSEPWDDISE  267 (382)
T ss_pred             C--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhh-CCCCCcCCChhHHHHHHHcCCCCCCCCCccccCH
Confidence            6  234566789999999999999999999999999999999999 99999999988888888776655433  367899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+.+++..|+..||..|+|+.++++|.|
T Consensus       268 ~akd~i~~ll~~dp~~R~ta~~~L~HpW  295 (382)
T KOG0032|consen  268 SAKDFIRKLLEFDPRKRLTAAQALQHPW  295 (382)
T ss_pred             HHHHHHHHhcccCcccCCCHHHHhcCcc
Confidence            9999999999999999999999999977

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.97  E-value=1.6e-31  Score=225.81  Aligned_cols=169  Identities=17%  Similarity=0.212  Sum_probs=136.6

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|...+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~N--Ill~~~~~~kl~Dfg~~~~~~~~~  150 (321)
T cd05603          73 FVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPEN--ILLDSQGHVVLTDFGLCKEGVEPE  150 (321)
T ss_pred             EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHH--eEECCCCCEEEccCCCCccCCCCC
Confidence            468999999887765432       12346788899999999999999999999  999999999999999987532221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......+|..|+|||++.+..++.++|||||||++|||++ |..||.+.+..++...+...  ....+...+.++.++
T Consensus       151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~l  226 (321)
T cd05603         151 -ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLY-GLPPFYSRDVSQMYDNILHK--PLQLPGGKTVAACDL  226 (321)
T ss_pred             -CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhc-CCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHH
Confidence             12234567889999999998889999999999999999999 99999988877777776543  344556788899999


Q ss_pred             HHHHhccCCCCCCCHH----HHHHHH
Q psy2787         154 MRQCWSKNPAERPKFS----TLKDCL  175 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~----~il~~l  175 (251)
                      +.+||+.+|++|+++.    +++++.
T Consensus       227 i~~~l~~~p~~R~~~~~~~~~~~~~~  252 (321)
T cd05603         227 LVGLLHKDQRRRLGAKADFLEIKNHV  252 (321)
T ss_pred             HHHHccCCHhhcCCCCCCHHHHhCCC
Confidence            9999999999998764    555444

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.97  E-value=1.1e-30  Score=215.21  Aligned_cols=173  Identities=28%  Similarity=0.535  Sum_probs=138.1

Q ss_pred             ccccchhHHHHHhcCC-------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           3 ANFAELNAFQENYTEP-------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~-------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      .||...+++...+...             ..+++.+++.||+|||+++|+||||||+|  |+++.++.+|++|||+++..
T Consensus        86 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~n--ili~~~~~~kl~dfg~~~~~  163 (273)
T cd05074          86 LPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARN--CMLNENMTVCVADFGLSKKI  163 (273)
T ss_pred             EecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhh--EEEcCCCCEEECcccccccc
Confidence            4677777776543211             23456778899999999999999999999  99999999999999999875


Q ss_pred             CCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcH
Q psy2787          70 QNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        70 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      .... ........++..|++||.+.+..++.++||||||+++|+|++.|..||.+.+..+....+. .......+..++.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~  242 (273)
T cd05074         164 YSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLI-KGNRLKQPPDCLE  242 (273)
T ss_pred             cCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCH
Confidence            3322 2222333456679999999888889999999999999999987889998877766666654 3344445567889


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       243 ~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         243 DVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            999999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.97  E-value=1.8e-30  Score=213.76  Aligned_cols=173  Identities=17%  Similarity=0.379  Sum_probs=131.8

Q ss_pred             CcccccchhHHHHHhcCCC-----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      |.+||++.++|.+++....           ..++.|+++||+|||+++|+||||||+|  |+++.++.+||+|||++...
T Consensus        72 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~n--il~~~~~~~~l~Dfg~~~~~  149 (268)
T cd05086          72 LVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRN--CFLTSDLTVKVGDYGIGPSR  149 (268)
T ss_pred             EEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccce--EEEcCCccEEeccccccccc
Confidence            4689999999988665321           1345678899999999999999999999  99999999999999998652


Q ss_pred             CCC-ceeecCCCCcCcccCCCcccCC-------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-C-
Q psy2787          70 QND-CYVMTERKPLPCPWCPMESLKH-------NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-R-  139 (251)
Q Consensus        70 ~~~-~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-~-  139 (251)
                      ... .........++..|+|||++..       ..++.++||||||+++|||++.|..||......+....+..... . 
T Consensus       150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~  229 (268)
T cd05086         150 YKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKL  229 (268)
T ss_pred             CcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccccc
Confidence            221 1122234567788999998753       23567899999999999999856789987776666655433322 1 


Q ss_pred             --CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 --LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 --~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                        +..+...+..+.+++..|| .+|++||+++++++.|.
T Consensus       230 ~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         230 FKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             CCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence              2233457788999999999 67999999999988774

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.97  E-value=5.1e-31  Score=218.55  Aligned_cols=171  Identities=13%  Similarity=0.162  Sum_probs=133.3

Q ss_pred             CcccccchhHHHHHhcC-----------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTE-----------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-----------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      +.+||++.++|......           ....++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++...
T Consensus        70 lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--ili~~~~~~~l~dfg~~~~~  147 (280)
T cd05608          70 LVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPEN--VLLDNDGNVRISDLGLAVEL  147 (280)
T ss_pred             EEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEECCCCCEEEeeCccceec
Confidence            36899999888765421           112356778899999999999999999999  99999999999999999765


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh----HHHHHHHhcCCCCCCCCC
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM----QILQKIDREGERLPRPEA  145 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~  145 (251)
                      ..... ......++..|+|||++.+..++.++||||||+++|||++ |+.||......    .....+.  ......+..
T Consensus       148 ~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~  223 (280)
T cd05608         148 KDGQS-KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIA-ARGPFRARGEKVENKELKQRIL--NDSVTYPDK  223 (280)
T ss_pred             CCCCc-cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHh-CCCCCCCCCcchhHHHHHHhhc--ccCCCCccc
Confidence            43321 2233467889999999999899999999999999999999 99999765422    2222221  122344567


Q ss_pred             CcHHHHHHHHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         146 CPVEVYALMRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      ++..+.+++.+||+.||++||     +++++++|.+-
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~  260 (280)
T cd05608         224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLF  260 (280)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhh
Confidence            889999999999999999999     67888877543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=5.3e-32  Score=229.52  Aligned_cols=172  Identities=16%  Similarity=0.227  Sum_probs=137.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|...+...       ...++.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~N--ili~~~~~~kl~Dfg~a~~~~~~~  150 (330)
T cd05586          73 LVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPEN--ILLDATGHIALCDFGLSKANLTDN  150 (330)
T ss_pred             EEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHH--eEECCCCCEEEecCCcCcCCCCCC
Confidence            468999999998765432       23356788899999999999999999999  999999999999999987632221


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                       .......||..|+|||++.+. .++.++||||+||++|+|++ |..||.+.+..+....+.......+ ...++.++.+
T Consensus       151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~  227 (330)
T cd05586         151 -KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCC-GWSPFYAEDTQQMYRNIAFGKVRFP-KNVLSDEGRQ  227 (330)
T ss_pred             -CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEecc-CCCCCCCCCHHHHHHHHHcCCCCCC-CccCCHHHHH
Confidence             122345688899999998754 47899999999999999999 9999998887777777654433332 2357889999


Q ss_pred             HHHHHhccCCCCCC----CHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERP----KFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rp----s~~~il~~l~~  177 (251)
                      ++.+||..||++||    ++.++++|.+-
T Consensus       228 li~~~L~~~P~~R~~~~~~~~~ll~h~~~  256 (330)
T cd05586         228 FVKGLLNRNPQHRLGAHRDAVELKEHPFF  256 (330)
T ss_pred             HHHHHcCCCHHHCCCCCCCHHHHhcCccc
Confidence            99999999999998    67788777553

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.8e-30  Score=214.90  Aligned_cols=177  Identities=24%  Similarity=0.564  Sum_probs=144.4

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+......        ...+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        85 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~n--il~~~~~~~kL~dfg~~~~~~~~  162 (279)
T cd05057          85 LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARN--VLVKTPQHVKITDFGLAKLLDVD  162 (279)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcce--EEEcCCCeEEECCCcccccccCc
Confidence            3578888888888765422        3345677899999999999999999999  99999999999999999875432


Q ss_pred             ce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .. .......++..|+|||.+....++.++|+||||+++||+++.|..||.+....++...+. .+...+.+..++..+.
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  241 (279)
T cd05057         163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLE-KGERLPQPPICTIDVY  241 (279)
T ss_pred             ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh-CCCCCCCCCCCCHHHH
Confidence            21 112223345679999999888899999999999999999977999999888777776664 4555566677889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +++.+||..+|+.||++.++++.|..+..
T Consensus       242 ~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~  270 (279)
T cd05057         242 MVLVKCWMIDAESRPTFKELINEFSKMAR  270 (279)
T ss_pred             HHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            99999999999999999999999988743

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>KOG0659|consensus

Probab=99.97  E-value=1.2e-30  Score=204.69  Aligned_cols=155  Identities=18%  Similarity=0.214  Sum_probs=126.0

Q ss_pred             CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-CCC
Q psy2787          20 RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFS   98 (251)
Q Consensus        20 ~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~   98 (251)
                      +.++.++++|++|||++.|+||||||.|  +|++.+|.+||+|||+|+.+..+.... .....|.+|.|||.+.|. .|+
T Consensus       104 K~y~~m~LkGl~y~H~~~IlHRDlKPnN--LLis~~g~lKiADFGLAr~f~~p~~~~-~~~V~TRWYRAPELLfGsr~Yg  180 (318)
T KOG0659|consen  104 KSYMLMTLKGLAYCHSKWILHRDLKPNN--LLISSDGQLKIADFGLARFFGSPNRIQ-THQVVTRWYRAPELLFGSRQYG  180 (318)
T ss_pred             HHHHHHHHHHHHHHHhhhhhcccCCccc--eEEcCCCcEEeecccchhccCCCCccc-ccceeeeeccChHHhccchhcC
Confidence            4456677899999999999999999999  999999999999999999976554322 233678889999988764 589


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC--------------------CC------CCCCcHHHHH
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL--------------------PR------PEACPVEVYA  152 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~--------------------~~------~~~~~~~~~~  152 (251)
                      ...||||.|||+.|++. |.+-|+|.+..+.+..|...-..+                    |.      -+.++.++.+
T Consensus       181 ~~VDmWavGCI~AELll-r~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ld  259 (318)
T KOG0659|consen  181 TGVDMWAVGCIFAELLL-RVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALD  259 (318)
T ss_pred             CcchhhhHHHHHHHHHc-cCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHH
Confidence            99999999999999999 888889988777666664421110                    00      1346778899


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.++|..||.+|.++++++++-+..
T Consensus       260 Ll~~m~~ynP~~Rita~qaL~~~yf~  285 (318)
T KOG0659|consen  260 LLSKMLTYNPKKRITASQALKHPYFK  285 (318)
T ss_pred             HHHhhhccCchhcccHHHHhcchhhh
Confidence            99999999999999999999886544

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.97  E-value=4.7e-31  Score=226.18  Aligned_cols=170  Identities=15%  Similarity=0.181  Sum_probs=127.5

Q ss_pred             cccccchhHHHHHhcC-----CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           2 SANFAELNAFQENYTE-----PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~-----~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      .+||++.+ +......     ....++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......  .
T Consensus       104 v~e~~~~~-l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~N--Il~~~~~~~kl~Dfg~a~~~~~~~--~  178 (359)
T cd07876         104 VMELMDAN-LCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN--IVVKSDCTLKILDFGLARTACTNF--M  178 (359)
T ss_pred             EEeCCCcC-HHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH--EEECCCCCEEEecCCCccccccCc--c
Confidence            46776643 3332221     123467789999999999999999999999  999999999999999997643221  2


Q ss_pred             cCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh---------------------
Q psy2787          77 TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR---------------------  135 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~---------------------  135 (251)
                      .....+|..|+|||++.+..++.++||||+||++|+|++ |..||.+.+.......+..                     
T Consensus       179 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (359)
T cd07876         179 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVK-GSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYV  257 (359)
T ss_pred             CCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHH
Confidence            234567888999999999889999999999999999999 9999987654332222111                     


Q ss_pred             -cCCCCC------------------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         136 -EGERLP------------------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       136 -~~~~~~------------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                       .....+                  .....+.++.+++.+||..||++|||+.++++|.+-
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~  318 (359)
T cd07876         258 ENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI  318 (359)
T ss_pred             hhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchh
Confidence             000000                  011245678999999999999999999999998764

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.97  E-value=1.1e-30  Score=217.74  Aligned_cols=173  Identities=27%  Similarity=0.517  Sum_probs=134.5

Q ss_pred             cccccchhHHHHHhcCCC------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccC
Q psy2787           2 SANFAELNAFQENYTEPC------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDF   63 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DF   63 (251)
                      .+||...++|.+.+....                  ...+.+++.||+|||+++|+||||||+|  |+++.++.++|+||
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~N--ili~~~~~~~l~df  174 (296)
T cd05051          97 IMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRN--CLVGKNYTIKIADF  174 (296)
T ss_pred             EEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhc--eeecCCCceEEccc
Confidence            567777777776553321                  2345677899999999999999999999  99999999999999


Q ss_pred             CCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCChhHHHHHHHhc-----
Q psy2787          64 GMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT-FGAEPWVGLNGMQILQKIDRE-----  136 (251)
Q Consensus        64 Gla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~-~g~~pf~~~~~~~~~~~i~~~-----  136 (251)
                      |+++...... ........++..|+|||++.+..++.++||||||+++||+++ .|..||...+..+....+...     
T Consensus       175 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  254 (296)
T cd05051         175 GMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDG  254 (296)
T ss_pred             cceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccccc
Confidence            9998643322 222334556778999999988889999999999999999987 256788777666655554322     


Q ss_pred             -CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         137 -GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       137 -~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                       ....+.+..++.++.+++.+||+.||++|||+.++++.|.
T Consensus       255 ~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         255 RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence             1112334567889999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.97  E-value=7.7e-31  Score=224.52  Aligned_cols=170  Identities=14%  Similarity=0.133  Sum_probs=127.5

Q ss_pred             cccccchhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           2 SANFAELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      .+||++. ++.......     ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......  .
T Consensus       100 v~e~~~~-~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~N--ill~~~~~~kl~Dfg~~~~~~~~~--~  174 (355)
T cd07874         100 VMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN--IVVKSDCTLKILDFGLARTAGTSF--M  174 (355)
T ss_pred             Ehhhhcc-cHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHH--EEECCCCCEEEeeCcccccCCCcc--c
Confidence            4677664 343333221     22467788999999999999999999999  999999999999999998644321  2


Q ss_pred             cCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc--------------------
Q psy2787          77 TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE--------------------  136 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~--------------------  136 (251)
                      .....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...                    
T Consensus       175 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (355)
T cd07874         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV  253 (355)
T ss_pred             cCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHH
Confidence            234567888999999998889999999999999999999 99999876644332222110                    


Q ss_pred             --CCC------------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         137 --GER------------------LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       137 --~~~------------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                        ...                  ...+...+.++.+++.+||..||++|||+.++++|.+-
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~  314 (355)
T cd07874         254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYI  314 (355)
T ss_pred             hcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcch
Confidence              000                  00012235678999999999999999999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.97  E-value=4.1e-30  Score=209.85  Aligned_cols=169  Identities=27%  Similarity=0.599  Sum_probs=138.3

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||+..++|.+.+.....         ..+.|++.||.|||++|++||||||+|  |+++.++.+||+|||++.....
T Consensus        75 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~n--ili~~~~~~kl~Dfg~~~~~~~  152 (254)
T cd05083          75 IVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARN--ILVSEDGVAKVSDFGLARVGSM  152 (254)
T ss_pred             EEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcce--EEEcCCCcEEECCCccceeccc
Confidence            35789998898887654321         235577899999999999999999999  9999999999999999876432


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .    ......+..|+|||++.+..++.++|+||||+++|+|++.|..||.+....+....+. .+.+...+..++..+.
T Consensus       153 ~----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  227 (254)
T cd05083         153 G----VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE-KGYRMEPPEGCPADVY  227 (254)
T ss_pred             c----CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-CCCCCCCCCcCCHHHH
Confidence            2    1222335679999999888899999999999999999976899998887776666653 4455555667899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +++.+||..+|++||++.++++.|.
T Consensus       228 ~li~~~l~~~p~~Rp~~~~l~~~l~  252 (254)
T cd05083         228 VLMTSCWETEPKKRPSFHKLREKLE  252 (254)
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHc
Confidence            9999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.97  E-value=6.8e-31  Score=215.82  Aligned_cols=175  Identities=14%  Similarity=0.230  Sum_probs=135.3

Q ss_pred             CcccccchhHHHHHhcC-----------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTE-----------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-----------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+.+..           ....++.++++||+|||+++|+|+||||+|  |+++.++.++|+|||++...
T Consensus        79 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~n--il~~~~~~~~l~d~g~~~~~  156 (267)
T cd08228          79 IVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPAN--VFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHH--EEEcCCCCEEECccccceec
Confidence            35788888777664421           112345678899999999999999999999  99999999999999998875


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--hhHHHHHHHhcCCCCCCCCCCc
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN--GMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ..... ......++..|+|||.+.+..++.++|+||+|+++|||++ |..||....  .......+.....+...+...+
T Consensus       157 ~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd08228         157 SSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYS  234 (267)
T ss_pred             cchhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhc-CCCCCccccccHHHHHHHHhcCCCCCCChhhcC
Confidence            43321 1223457778999999988888999999999999999999 999996543  2344444432222222234577


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ..+.+++.+||..+|++||++.++++.+..+.
T Consensus       235 ~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         235 EKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            89999999999999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.97  E-value=1.5e-30  Score=212.55  Aligned_cols=170  Identities=18%  Similarity=0.271  Sum_probs=137.9

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.+++.+.+....         ...+.+++.|+++||++||+|+||||+|  |+++.++.++|+|||++.....
T Consensus        77 lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~n--il~~~~~~~~l~df~~~~~~~~  154 (257)
T cd08223          77 IVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQN--VFLTRTNIIKVGDLGIARVLEN  154 (257)
T ss_pred             EEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchh--EEEecCCcEEEecccceEEecc
Confidence            3578988888887665422         2455677899999999999999999999  9999999999999999987543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ... ......++..|+|||++.+..++.++|+||+|+++|++++ |..||.+.+.......+. .+..+..+...+.++.
T Consensus       155 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~-g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  231 (257)
T cd08223         155 QCD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMAT-LKHAFNAKDMNSLVYRII-EGKLPPMPKDYSPELG  231 (257)
T ss_pred             cCC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHH-hcCCCCCccccCHHHH
Confidence            221 2234457788999999998889999999999999999999 999998777655555543 3334445567889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +++.+||+.+|++||++.+++.+.
T Consensus       232 ~li~~~l~~~p~~Rp~~~~~l~~~  255 (257)
T cd08223         232 ELIATMLSKRPEKRPSVKSILRQP  255 (257)
T ss_pred             HHHHHHhccCcccCCCHHHHhcCC
Confidence            999999999999999999998763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.97  E-value=1.3e-30  Score=221.31  Aligned_cols=171  Identities=19%  Similarity=0.227  Sum_probs=131.1

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||+..++|.+.+....       ..++.+++.||.|||++ +|+||||||+|  |+++.++.+||+|||++......
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~N--ili~~~~~~kL~Dfg~~~~~~~~  157 (333)
T cd06650          80 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN--ILVNSRGEIKLCDFGVSGQLIDS  157 (333)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhh--EEEcCCCCEEEeeCCcchhhhhh
Confidence            4689999888888664321       24456778999999975 79999999999  99999999999999998764332


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHH------------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKID------------------  134 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~------------------  134 (251)
                         ......++..|+|||++.+..++.++|||||||++|+|++ |+.||......++...+.                  
T Consensus       158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (333)
T cd06650         158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAI-GRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP  233 (333)
T ss_pred             ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence               2233467888999999998889999999999999999999 999997654433221110                  


Q ss_pred             -------------------------hcCCCCCCC-CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         135 -------------------------REGERLPRP-EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       135 -------------------------~~~~~~~~~-~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                               .....+..+ ...+.++.+++.+||+.||++|||+.+++.|.+-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~  302 (333)
T cd06650         234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFI  302 (333)
T ss_pred             ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHH
Confidence                                     001111111 2356789999999999999999999999988654

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.97  E-value=1.9e-31  Score=226.09  Aligned_cols=170  Identities=16%  Similarity=0.228  Sum_probs=133.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|...+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~N--ili~~~~~~kL~DfG~~~~~~~~~  150 (329)
T cd05618          73 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN--VLLDSEGHIKLTDYGMCKEGLRPG  150 (329)
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH--EEECCCCCEEEeeCCccccccCCC
Confidence            468999999998765432       23356688899999999999999999999  999999999999999987532211


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---------ChhHHHHHHHhcCCCCCCCC
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL---------NGMQILQKIDREGERLPRPE  144 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~---------~~~~~~~~i~~~~~~~~~~~  144 (251)
                      . ......||..|+|||++.+..++.++|||||||++|+|++ |..||...         ....+...+..  .....|.
T Consensus       151 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~  226 (329)
T cd05618         151 D-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPR  226 (329)
T ss_pred             C-ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhh-CCCCCccCCCcCCcccccHHHHHHHHhc--CCCCCCC
Confidence            1 2234568889999999999889999999999999999999 99999521         11123333332  3344567


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCC------HHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPK------FSTLKDCLY  176 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps------~~~il~~l~  176 (251)
                      .++.++.+++.+||..||++|++      +.++++|.+
T Consensus       227 ~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~  264 (329)
T cd05618         227 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF  264 (329)
T ss_pred             CCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCC
Confidence            78899999999999999999998      468877754

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.97  E-value=3.1e-31  Score=229.07  Aligned_cols=174  Identities=14%  Similarity=0.142  Sum_probs=135.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||+.||+||||||+|  |+++.++.+||+|||+++......
T Consensus        78 lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~N--ili~~~~~~kL~DFGl~~~~~~~~  155 (381)
T cd05626          78 FVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDN--ILIDLDGHIKLTDFGLCTGFRWTH  155 (381)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHH--EEECCCCCEEEeeCcCCccccccc
Confidence            468999999998865432       23346688899999999999999999999  999999999999999976421000


Q ss_pred             ----------------------------------------------eeecCCCCcCcccCCCcccCCCCCCchhHHHHHH
Q psy2787          74 ----------------------------------------------YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG  107 (251)
Q Consensus        74 ----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G  107 (251)
                                                                    ........||..|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (381)
T cd05626         156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG  235 (381)
T ss_pred             ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence                                                          0001234689999999999988899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCcHHHHHHHHH--HhccCCCCCCCHHHHHHHHHh
Q psy2787         108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACPVEVYALMRQ--CWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       108 ~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~li~~--cl~~dP~~Rps~~~il~~l~~  177 (251)
                      |++|||++ |..||.+.+..+....+.........  ...+++++.+++.+  |+..++..|+++.+++.|.+-
T Consensus       236 ~il~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f  308 (381)
T cd05626         236 VILFEMLV-GQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFF  308 (381)
T ss_pred             hHHHHHHh-CCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCccc
Confidence            99999999 99999887766655555433333333  34578999999998  556666679999999998653

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.97  E-value=7.9e-31  Score=225.20  Aligned_cols=170  Identities=14%  Similarity=0.131  Sum_probs=129.8

Q ss_pred             cccccchhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           2 SANFAELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      .+||++. ++.......     ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......  .
T Consensus       107 v~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~~kL~DfG~a~~~~~~~--~  181 (364)
T cd07875         107 VMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN--IVVKSDCTLKILDFGLARTAGTSF--M  181 (364)
T ss_pred             EEeCCCC-CHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHH--EEECCCCcEEEEeCCCccccCCCC--c
Confidence            4677764 344433221     23467788999999999999999999999  999999999999999998654322  2


Q ss_pred             cCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-----------------
Q psy2787          77 TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-----------------  139 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-----------------  139 (251)
                      .....+|..|+|||++.+..++.++|||||||++|+|++ |..||.+.+..+....+...-..                 
T Consensus       182 ~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (364)
T cd07875         182 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV  260 (364)
T ss_pred             ccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHH
Confidence            233467888999999999889999999999999999999 99999887765554443221000                 


Q ss_pred             ---C--------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         140 ---L--------------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       140 ---~--------------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                         +                    ......+.++.+++.+|+..||++|||+.++++|.+-
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~  321 (364)
T cd07875         261 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI  321 (364)
T ss_pred             hhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence               0                    0001134578899999999999999999999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.97  E-value=3.1e-30  Score=210.61  Aligned_cols=172  Identities=26%  Similarity=0.538  Sum_probs=137.9

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||+..++|.+.+...        ....+.+++.|++|||+.+|+|+||||+|  |+++.++.+||+|||++......
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~n--i~i~~~~~~~l~d~g~~~~~~~~  153 (256)
T cd05112          76 LVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARN--CLVGENQVVKVSDFGMTRFVLDD  153 (256)
T ss_pred             EEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccce--EEEcCCCeEEECCCcceeecccC
Confidence            357888888887765432        12345567789999999999999999999  99999999999999998865443


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........++..|+|||++.+..++.++||||+|+++||+++.|..||......++...+. .+.....+...+..+.+
T Consensus       154 ~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  232 (256)
T cd05112         154 QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETIN-AGFRLYKPRLASQSVYE  232 (256)
T ss_pred             cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHh-CCCCCCCCCCCCHHHHH
Confidence            22222333456689999999988899999999999999999976899998877777766653 34444445667899999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.+||..+|++||++.++++.|
T Consensus       233 l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         233 LMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHcccChhhCCCHHHHHHhh
Confidence            99999999999999999999876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=3e-31  Score=227.73  Aligned_cols=173  Identities=14%  Similarity=0.176  Sum_probs=138.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++.......
T Consensus        78 lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~N--Il~~~~~~~kl~Dfg~~~~~~~~~  155 (364)
T cd05599          78 LIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDN--LLLDAKGHIKLSDFGLCTGLKKSH  155 (364)
T ss_pred             EEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHH--eEECCCCCEEEeecccceeccccc
Confidence            468999999998876432       23356688899999999999999999999  999999999999999987532110


Q ss_pred             e-------------------------------------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhC
Q psy2787          74 Y-------------------------------------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF  116 (251)
Q Consensus        74 ~-------------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~  116 (251)
                      .                                     .......||+.|+|||++.+..++.++|||||||++|||++ 
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~-  234 (364)
T cd05599         156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV-  234 (364)
T ss_pred             cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc-
Confidence            0                                     01112458999999999998889999999999999999999 


Q ss_pred             CCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHhccCCCCCCC---HHHHHHHHHh
Q psy2787         117 GAEPWVGLNGMQILQKIDREGERLPRP--EACPVEVYALMRQCWSKNPAERPK---FSTLKDCLYR  177 (251)
Q Consensus       117 g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~Rps---~~~il~~l~~  177 (251)
                      |..||.+.+..+....+.........+  ..+++++.+++.+|+. +|.+|++   +.+++.|.+-
T Consensus       235 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~  299 (364)
T cd05599         235 GYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF  299 (364)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCc
Confidence            999999888777776665444333333  3578899999999996 9999998   9999988654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.97  E-value=3.5e-31  Score=224.44  Aligned_cols=171  Identities=16%  Similarity=0.218  Sum_probs=134.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|...+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N--ili~~~~~~kL~Dfg~~~~~~~~~  150 (329)
T cd05588          73 FVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDN--VLLDAEGHIKLTDYGMCKEGIRPG  150 (329)
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH--eEECCCCCEEECcCccccccccCC
Confidence            468999999988765322       23456788899999999999999999999  999999999999999987522111


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--------h-hHHHHHHHhcCCCCCCCC
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN--------G-MQILQKIDREGERLPRPE  144 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~--------~-~~~~~~i~~~~~~~~~~~  144 (251)
                       .......||..|+|||++.+..++.++|+||+||++|+|++ |..||....        . ....+.+..  .....|.
T Consensus       151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~  226 (329)
T cd05588         151 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRSPFDIVGMSDNPDQNTEDYLFQVILE--KQIRIPR  226 (329)
T ss_pred             -CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHH-CCCCcccccccccccccchHHHHHHHHc--CCCCCCC
Confidence             12234568889999999999889999999999999999999 999996321        1 123333332  2344566


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCC------HHHHHHHHHh
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPK------FSTLKDCLYR  177 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps------~~~il~~l~~  177 (251)
                      .++.++.+++.+||..||++|++      +.++++|-+-
T Consensus       227 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~  265 (329)
T cd05588         227 SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFF  265 (329)
T ss_pred             CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCC
Confidence            78999999999999999999987      6788887554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.97  E-value=8.7e-31  Score=225.60  Aligned_cols=172  Identities=16%  Similarity=0.174  Sum_probs=130.6

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+. +++.+.....       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.......
T Consensus        82 v~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~N--ili~~~~~~kL~Dfg~a~~~~~~~~  158 (372)
T cd07853          82 VTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGN--LLVNSNCVLKICDFGLARVEEPDES  158 (372)
T ss_pred             Eeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHH--EEECCCCCEEeccccceeecccCcc
Confidence            456765 4555544322       22356788999999999999999999999  9999999999999999987543322


Q ss_pred             eecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh------------------
Q psy2787          75 VMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR------------------  135 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~------------------  135 (251)
                      .......++..|+|||++.+. .++.++||||+||++|||++ |+.||.+.+..+....+..                  
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~  237 (372)
T cd07853         159 KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLG-RRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGAR  237 (372)
T ss_pred             ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHc-CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHH
Confidence            223344577889999998764 47899999999999999999 9999988765544443321                  


Q ss_pred             -----cCCCC-------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         136 -----EGERL-------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       136 -----~~~~~-------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                           ....+       ......+.++.+++.+||..||++|||+.+++.|.+-
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~  291 (372)
T cd07853         238 AHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYL  291 (372)
T ss_pred             HHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhh
Confidence                 11111       1123467889999999999999999999999998764

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.97  E-value=5.7e-31  Score=227.52  Aligned_cols=172  Identities=14%  Similarity=0.162  Sum_probs=135.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.|+|.+.+...       ...++.|++.||+|||+++|+||||||+|  ||++.++.+||+|||++.......
T Consensus        78 lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~N--ILl~~~g~~kL~DFGla~~~~~~~  155 (382)
T cd05625          78 FVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDN--ILIDRDGHIKLTDFGLCTGFRWTH  155 (382)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEECCCCCEEEeECCCCccccccc
Confidence            468999999998876532       12346688899999999999999999999  999999999999999975321000


Q ss_pred             ----------------------------------------------eeecCCCCcCcccCCCcccCCCCCCchhHHHHHH
Q psy2787          74 ----------------------------------------------YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG  107 (251)
Q Consensus        74 ----------------------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G  107 (251)
                                                                    ........||+.|+|||++.+..++.++||||+|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG  235 (382)
T cd05625         156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG  235 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence                                                          0001234689999999999988899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCcHHHHHHHHHHhccCCCCCCC---HHHHHHHHH
Q psy2787         108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACPVEVYALMRQCWSKNPAERPK---FSTLKDCLY  176 (251)
Q Consensus       108 ~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~Rps---~~~il~~l~  176 (251)
                      |++|||++ |..||.+.+..+....+........  ....+++++.+++.+|+ .+|++|++   +.+++.|-+
T Consensus       236 vil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~  307 (382)
T cd05625         236 VILYEMLV-GQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPF  307 (382)
T ss_pred             HHHHHHHh-CCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCC
Confidence            99999999 9999998877666666544333333  33567889999998876 59999987   899888754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.4e-30  Score=215.91  Aligned_cols=174  Identities=27%  Similarity=0.492  Sum_probs=134.7

Q ss_pred             CcccccchhHHHHHhcCCC-------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEc
Q psy2787           1 MSANFAELNAFQENYTEPC-------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSG   61 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~   61 (251)
                      +.+||++.++|.+.+....                   ..++.+++.||+|||+++++||||||+|  |+++.++.+||+
T Consensus        94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~N--ill~~~~~~kl~  171 (295)
T cd05097          94 MITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRN--CLVGNHYTIKIA  171 (295)
T ss_pred             EEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhh--EEEcCCCcEEec
Confidence            4678999888887654211                   1246678899999999999999999999  999999999999


Q ss_pred             cCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCChhHHHHHHHh----
Q psy2787          62 DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT-FGAEPWVGLNGMQILQKIDR----  135 (251)
Q Consensus        62 DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~-~g~~pf~~~~~~~~~~~i~~----  135 (251)
                      |||++....... ........++..|+|||++.+..++.++||||||+++|+|++ .|..||...+..+....+..    
T Consensus       172 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~  251 (295)
T cd05097         172 DFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRN  251 (295)
T ss_pred             ccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhh
Confidence            999998643322 222333455678999999988889999999999999999987 25578877666555444321    


Q ss_pred             --cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         136 --EGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       136 --~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                        .......++.++..+.+++.+||+.+|++|||+.+|++.|.
T Consensus       252 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         252 QGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             ccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence              11112334567899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.97  E-value=1.4e-30  Score=217.53  Aligned_cols=174  Identities=28%  Similarity=0.525  Sum_probs=134.5

Q ss_pred             CcccccchhHHHHHhcCC------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEcc
Q psy2787           1 MSANFAELNAFQENYTEP------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGD   62 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~D   62 (251)
                      +.+||++.++|.++....                  ..+++.+++.||+|||++||+||||||+|  |+++.++.+||+|
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N--ili~~~~~~~l~d  173 (296)
T cd05095          96 MITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN--CLVGKNYTIKIAD  173 (296)
T ss_pred             EEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe--EEEcCCCCEEecc
Confidence            357888888887765432                  22345678899999999999999999999  9999999999999


Q ss_pred             CCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCChhHHHHHHHh-----
Q psy2787          63 FGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT-FGAEPWVGLNGMQILQKIDR-----  135 (251)
Q Consensus        63 FGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~-~g~~pf~~~~~~~~~~~i~~-----  135 (251)
                      ||+++...... ........++..|++||+..++.++.++|+|||||++|||++ .|..||...+..+.......     
T Consensus       174 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~  253 (296)
T cd05095         174 FGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQ  253 (296)
T ss_pred             CcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhc
Confidence            99998643322 122233344678999999888889999999999999999997 26688877665554433211     


Q ss_pred             -cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         136 -EGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       136 -~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                       .....+.+..++..+.+++.+||..||++||++.++.+.|.
T Consensus       254 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         254 GRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             cccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence             11223445678899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.97  E-value=8e-32  Score=227.29  Aligned_cols=169  Identities=20%  Similarity=0.265  Sum_probs=138.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+++...       +..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        75 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~kL~Dfg~~~~~~~~~  152 (318)
T cd05582          75 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPEN--ILLDEEGHIKLTDFGLSKESIDHE  152 (318)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH--eEECCCCcEEEeeccCCcccCCCC
Confidence            468999999998876432       23456788999999999999999999999  999999999999999998643321


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......|+..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+...  ....+..++.++.++
T Consensus       153 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~t-g~~p~~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~l  228 (318)
T cd05582         153 -KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GSLPFQGKDRKETMTMILKA--KLGMPQFLSPEAQSL  228 (318)
T ss_pred             -CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeecc-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHH
Confidence             12234568889999999998888999999999999999999 99999988777777666443  334556789999999


Q ss_pred             HHHHhccCCCCCCCH-----HHHHHHH
Q psy2787         154 MRQCWSKNPAERPKF-----STLKDCL  175 (251)
Q Consensus       154 i~~cl~~dP~~Rps~-----~~il~~l  175 (251)
                      +.+||+.||++||++     .+++.+.
T Consensus       229 i~~~l~~~P~~R~~a~~~~~~~~~~~~  255 (318)
T cd05582         229 LRALFKRNPANRLGAGPDGVEEIKRHP  255 (318)
T ss_pred             HHHHhhcCHhHcCCCCCCCHHHHhCCC
Confidence            999999999999994     5565553

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.97  E-value=2.4e-30  Score=212.83  Aligned_cols=175  Identities=27%  Similarity=0.547  Sum_probs=141.1

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ...+.+++.||+|||+++|+||||||+|  |+++.++.+|++|||+++.....
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~n--ili~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd05066          82 IVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN--ILVNSNLVCKVSDFGLSRVLEDD  159 (267)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhc--EEECCCCeEEeCCCCcccccccc
Confidence            3578998888887765321        2345677899999999999999999999  99999999999999999875433


Q ss_pred             ceee--cCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 CYVM--TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ....  .....++..|++||++.+..++.++|+||||+++||+++.|..||.+....+....+. .+.+.+.+..++..+
T Consensus       160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  238 (267)
T cd05066         160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE-EGYRLPAPMDCPAAL  238 (267)
T ss_pred             cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh-CCCcCCCCCCCCHHH
Confidence            2111  1222335679999999988899999999999999998865999998877766666664 445556666789999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+++.+||+.+|++||++.++++.|..+
T Consensus       239 ~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         239 HQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            9999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.97  E-value=3.9e-31  Score=224.01  Aligned_cols=170  Identities=16%  Similarity=0.213  Sum_probs=133.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.......       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~N--ili~~~~~~kl~Dfg~~~~~~~~~  150 (327)
T cd05617          73 LVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDN--VLLDADGHIKLTDYGMCKEGLGPG  150 (327)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH--EEEeCCCCEEEeccccceeccCCC
Confidence            468999999998765422       23456788899999999999999999999  999999999999999987532211


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------Chh-HHHHHHHhcCCCCCCCCCC
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL------NGM-QILQKIDREGERLPRPEAC  146 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~------~~~-~~~~~i~~~~~~~~~~~~~  146 (251)
                      . ......||..|+|||++.+..++.++|||||||++|||++ |..||...      ... .....+..  .....+..+
T Consensus       151 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~~  226 (327)
T cd05617         151 D-TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMA-GRSPFDIITDNPDMNTEDYLFQVILE--KPIRIPRFL  226 (327)
T ss_pred             C-ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHh-CCCCCCccCCCcccccHHHHHHHHHh--CCCCCCCCC
Confidence            1 2234568889999999999899999999999999999999 99999532      122 23333322  234456678


Q ss_pred             cHHHHHHHHHHhccCCCCCCCH------HHHHHHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKF------STLKDCLY  176 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~------~~il~~l~  176 (251)
                      +..+.+++.+||..||++|+++      .++++|.+
T Consensus       227 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~  262 (327)
T cd05617         227 SVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTF  262 (327)
T ss_pred             CHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCC
Confidence            8999999999999999999984      57777643

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.97  E-value=1.3e-30  Score=218.34  Aligned_cols=172  Identities=16%  Similarity=0.200  Sum_probs=125.8

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++ +++.+.+...        ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        80 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~N--ill~~~~~~kl~Dfg~~~~~~~~  156 (303)
T cd07869          80 LVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQN--LLISDTGELKLADFGLARAKSVP  156 (303)
T ss_pred             EEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEECCCCCEEECCCCcceeccCC
Confidence            3567875 4555544321        23456788899999999999999999999  99999999999999998764322


Q ss_pred             ceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh-HHHHHHHhc-CCC----------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM-QILQKIDRE-GER----------  139 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~-~~~~~i~~~-~~~----------  139 (251)
                      . .......++..|+|||++.+ ..++.++||||+||++|+|++ |..||.+.... +....+... +..          
T Consensus       157 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (303)
T cd07869         157 S-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQ-GVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS  234 (303)
T ss_pred             C-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence            1 12234567888999999865 457889999999999999999 99999875432 222222110 000          


Q ss_pred             --------C--CCC---------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         140 --------L--PRP---------EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       140 --------~--~~~---------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                              .  ..+         ...+..+.+++.+||..||++|||+.++++|-+-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f  291 (303)
T cd07869         235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYF  291 (303)
T ss_pred             ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccc
Confidence                    0  000         1234678899999999999999999999987654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.97  E-value=1.8e-30  Score=212.02  Aligned_cols=169  Identities=17%  Similarity=0.268  Sum_probs=137.8

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.+++.+......         ..++.+++.||.|||+++|+|+||||+|  |+++.++.++++|||++.....
T Consensus        75 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~n--ili~~~~~~~l~dfg~~~~~~~  152 (255)
T cd08219          75 IVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKN--IFLTQNGKVKLGDFGSARLLTS  152 (255)
T ss_pred             EEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcce--EEECCCCcEEEcccCcceeecc
Confidence            3578988888887654321         2346778899999999999999999999  9999999999999999976543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ... ......++..|+|||++.+..++.++|+||||+++|+|++ |..||...+.......+. .+...+.+..++..+.
T Consensus       153 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  229 (255)
T cd08219         153 PGA-YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCT-LKHPFQANSWKNLILKVC-QGSYKPLPSHYSYELR  229 (255)
T ss_pred             ccc-ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhh-ccCCCCCCCHHHHHHHHh-cCCCCCCCcccCHHHH
Confidence            321 1223457778999999998889999999999999999999 999998877666666653 3444455677889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      +++.+||+.||++||++.+++..
T Consensus       230 ~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         230 SLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHhCCcccCCCHHHHhhc
Confidence            99999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.97  E-value=2.9e-30  Score=210.63  Aligned_cols=168  Identities=18%  Similarity=0.260  Sum_probs=137.5

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||++.++|.+.+....         ...+.+++.||.|||+.+|+|+||||+|  |+++.++.+||+|||+++.....
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~n--ili~~~~~~~l~df~~~~~~~~~  154 (256)
T cd08529          77 VMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLN--LFLDAYDNVKIGDLGVAKLLSDN  154 (256)
T ss_pred             EEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcce--EEEeCCCCEEEcccccceeccCc
Confidence            578888888877654421         1345678899999999999999999999  99999999999999998875433


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .. ......++..|+|||++.+..++.++|+||||+++|+|++ |..||...+.......+. .+...+.+..++.++.+
T Consensus       155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  231 (256)
T cd08529         155 TN-FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCT-GKHPFDANNQGALILKII-RGVFPPVSQMYSQQLAQ  231 (256)
T ss_pred             cc-hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH-cCCCCCCccccCHHHHH
Confidence            21 2233456788999999998889999999999999999999 999998887666666654 34444555578899999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~  174 (251)
                      ++.+||+.+|++||++.+++++
T Consensus       232 ~i~~~l~~~p~~Rp~~~~ll~~  253 (256)
T cd08529         232 LIDQCLTKDYRQRPDTFQLLRN  253 (256)
T ss_pred             HHHHHccCCcccCcCHHHHhhC
Confidence            9999999999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.97  E-value=2e-30  Score=216.46  Aligned_cols=149  Identities=9%  Similarity=0.110  Sum_probs=119.5

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce------eecCCCCcCcccCCCcccCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY------VMTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~------~~~~~~~~~~~y~aPE~~~~   94 (251)
                      ..+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+|+.......      .......||+.|+|||++.+
T Consensus       130 ~i~~qi~~~l~~lH~~~iiHrDiKp~N--ill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~  207 (294)
T PHA02882        130 NIMKDMLTTLEYIHEHGISHGDIKPEN--IMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG  207 (294)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC
Confidence            467788999999999999999999999  9999999999999999987432211      11223468999999999999


Q ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHH--------HHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCC
Q psy2787          95 NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQIL--------QKIDREGERLPRPEACPVEVYALMRQCWSKNPAER  165 (251)
Q Consensus        95 ~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~--------~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R  165 (251)
                      ..++.++|||||||++|||++ |..||.+... ....        ..+....   .....++..+.+++..||..+|++|
T Consensus       208 ~~~~~~~DiwSlG~~l~el~~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~r  283 (294)
T PHA02882        208 ACVTRRGDLESLGYCMLKWAG-IKLPWKGFGHNGNLIHAAKCDFIKRLHEGK---IKIKNANKFIYDFIECVTKLSYEEK  283 (294)
T ss_pred             CCCCcHHHHHHHHHHHHHHHh-CCCCCCccccchHHHHHhHHHHHHHhhhhh---hccCCCCHHHHHHHHHHHhCCCCCC
Confidence            999999999999999999999 9999987632 2221        2221111   1224578899999999999999999


Q ss_pred             CCHHHHHHHH
Q psy2787         166 PKFSTLKDCL  175 (251)
Q Consensus       166 ps~~~il~~l  175 (251)
                      |++.++++.+
T Consensus       284 p~~~~l~~~~  293 (294)
T PHA02882        284 PDYDALIKIF  293 (294)
T ss_pred             CCHHHHHHhh
Confidence            9999998865

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.97  E-value=1.5e-31  Score=226.34  Aligned_cols=168  Identities=14%  Similarity=0.212  Sum_probs=136.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|...+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        73 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~N--Ill~~~~~~kL~DfG~~~~~~~~~  150 (325)
T cd05604          73 FVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPEN--ILLDSQGHVVLTDFGLCKEGIAQS  150 (325)
T ss_pred             EEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH--eEECCCCCEEEeecCCcccCCCCC
Confidence            468999999988765432       23457788999999999999999999999  999999999999999987532211


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......|+..|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+...  ....++..+..+.++
T Consensus       151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-G~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l  226 (325)
T cd05604         151 -DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLY-GLPPFYCRDVAEMYDNILHK--PLVLRPGASLTAWSI  226 (325)
T ss_pred             -CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhc-CCCCCCCCCHHHHHHHHHcC--CccCCCCCCHHHHHH
Confidence             12234568889999999999889999999999999999999 99999988877777776543  233345688899999


Q ss_pred             HHHHhccCCCCCCCHH----HHHHH
Q psy2787         154 MRQCWSKNPAERPKFS----TLKDC  174 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~----~il~~  174 (251)
                      +.+|+..+|.+||++.    ++++|
T Consensus       227 l~~ll~~~p~~R~~~~~~~~~i~~h  251 (325)
T cd05604         227 LEELLEKDRQRRLGAKEDFLEIQEH  251 (325)
T ss_pred             HHHHhccCHHhcCCCCCCHHHHhcC
Confidence            9999999999999875    55554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.97  E-value=7.3e-31  Score=217.26  Aligned_cols=167  Identities=13%  Similarity=0.159  Sum_probs=129.4

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|........         ..++.|++.||+|||+.||+||||||+|  |+++.++.+||+|||++.....
T Consensus        70 lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~N--ili~~~~~~~l~Dfg~~~~~~~  147 (277)
T cd05607          70 LVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPEN--VLLDDQGNCRLSDLGLAVELKD  147 (277)
T ss_pred             EEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHh--EEEcCCCCEEEeeceeeeecCC
Confidence            4689998888876553221         2345688899999999999999999999  9999999999999999887543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh----hHHHHHHHhcCCCCCCCCCCc
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG----MQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ..  ......++..|+|||++.+..++.++||||+||++|||++ |..||.+...    .++.......... .....++
T Consensus       148 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  223 (277)
T cd05607         148 GK--TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVA-GRTPFKDHKEKVAKEELKRRTLEDEVK-FEHQNFT  223 (277)
T ss_pred             Cc--eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHh-CCCCCCCCcchhhHHHHHHHhhccccc-cccccCC
Confidence            32  2233467888999999998889999999999999999999 9999976432    2233332222211 1224678


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKD  173 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~  173 (251)
                      .++.+++.+||+.||++||++.++++
T Consensus       224 ~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         224 EESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             HHHHHHHHHHhccCHhhCCCCccchh
Confidence            89999999999999999999966553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG4717|consensus

Probab=99.97  E-value=4.6e-31  Score=223.59  Aligned_cols=170  Identities=14%  Similarity=0.204  Sum_probs=147.3

Q ss_pred             CcccccchhHHHHHhc--------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYT--------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~--------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      ++.|+.+.|||.+++-        +-.++++.||..|+.|+|+..++||||||+| +|+..+-|.+||.|||++..+...
T Consensus        94 LiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPEN-VVFFEKlGlVKLTDFGFSNkf~PG  172 (864)
T KOG4717|consen   94 LILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPEN-VVFFEKLGLVKLTDFGFSNKFQPG  172 (864)
T ss_pred             EEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcce-eEEeeecCceEeeeccccccCCCc
Confidence            3678999999999752        2357899999999999999999999999999 455677789999999999876554


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFS-QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .  ...+.+|..+|-|||++.+..|+ +++||||+|+|||.+++ |+.||...+..+.+-.|+..++  ..|.+++.+++
T Consensus       173 ~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVC-Gq~PFqeANDSETLTmImDCKY--tvPshvS~eCr  247 (864)
T KOG4717|consen  173 K--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVC-GQPPFQEANDSETLTMIMDCKY--TVPSHVSKECR  247 (864)
T ss_pred             c--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHh-CCCccccccchhhhhhhhcccc--cCchhhhHHHH
Confidence            2  45677899999999999999887 68999999999999999 9999999988888888876644  45678999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +||..||..||.+|.+.++|..+-|
T Consensus       248 dLI~sMLvRdPkkRAslEeI~s~~W  272 (864)
T KOG4717|consen  248 DLIQSMLVRDPKKRASLEEIVSTSW  272 (864)
T ss_pred             HHHHHHHhcCchhhccHHHHhcccc
Confidence            9999999999999999999987654

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.97  E-value=2.1e-31  Score=226.10  Aligned_cols=173  Identities=16%  Similarity=0.189  Sum_probs=137.6

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.|+|.+.+...        ...++.|++.||+|||+.+|+||||||+|  |+++.++.+||+|||++......
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~N--ili~~~~~~kL~DfG~a~~~~~~  155 (332)
T cd05623          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDN--ILMDMNGHIRLADFGSCLKLMED  155 (332)
T ss_pred             EEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHH--EEECCCCCEEEeecchheecccC
Confidence            468999999998876532        22346688899999999999999999999  99999999999999999764433


Q ss_pred             ceeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC---C
Q psy2787          73 CYVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP---E  144 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~---~  144 (251)
                      .........||..|+|||++.     ...++.++|||||||++|||++ |+.||.+.+..+....+.....+.+.+   .
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  234 (332)
T cd05623         156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLY-GETPFYAESLVETYGKIMNHKERFQFPAQVT  234 (332)
T ss_pred             CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhc-CCCCCCCCCHHHHHHHHhCCCccccCCCccc
Confidence            322334457899999999986     3457889999999999999999 999999888777777776554443333   4


Q ss_pred             CCcHHHHHHHHHHhccCCCC--CCCHHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAE--RPKFSTLKDCLY  176 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~--Rps~~~il~~l~  176 (251)
                      .++.++.+++.+|+..++++  |+++.++++|-+
T Consensus       235 ~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~  268 (332)
T cd05623         235 DVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPF  268 (332)
T ss_pred             cCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCC
Confidence            57899999999988665444  689999999854

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.97  E-value=3.9e-30  Score=211.79  Aligned_cols=173  Identities=24%  Similarity=0.446  Sum_probs=130.4

Q ss_pred             CcccccchhHHHHHhcCCC------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPC------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      +.+||++.++|.+.+....            ..++.|+++||+|||+.+|+||||||+|  |+++.++.+||+|||+++.
T Consensus        72 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~n--il~~~~~~~kL~dfg~~~~  149 (269)
T cd05087          72 LVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRN--CLLTADLTVKIGDYGLSHN  149 (269)
T ss_pred             EEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcce--EEEcCCCcEEECCcccccc
Confidence            4679999999887664311            1345688899999999999999999999  9999999999999999976


Q ss_pred             cCCCce-eecCCCCcCcccCCCcccCCC-------CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-CCC
Q psy2787          69 SQNDCY-VMTERKPLPCPWCPMESLKHN-------QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GER  139 (251)
Q Consensus        69 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~-------~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~~~  139 (251)
                      ...... .......++..|+|||++.+.       .++.++|+||||+++|||++.|..||......+........ ...
T Consensus       150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  229 (269)
T cd05087         150 KYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLK  229 (269)
T ss_pred             ccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCC
Confidence            433322 222334567789999998642       35789999999999999995599999877665544332222 222


Q ss_pred             CCCC---CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 LPRP---EACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 ~~~~---~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+.+   ...+..+.+++.+|| .+|++|||+++|+..|.
T Consensus       230 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         230 LPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             CCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence            2222   346788999999999 68999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.97  E-value=2.2e-30  Score=215.15  Aligned_cols=168  Identities=16%  Similarity=0.143  Sum_probs=128.0

Q ss_pred             cccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||++. ++.+.....         ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        85 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~N--ili~~~~~~kl~dfg~~~~~~~~  161 (288)
T cd07863          85 VFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN--ILVTSGGQVKLADFGLARIYSCQ  161 (288)
T ss_pred             EEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEECCCCCEEECccCccccccCc
Confidence            4567663 454443321         23456788899999999999999999999  99999999999999999875432


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-----------C--
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-----------R--  139 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-----------~--  139 (251)
                      .  ......++..|+|||++.+..++.++||||+||++|+|++ |..||.+....+....+...-.           .  
T Consensus       162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (288)
T cd07863         162 M--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLP  238 (288)
T ss_pred             c--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHh-CCcCcCCCCHHHHHHHHHHHhCCCChhhCccccccc
Confidence            1  2233467888999999998889999999999999999999 9999987765544443322100           0  


Q ss_pred             ---C---------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         140 ---L---------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       140 ---~---------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                         .         ...+.++..+.+++.+|++.||++|||+.+++.|.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp  286 (288)
T cd07863         239 RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHP  286 (288)
T ss_pred             ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence               0         01134677889999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.97  E-value=5.3e-30  Score=208.66  Aligned_cols=172  Identities=26%  Similarity=0.558  Sum_probs=137.1

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||.+.++|.+......        ...+.+++.||+|||+++|+||||+|+|  |+++.++.+||+|||++.......
T Consensus        70 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~n--ili~~~~~~~l~d~g~~~~~~~~~  147 (251)
T cd05041          70 VMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARN--CLVGENNVLKISDFGMSREEEGGI  147 (251)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcce--EEEcCCCcEEEeeccccccccCCc
Confidence            467888888877654321        1234566789999999999999999999  999999999999999998654322


Q ss_pred             eeec-CCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMT-ERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .... .....+..|+|||.+.+..++.++|+||||+++|++++.|..||.+.........+. .....+.+..++.++.+
T Consensus       148 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  226 (251)
T cd05041         148 YTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE-SGYRMPAPQLCPEEIYR  226 (251)
T ss_pred             ceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHh-cCCCCCCCccCCHHHHH
Confidence            2222 223345679999999888899999999999999999986788998877666555553 44455566788999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+||..+|++|||+.++++.|.
T Consensus       227 li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         227 LMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHhccChhhCcCHHHHHHHhh
Confidence            999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0603|consensus

Probab=99.97  E-value=8.5e-31  Score=226.88  Aligned_cols=166  Identities=16%  Similarity=0.193  Sum_probs=138.1

Q ss_pred             CcccccchhHHHHHhcCCCC------CCCchhhHHhhhhhhCCcccCCCCCCCceEEE-ccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPCR------KPLPPERRGYGTFSVNNICSCQFSSSSLLILF-FSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~-~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +++|+...+.++++......      ..+.+++.|+.|||++||+||||||+|  ||+ +..++++|+|||.++..... 
T Consensus       393 ~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~N--IL~~~~~g~lrltyFG~a~~~~~~-  469 (612)
T KOG0603|consen  393 LVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGN--ILLDGSAGHLRLTYFGFWSELERS-  469 (612)
T ss_pred             eeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhh--eeecCCCCcEEEEEechhhhCchh-
Confidence            35777888888876543221      245677899999999999999999999  999 68899999999999876554 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh-HHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM-QILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                         ..+.+.|..|+|||++....++.++|+||||++||+|++ |+.||...... ++..++.    ..+....++.++++
T Consensus       470 ---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~-G~tp~~~~P~~~ei~~~i~----~~~~s~~vS~~AKd  541 (612)
T KOG0603|consen  470 ---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLT-GRTLFAAHPAGIEIHTRIQ----MPKFSECVSDEAKD  541 (612)
T ss_pred             ---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHh-CCCccccCCchHHHHHhhc----CCccccccCHHHHH
Confidence               344567888999999999999999999999999999999 99999876655 5555553    23334789999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      |+++||+.||.+|+++.++..|-+.
T Consensus       542 Ll~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  542 LLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHHHhccCChhhCcChhhhccCcch
Confidence            9999999999999999999999887

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.97  E-value=3.4e-30  Score=212.11  Aligned_cols=174  Identities=26%  Similarity=0.551  Sum_probs=138.8

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.....        ....+.|++.||+|||++|++|+||||+|  |+++.++.+|++|||++.......
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~n--ili~~~~~~kl~dfg~~~~~~~~~  160 (269)
T cd05065          83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARN--ILVNSNLVCKVSDFGLSRFLEDDT  160 (269)
T ss_pred             EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChhe--EEEcCCCcEEECCCccccccccCc
Confidence            57888888887765432        12344677799999999999999999999  999999999999999987643322


Q ss_pred             ee--ecCCC--CcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          74 YV--MTERK--PLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        74 ~~--~~~~~--~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      ..  .....  ..+..|+|||++.+..++.++||||+|+++||+++.|..||.+....+....+. .....+.+..++..
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~  239 (269)
T cd05065         161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE-QDYRLPPPMDCPTA  239 (269)
T ss_pred             cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCcCCCcccCCHH
Confidence            11  11111  124579999999988899999999999999998866999998887777777663 44555666788999


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +.+++.+||..+|++||++.+++..|..+
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         240 LHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99999999999999999999999988654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.97  E-value=4.4e-30  Score=209.48  Aligned_cols=171  Identities=32%  Similarity=0.629  Sum_probs=139.7

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||.+.++|.+.+....         ..++.|++.||+|||+.+++|+||||+|  |+++.++.++|+|||++......
T Consensus        79 i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~n--il~~~~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       79 VMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARN--CLVGENLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             EEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccce--EEEccCCeEEEcccCCceecccc
Confidence            578888888877654322         3456778899999999999999999999  99999999999999999875544


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........++..|+|||.+.+..++.++|+||+|+++|+|++.|..||.+.+.....+.+. .......+..++.++.+
T Consensus       157 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  235 (258)
T smart00219      157 DYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLK-KGYRLPKPENCPPEIYK  235 (258)
T ss_pred             cccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCCCcCCHHHHH
Confidence            32222223467889999999888889999999999999999986889998877777777664 44455566678999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.+||..+|++|||+.++++.|
T Consensus       236 ~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      236 LMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHCcCChhhCcCHHHHHhhC
Confidence            99999999999999999998753

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=3.1e-30  Score=211.93  Aligned_cols=169  Identities=17%  Similarity=0.273  Sum_probs=135.4

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||++.++|.+.+...       ...++.+++.||+|||+++|+||||+|+|  |+++.++.+||+|||+++.......
T Consensus        84 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~n--il~~~~~~~~l~dfg~~~~~~~~~~  161 (267)
T cd06628          84 FLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGAN--ILVDNKGGIKISDFGISKKLEANSL  161 (267)
T ss_pred             EEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHH--EEEcCCCCEEecccCCCcccccccc
Confidence            57888888777765432       22456778899999999999999999999  9999999999999999987542211


Q ss_pred             e-----ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          75 V-----MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        75 ~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      .     ......++..|+|||++.+..++.++|+||+|+++|++++ |..||.+.........+. ....+..+..++..
T Consensus       162 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  239 (267)
T cd06628         162 STKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLT-GKHPFPDCTQLQAIFKIG-ENASPEIPSNISSE  239 (267)
T ss_pred             cCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhh-CCCCCCCccHHHHHHHHh-ccCCCcCCcccCHH
Confidence            1     1122356778999999998888999999999999999999 999998766554444432 34444556678999


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      +.+++.+||+.+|.+||++.+++++
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~il~~  264 (267)
T cd06628         240 AIDFLEKTFEIDHNKRPTAAELLKH  264 (267)
T ss_pred             HHHHHHHHccCCchhCcCHHHHhhC
Confidence            9999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG0594|consensus

Probab=99.97  E-value=1e-30  Score=213.12  Aligned_cols=154  Identities=20%  Similarity=0.207  Sum_probs=125.9

Q ss_pred             CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-CC
Q psy2787          19 CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QF   97 (251)
Q Consensus        19 ~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~   97 (251)
                      .+.++.|+++||+|||+++|+||||||+|  ++++++|.+||+|||+|+...-+. .......+|.+|.|||++.+. .|
T Consensus       122 ik~~m~Qll~gl~~~H~~~IlHRDLKPQN--lLi~~~G~lKlaDFGlAra~~ip~-~~yt~evvTlWYRaPEvLlGs~~Y  198 (323)
T KOG0594|consen  122 IKSFMRQLLRGLAFLHSHGILHRDLKPQN--LLISSSGVLKLADFGLARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSY  198 (323)
T ss_pred             HHHHHHHHHHHHHHHHhCCeecccCCcce--EEECCCCcEeeeccchHHHhcCCc-ccccccEEEeeccCHHHhcCCCcC
Confidence            45678899999999999999999999999  999999999999999999754332 134567788999999999886 68


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC----------------CC-----C-------CCCcHH
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL----------------PR-----P-------EACPVE  149 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~----------------~~-----~-------~~~~~~  149 (251)
                      +...||||+|||+.||++ ++.-|++.+..+...+|-+.-..+                +.     +       +...+.
T Consensus       199 s~~vDiWs~GcIfaEm~~-~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~  277 (323)
T KOG0594|consen  199 STSVDIWSLGCIFAEMFT-RRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPD  277 (323)
T ss_pred             CCCcchHhHHHHHHHHHh-CCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCcc
Confidence            999999999999999999 999999988877666664311000                00     0       122347


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ..+++.+|+..+|.+|.|+..++.|-.
T Consensus       278 ~~dll~~~L~y~p~~R~Sa~~al~h~y  304 (323)
T KOG0594|consen  278 GIELLSKLLQYDPAKRISAKGALTHPY  304 (323)
T ss_pred             HHHHHHHHhccCcccCcCHHHHhcChh
Confidence            889999999999999999999999843

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.8e-31  Score=229.06  Aligned_cols=173  Identities=17%  Similarity=0.164  Sum_probs=136.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+.+...       ...++.|++.||+|||+.||+||||||+|  |+++.++.+||+|||+++......
T Consensus        78 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~N--Ill~~~~~~kl~DfGla~~~~~~~  155 (377)
T cd05629          78 LIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDN--ILIDRGGHIKLSDFGLSTGFHKQH  155 (377)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH--EEECCCCCEEEeeccccccccccc
Confidence            468999999998876432       22356788899999999999999999999  999999999999999986321100


Q ss_pred             -------------e---------------------------------eecCCCCcCcccCCCcccCCCCCCchhHHHHHH
Q psy2787          74 -------------Y---------------------------------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFG  107 (251)
Q Consensus        74 -------------~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G  107 (251)
                                   .                                 .......||+.|+|||++.+..++.++||||||
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG  235 (377)
T cd05629         156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG  235 (377)
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence                         0                                 000124689999999999988899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHhccCCCCC---CCHHHHHHHHHh
Q psy2787         108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPVEVYALMRQCWSKNPAER---PKFSTLKDCLYR  177 (251)
Q Consensus       108 ~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~R---ps~~~il~~l~~  177 (251)
                      |++|||++ |..||.+....+.+..+.........+  ..++.++.+++.+|+. +|.+|   +++.+++.|.+-
T Consensus       236 vil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~  308 (377)
T cd05629         236 AIMFECLI-GWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFF  308 (377)
T ss_pred             hhhhhhhc-CCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCc
Confidence            99999999 999998887777666665433333333  3578999999999997 67765   599999998654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=8.5e-30  Score=211.30  Aligned_cols=175  Identities=26%  Similarity=0.492  Sum_probs=133.6

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||.+.++|.+.+....        ..++.+++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~n--ili~~~~~~~l~dfg~~~~~~~~  161 (284)
T cd05081          84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRN--ILVESENRVKIGDFGLTKVLPQD  161 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhh--EEECCCCeEEECCCcccccccCC
Confidence            3578998888888764322        2346778899999999999999999999  99999999999999999875332


Q ss_pred             ce--eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH---------------HHHHHHh
Q psy2787          73 CY--VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ---------------ILQKIDR  135 (251)
Q Consensus        73 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~---------------~~~~i~~  135 (251)
                      ..  .......++..|+|||++.+..++.++||||||+++|||++ |..++.......               -...+..
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05081         162 KEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-YSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK  240 (284)
T ss_pred             CcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhh-cCCcCCCcchhhhhhcccccccccchHHHHHHHh
Confidence            21  11222234456999999988889999999999999999999 776654322110               0111223


Q ss_pred             cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         136 EGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       136 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .....+.+..++.++.+++.+||+.+|++|||+.++++.|+.+
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         241 NNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            3445555677899999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.97  E-value=4.7e-31  Score=227.55  Aligned_cols=173  Identities=13%  Similarity=0.114  Sum_probs=136.1

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-   72 (251)
                      +.+||++.++|.+.+....       ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+|...... 
T Consensus        78 lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~N--ill~~~~~ikL~DFG~a~~~~~~~  155 (376)
T cd05598          78 FVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDN--ILIDRDGHIKLTDFGLCTGFRWTH  155 (376)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHH--EEECCCCCEEEEeCCCCccccccc
Confidence            4689999999998765322       2346788899999999999999999999  99999999999999997532100 


Q ss_pred             -----------------------------------------ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHH
Q psy2787          73 -----------------------------------------CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIW  111 (251)
Q Consensus        73 -----------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~  111 (251)
                                                               .........||+.|+|||++.+..++.++||||+||++|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily  235 (376)
T cd05598         156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY  235 (376)
T ss_pred             cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence                                                     000011346899999999999988999999999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCcHHHHHHHHHHhccCCCCCC---CHHHHHHHHHh
Q psy2787         112 EMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACPVEVYALMRQCWSKNPAERP---KFSTLKDCLYR  177 (251)
Q Consensus       112 el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~li~~cl~~dP~~Rp---s~~~il~~l~~  177 (251)
                      ||++ |..||.+....+....+........  ....++.++.+++.+|+ .+|.+|+   ++.+++.|.+.
T Consensus       236 ell~-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~  304 (376)
T cd05598         236 EMLV-GQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFF  304 (376)
T ss_pred             ehhh-CCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCc
Confidence            9999 9999998877666555543333332  23468889999999977 5999999   89999998553

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=5.4e-30  Score=209.79  Aligned_cols=164  Identities=21%  Similarity=0.373  Sum_probs=127.8

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc--------eEEccCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS--------SSSGDFG   64 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~--------~kl~DFG   64 (251)
                      |.+||++.++|...+....        ..++.|++.||+|||+++|+||||||+|  |+++.++.        +|++|||
T Consensus        76 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~n--ili~~~~~~~~~~~~~~~l~d~g  153 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKN--VLLIREEDRKTGNPPFIKLSDPG  153 (258)
T ss_pred             EEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce--EEEecccccccCCCceEEecccc
Confidence            4689999999988765432        2346788899999999999999999999  88877664        6999999


Q ss_pred             CCcccCCCceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCC-CCCCCCCChhHHHHHHHhcCCCCCC
Q psy2787          65 MMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFG-AEPWVGLNGMQILQKIDREGERLPR  142 (251)
Q Consensus        65 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g-~~pf~~~~~~~~~~~i~~~~~~~~~  142 (251)
                      ++......     ....++..|+|||++.+. .++.++||||||+++||+++ | ..||............ ..  +...
T Consensus       154 ~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~-g~~~~~~~~~~~~~~~~~-~~--~~~~  224 (258)
T cd05078         154 ISITVLPK-----EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFS-GGDKPLSALDSQKKLQFY-ED--RHQL  224 (258)
T ss_pred             cccccCCc-----hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHc-CCCCChhhccHHHHHHHH-Hc--cccC
Confidence            88754322     234566779999999864 47899999999999999999 7 5777665554433322 22  3334


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +...+.++.+++.+||+.+|++|||++++++.|
T Consensus       225 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         225 PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            455678999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0983|consensus

Probab=99.97  E-value=3.9e-30  Score=202.85  Aligned_cols=160  Identities=18%  Similarity=0.314  Sum_probs=127.7

Q ss_pred             HHHHhcCCC-----CCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCc
Q psy2787          11 FQENYTEPC-----RKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPC   84 (251)
Q Consensus        11 l~~~~~~~~-----~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~   84 (251)
                      |+.++.++.     .+....+.+||.||.. ++|||||+||+|  ||+|+.|++|+||||.+-++.++.  ..+...|-+
T Consensus       180 Llkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSN--ILlDe~GniKlCDFGIsGrlvdSk--AhtrsAGC~  255 (391)
T KOG0983|consen  180 LLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSN--ILLDERGNIKLCDFGISGRLVDSK--AHTRSAGCA  255 (391)
T ss_pred             HHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccc--eEEccCCCEEeecccccceeeccc--ccccccCCc
Confidence            444555443     3444556799999965 689999999999  999999999999999998866553  234456777


Q ss_pred             ccCCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCC-ChhHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHh
Q psy2787          85 PWCPMESLKH---NQFSQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQKIDREGERLPRP--EACPVEVYALMRQCW  158 (251)
Q Consensus        85 ~y~aPE~~~~---~~~~~~~Di~S~G~il~el~~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl  158 (251)
                      .|||||.+.-   ..|+..+||||||++++|+.| |+.||.+- ...+.+.++..... +..+  ..+++.+.+++..||
T Consensus       256 ~YMaPERidp~~~~kYDiRaDVWSlGITlveLaT-g~yPy~~c~tdFe~ltkvln~eP-P~L~~~~gFSp~F~~fv~~CL  333 (391)
T KOG0983|consen  256 AYMAPERIDPPDKPKYDIRADVWSLGITLVELAT-GQYPYKGCKTDFEVLTKVLNEEP-PLLPGHMGFSPDFQSFVKDCL  333 (391)
T ss_pred             cccCccccCCCCCCccchhhhhhhhccchhhhhc-ccCCCCCCCccHHHHHHHHhcCC-CCCCcccCcCHHHHHHHHHHh
Confidence            8999998863   458899999999999999999 99999884 45677777765433 3222  458999999999999


Q ss_pred             ccCCCCCCCHHHHHHHHH
Q psy2787         159 SKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       159 ~~dP~~Rps~~~il~~l~  176 (251)
                      .+|+.+||.+.++++|-.
T Consensus       334 ~kd~r~RP~Y~~Ll~h~F  351 (391)
T KOG0983|consen  334 TKDHRKRPKYNKLLEHPF  351 (391)
T ss_pred             hcCcccCcchHHHhcCcc
Confidence            999999999999998854

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.96  E-value=4.4e-31  Score=226.46  Aligned_cols=172  Identities=12%  Similarity=0.163  Sum_probs=136.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        78 lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~N--Ili~~~~~vkL~DfG~~~~~~~~~  155 (360)
T cd05627          78 LIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDN--LLLDAKGHVKLSDFGLCTGLKKAH  155 (360)
T ss_pred             EEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHH--EEECCCCCEEEeeccCCccccccc
Confidence            468999999998876432       22356788899999999999999999999  999999999999999987532110


Q ss_pred             e----------------------------------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCC
Q psy2787          74 Y----------------------------------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE  119 (251)
Q Consensus        74 ~----------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~  119 (251)
                      .                                  .......||+.|+|||++.+..++.++||||+||++|||++ |..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~t-G~~  234 (360)
T cd05627         156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLI-GYP  234 (360)
T ss_pred             ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeeccc-CCC
Confidence            0                                  01123468999999999999899999999999999999999 999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHhccCCCCCCC---HHHHHHHHH
Q psy2787         120 PWVGLNGMQILQKIDREGERLPRP--EACPVEVYALMRQCWSKNPAERPK---FSTLKDCLY  176 (251)
Q Consensus       120 pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~Rps---~~~il~~l~  176 (251)
                      ||.+.+..+....+.........+  ..++.++.+++.+|+. +|.+|++   +.++++|-+
T Consensus       235 Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~  295 (360)
T cd05627         235 PFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPF  295 (360)
T ss_pred             CCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCC
Confidence            999888777777765433333333  3478899999999774 9999984   788888765

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG4279|consensus

Probab=99.96  E-value=2.5e-31  Score=231.72  Aligned_cols=169  Identities=20%  Similarity=0.262  Sum_probs=138.4

Q ss_pred             cccccchhHHHHHhcC----------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc-cCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTE----------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF-SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~----------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~-~~~~~kl~DFGla~~~~   70 (251)
                      .||-.+.|+|-..+..          ....+..||+.||.|||++.|+|||||-+|  ||++ -+|.+||+|||.++.+.
T Consensus       650 FMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDN--VLvNTySGvlKISDFGTsKRLA  727 (1226)
T KOG4279|consen  650 FMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDN--VLVNTYSGVLKISDFGTSKRLA  727 (1226)
T ss_pred             EeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCc--EEEeeccceEEecccccchhhc
Confidence            4677777777664432          234567899999999999999999999999  8875 46899999999999854


Q ss_pred             CCceeecCCCCcCcccCCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCCCCCCCc
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHN--QFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      .- ...+.+..||..|||||++..+  .|+.++|||||||++.||.| |++||..... +....++-..+..+++|+.++
T Consensus       728 gi-nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMAT-GrPPF~ElgspqAAMFkVGmyKvHP~iPeels  805 (1226)
T KOG4279|consen  728 GI-NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMAT-GRPPFVELGSPQAAMFKVGMYKVHPPIPEELS  805 (1226)
T ss_pred             cC-CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeecc-CCCCeeecCChhHhhhhhcceecCCCCcHHHH
Confidence            32 1245678899999999999875  48899999999999999999 9999976543 333445555566788899999


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      .+++++|.+|+.+||.+||++.++++.
T Consensus       806 aeak~FilrcFepd~~~R~sA~~LL~D  832 (1226)
T KOG4279|consen  806 AEAKNFILRCFEPDPCDRPSAKDLLQD  832 (1226)
T ss_pred             HHHHHHHHHHcCCCcccCccHHHhccC
Confidence            999999999999999999999999874

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=8.3e-30  Score=209.31  Aligned_cols=165  Identities=18%  Similarity=0.244  Sum_probs=124.5

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc-------eEEccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS-------SSSGDFGM   65 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~-------~kl~DFGl   65 (251)
                      |.+||++.+.+.......        ...++.|++.||+|||+++|+||||||+|  |+++.++.       +|++|||+
T Consensus        81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N--ill~~~~~~~~~~~~~~l~d~g~  158 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKN--ILLAREGIDGECGPFIKLSDPGI  158 (262)
T ss_pred             EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCccc--EEEecCCccCCCCceeEeCCCCC
Confidence            457888877766544321        12456788999999999999999999999  88876654       89999999


Q ss_pred             CcccCCCceeecCCCCcCcccCCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q psy2787          66 MRYSQNDCYVMTERKPLPCPWCPMESLK-HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE  144 (251)
Q Consensus        66 a~~~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  144 (251)
                      +......     ....++..|+|||++. +..++.++|||||||++|||++.|..||.+....+..... ....  ....
T Consensus       159 ~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~-~~~~--~~~~  230 (262)
T cd05077         159 PITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFY-EGQC--MLVT  230 (262)
T ss_pred             CccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHH-hcCc--cCCC
Confidence            8754322     2345667799999987 4568899999999999999985488998776544433222 2221  2223


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ..+.++.+++.+||..||.+||++.+|++++
T Consensus       231 ~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         231 PSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             CChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            3467899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.96  E-value=6.3e-30  Score=211.95  Aligned_cols=172  Identities=20%  Similarity=0.267  Sum_probs=134.4

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.+++...+...        ...++.|++.||.|||+.||+||||||+|  |+++.++.+||+|||++.......
T Consensus        80 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~n--ili~~~~~~kl~dfg~~~~~~~~~  157 (282)
T cd06643          80 LIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGN--ILFTLDGDIKLADFGVSAKNTRTI  157 (282)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCccc--EEEccCCCEEEccccccccccccc
Confidence            57888888887654321        22356678899999999999999999999  999999999999999987643321


Q ss_pred             eeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~  147 (251)
                       .......++..|+|||++.     +..++.++|+||+||++|||++ |..||.+.+..+....+.... .....+..++
T Consensus       158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (282)
T cd06643         158 -QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQ-IEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS  235 (282)
T ss_pred             -cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHcc-CCCCccccCHHHHHHHHhhcCCCCCCCccccC
Confidence             1223346788899999984     3457789999999999999999 999998877655554443322 2233455688


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .++.+++.+||+.+|.+||++.+++++.+-
T Consensus       236 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  265 (282)
T cd06643         236 SEFKDFLKKCLEKNVDARWTTTQLLQHPFV  265 (282)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCCCE
Confidence            999999999999999999999999988653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=6e-30  Score=221.52  Aligned_cols=171  Identities=17%  Similarity=0.166  Sum_probs=123.7

Q ss_pred             ccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           3 ANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      +|+.. ++|..+....       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++........
T Consensus       162 ~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~N--Ill~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        162 LPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAEN--IFINHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             EecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHh--EEEcCCCCEEEEeCCccccccccccc
Confidence            45553 4555544322       23356788899999999999999999999  99999999999999999764332222


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-------hhHHHHHHHh-------------
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN-------GMQILQKIDR-------------  135 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~-------~~~~~~~i~~-------------  135 (251)
                      ......||+.|+|||++.+..++.++||||+||++|||++ |..||.+..       .......+..             
T Consensus       239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt-g~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~  317 (391)
T PHA03212        239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMAT-CHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA  317 (391)
T ss_pred             ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHH-CCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence            2334578999999999998889999999999999999999 988764321       0011111100             


Q ss_pred             -------------cCCCCC--CC-----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         136 -------------EGERLP--RP-----EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       136 -------------~~~~~~--~~-----~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                   .....+  .+     ...+.++.+++.+||+.||++|||+.++++|-+-
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f  379 (391)
T PHA03212        318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAF  379 (391)
T ss_pred             hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhh
Confidence                         000000  00     1246688999999999999999999999988764

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.1e-30  Score=214.37  Aligned_cols=173  Identities=14%  Similarity=0.159  Sum_probs=135.2

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||+..++|........         ...+.|++.||+|||+++|+||||||+|  |++++++.++|+|||++.....
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N--il~~~~~~~~l~Dfg~~~~~~~  154 (285)
T cd05605          77 LVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPEN--ILLDDYGHIRISDLGLAVEIPE  154 (285)
T ss_pred             EEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHH--EEECCCCCEEEeeCCCceecCC
Confidence            4678998888876553221         2345677899999999999999999999  9999999999999999987543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh--cCCCCCCCCCCcHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR--EGERLPRPEACPVE  149 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~  149 (251)
                      ..  ......++..|+|||++.+..++.++||||+|+++||+++ |..||.+.........+..  .......+..++..
T Consensus       155 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (285)
T cd05605         155 GE--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIE-GKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEA  231 (285)
T ss_pred             CC--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHH-CCCCCCCCchhhHHHHHHHHhhhcccccCcccCHH
Confidence            22  1223467889999999998889999999999999999999 9999987654332222211  12233345568899


Q ss_pred             HHHHHHHHhccCCCCCC-----CHHHHHHHHHhh
Q psy2787         150 VYALMRQCWSKNPAERP-----KFSTLKDCLYRL  178 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rp-----s~~~il~~l~~~  178 (251)
                      +.+++.+||..||++||     ++.+++.|.+-.
T Consensus       232 ~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~  265 (285)
T cd05605         232 ARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFR  265 (285)
T ss_pred             HHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCcc
Confidence            99999999999999999     888998885543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.96  E-value=3.6e-30  Score=211.51  Aligned_cols=173  Identities=15%  Similarity=0.251  Sum_probs=133.5

Q ss_pred             cccccchhHHHHHhcC---C--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTE---P--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~---~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .+||.+.++|.+.+..   .        ....+.+++.||+|||++||+|+||||+|  |+++.++.++|+|||++....
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~n--ili~~~~~~~l~dfg~~~~~~  157 (267)
T cd08229          80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPAN--VFITATGVVKLGDLGLGRFFS  157 (267)
T ss_pred             EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEEcCCCCEEECcchhhhccc
Confidence            4677777777665431   1        11235678899999999999999999999  999999999999999988654


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh--hHHHHHHHhcCCCCCCCCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG--MQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      .... ......++..|+|||++.+..++.++|+||||+++|+|++ |..||.+...  ......+.........+..++.
T Consensus       158 ~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (267)
T cd08229         158 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE  235 (267)
T ss_pred             cCCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHh-CCCCcccccchHHHHhhhhhcCCCCCCCcccccH
Confidence            3321 1223457788999999988889999999999999999999 9999976432  2333444322222223345888


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.+++.+||..+|++|||+.+|++.+.++
T Consensus       236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         236 ELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            999999999999999999999999988765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.96  E-value=3.5e-30  Score=211.74  Aligned_cols=171  Identities=19%  Similarity=0.287  Sum_probs=134.2

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||.+.++|.+.+...       ...++.|++.||+|||+++|+||||+|+|  |+++.++.+||+|||+++.......
T Consensus        84 ~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~n--il~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          84 FMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGAN--ILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH--EEECCCCCEEEccCCCccccccccc
Confidence            56888888887765432       12356788899999999999999999999  9999999999999999876432111


Q ss_pred             --eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          75 --VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        75 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        .......++..|+|||++.+..++.++|+||+||++||+++ |..||.+................+..+..++..+.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT-EKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARD  240 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHH-CCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHH
Confidence              11123457788999999998889999999999999999999 999998776555444443344445555667888899


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++ +||..+|++||++++++.|-.
T Consensus       241 li-~~~~~~p~~Rp~~~eil~hp~  263 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLRHPF  263 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhcCcc
Confidence            98 688899999999999988743

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=7.5e-30  Score=211.78  Aligned_cols=175  Identities=28%  Similarity=0.509  Sum_probs=134.5

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...        ...++.+++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~N--il~~~~~~~~l~dfg~~~~~~~~  162 (284)
T cd05079          85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARN--VLVESEHQVKIGDFGLTKAIETD  162 (284)
T ss_pred             EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchhe--EEEcCCCCEEECCCccccccccC
Confidence            367899988888766432        12455688899999999999999999999  99999999999999999875432


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--------------hhHHHHHHHhc
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN--------------GMQILQKIDRE  136 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~--------------~~~~~~~i~~~  136 (251)
                      .  ........++..|+|||++.+..++.++||||||+++||+++ +..|+....              ...........
T Consensus       163 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (284)
T cd05079         163 KEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLT-YCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEE  241 (284)
T ss_pred             ccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhc-CCCCCccccchhhhhcccccccccHHHHHHHHHc
Confidence            2  122234556777999999988888999999999999999999 766542210              01111112234


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +...+.+..++..+.+++.+||+.+|++|||+.++++.++.+
T Consensus       242 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         242 GKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             CccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence            445555677899999999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>KOG1094|consensus

Probab=99.96  E-value=1.9e-30  Score=222.37  Aligned_cols=176  Identities=28%  Similarity=0.516  Sum_probs=149.1

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc-cC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY-SQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~-~~   70 (251)
                      |.+||++.|||..+..+.         +....+|++.|++||.+.+++||||.+.|  +|+++++++||+|||+++- +.
T Consensus       612 mI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rN--cLv~~e~~iKiadfgmsR~lys  689 (807)
T KOG1094|consen  612 MITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRN--CLVDGEFTIKIADFGMSRNLYS  689 (807)
T ss_pred             HHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccc--eeecCcccEEecCccccccccc
Confidence            678888888888765432         34456788899999999999999999999  9999999999999999996 66


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCChhHHHHHHHh---cC---CCCCCC
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT-FGAEPWVGLNGMQILQKIDR---EG---ERLPRP  143 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~-~g~~pf~~~~~~~~~~~i~~---~~---~~~~~~  143 (251)
                      .+.+........+.+|||+|.+..++++.++|+|+||+++||+++ |.+.||.....+++.+....   .+   ..+..|
T Consensus       690 g~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P  769 (807)
T KOG1094|consen  690 GDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRP  769 (807)
T ss_pred             CCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCC
Confidence            677777788889999999999999999999999999999999876 46789988887777665422   11   123557


Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       144 ~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ..||..+.++|..||..|.++||+++++..+|...
T Consensus       770 ~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~  804 (807)
T KOG1094|consen  770 PACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED  804 (807)
T ss_pred             CcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence            88999999999999999999999999999888654

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.96  E-value=3.7e-30  Score=213.23  Aligned_cols=171  Identities=17%  Similarity=0.227  Sum_probs=130.8

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||+..++|.+......         ..++.|++.||+|||+.+|+|+||+|+|  |+++.++.++|+|||++.....
T Consensus        96 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~n--ili~~~~~~~l~dfg~~~~~~~  173 (282)
T cd06636          96 LVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQN--VLLTENAEVKLVDFGVSAQLDR  173 (282)
T ss_pred             EEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEECCCCCEEEeeCcchhhhhc
Confidence            3578888777776554321         2345678899999999999999999999  9999999999999999876432


Q ss_pred             CceeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q psy2787          72 DCYVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEAC  146 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  146 (251)
                      .. .......++..|+|||++.     ...++.++|+||||+++|||++ |..||...........+............+
T Consensus       174 ~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (282)
T cd06636         174 TV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAE-GAPPLCDMHPMRALFLIPRNPPPKLKSKKW  251 (282)
T ss_pred             cc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHh-CCCCccccCHHhhhhhHhhCCCCCCccccc
Confidence            21 1223456788899999886     3457789999999999999999 999997765444333332222222233468


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +.++.+++.+||..||.+|||+.+++++-
T Consensus       252 ~~~~~~li~~cl~~~p~~Rp~~~ell~~~  280 (282)
T cd06636         252 SKKFIDFIEGCLVKNYLSRPSTEQLLKHP  280 (282)
T ss_pred             CHHHHHHHHHHhCCChhhCcCHHHHhcCC
Confidence            89999999999999999999999998763

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=7.7e-30  Score=208.43  Aligned_cols=165  Identities=21%  Similarity=0.355  Sum_probs=127.9

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-------ceEEccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-------SSSSGDFGM   65 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-------~~kl~DFGl   65 (251)
                      |.+||++.++|.+++....        ...+.|++.||+|||+++|+||||||+|  |+++.++       .+||+|||+
T Consensus        77 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~N--ill~~~~~~~~~~~~~kl~Dfg~  154 (259)
T cd05037          77 MVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKN--ILVARYGLNEGYVPFIKLSDPGI  154 (259)
T ss_pred             EEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccce--EEEecCccccCCceeEEeCCCCc
Confidence            4678999888887664322        2345688899999999999999999999  9998877       799999999


Q ss_pred             CcccCCCceeecCCCCcCcccCCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC
Q psy2787          66 MRYSQNDCYVMTERKPLPCPWCPMESLKHN--QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP  143 (251)
Q Consensus        66 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  143 (251)
                      +.....     .....++..|+|||++.+.  .++.++||||||+++|+++++|..||...+..+...... .....+.+
T Consensus       155 a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~  228 (259)
T cd05037         155 PITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPMP  228 (259)
T ss_pred             cccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCCC
Confidence            886433     1223455679999999876  688999999999999999995578887765444333332 22222222


Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       144 ~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                        ....+.+++.+||..+|.+|||+.++++.|
T Consensus       229 --~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         229 --DCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             --CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence              237899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.3e-30  Score=221.23  Aligned_cols=174  Identities=16%  Similarity=0.186  Sum_probs=136.2

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.++|.+.+...        ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++......
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N--ill~~~~~~kl~Dfg~~~~~~~~  155 (331)
T cd05597          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDN--VLLDKNGHIRLADFGSCLRLLAD  155 (331)
T ss_pred             EEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHH--EEECCCCCEEEEECCceeecCCC
Confidence            468999999998876431        23456788899999999999999999999  99999999999999998765443


Q ss_pred             ceeecCCCCcCcccCCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC---C
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH-----NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP---E  144 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~---~  144 (251)
                      .........||+.|+|||++..     ..++.++||||+||++|+|++ |..||.+.+..+....+.........+   .
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  234 (331)
T cd05597         156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLY-GETPFYAESLVETYGKIMNHKEHFQFPPDVT  234 (331)
T ss_pred             CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCcccCCCccC
Confidence            3222333568899999999863     346789999999999999999 999999887777666665443333322   3


Q ss_pred             CCcHHHHHHHHHHhccCCC--CCCCHHHHHHHHHh
Q psy2787         145 ACPVEVYALMRQCWSKNPA--ERPKFSTLKDCLYR  177 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~--~Rps~~~il~~l~~  177 (251)
                      .++.++.+++.+|+..+++  .|+++.++++|.+-
T Consensus       235 ~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~  269 (331)
T cd05597         235 DVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFF  269 (331)
T ss_pred             CCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCC
Confidence            4788999999998865443  37899999999664

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0612|consensus

Probab=99.96  E-value=1.4e-30  Score=236.87  Aligned_cols=178  Identities=15%  Similarity=0.159  Sum_probs=155.7

Q ss_pred             CcccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.|||+++|||+..+.       ++++.++.+++.||.-||+.|+|||||||+|  ||+|..|++||+|||.|-.+..+.
T Consensus       152 lVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDN--vLld~~GHikLADFGsClkm~~dG  229 (1317)
T KOG0612|consen  152 LVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDN--VLLDKSGHIKLADFGSCLKMDADG  229 (1317)
T ss_pred             EEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcce--eEecccCcEeeccchhHHhcCCCC
Confidence            6899999999998654       3456778889999999999999999999999  999999999999999999888777


Q ss_pred             eeecCCCCcCcccCCCcccC----C-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCC
Q psy2787          74 YVMTERKPLPCPWCPMESLK----H-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EAC  146 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~----~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~  146 (251)
                      ........|||.|.+||++.    + +.|+..+|.||+||++|||+. |..||...+..+.+.+|+.....+.+|  ..+
T Consensus       230 ~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMly-G~TPFYadslveTY~KIm~hk~~l~FP~~~~V  308 (1317)
T KOG0612|consen  230 TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLY-GETPFYADSLVETYGKIMNHKESLSFPDETDV  308 (1317)
T ss_pred             cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHc-CCCcchHHHHHHHHHHHhchhhhcCCCccccc
Confidence            88888999999999999986    2 568999999999999999999 999999999999999998876666665  669


Q ss_pred             cHHHHHHHHHHhccCCCCCCC---HHHHHHHHHhhcHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPK---FSTLKDCLYRLTPAV  182 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps---~~~il~~l~~~~~~~  182 (251)
                      |.++++||.+.+. +|+.|..   +.++..|....--..
T Consensus       309 SeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W  346 (1317)
T KOG0612|consen  309 SEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW  346 (1317)
T ss_pred             CHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence            9999999998775 7888888   999999876544333

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.96  E-value=1.2e-30  Score=221.39  Aligned_cols=173  Identities=14%  Similarity=0.185  Sum_probs=137.5

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...        ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        78 lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~N--ill~~~~~~kl~DfG~a~~~~~~  155 (331)
T cd05624          78 LVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDN--VLLDMNGHIRLADFGSCLKMNQD  155 (331)
T ss_pred             EEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHH--EEEcCCCCEEEEeccceeeccCC
Confidence            468999999998876532        12345688899999999999999999999  99999999999999999875443


Q ss_pred             ceeecCCCCcCcccCCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC---C
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH-----NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP---E  144 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~---~  144 (251)
                      .........|++.|+|||++.+     ..++.++||||+|+++|+|++ |..||.+.+..+....+.....+.+.+   .
T Consensus       156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  234 (331)
T cd05624         156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLY-GETPFYAESLVETYGKIMNHEERFQFPSHIT  234 (331)
T ss_pred             CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhh-CCCCccCCCHHHHHHHHHcCCCcccCCCccc
Confidence            3323334568999999999875     457889999999999999999 999999887777777765544444433   3


Q ss_pred             CCcHHHHHHHHHHhccCCCC--CCCHHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAE--RPKFSTLKDCLY  176 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~--Rps~~~il~~l~  176 (251)
                      .++.++.+++.+|+..++++  |++++++++|.+
T Consensus       235 ~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~  268 (331)
T cd05624         235 DVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAF  268 (331)
T ss_pred             cCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCC
Confidence            46889999999999876554  468899988754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0690|consensus

Probab=99.96  E-value=1.6e-30  Score=209.47  Aligned_cols=167  Identities=18%  Similarity=0.210  Sum_probs=142.2

Q ss_pred             cccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc-cCCCc
Q psy2787           2 SANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY-SQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~-~~~~~   73 (251)
                      .|||+..|+|.-.+..       -.+.+-.+|..||.|||+++||+||||.+|  .++|.+|++||+|||+++. +... 
T Consensus       246 VMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLEN--LlLDkDGHIKitDFGLCKE~I~~g-  322 (516)
T KOG0690|consen  246 VMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLEN--LLLDKDGHIKITDFGLCKEEIKYG-  322 (516)
T ss_pred             EEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhh--heeccCCceEeeecccchhccccc-
Confidence            5899999998764432       234556788999999999999999999999  9999999999999999987 3222 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       ....+.+||+.|.|||++....|+.++|.|.+|+++|||++ |++||...+...++..|.....+  .|..++++++.|
T Consensus       323 -~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmC-GRLPFyn~dh~kLFeLIl~ed~k--FPr~ls~eAktL  398 (516)
T KOG0690|consen  323 -DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMC-GRLPFYNKDHEKLFELILMEDLK--FPRTLSPEAKTL  398 (516)
T ss_pred             -ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHh-ccCcccccchhHHHHHHHhhhcc--CCccCCHHHHHH
Confidence             23466899999999999999999999999999999999999 99999999988888888766544  456789999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHH
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCL  175 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l  175 (251)
                      +..+|.+||.+|.     ++.+|.+|-
T Consensus       399 LsGLL~kdP~kRLGgGpdDakEi~~h~  425 (516)
T KOG0690|consen  399 LSGLLKKDPKKRLGGGPDDAKEIMRHR  425 (516)
T ss_pred             HHHHhhcChHhhcCCCchhHHHHHhhh
Confidence            9999999999995     356666553

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.5e-30  Score=210.57  Aligned_cols=172  Identities=16%  Similarity=0.226  Sum_probs=138.5

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      |.+||++.++|.+.....      ....+.|++.||.|||+++|+|+||+|+|  |+++.++.++|+|||+++...... 
T Consensus        76 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~n--i~i~~~~~~~l~d~g~~~~~~~~~-  152 (274)
T cd06609          76 IIMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAAN--ILLSEEGDVKLADFGVSGQLTSTM-  152 (274)
T ss_pred             EEEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH--EEECCCCCEEEcccccceeecccc-
Confidence            357888888888876643      13456677899999999999999999999  999999999999999998754432 


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCC-CcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEA-CPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~l  153 (251)
                      .......++..|+|||++.+..++.++||||||+++|+|++ |..||.+.+.......+.. ...+..+.. ++.++.++
T Consensus       153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  230 (274)
T cd06609         153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAK-GEPPLSDLHPMRVLFLIPK-NNPPSLEGNKFSKPFKDF  230 (274)
T ss_pred             cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHh-CCCCcccCchHHHHHHhhh-cCCCCCcccccCHHHHHH
Confidence            12234466778999999998889999999999999999999 9999987766555554432 333333334 78899999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+||..+|++|||+++++.+-+-
T Consensus       231 l~~~l~~~p~~Rpt~~~il~~~~~  254 (274)
T cd06609         231 VSLCLNKDPKERPSAKELLKHKFI  254 (274)
T ss_pred             HHHHhhCChhhCcCHHHHhhChhh
Confidence            999999999999999999987554

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.96  E-value=3.3e-30  Score=213.45  Aligned_cols=172  Identities=19%  Similarity=0.263  Sum_probs=132.6

Q ss_pred             CcccccchhHHHHHhc---CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeec
Q psy2787           1 MSANFAELNAFQENYT---EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMT   77 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~---~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~   77 (251)
                      |.+||++.+++.....   .....++.|++.||+|||+.+|+|+||||+|  |+++.++.+||+|||++......   ..
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--ill~~~~~~~l~dfg~~~~~~~~---~~  150 (279)
T cd06619          76 ICTEFMDGGSLDVYRKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSN--MLVNTRGQVKLCDFGVSTQLVNS---IA  150 (279)
T ss_pred             EEEecCCCCChHHhhcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHH--EEECCCCCEEEeeCCcceecccc---cc
Confidence            3578888887764322   1223567888999999999999999999999  99999999999999999865433   22


Q ss_pred             CCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-------hHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          78 ERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-------MQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        78 ~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ....++..|+|||++.+..++.++|+||||+++|+|++ |..||.....       ......+.............++++
T Consensus       151 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (279)
T cd06619         151 KTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELAL-GRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKF  229 (279)
T ss_pred             cCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHh-CCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHH
Confidence            34567888999999998889999999999999999999 9999965321       122222221111111223477899


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+++.+||..+|++||++++++++.+-.
T Consensus       230 ~~li~~~l~~~P~~Rp~~~eil~~~~~~  257 (279)
T cd06619         230 VHFITQCMRKQPKERPAPENLMDHPFIV  257 (279)
T ss_pred             HHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence            9999999999999999999999986643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=2.1e-29  Score=208.22  Aligned_cols=165  Identities=21%  Similarity=0.280  Sum_probs=126.2

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-------ceEEccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-------SSSSGDFGM   65 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-------~~kl~DFGl   65 (251)
                      |.+||++.++|........        .+++.|+++||+|||+++|+||||||+|  |+++..+       .+|++|||+
T Consensus        93 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~N--ill~~~~~~~~~~~~~kl~d~g~  170 (274)
T cd05076          93 MVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKN--ILLARLGLAEGTSPFIKLSDPGV  170 (274)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCccc--EEEeccCcccCccceeeecCCcc
Confidence            4689999998877654322        2356788899999999999999999999  8886543       489999998


Q ss_pred             CcccCCCceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q psy2787          66 MRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE  144 (251)
Q Consensus        66 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  144 (251)
                      +......     ....++..|+|||++.+ ..++.++||||||+++||++..|..||.+....+....+ ....  ..+.
T Consensus       171 ~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~--~~~~  242 (274)
T cd05076         171 SFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFY-EKKH--RLPE  242 (274)
T ss_pred             ccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHH-Hhcc--CCCC
Confidence            8653221     22345677999998875 457899999999999999954399999876655443332 2222  2233


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ..+..+.+++.+||+.+|++|||+.++++.|
T Consensus       243 ~~~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         243 PSCKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             CCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            4567899999999999999999999999887

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PTZ00284 protein kinase; Provisional

Probab=99.96  E-value=5.8e-30  Score=226.65  Aligned_cols=151  Identities=15%  Similarity=0.190  Sum_probs=116.9

Q ss_pred             CCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCC----------------ceEEccCCCCcccCCCceeecCCCCcC
Q psy2787          21 KPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSS----------------SSSSGDFGMMRYSQNDCYVMTERKPLP   83 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~----------------~~kl~DFGla~~~~~~~~~~~~~~~~~   83 (251)
                      .++.|++.||+|||+ .|||||||||+|  ||++.++                .+||+|||++.....    ......||
T Consensus       235 ~i~~qi~~aL~yLH~~~gIiHrDlKP~N--ILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt  308 (467)
T PTZ00284        235 QIIFQTGVALDYFHTELHLMHTDLKPEN--ILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH----SRTAIVST  308 (467)
T ss_pred             HHHHHHHHHHHHHHhcCCeecCCCCHHH--EEEecCCcccccccccccCCCCceEEECCCCccccCcc----ccccccCC
Confidence            467788999999998 599999999999  8887655                499999998864322    23345788


Q ss_pred             cccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC----------------------
Q psy2787          84 CPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP----------------------  141 (251)
Q Consensus        84 ~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~----------------------  141 (251)
                      ..|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+....+......++                      
T Consensus       309 ~~Y~APE~~~~~~~~~~~DiwSlGvil~ellt-G~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  387 (467)
T PTZ00284        309 RHYRSPEVVLGLGWMYSTDMWSMGCIIYELYT-GKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQL  387 (467)
T ss_pred             ccccCcHHhhcCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccc
Confidence            99999999999999999999999999999999 9999988765544433322110000                      


Q ss_pred             ---C-C--------------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         142 ---R-P--------------EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       142 ---~-~--------------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                         . +              ......+.+||.+||..||++|||+.++++|.+-.
T Consensus       388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~  442 (467)
T PTZ00284        388 RPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVL  442 (467)
T ss_pred             cccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccc
Confidence               0 0              01134577999999999999999999999987643

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.96  E-value=4.1e-30  Score=214.80  Aligned_cols=172  Identities=17%  Similarity=0.250  Sum_probs=135.4

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.+...      ...++.+++.||+|||+.||+||||||+|  |+++.++.+||+|||++........
T Consensus        94 lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~N--ill~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654          94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN--ILLGMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             EeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEEcCCCCEEECccccchhcccccc
Confidence            367899988888876542      22455678899999999999999999999  9999999999999999876433211


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~l  153 (251)
                       ......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........+...+ ...+.+..++..+.++
T Consensus       172 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  249 (296)
T cd06654         172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF  249 (296)
T ss_pred             -ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHh-CCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHH
Confidence             1233467788999999998888999999999999999999 999998766543333222222 1223345688899999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+||..+|++||++.+++++-+
T Consensus       250 i~~~l~~~p~~Rpt~~eil~~~~  272 (296)
T cd06654         250 LNRCLDMDVEKRGSAKELLQHQF  272 (296)
T ss_pred             HHHHCcCCcccCcCHHHHhhChh
Confidence            99999999999999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.96  E-value=1.7e-30  Score=213.60  Aligned_cols=171  Identities=16%  Similarity=0.228  Sum_probs=129.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+.+...       ....+.|++.||+|||+.+|+||||+|+|  |+++.++.+||+|||++.......
T Consensus        83 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~n--ill~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGAN--ILLTDNGDVKLADFGVAAKITATI  160 (267)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH--EEECCCCCEEECcCccceeecccc
Confidence            467899888888765422       22345678899999999999999999999  999999999999999998653221


Q ss_pred             eeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC---CCCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP---RPEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~  147 (251)
                       .......++..|+|||.+.   ...++.++|+||+||++|||++ |..||......+....+.......+   ....++
T Consensus       161 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd06646         161 -AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWS  238 (267)
T ss_pred             -cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHh-CCCCccccchhhhheeeecCCCCCCCCccccccC
Confidence             1123345778899999884   3457789999999999999999 9999966544332222222222221   123467


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ..+.+++.+||..+|++|||++++++++
T Consensus       239 ~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         239 STFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            8999999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0596|consensus

Probab=99.96  E-value=3.2e-30  Score=219.79  Aligned_cols=172  Identities=17%  Similarity=0.293  Sum_probs=128.5

Q ss_pred             Cccccc--chhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFA--ELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~--~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.|||.  +|...+......     ++.++.|++.++.++|..||||.||||.|+  |+- .|.+||+|||.|..+..+.
T Consensus       437 mvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANF--LlV-kG~LKLIDFGIA~aI~~DT  513 (677)
T KOG0596|consen  437 MVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANF--LLV-KGRLKLIDFGIANAIQPDT  513 (677)
T ss_pred             EEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccE--EEE-eeeEEeeeechhcccCccc
Confidence            456654  445555433322     345678889999999999999999999993  332 6789999999999866554


Q ss_pred             e-eecCCCCcCcccCCCcccCCC-----------CCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCC
Q psy2787          74 Y-VMTERKPLPCPWCPMESLKHN-----------QFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERL  140 (251)
Q Consensus        74 ~-~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~  140 (251)
                      + ....+..||+.||+||.+...           ..+.++||||+|||||+|+. |+.||..... ..-+..|...+...
T Consensus       514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY-gktPf~~~~n~~aKl~aI~~P~~~I  592 (677)
T KOG0596|consen  514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY-GKTPFGQIINQIAKLHAITDPNHEI  592 (677)
T ss_pred             cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh-cCCchHHHHHHHHHHHhhcCCCccc
Confidence            3 345678999999999988632           25689999999999999999 9999976543 22333443333433


Q ss_pred             CCCCCCcH-HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         141 PRPEACPV-EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       141 ~~~~~~~~-~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.|...+. ++.+++..||+.||.+||++.++++|..
T Consensus       593 efp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpF  629 (677)
T KOG0596|consen  593 EFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPF  629 (677)
T ss_pred             cccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcc
Confidence            44443333 3999999999999999999999998753

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.96  E-value=1.1e-29  Score=207.34  Aligned_cols=169  Identities=17%  Similarity=0.226  Sum_probs=139.1

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||++.++|.+.+....         ...+.+++.||+|||+.+++|+||+|+|  |+++.++.+||+|||++......
T Consensus        77 ~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~n--i~~~~~~~~kl~d~~~~~~~~~~  154 (256)
T cd08221          77 EMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLN--IFLTKAGLIKLGDFGISKILGSE  154 (256)
T ss_pred             EEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHh--EEEeCCCCEEECcCcceEEcccc
Confidence            578999888888765432         2235677899999999999999999999  99999999999999999875443


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .. ......++..|+|||++.+..++.++|+||+|+++|+|++ |..||......+....+.. +...+.+..++.++.+
T Consensus       155 ~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  231 (256)
T cd08221         155 YS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLT-LKRTFDATNPLNLVVKIVQ-GNYTPVVSVYSSELIS  231 (256)
T ss_pred             cc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHc-CCCCCCccccCHHHHH
Confidence            21 2234567888999999988888899999999999999999 9999988777776666643 3334445678899999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.+||..+|++||++.++++++
T Consensus       232 ~i~~~l~~~p~~R~s~~~ll~~~  254 (256)
T cd08221         232 LVHSLLQQDPEKRPTADEVLDQP  254 (256)
T ss_pred             HHHHHcccCcccCCCHHHHhhCc
Confidence            99999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.96  E-value=1.3e-29  Score=212.82  Aligned_cols=172  Identities=15%  Similarity=0.142  Sum_probs=128.7

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++. ++.+.....        ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        82 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~N--ill~~~~~~kl~Dfg~~~~~~~~~  158 (309)
T cd07872          82 VFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQN--LLINERGELKLADFGLARAKSVPT  158 (309)
T ss_pred             EEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEECCCCCEEECccccceecCCCc
Confidence            5677764 555544322        22345688899999999999999999999  999999999999999997643322


Q ss_pred             eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC--------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE--------------  138 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~--------------  138 (251)
                      . ......++..|+|||++.+ ..++.++||||+||++|+|++ |..||.+.+..+....+...-.              
T Consensus       159 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (309)
T cd07872         159 K-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS-GRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND  236 (309)
T ss_pred             c-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence            1 1223456788999998865 457899999999999999999 9999987765444333321100              


Q ss_pred             -----C-C--------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         139 -----R-L--------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       139 -----~-~--------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                           . +        .....++.++.+++.+|+..||.+|||+.++++|.+-.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~  290 (309)
T cd07872         237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFR  290 (309)
T ss_pred             hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhh
Confidence                 0 0        01134678899999999999999999999999977653

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>KOG1187|consensus

Probab=99.96  E-value=5.5e-30  Score=218.07  Aligned_cols=174  Identities=18%  Similarity=0.269  Sum_probs=129.7

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCC---cccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNN---ICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~---iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      ++.||+++|+|.+.+.....         +++.++++||+|||...   ||||||||+|  ||+|+++.+||+|||+|+.
T Consensus       149 LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssN--ILLD~~~~aKlsDFGLa~~  226 (361)
T KOG1187|consen  149 LVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSN--ILLDEDFNAKLSDFGLAKL  226 (361)
T ss_pred             EEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHH--eeECCCCCEEccCccCccc
Confidence            35799999999998887554         55566679999999853   9999999999  9999999999999999976


Q ss_pred             cCC-CceeecCCC-CcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---hhHHHH---HHHhcCCCC
Q psy2787          69 SQN-DCYVMTERK-PLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN---GMQILQ---KIDREGERL  140 (251)
Q Consensus        69 ~~~-~~~~~~~~~-~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~---~~~~~~---~i~~~~~~~  140 (251)
                      ... ...  .... .||.+|+|||+...+..+.++||||||+++.|+++ |+.+.+...   ...+..   .....+...
T Consensus       227 ~~~~~~~--~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElit-gr~~~d~~~~~~~~~l~~w~~~~~~~~~~~  303 (361)
T KOG1187|consen  227 GPEGDTS--VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELIT-GRKAVDQSRPRGELSLVEWAKPLLEEGKLR  303 (361)
T ss_pred             CCccccc--eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHh-CCcccCCCCCcccccHHHHHHHHHHCcchh
Confidence            443 211  1112 88999999999998899999999999999999999 998876432   111122   122221111


Q ss_pred             -----CCC-CCCc-----HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         141 -----PRP-EACP-----VEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       141 -----~~~-~~~~-----~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                           ... ...+     ..+..+..+|++.+|..||+|.+|++.|..+.
T Consensus       304 eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  304 EIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             heeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence                 101 1122     23557888999999999999999988885443

>KOG0696|consensus

Probab=99.96  E-value=1.6e-29  Score=209.39  Aligned_cols=159  Identities=18%  Similarity=0.243  Sum_probs=140.4

Q ss_pred             cccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc-cCCCc
Q psy2787           2 SANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY-SQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~-~~~~~   73 (251)
                      .|||+..|||...+++       .+..+..+++-||-+||++|||+||||.+|  |+++..|++||+|||+++. +-+. 
T Consensus       428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDN--vmLd~eGHiKi~DFGmcKEni~~~-  504 (683)
T KOG0696|consen  428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDN--VMLDSEGHIKIADFGMCKENIFDG-  504 (683)
T ss_pred             EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccc--eEeccCCceEeeecccccccccCC-
Confidence            5899999999987664       345677888999999999999999999999  9999999999999999987 2222 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       ..+.+.+||+.|+|||++...+|+.++|.||||++||||+. |+.||.|.+..++++.|.......  |..++.++.++
T Consensus       505 -~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmla-GQpPFdGeDE~elF~aI~ehnvsy--PKslSkEAv~i  580 (683)
T KOG0696|consen  505 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQPPFDGEDEDELFQAIMEHNVSY--PKSLSKEAVAI  580 (683)
T ss_pred             -cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHHccCcC--cccccHHHHHH
Confidence             13456789999999999999999999999999999999999 999999999999999997665444  56899999999


Q ss_pred             HHHHhccCCCCCCC
Q psy2787         154 MRQCWSKNPAERPK  167 (251)
Q Consensus       154 i~~cl~~dP~~Rps  167 (251)
                      +...+.+.|.+|..
T Consensus       581 ckg~ltK~P~kRLG  594 (683)
T KOG0696|consen  581 CKGLLTKHPGKRLG  594 (683)
T ss_pred             HHHHhhcCCccccC
Confidence            99999999999964

>KOG0658|consensus

Probab=99.96  E-value=9.7e-30  Score=207.63  Aligned_cols=150  Identities=15%  Similarity=0.143  Sum_probs=120.2

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC-CCCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFS   98 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~   98 (251)
                      -+..|+.+||+|||+.|||||||||+|  +|+|.+ |.+||||||.|+.......  ..+-..+..|.|||.+.+ ..|+
T Consensus       129 LYt~Qlfrgl~yLh~~~IcHRDIKPqN--lLvD~~tg~LKicDFGSAK~L~~~ep--niSYicSRyYRaPELifga~~Yt  204 (364)
T KOG0658|consen  129 LYTYQLFRGLAYLHSHGICHRDIKPQN--LLVDPDTGVLKICDFGSAKVLVKGEP--NISYICSRYYRAPELIFGATEYT  204 (364)
T ss_pred             HHHHHHHHHHHHHHhcCcccCCCChhe--EEEcCCCCeEEeccCCcceeeccCCC--ceeEEEeccccCHHHHcCccccC
Confidence            357789999999999999999999999  999887 8999999999998544321  222344556999999886 4699


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-CCC-----------------C---------CCCCCCcHHHH
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GER-----------------L---------PRPEACPVEVY  151 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~~~-----------------~---------~~~~~~~~~~~  151 (251)
                      .+.||||.|||+.||+. |++-|+|.+..+.+..|..- |.+                 +         -.....+++..
T Consensus       205 ~~IDiWSaGCV~aELl~-g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~  283 (364)
T KOG0658|consen  205 TSIDIWSAGCVMAELLK-GQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDAL  283 (364)
T ss_pred             ceeEEhhhhHHHHHHhc-CCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHH
Confidence            99999999999999999 99999998776555544331 000                 0         01245788999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +++.+++..+|.+|.++.+++.|-
T Consensus       284 dll~~~L~Y~P~~R~~~~~~l~h~  307 (364)
T KOG0658|consen  284 DLLSKLLQYSPSKRLSALEALAHP  307 (364)
T ss_pred             HHHHHHhccChhhcCCHHHHhcch
Confidence            999999999999999999998763

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.96  E-value=2.1e-29  Score=210.50  Aligned_cols=172  Identities=16%  Similarity=0.236  Sum_probs=136.5

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||++.++|.+.....      ....+.+++.||+|||++||+|+||||+|  |+++.++.+||+|||++........ 
T Consensus        94 v~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~N--ili~~~~~~kl~dfg~~~~~~~~~~-  170 (296)
T cd06655          94 VMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDN--VLLGMDGSVKLTDFGFCAQITPEQS-  170 (296)
T ss_pred             EEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEECCCCCEEEccCccchhcccccc-
Confidence            57888888888765532      22345677899999999999999999999  9999999999999999886443321 


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCCcHHHHHHH
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVYALM  154 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~li  154 (251)
                      ......++..|+|||.+.+..++.++|+|||||++|++++ |..||.+.+.......+.... .....+..++..+.+++
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~llt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (296)
T cd06655         171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFL  249 (296)
T ss_pred             cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHH
Confidence            1233467788999999998889999999999999999999 999998876544443332222 22234566888999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHh
Q psy2787         155 RQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       155 ~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .+||..+|++||++.+++.+-+-
T Consensus       250 ~~~l~~dp~~Rpt~~~il~~~~~  272 (296)
T cd06655         250 NRCLEMDVEKRGSAKELLQHPFL  272 (296)
T ss_pred             HHHhhcChhhCCCHHHHhhChHh
Confidence            99999999999999999987654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=1.6e-29  Score=206.96  Aligned_cols=170  Identities=16%  Similarity=0.224  Sum_probs=132.5

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.+++.+.+....        ...+.|++.||+|||+++|+|+||+|+|  |+++.++.+||+|||++......
T Consensus        77 l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~n--i~i~~~~~~~l~d~g~~~~~~~~  154 (262)
T cd06613          77 IVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGAN--ILLTEDGDVKLADFGVSAQLTAT  154 (262)
T ss_pred             EEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhh--EEECCCCCEEECccccchhhhhh
Confidence            3578888888887665432        2356677899999999999999999999  99999999999999998764432


Q ss_pred             ceeecCCCCcCcccCCCcccCCC---CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC---CCCCCC
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHN---QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL---PRPEAC  146 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~---~~~~~~  146 (251)
                      . .......++..|+|||.+.+.   .++.++|+||||+++|+|++ |..||.+.+..+....+.......   ..+...
T Consensus       155 ~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (262)
T cd06613         155 I-AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAE-LQPPMFDLHPMRALFLISKSNFPPPKLKDKEKW  232 (262)
T ss_pred             h-hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCccccchhhh
Confidence            1 122334567789999999776   78899999999999999999 999998776554444333332222   122346


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      +.++.+++.+||..+|.+|||+.+++.+
T Consensus       233 ~~~~~~li~~~l~~~p~~Rpt~~~il~~  260 (262)
T cd06613         233 SPVFHDFIKKCLTKDPKKRPTATKLLQH  260 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            7789999999999999999999999865

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>KOG1989|consensus

Probab=99.96  E-value=3.4e-30  Score=230.09  Aligned_cols=173  Identities=13%  Similarity=0.167  Sum_probs=141.5

Q ss_pred             CcccccchhHHHHHhcC---------CCCCCCchhhHHhhhhhhCC--cccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTE---------PCRKPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~---------~~~~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      +.||||..|.|.++|..         ...+++.++++|+++||..+  |||||||-+|  ||+..+|..||||||.+.-.
T Consensus       119 lLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiEN--vLls~~g~~KLCDFGSatt~  196 (738)
T KOG1989|consen  119 LLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIEN--VLLSADGNYKLCDFGSATTK  196 (738)
T ss_pred             eehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhh--eEEcCCCCEEeCcccccccc
Confidence            46899999999887652         33567888899999999987  9999999999  99999999999999998752


Q ss_pred             -CCCc-------eeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC
Q psy2787          70 -QNDC-------YVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE  138 (251)
Q Consensus        70 -~~~~-------~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~  138 (251)
                       ....       ....-....|+.|.|||++.   +...+.|+|||+|||+||.++. ...||.+...    -.|+...+
T Consensus       197 ~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy-~t~PFe~sg~----laIlng~Y  271 (738)
T KOG1989|consen  197 ILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCY-FTTPFEESGK----LAILNGNY  271 (738)
T ss_pred             cCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHH-hCCCcCcCcc----eeEEeccc
Confidence             1110       00112356788899999875   6678999999999999999999 9999976533    23445677


Q ss_pred             CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         139 RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ..|..+.++..+.+||..||+.||.+||++.+++.++..+..
T Consensus       272 ~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~  313 (738)
T KOG1989|consen  272 SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN  313 (738)
T ss_pred             cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence            777777899999999999999999999999999999887654

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.96  E-value=1.2e-29  Score=208.40  Aligned_cols=170  Identities=16%  Similarity=0.215  Sum_probs=130.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ....+.+++.||+|||++||+|+||||+|  |+++.++.+||+|||++.......
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n--ili~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06645          83 ICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGAN--ILLTDNGHVKLADFGVSAQITATI  160 (267)
T ss_pred             EEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEECCCCCEEECcceeeeEccCcc
Confidence            467899999998866432       22355677899999999999999999999  999999999999999987643321


Q ss_pred             eeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC---CCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR---PEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~  147 (251)
                       .......++..|+|||++.   ...++.++|+||+||++|+|++ |..||..................++.   ...++
T Consensus       161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T cd06645         161 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAE-LQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWS  238 (267)
T ss_pred             -cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhc-CCCCcccccchhhHHhhhccCCCCCcccccCCCC
Confidence             1223456788899999874   4457889999999999999999 99998765443333322222222211   12467


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      ..+.+++.+||..+|++|||+.++++|
T Consensus       239 ~~~~~li~~~l~~~P~~R~~~~~ll~~  265 (267)
T cd06645         239 NSFHHFVKMALTKNPKKRPTAEKLLQH  265 (267)
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHhcC
Confidence            889999999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.96  E-value=1.1e-29  Score=211.82  Aligned_cols=173  Identities=16%  Similarity=0.250  Sum_probs=135.6

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.....      ....+.+++.||+|||+++|+||||||+|  |+++.++.+||+|||++....... 
T Consensus        96 lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~N--ill~~~~~~kL~dfg~~~~~~~~~-  172 (292)
T cd06658          96 VVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDS--ILLTSDGRIKLSDFGFCAQVSKEV-  172 (292)
T ss_pred             EEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHH--EEEcCCCCEEEccCcchhhccccc-
Confidence            357899888887765332      23456677899999999999999999999  999999999999999987643221 


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-CCCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~l  153 (251)
                      .......++..|+|||++.+..++.++|+||||+++||+++ |..||.+.+.......+... ....+.....+..+.++
T Consensus       173 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  251 (292)
T cd06658         173 PKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMID-GEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGF  251 (292)
T ss_pred             ccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHH
Confidence            12233457788999999988889999999999999999999 99999887665555544322 11222234578899999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+||..+|++|||+.+++++.+.
T Consensus       252 i~~~l~~~P~~Rpt~~~il~~~~~  275 (292)
T cd06658         252 LDLMLVREPSQRATAQELLQHPFL  275 (292)
T ss_pred             HHHHccCChhHCcCHHHHhhChhh
Confidence            999999999999999999987443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.96  E-value=1.8e-29  Score=206.95  Aligned_cols=171  Identities=17%  Similarity=0.216  Sum_probs=139.0

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+....       ...+.+++.||+|||+++++|+||+|+|  |+++.++.++|+|||++.......
T Consensus        70 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~n--ilv~~~~~~~l~df~~~~~~~~~~  147 (262)
T cd05572          70 MLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPEN--LLLDSNGYVKLVDFGFAKKLKSGQ  147 (262)
T ss_pred             EEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHH--EEEcCCCCEEEeeCCcccccCccc
Confidence            3578988888887665321       1244678899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--hhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN--GMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                        ......++..|++||++.+..++.++|+||+|+++|++++ |..||....  ..+....+.........+...+.++.
T Consensus       148 --~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (262)
T cd05572         148 --KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLT-GRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAK  224 (262)
T ss_pred             --ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHh-CCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHH
Confidence              2233456778999999988888999999999999999999 999998766  55566665543455566667789999


Q ss_pred             HHHHHHhccCCCCCCC-----HHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPK-----FSTLKDCLY  176 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps-----~~~il~~l~  176 (251)
                      +++.+||..+|++||+     +.++++|-+
T Consensus       225 ~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~  254 (262)
T cd05572         225 DLIKQLLRRNPEERLGNLKGGIKDIKKHKW  254 (262)
T ss_pred             HHHHHHccCChhhCcCCcccCHHHHhcChh
Confidence            9999999999999999     888888655

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.96  E-value=1.1e-29  Score=210.99  Aligned_cols=171  Identities=14%  Similarity=0.159  Sum_probs=133.3

Q ss_pred             cccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||+..++|.......         +...+.|++.||.|||+.+|+||||||+|  |+++.++.+||+|||++......
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~N--ili~~~~~~kl~Dfg~~~~~~~~  155 (285)
T cd05632          78 VLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPEN--ILLDDYGHIRISDLGLAVKIPEG  155 (285)
T ss_pred             EEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHH--EEECCCCCEEEecCCcceecCCC
Confidence            57888888887654321         23356678899999999999999999999  99999999999999998764332


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh--cCCCCCCCCCCcHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR--EGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~  150 (251)
                      .  ......++..|+|||++.+..++.++|+||+|+++|++++ |..||.+.........+..  .......+..++.++
T Consensus       156 ~--~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (285)
T cd05632         156 E--SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIE-GQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEA  232 (285)
T ss_pred             C--cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHH
Confidence            1  1234467889999999998889999999999999999999 9999987655433332211  111223446688899


Q ss_pred             HHHHHHHhccCCCCCCC-----HHHHHHHHHh
Q psy2787         151 YALMRQCWSKNPAERPK-----FSTLKDCLYR  177 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps-----~~~il~~l~~  177 (251)
                      .+++..||+.||++||+     +.+++.|-+-
T Consensus       233 ~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~  264 (285)
T cd05632         233 KSICKMLLTKDPKQRLGCQEEGAGEVKRHPFF  264 (285)
T ss_pred             HHHHHHHccCCHhHcCCCcccChHHHHcChhh
Confidence            99999999999999999     7788877443

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.96  E-value=3.4e-29  Score=208.66  Aligned_cols=171  Identities=18%  Similarity=0.254  Sum_probs=131.5

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.+++...+.+.        ....+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++.......
T Consensus        87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~N--ili~~~~~~kl~dfg~~~~~~~~~  164 (292)
T cd06644          87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGN--VLLTLDGDIKLADFGVSAKNVKTL  164 (292)
T ss_pred             EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcce--EEEcCCCCEEEccCccceeccccc
Confidence            57888888887654322        23456777899999999999999999999  999999999999999987633221


Q ss_pred             eeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-CCCCCCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-RLPRPEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~  147 (251)
                       .......++..|+|||++.     ...++.++|+|||||++|+|++ |..||...+.......+..... ....+..++
T Consensus       165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (292)
T cd06644         165 -QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ-IEPPHHELNPMRVLLKIAKSEPPTLSQPSKWS  242 (292)
T ss_pred             -cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhc-CCCCCccccHHHHHHHHhcCCCccCCCCcccC
Confidence             1122345677899999985     3446789999999999999999 9999987665544444432221 223345678


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .++.+++.+||..+|++||++.+++++.+
T Consensus       243 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~  271 (292)
T cd06644         243 MEFRDFLKTALDKHPETRPSAAQLLEHPF  271 (292)
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence            89999999999999999999999998754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=1.9e-29  Score=208.81  Aligned_cols=174  Identities=30%  Similarity=0.528  Sum_probs=136.1

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.+....        ...+.+++.||+|||+++|+|+||||+|  |+++.++.+||+|||++.......
T Consensus        86 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~n--il~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05038          86 IMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARN--ILVESEDLVKISDFGLAKVLPEDK  163 (284)
T ss_pred             EEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHh--EEEcCCCCEEEcccccccccccCC
Confidence            578888888887765432        3356778899999999999999999999  999999999999999998754321


Q ss_pred             --eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH--------------HHHHHHhcC
Q psy2787          74 --YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ--------------ILQKIDREG  137 (251)
Q Consensus        74 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~--------------~~~~i~~~~  137 (251)
                        ........++..|++||.+.+..++.++||||||+++|||++ |..|+.......              .........
T Consensus       164 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05038         164 DYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFT-YGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG  242 (284)
T ss_pred             cceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeec-cCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence              112223344556999999988889999999999999999999 999886532211              111222344


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+.+.+..++.++.+++.+||..+|++|||+.++++.|..+
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         243 ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            45555667889999999999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.96  E-value=4.7e-29  Score=204.65  Aligned_cols=174  Identities=16%  Similarity=0.270  Sum_probs=135.5

Q ss_pred             CcccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+.+...           ....+.++++||+|||+.||+|+||+|+|  |+++.++.++|+|||+++..
T Consensus        79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~n--il~~~~~~~~l~d~~~~~~~  156 (267)
T cd08224          79 IVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPAN--VFITATGVVKLGDLGLGRFF  156 (267)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhh--EEECCCCcEEEeccceeeec
Confidence            357899888887765321           12335667899999999999999999999  99999999999999998864


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--hhHHHHHHHhcCCCCCCCC-CC
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN--GMQILQKIDREGERLPRPE-AC  146 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~-~~  146 (251)
                      ..... ......++..|+|||.+.+..++.++|+||||+++|+|++ |..||....  ..+....+. .+...+.+. .+
T Consensus       157 ~~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  233 (267)
T cd08224         157 SSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMNLYSLCKKIE-KCDYPPLPADHY  233 (267)
T ss_pred             cCCCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHH-CCCCcccCCccHHHHHhhhh-cCCCCCCChhhc
Confidence            43221 1223456778999999988889999999999999999999 999996543  223333332 233333443 67


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +.++.+++.+||..+|++|||+.+|++.+..+.
T Consensus       234 ~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         234 SEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            889999999999999999999999999987764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.96  E-value=4.6e-29  Score=206.28  Aligned_cols=171  Identities=15%  Similarity=0.206  Sum_probs=136.3

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||++.++|.+.+...      ....+.+++.|+.|||+++|+|+||+|+|  |+++.++.++++|||++........ 
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~n--i~i~~~~~~~l~dfg~~~~~~~~~~-  156 (277)
T cd06642          80 IMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAAN--VLLSEQGDVKLADFGVAGQLTDTQI-  156 (277)
T ss_pred             EEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChhe--EEEeCCCCEEEccccccccccCcch-
Confidence            57899999888766432      12345677899999999999999999999  9999999999999999976543221 


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMR  155 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~  155 (251)
                      ......++..|+|||++.+..++.++|+||||+++|||++ |..||...........+ ..+.....+..++.++.+++.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~  234 (277)
T cd06642         157 KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAK-GEPPNSDLHPMRVLFLI-PKNSPPTLEGQYSKPFKEFVE  234 (277)
T ss_pred             hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHh-CCCCCcccchhhHHhhh-hcCCCCCCCcccCHHHHHHHH
Confidence            1223456778999999998889999999999999999999 99999876555444443 223333344567889999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHh
Q psy2787         156 QCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       156 ~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +||..+|++||++.+++.+.+-
T Consensus       235 ~~l~~~p~~Rp~~~~il~~~~~  256 (277)
T cd06642         235 ACLNKDPRFRPTAKELLKHKFI  256 (277)
T ss_pred             HHccCCcccCcCHHHHHHhHHH
Confidence            9999999999999999998653

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.96  E-value=2.6e-29  Score=205.00  Aligned_cols=170  Identities=18%  Similarity=0.289  Sum_probs=132.8

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.+....        ...+.+++.||.|||+.+|+|+||+|+|  |+++.++.+||+|||++.......
T Consensus        76 ~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~n--i~~~~~~~~~l~dfg~~~~~~~~~  153 (256)
T cd06612          76 VMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGN--ILLNEEGQAKLADFGVSGQLTDTM  153 (256)
T ss_pred             EEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcce--EEECCCCcEEEcccccchhcccCc
Confidence            578888888887654322        2356677899999999999999999999  999999999999999988754332


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-CCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~  152 (251)
                      . ......++..|+|||++.+..++.++||||||+++|+|++ |..||...........+... ......+..++..+.+
T Consensus       154 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (256)
T cd06612         154 A-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAE-GKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFND  231 (256)
T ss_pred             c-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHh-CCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHH
Confidence            1 2233446778999999998889999999999999999999 99999876554433332111 1122234457789999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.+||+.+|++|||+.+++.+-
T Consensus       232 ~i~~~l~~~P~~Rps~~~il~~~  254 (256)
T cd06612         232 FVKKCLVKDPEERPSAIQLLQHP  254 (256)
T ss_pred             HHHHHHhcChhhCcCHHHHhcCC
Confidence            99999999999999999998763

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4e-29  Score=210.45  Aligned_cols=174  Identities=15%  Similarity=0.201  Sum_probs=136.9

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||+..++|.+.+.....         ..+.|++.||+|||+.+++|+||||+|  |+++.++.++|+|||++.....
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--ili~~~~~~~l~dfg~~~~~~~  155 (316)
T cd05574          78 LVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPEN--ILLHESGHIMLSDFDLSKQSDV  155 (316)
T ss_pred             EEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHH--eEEcCCCCEEEeecchhhcccc
Confidence            35788888888876653221         234678899999999999999999999  9999999999999999876322


Q ss_pred             Cce----------------------------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy2787          72 DCY----------------------------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVG  123 (251)
Q Consensus        72 ~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~  123 (251)
                      ...                            .......|+..|+|||++.+..++.++||||||+++|+|++ |..||.+
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~-g~~pf~~  234 (316)
T cd05574         156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLY-GTTPFKG  234 (316)
T ss_pred             cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhh-CCCCCCC
Confidence            110                            01112356788999999998889999999999999999999 9999988


Q ss_pred             CChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCC----HHHHHHHHHh
Q psy2787         124 LNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK----FSTLKDCLYR  177 (251)
Q Consensus       124 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps----~~~il~~l~~  177 (251)
                      .+.......+.......+.....+.++.+++.+||..+|++||+    +.+++.+-+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~  292 (316)
T cd05574         235 SNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF  292 (316)
T ss_pred             CchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchh
Confidence            87766666655444444433447899999999999999999999    8888887443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.96  E-value=8.3e-30  Score=211.83  Aligned_cols=172  Identities=13%  Similarity=0.163  Sum_probs=133.9

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||+..++|.+.+...         ...++.|++.||.|||+.+|+||||||+|  |+++.++.++|+|||++.....
T Consensus        77 lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~N--il~~~~~~~~l~Dfg~~~~~~~  154 (285)
T cd05630          77 LVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPEN--ILLDDHGHIRISDLGLAVHVPE  154 (285)
T ss_pred             EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHH--EEECCCCCEEEeeccceeecCC
Confidence            357888888887655321         12346788899999999999999999999  9999999999999999876433


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh---HHHHHHHhcCCCCCCCCCCcH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM---QILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      ..  ......++..|+|||++.+..++.++||||+|+++|+|++ |..||.+....   .....+. .......+..++.
T Consensus       155 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~-g~~Pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  230 (285)
T cd05630         155 GQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA-GQSPFQQRKKKIKREEVERLV-KEVQEEYSEKFSP  230 (285)
T ss_pred             Cc--cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHh-CCCCCCCCCccchHHHHHhhh-hhhhhhcCccCCH
Confidence            22  1223468889999999998889999999999999999999 99999865322   1222221 1122234456888


Q ss_pred             HHHHHHHHHhccCCCCCCC-----HHHHHHHHHhh
Q psy2787         149 EVYALMRQCWSKNPAERPK-----FSTLKDCLYRL  178 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps-----~~~il~~l~~~  178 (251)
                      ++.+++.+||+.||++|||     +.++++|.+-.
T Consensus       231 ~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~  265 (285)
T cd05630         231 DARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK  265 (285)
T ss_pred             HHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence            9999999999999999999     88999887643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.96  E-value=3.2e-29  Score=207.28  Aligned_cols=175  Identities=14%  Similarity=0.212  Sum_probs=139.5

Q ss_pred             CcccccchhHHHHHhcCCC------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEPC------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.+....      ...+.+++.||+|||+++++|+||+|+|  |+++.++.++++|||++........
T Consensus        79 lv~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~N--il~~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06640          79 IIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAAN--VLLSEQGDVKLADFGVAGQLTDTQI  156 (277)
T ss_pred             EEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhh--EEEcCCCCEEEcccccceeccCCcc
Confidence            4678999998888665321      2345677899999999999999999999  9999999999999999976543221


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALM  154 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li  154 (251)
                       ......++..|+|||++.+..++.++|+||||+++|||++ |..||.+.........+ .....+..+..++..+.+++
T Consensus       157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li  233 (277)
T cd06640         157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAK-GEPPNSDMHPMRVLFLI-PKNNPPTLTGEFSKPFKEFI  233 (277)
T ss_pred             -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHH-CCCCCCCcChHhHhhhh-hcCCCCCCchhhhHHHHHHH
Confidence             2223456778999999988889999999999999999999 99999877665554443 23334444556788999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         155 RQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       155 ~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .+||..+|++||++.+++.+.+....
T Consensus       234 ~~~l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         234 DACLNKDPSFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             HHHcccCcccCcCHHHHHhChHhhhc
Confidence            99999999999999999998765443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.96  E-value=2.4e-29  Score=214.35  Aligned_cols=151  Identities=15%  Similarity=0.155  Sum_probs=119.1

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC-CCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~   99 (251)
                      .++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....    .....++..|+|||++.+ ..++.
T Consensus       122 ~i~~qi~~aL~~LH~~~ivHrdikp~N--il~~~~~~~kl~Dfg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~  195 (343)
T cd07878         122 FLIYQLLRGLKYIHSAGIIHRDLKPSN--VAVNEDCELRILDFGLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQ  195 (343)
T ss_pred             HHHHHHHHHHHHHHHCCeecccCChhh--EEECCCCCEEEcCCccceecCCC----cCCccccccccCchHhcCCccCCc
Confidence            456788999999999999999999999  99999999999999999875432    233467888999999876 46889


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-----------------------CC------CCCCCcHHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-----------------------LP------RPEACPVEV  150 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-----------------------~~------~~~~~~~~~  150 (251)
                      ++||||+||++|+|++ |..||.+.+..+....+......                       .+      .....++.+
T Consensus       196 ~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (343)
T cd07878         196 TVDIWSVGCIMAELLK-GKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLA  274 (343)
T ss_pred             hhhhHhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHH
Confidence            9999999999999999 99999876554433332211000                       00      002345678


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+++.+||..||++|||+.+++.|-+-.
T Consensus       275 ~~li~~mL~~dp~~R~s~~ell~hp~~~  302 (343)
T cd07878         275 IDLLEKMLVLDSDKRISASEALAHPYFS  302 (343)
T ss_pred             HHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence            8999999999999999999999986543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.96  E-value=2.1e-29  Score=209.02  Aligned_cols=171  Identities=20%  Similarity=0.293  Sum_probs=130.5

Q ss_pred             cccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .+||++.++|.+.....           +...+.+++.||.|||+.+|+||||||+|  |+++.++.+||+|||+++...
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~n--ili~~~~~~kl~dfg~~~~~~  175 (286)
T cd06638          98 VLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNN--ILLTTEGGVKLVDFGVSAQLT  175 (286)
T ss_pred             EEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHh--EEECCCCCEEEccCCceeecc
Confidence            57888888877643211           11255678899999999999999999999  999999999999999988654


Q ss_pred             CCceeecCCCCcCcccCCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCC
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKH-----NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPE  144 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~  144 (251)
                      .... ......++..|+|||++..     ..++.++||||+||++|||++ |..||...........+.... .....+.
T Consensus       176 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  253 (286)
T cd06638         176 STRL-RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGD-GDPPLADLHPMRALFKIPRNPPPTLHQPE  253 (286)
T ss_pred             cCCC-ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhc-CCCCCCCCchhHHHhhccccCCCcccCCC
Confidence            3221 2233467888999999853     347889999999999999999 999998765544333322111 1222344


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .++.++.+++.+||+.+|++|||+.+++++++
T Consensus       254 ~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~  285 (286)
T cd06638         254 LWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF  285 (286)
T ss_pred             CcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence            57789999999999999999999999998864

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.96  E-value=2.9e-29  Score=204.78  Aligned_cols=169  Identities=21%  Similarity=0.314  Sum_probs=136.3

Q ss_pred             cccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||.+.++|.+.+....       ..++.+++.||+|||+.+|+|+||+|+|  |+++.++.+||+|||++....... 
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~n--i~~~~~~~~kl~d~~~~~~~~~~~-  156 (258)
T cd06632          80 FLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGAN--ILVDTNGVVKLADFGMAKQVVEFS-  156 (258)
T ss_pred             EEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEECCCCCEEEccCccceeccccc-
Confidence            578888888877654322       1346678899999999999999999999  999999999999999988744332 


Q ss_pred             eecCCCCcCcccCCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       ......++..|++||.+.... ++.++|+||||+++|++++ |..||......+....+.........+..++..+.++
T Consensus       157 -~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  234 (258)
T cd06632         157 -FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMAT-GKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDF  234 (258)
T ss_pred             -cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHh-CCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHH
Confidence             223456778899999987766 8899999999999999999 9999987665555544443344455567788999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +.+||..+|++||++.+++.+-
T Consensus       235 i~~~l~~~p~~Rp~~~~~l~~~  256 (258)
T cd06632         235 ILKCLQRDPSLRPTAAELLEHP  256 (258)
T ss_pred             HHHHhhcCcccCcCHHHHhcCC
Confidence            9999999999999999998763

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=2.3e-29  Score=218.20  Aligned_cols=156  Identities=15%  Similarity=0.082  Sum_probs=120.4

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~   99 (251)
                      .++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++....... .......||..|+|||++.+..++.
T Consensus       189 ~i~~ql~~aL~~LH~~givHrDlkp~N--ill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  266 (392)
T PHA03207        189 TIQRRLLEALAYLHGRGIIHRDVKTEN--IFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCA  266 (392)
T ss_pred             HHHHHHHHHHHHHHHCCccccCCCHHH--EEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCc
Confidence            456788899999999999999999999  9999999999999999986543322 2223457899999999999888999


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChh---HHHHHHHhc-------------------------CCCC--CCC-----C
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGM---QILQKIDRE-------------------------GERL--PRP-----E  144 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~---~~~~~i~~~-------------------------~~~~--~~~-----~  144 (251)
                      ++||||+||++|||++ |..||.+....   ..+..+...                         ..+.  ..+     .
T Consensus       267 ~~DvwslGvil~el~~-g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (392)
T PHA03207        267 KTDIWSAGLVLFEMSV-KNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKY  345 (392)
T ss_pred             hhhHHHHHHHHHHHHH-CCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhcc
Confidence            9999999999999999 99999764321   111111110                         0000  011     2


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ..+.++.+++.+||..||++|||+.+++.|.+...
T Consensus       346 ~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~  380 (392)
T PHA03207        346 GMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK  380 (392)
T ss_pred             CcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence            34667889999999999999999999999976543

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.96  E-value=2.2e-29  Score=206.77  Aligned_cols=171  Identities=17%  Similarity=0.244  Sum_probs=134.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||+.+|+|+||+|+|  |+++.++.+||+|||++.......
T Consensus        79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~n--il~~~~~~~~l~dfg~~~~~~~~~  156 (265)
T cd06631          79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNN--VMLMPNGIIKLIDFGCARRLAWVG  156 (265)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHh--EEECCCCeEEeccchhhHhhhhcc
Confidence            357888888887765432       12356778899999999999999999999  999999999999999987642111


Q ss_pred             -----eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-CCCCCCCCCCc
Q psy2787          74 -----YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GERLPRPEACP  147 (251)
Q Consensus        74 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~  147 (251)
                           ........++..|+|||++.+..++.++|+||+|+++|++++ |..||...+.......+... ...+..+..++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (265)
T cd06631         157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMAT-GKPPLASMDRLAAMFYIGAHRGLMPRLPDSFS  235 (265)
T ss_pred             ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHh-CCCccccCChHHHHHHhhhccCCCCCCCCCCC
Confidence                 111223457888999999998888999999999999999999 99999876554433333222 33345567789


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      .++.+++.+||..+|++||++.+++.+
T Consensus       236 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~  262 (265)
T cd06631         236 AAAIDFVTSCLTRDQHERPSALQLLRH  262 (265)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence            999999999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.96  E-value=4.1e-29  Score=209.53  Aligned_cols=173  Identities=16%  Similarity=0.246  Sum_probs=133.7

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+....       ...+.+++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N--Ill~~~~~~~l~dfg~~~~~~~~~  155 (305)
T cd05609          78 MVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDN--LLITSMGHIKLTDFGLSKIGLMSL  155 (305)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHH--EEECCCCCEEEeeCCCccccCcCc
Confidence            3578998888887764432       2345677799999999999999999999  999999999999999987421110


Q ss_pred             --------------eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC
Q psy2787          74 --------------YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER  139 (251)
Q Consensus        74 --------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~  139 (251)
                                    ........++..|+|||++.+..++.++|+||||+++||+++ |..||.+....++...+......
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~-g~~pf~~~~~~~~~~~~~~~~~~  234 (305)
T cd05609         156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV-GCVPFFGDTPEELFGQVISDDIE  234 (305)
T ss_pred             cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcccC
Confidence                          001112356778999999988889999999999999999999 99999988777777766444333


Q ss_pred             CCC-CCCCcHHHHHHHHHHhccCCCCCCCH---HHHHHHHH
Q psy2787         140 LPR-PEACPVEVYALMRQCWSKNPAERPKF---STLKDCLY  176 (251)
Q Consensus       140 ~~~-~~~~~~~~~~li~~cl~~dP~~Rps~---~~il~~l~  176 (251)
                      .+. ...++.++.+++.+||+.+|++||++   .+++++.+
T Consensus       235 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~  275 (305)
T cd05609         235 WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRF  275 (305)
T ss_pred             CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCcc
Confidence            222 23578899999999999999999985   55555543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=2.3e-29  Score=208.90  Aligned_cols=171  Identities=18%  Similarity=0.320  Sum_probs=132.9

Q ss_pred             CcccccchhHHHHHhcCC----------CCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP----------CRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~----------~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      +.+||++.++|...+...          ...++.+++.||.|||+ .+|+||||||+|  |+++.++.+||+|||++...
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~n--il~~~~~~~~l~dfg~~~~~  153 (286)
T cd06622          76 MCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTN--VLVNGNGQVKLCDFGVSGNL  153 (286)
T ss_pred             EEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHH--EEECCCCCEEEeecCCcccc
Confidence            357899888887765542          13345667799999997 599999999999  99999999999999998765


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCC------CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHH--hcCCCCC
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQ------FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKID--REGERLP  141 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~------~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~--~~~~~~~  141 (251)
                      ...   ......++..|+|||++.+..      ++.++|+||+||++|+|++ |..||...........+.  ..+....
T Consensus       154 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  229 (286)
T cd06622         154 VAS---LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMAL-GRYPYPPETYANIFAQLSAIVDGDPPT  229 (286)
T ss_pred             cCC---ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHh-CCCCCCCcchhhHHHHHHHHhhcCCCC
Confidence            332   122345677899999986543      4789999999999999999 999997655444333221  2334445


Q ss_pred             CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         142 RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .+..++.++.+++.+||..+|++||++.+++.+.+.
T Consensus       230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~  265 (286)
T cd06622         230 LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWL  265 (286)
T ss_pred             CCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhh
Confidence            566789999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.96  E-value=7.2e-29  Score=204.09  Aligned_cols=170  Identities=14%  Similarity=0.234  Sum_probs=134.3

Q ss_pred             cccccchhHHHHHhcC---C--------CCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           2 SANFAELNAFQENYTE---P--------CRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~---~--------~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      .+||.+.++|.+....   .        ...++.+++.||.|||+ .+|+|+||+|+|  |+++.++.+||+|||++...
T Consensus        87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~n--il~~~~~~~~l~dfg~~~~~  164 (269)
T cd08528          87 VMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNN--IMLGEDDKVTITDFGLAKQK  164 (269)
T ss_pred             EEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHH--EEECCCCcEEEecccceeec
Confidence            5678766666554321   1        12345578899999996 789999999999  99999999999999999875


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      ....  ......++..|++||++.+..++.++|+||||+++|++++ |..||...........+......+.....++..
T Consensus       165 ~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (269)
T cd08528         165 QPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCT-LQPPFYSTNMLSLATKIVEAVYEPLPEGMYSED  241 (269)
T ss_pred             cccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHh-CCCcccccCHHHHHHHHhhccCCcCCcccCCHH
Confidence            4432  2334567788999999998889999999999999999999 999998776666666554433333233367889


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+++.+||+.||++||++.++..+++
T Consensus       242 l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         242 VTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            999999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.96  E-value=2.1e-29  Score=206.12  Aligned_cols=169  Identities=18%  Similarity=0.291  Sum_probs=137.9

Q ss_pred             CcccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhh-----hCCcccCCCCCCCceEEEccCCceEEccCC
Q psy2787           1 MSANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFS-----VNNICSCQFSSSSLLILFFSSSSSSSGDFG   64 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH-----~~~iiHrdlkp~ni~il~~~~~~~kl~DFG   64 (251)
                      +.+||++.++|.+.+...           ....+.+++.||+|||     +.+|+|+||+|+|  |+++.++.+||+|||
T Consensus        78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~n--ili~~~~~~kl~d~g  155 (265)
T cd08217          78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPAN--IFLDANNNVKLGDFG  155 (265)
T ss_pred             EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHH--EEEecCCCEEEeccc
Confidence            357888887777655321           1234667889999999     9999999999999  999999999999999


Q ss_pred             CCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q psy2787          65 MMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE  144 (251)
Q Consensus        65 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  144 (251)
                      ++........ ......++..|+|||++.+..++.++|+||||+++|+|++ |..||...+...+...+ ..+.....+.
T Consensus       156 ~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~-~~~~~~~~~~  232 (265)
T cd08217         156 LAKILGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCA-LSPPFTARNQLQLASKI-KEGKFRRIPY  232 (265)
T ss_pred             ccccccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHH-CCCcccCcCHHHHHHHH-hcCCCCCCcc
Confidence            9987544322 1223457888999999998888999999999999999999 99999887766666655 3444445667


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      ..+.++.+++.+||+.+|++||++.+|+++
T Consensus       233 ~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~  262 (265)
T cd08217         233 RYSSELNEVIKSMLNVDPDKRPSTEELLQL  262 (265)
T ss_pred             ccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence            788999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.96  E-value=1.3e-29  Score=210.00  Aligned_cols=170  Identities=10%  Similarity=0.158  Sum_probs=132.4

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||++.++|.+++...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++....... 
T Consensus        75 v~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~N--il~~~~~~~~l~dfg~~~~~~~~~-  151 (279)
T cd05633          75 ILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPAN--ILLDEHGHVRISDLGLACDFSKKK-  151 (279)
T ss_pred             EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHH--EEECCCCCEEEccCCcceeccccC-
Confidence            57999999987765422       23356778899999999999999999999  999999999999999987643321 


Q ss_pred             eecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh--HHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM--QILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                        .....++..|+|||.+.+ ..++.++|+||+||++|+|++ |..||......  ...... ........+..++.++.
T Consensus       152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  227 (279)
T cd05633         152 --PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLR-GHSPFRQHKTKDKHEIDRM-TLTVNVELPDSFSPELK  227 (279)
T ss_pred             --ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHh-CCCCcCCCCCcCHHHHHHH-hhcCCcCCccccCHHHH
Confidence              223467888999999864 557899999999999999999 99999754321  112221 12233445567889999


Q ss_pred             HHHHHHhccCCCCCC-----CHHHHHHHHHhh
Q psy2787         152 ALMRQCWSKNPAERP-----KFSTLKDCLYRL  178 (251)
Q Consensus       152 ~li~~cl~~dP~~Rp-----s~~~il~~l~~~  178 (251)
                      +++.+||..||++|+     ++.++++|.+..
T Consensus       228 ~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~  259 (279)
T cd05633         228 SLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFK  259 (279)
T ss_pred             HHHHHHhcCCHHHhcCCCCCCHHHHHhCcccc
Confidence            999999999999999     599999886543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.8e-29  Score=207.01  Aligned_cols=174  Identities=18%  Similarity=0.287  Sum_probs=136.6

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...        +..++.|++.||.|||+++|+|+||+|+|  |+++.++.++|+|||++......
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~n--ili~~~~~~~l~d~g~~~~~~~~  156 (280)
T cd06611          79 ILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGN--ILLTLDGDVKLADFGVSAKNKST  156 (280)
T ss_pred             EEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhh--EEECCCCCEEEccCccchhhccc
Confidence            357899888887765432        23466778899999999999999999999  99999999999999998764332


Q ss_pred             ceeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-CCCCCCCC
Q psy2787          73 CYVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-RLPRPEAC  146 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~  146 (251)
                      .. ......++..|++||++.     ...++.++|+||||+++|+|++ |..||.+.........+..... ....+..+
T Consensus       157 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (280)
T cd06611         157 LQ-KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQ-MEPPHHELNPMRVLLKILKSEPPTLDQPSKW  234 (280)
T ss_pred             cc-ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHh-CCCCcccCCHHHHHHHHhcCCCCCcCCcccC
Confidence            11 223345778899999875     3446789999999999999999 9999988776665555533221 22345678


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +.++.+++.+||..+|++||++.+++++-+-.
T Consensus       235 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~  266 (280)
T cd06611         235 SSSFNDFLKSCLVKDPDDRPTAAELLKHPFVS  266 (280)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHhcChhhc
Confidence            89999999999999999999999999986643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.96  E-value=2.7e-29  Score=206.27  Aligned_cols=170  Identities=19%  Similarity=0.261  Sum_probs=133.9

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||++.++|.++....       ...++.+++.||+|||+++|+|+||||+|  |+++.++.+||+|||+++.......
T Consensus        84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~n--il~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          84 FMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGAN--ILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH--EEecCCCCEEECcCccccccccccc
Confidence            57888888887765321       23456778899999999999999999999  9999999999999999886432111


Q ss_pred             --eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          75 --VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        75 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        .......++..|+|||++.+..++.++|+||||+++|++++ |..||...........+......+..+...+..+.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLT-EKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRD  240 (265)
T ss_pred             cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhh-CCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHH
Confidence              11223457778999999988888999999999999999999 999998765554444443344444455667788999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.+||. +|++||++++++++.
T Consensus       241 ~i~~~l~-~p~~Rp~~~~il~~~  262 (265)
T cd06652         241 FLKRIFV-EAKLRPSADELLRHT  262 (265)
T ss_pred             HHHHHhc-ChhhCCCHHHHhcCc
Confidence            9999995 999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>KOG1025|consensus

Probab=99.96  E-value=2.6e-29  Score=222.39  Aligned_cols=177  Identities=26%  Similarity=0.557  Sum_probs=155.4

Q ss_pred             CcccccchhHHHHHhcCCCCCC--------CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCRKP--------LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~--------~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      ++++|+++|.|+++.+..+.++        ..||++||.|||.+.++||||-..|  ||+.+...+|+.|||+++....+
T Consensus       774 lvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRN--VLVksP~hvkitdfgla~ll~~d  851 (1177)
T KOG1025|consen  774 LVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARN--VLVKSPNHVKITDFGLAKLLAPD  851 (1177)
T ss_pred             HHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhh--eeecCCCeEEEEecchhhccCcc
Confidence            3578999999999887665544        5677899999999999999999999  99999999999999999985433


Q ss_pred             c-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 C-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      . .........++.|||-|.+....|+.++|||||||++||++|+|..||.+....++...+ +.+.+++.|+.|+.+++
T Consensus       852 ~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dll-e~geRLsqPpiCtiDVy  930 (1177)
T KOG1025|consen  852 EKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLL-EKGERLSQPPICTIDVY  930 (1177)
T ss_pred             cccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHH-hccccCCCCCCccHHHH
Confidence            2 233445566778999999999999999999999999999999999999999988887766 67888999999999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .++.+||..|+..||+++++...+.+...
T Consensus       931 ~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  931 MVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             HHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            99999999999999999999988876543

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.96  E-value=3.9e-29  Score=209.99  Aligned_cols=172  Identities=19%  Similarity=0.246  Sum_probs=132.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...       ....+.|+++||.|||+ .+|+||||||+|  |+++.++.+||+|||++......
T Consensus        76 lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~n--il~~~~~~~~l~dfg~~~~~~~~  153 (308)
T cd06615          76 ICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSN--ILVNSRGEIKLCDFGVSGQLIDS  153 (308)
T ss_pred             EEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHH--EEEecCCcEEEccCCCccccccc
Confidence            457999988888876432       23456678899999997 589999999999  99999999999999998764332


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc----------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE----------------  136 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~----------------  136 (251)
                         ......++..|+|||++.+..++.++|+||||+++|+|++ |..||...+.......+...                
T Consensus       154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (308)
T cd06615         154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAI-GRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGH  229 (308)
T ss_pred             ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHh-CCCCCCCcchhhHHHhhcCccccccccCCcccccCC
Confidence               2234567888999999988888999999999999999999 99999765433322222110                


Q ss_pred             -------------------CCCCCCC-CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         137 -------------------GERLPRP-EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       137 -------------------~~~~~~~-~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                                         ...+..+ ..++.++.+++.+||..+|++|||+.+++.+.+-.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~  291 (308)
T cd06615         230 PPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIK  291 (308)
T ss_pred             CCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhh
Confidence                               0011111 23677899999999999999999999999997753

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.96  E-value=8.2e-29  Score=202.00  Aligned_cols=168  Identities=16%  Similarity=0.225  Sum_probs=134.6

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+....         ...+.+++.||+|||+++|+|+||+|+|  |+++.+ +.+||+|||++....
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n--il~~~~~~~~~l~d~~~~~~~~  153 (256)
T cd08220          76 IVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQN--ILLDKHKMVVKIGDFGISKILS  153 (256)
T ss_pred             EEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCCEEEEccCCCceecC
Confidence            3578888888877664322         2245677899999999999999999999  888755 468999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ...  ......++..|+|||.+.+..++.++||||||+++|+|++ |..||.+.+.......+.. ....+.+..++.++
T Consensus       154 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l  229 (256)
T cd08220         154 SKS--KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELAS-LKRAFEAANLPALVLKIMS-GTFAPISDRYSPDL  229 (256)
T ss_pred             CCc--cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHh-CCCCcccCchHHHHHHHHh-cCCCCCCCCcCHHH
Confidence            332  2223456778999999998888999999999999999999 9999988776666655533 33344556788999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      .+++.+||..+|++|||+.+++.+
T Consensus       230 ~~li~~~l~~~p~~Rpt~~~ll~~  253 (256)
T cd08220         230 RQLILSMLNLDPSKRPQLSQIMAQ  253 (256)
T ss_pred             HHHHHHHccCChhhCCCHHHHhhC
Confidence            999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.96  E-value=4.9e-29  Score=210.01  Aligned_cols=152  Identities=14%  Similarity=0.134  Sum_probs=112.3

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEE----ccCCceEEccCCCCcccCCCce--eecCCCCcCcccCCCcccCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILF----FSSSSSSSGDFGMMRYSQNDCY--VMTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~----~~~~~~kl~DFGla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~   94 (251)
                      .++.|++.||+|||++||+||||||+|  |++    +.++.+||+|||+++.......  .......+|+.|+|||++.+
T Consensus       112 ~i~~qi~~al~~LH~~~ivHrDlkp~N--il~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07868         112 SLLYQILDGIHYLHANWVLHRDLKPAN--ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             HHHHHHHHHHHHHHhCCEEcCCCCHHH--EEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcC
Confidence            356788999999999999999999999  887    4567899999999987543321  12234567889999999876


Q ss_pred             C-CCCchhHHHHHHHHHHHHHhCCCCCCCCCCh---------hHHHHHHHhc-CCC------------------------
Q psy2787          95 N-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNG---------MQILQKIDRE-GER------------------------  139 (251)
Q Consensus        95 ~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~---------~~~~~~i~~~-~~~------------------------  139 (251)
                      . .++.++||||+||++|+|++ |..||.+...         ......+... +..                        
T Consensus       190 ~~~~~~~~DiwslG~il~el~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (317)
T cd07868         190 ARHYTKAIDIWAIGCIFAELLT-SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN  268 (317)
T ss_pred             CCCcCchhhHHHHHHHHHHHHh-CCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhcc
Confidence            4 58899999999999999999 9999964321         0111111110 000                        


Q ss_pred             -C----------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         140 -L----------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       140 -~----------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                       .          ......+.++.+++.+||..||++|||++++++|-
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp  315 (317)
T cd07868         269 TYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDP  315 (317)
T ss_pred             ccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCC
Confidence             0          00012345688999999999999999999999874

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.96  E-value=8.6e-29  Score=202.79  Aligned_cols=169  Identities=21%  Similarity=0.353  Sum_probs=131.2

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||++.++|.+.....       ...++.+++.||+|||+.+|+|+||+|+|  |+++.++.+||+|||++........
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~n--il~~~~~~~kl~d~g~~~~~~~~~~  154 (264)
T cd06626          77 FMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPAN--IFLDHNGVIKLGDFGCAVKLKNNTT  154 (264)
T ss_pred             EEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEECCCCCEEEcccccccccCCCCC
Confidence            57888888888766543       12345678899999999999999999999  9999999999999999887543322


Q ss_pred             ee---cCCCCcCcccCCCcccCCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCCCCC--C
Q psy2787          75 VM---TERKPLPCPWCPMESLKHNQ---FSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLPRPE--A  145 (251)
Q Consensus        75 ~~---~~~~~~~~~y~aPE~~~~~~---~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~--~  145 (251)
                      ..   .....++..|+|||++.+..   .+.++||||||+++|++++ |..||..... ......+. .+..+..+.  .
T Consensus       155 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~-g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~  232 (264)
T cd06626         155 TMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMAT-GKRPWSELDNEFQIMFHVG-AGHKPPIPDSLQ  232 (264)
T ss_pred             cccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHh-CCCCccCCcchHHHHHHHh-cCCCCCCCcccc
Confidence            11   12345677899999998766   7899999999999999999 9999976532 23333332 233333343  3


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      ++..+.+++.+||+.+|++||++.+++.+
T Consensus       233 ~~~~~~~li~~~l~~~p~~R~~~~~i~~~  261 (264)
T cd06626         233 LSPEGKDFLDRCLESDPKKRPTASELLQH  261 (264)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            48899999999999999999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0579|consensus

Probab=99.96  E-value=1.5e-29  Score=218.94  Aligned_cols=173  Identities=20%  Similarity=0.266  Sum_probs=141.0

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |..|||..|.+-..+-+-        ....-.+++.||.|||+++|||||||..|  ||++-+|.++|+|||.+..... 
T Consensus       106 iliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGN--iL~TldGdirLADFGVSAKn~~-  182 (1187)
T KOG0579|consen  106 ILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGN--ILLTLDGDIRLADFGVSAKNKS-  182 (1187)
T ss_pred             EEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccc--eEEEecCcEeeecccccccchh-
Confidence            346888888877654321        11223456789999999999999999999  9999999999999999865332 


Q ss_pred             ceeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCC
Q psy2787          73 CYVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEAC  146 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~  146 (251)
                      ......+..||+.|||||+..     ..+|+.++||||||++|.||.- +.+|....+.+..+-+|.... ..+-.|.++
T Consensus       183 t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAq-iEPPHhelnpMRVllKiaKSePPTLlqPS~W  261 (1187)
T KOG0579|consen  183 TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQ-IEPPHHELNPMRVLLKIAKSEPPTLLQPSHW  261 (1187)
T ss_pred             HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhc-cCCCccccchHHHHHHHhhcCCCcccCcchh
Confidence            223456789999999999864     5679999999999999999999 999999999888877775432 223456789


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +..+.+++.+||.+||..||++.++++|.+.
T Consensus       262 s~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv  292 (1187)
T KOG0579|consen  262 SRSFSDFLKRCLVKNPRNRPPAAQLLKHPFV  292 (1187)
T ss_pred             hhHHHHHHHHHHhcCCccCCCHHHHhhCccc
Confidence            9999999999999999999999999998653

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.96  E-value=8.3e-29  Score=207.84  Aligned_cols=150  Identities=17%  Similarity=0.256  Sum_probs=120.8

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccC---CCCCC
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLK---HNQFS   98 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~   98 (251)
                      .+.|++.||.|||+.+|+||||+|+|  |+++.++.+||+|||++......     ....++..|+|||++.   ...++
T Consensus       120 ~~~ql~~~L~~LH~~~i~H~dl~p~n--Il~~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~  192 (307)
T cd06607         120 ICHGALQGLAYLHSHERIHRDIKAGN--ILLTEPGTVKLADFGSASLVSPA-----NSFVGTPYWMAPEVILAMDEGQYD  192 (307)
T ss_pred             HHHHHHHHHHHHHHCCceecCCCccc--EEECCCCCEEEeecCcceecCCC-----CCccCCccccCceeeeccCCCCCC
Confidence            45678899999999999999999999  99999999999999998764332     2345677899999874   35578


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .++||||||+++|||++ |..||.+.+.......+.........+..++..+.+++.+||..+|++||++.+++.+.+..
T Consensus       193 ~~sDv~s~G~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~  271 (307)
T cd06607         193 GKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL  271 (307)
T ss_pred             cccchHHHHHHHHHHHc-CCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence            89999999999999999 99999887665554444322222222345788999999999999999999999999987654


Q ss_pred             c
Q psy2787         179 T  179 (251)
Q Consensus       179 ~  179 (251)
                      .
T Consensus       272 ~  272 (307)
T cd06607         272 R  272 (307)
T ss_pred             c
Confidence            3

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.96  E-value=4.2e-29  Score=207.53  Aligned_cols=171  Identities=16%  Similarity=0.254  Sum_probs=134.5

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||++.++|.+.+...      ...++.+++.||+|||+++|+||||+|+|  |+++.++.++|+|||++........ 
T Consensus        94 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~~l~d~g~~~~~~~~~~-  170 (285)
T cd06648          94 VMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDS--ILLTSDGRVKLSDFGFCAQVSKEVP-  170 (285)
T ss_pred             EEeccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhh--EEEcCCCcEEEcccccchhhccCCc-
Confidence            46888888887765542      12356778899999999999999999999  9999999999999998876433211 


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-CCCCCCCcHHHHHHH
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-LPRPEACPVEVYALM  154 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~li  154 (251)
                      ......++..|+|||++.+..++.++|+||||+++|+|++ |..||.+.+.......+...... ...+..++..+.+++
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  249 (285)
T cd06648         171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVD-GEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFL  249 (285)
T ss_pred             ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHh-CCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHH
Confidence            1223457788999999988888999999999999999999 99999877666665555333111 112234788999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHH
Q psy2787         155 RQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       155 ~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+||..+|++||++.+++++-+
T Consensus       250 ~~~l~~~p~~Rpt~~~il~~~~  271 (285)
T cd06648         250 DRMLVRDPAQRATAAELLNHPF  271 (285)
T ss_pred             HHHcccChhhCcCHHHHccCcc
Confidence            9999999999999999998643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.96  E-value=3.2e-29  Score=204.66  Aligned_cols=170  Identities=16%  Similarity=0.234  Sum_probs=138.5

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||+..++|.+......         ...+.+++.|++|||+++++|+||+|+|  |+++.++.++|+|||++.....
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~n--il~~~~~~~~l~d~~~~~~~~~  153 (256)
T cd08218          76 IVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQN--IFLTKDGTIKLGDFGIARVLNS  153 (256)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH--EEEcCCCCEEEeeccceeecCc
Confidence            3578888888887654322         2345678899999999999999999999  9999999999999999986543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ... ......++..|+|||++.+..++.++|+||||+++|++++ |..||......+....+. .+...+.+..++.++.
T Consensus       154 ~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~-g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  230 (256)
T cd08218         154 TVE-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCT-LKHAFEAGNMKNLVLKII-RGSYPPVSSHYSYDLR  230 (256)
T ss_pred             chh-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHc-CCCCccCCCHHHHHHHHh-cCCCCCCcccCCHHHH
Confidence            321 1123356778999999998888999999999999999999 999998777766666654 3444555677889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +++.+||..+|++||++.+++++-
T Consensus       231 ~li~~~l~~~p~~Rp~~~~vl~~~  254 (256)
T cd08218         231 NLVSQLFKRNPRDRPSVNSILEKN  254 (256)
T ss_pred             HHHHHHhhCChhhCcCHHHHhhCc
Confidence            999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.96  E-value=3.7e-29  Score=209.15  Aligned_cols=173  Identities=16%  Similarity=0.248  Sum_probs=135.9

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||++.++|.......      ....+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++........ 
T Consensus        96 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~N--ill~~~~~~kL~dfg~~~~~~~~~~-  172 (297)
T cd06659          96 LMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDS--ILLTLDGRVKLSDFGFCAQISKDVP-  172 (297)
T ss_pred             EEecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--eEEccCCcEEEeechhHhhcccccc-
Confidence            57888887777654331      23356678899999999999999999999  9999999999999999876433221 


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-CCCCCCCcHHHHHHH
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-LPRPEACPVEVYALM  154 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~li  154 (251)
                      ......++..|+|||++.+..++.++||||||+++|||++ |..||......+....+...... .......+..+.+++
T Consensus       173 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i  251 (297)
T cd06659         173 KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFL  251 (297)
T ss_pred             cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHH
Confidence            2233567888999999998889999999999999999999 99999877665555554322111 122345788999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         155 RQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       155 ~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+||..+|++||++.+++++....
T Consensus       252 ~~~l~~~P~~Rps~~~ll~~~~~~  275 (297)
T cd06659         252 ERMLTREPQERATAQELLDHPFLL  275 (297)
T ss_pred             HHHhcCCcccCcCHHHHhhChhhc
Confidence            999999999999999999986544

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.96  E-value=3.2e-29  Score=207.56  Aligned_cols=169  Identities=11%  Similarity=0.143  Sum_probs=133.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||+..++|...+...       ...++.|+++||+|||+.+|+||||||+|  |+++.++.+||+|||++...... 
T Consensus        74 ~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~n--ili~~~~~~kl~dfg~~~~~~~~-  150 (278)
T cd05606          74 FILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPAN--ILLDEHGHVRISDLGLACDFSKK-  150 (278)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHH--EEECCCCCEEEccCcCccccCcc-
Confidence            357899988888766432       23356678899999999999999999999  99999999999999998764332 


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCC---hhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLN---GMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                        ......++..|+|||++.++ .++.++||||+|+++|+|++ |..||.+..   ........  .......+..++.+
T Consensus       151 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~-g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~  225 (278)
T cd05606         151 --KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFSPE  225 (278)
T ss_pred             --CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHh-CCCCCCCCCccchHHHHHHh--hccCCCCCCcCCHH
Confidence              12334678889999998754 58899999999999999999 999997653   22222222  22344455667899


Q ss_pred             HHHHHHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         150 VYALMRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      +.+++.+|+..+|++||     ++.+++++.+.
T Consensus       226 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~  258 (278)
T cd05606         226 LRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFF  258 (278)
T ss_pred             HHHHHHHHhhcCHHhccCCCCCCHHHHHhCccc
Confidence            99999999999999999     99999876544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.96  E-value=5.2e-29  Score=207.36  Aligned_cols=170  Identities=19%  Similarity=0.233  Sum_probs=130.1

Q ss_pred             cccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .+||.+.++|.+.....           ....+.+++.||+|||+.+|+||||||+|  |+++.++.+||+|||++....
T Consensus       102 v~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~n--ili~~~~~~kl~dfg~~~~~~  179 (291)
T cd06639         102 VLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNN--ILLTTEGGVKLVDFGVSAQLT  179 (291)
T ss_pred             EEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH--EEEcCCCCEEEeecccchhcc
Confidence            57888888777654321           12245677899999999999999999999  999999999999999988644


Q ss_pred             CCceeecCCCCcCcccCCCcccCCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-CCCCCC
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHN-----QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-RLPRPE  144 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~  144 (251)
                      .... ......++..|+|||++...     .++.++|||||||++|+|++ |+.||...........+..... ....+.
T Consensus       180 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  257 (291)
T cd06639         180 STRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGD-GDPPLFDMHPVKTLFKIPRNPPPTLLHPE  257 (291)
T ss_pred             cccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhh-CCCCCCCCcHHHHHHHHhcCCCCCCCccc
Confidence            3221 12234577889999998643     25789999999999999999 9999987765444444422211 122344


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ..+..+.+++.+||+.+|++||++.++++|-
T Consensus       258 ~~~~~l~~li~~~l~~~p~~Rps~~~il~~~  288 (291)
T cd06639         258 KWCRSFNHFISQCLIKDFEARPSVTHLLEHP  288 (291)
T ss_pred             ccCHHHHHHHHHHhhcChhhCcCHHHHhcCc
Confidence            5777899999999999999999999999874

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.96  E-value=6.4e-29  Score=210.37  Aligned_cols=174  Identities=17%  Similarity=0.192  Sum_probs=126.1

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.+++.+.+...         ...++.|++.||+|||+++|+||||||+|  |+++.++.++++|||.+.....
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~N--il~~~~~~~~l~~~~~~~~~~~  153 (327)
T cd08227          76 VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASH--ILISVDGKVYLSGLRSNLSMIN  153 (327)
T ss_pred             EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhh--EEEecCCcEEEcccchhhcccc
Confidence            357888888887765321         12355678899999999999999999999  9999999999999987554221


Q ss_pred             Ccee------ecCCCCcCcccCCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC----
Q psy2787          72 DCYV------MTERKPLPCPWCPMESLKH--NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER----  139 (251)
Q Consensus        72 ~~~~------~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~----  139 (251)
                      ....      ......++..|+|||++.+  ..++.++|||||||++|||++ |..||......+...........    
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  232 (327)
T cd08227         154 HGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN-GHVPFKDMPATQMLLEKLNGTVPCLLD  232 (327)
T ss_pred             ccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHH-CCCCCCCcchhHHHHHHhcCCcccccc
Confidence            1100      0112345667999999876  358899999999999999999 99999865543322221111000    


Q ss_pred             ----------------------------------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         140 ----------------------------------------LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       140 ----------------------------------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                                              .+....+++.+.+++.+||..||++|||++++++|.+-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f  310 (327)
T cd08227         233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF  310 (327)
T ss_pred             ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhh
Confidence                                                    00112346789999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.96  E-value=6e-29  Score=204.79  Aligned_cols=168  Identities=13%  Similarity=0.224  Sum_probs=132.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...       ...++.|+++||+|||+.+|+||||||+|  |+++.++ .++|+|||++......
T Consensus        86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~n--il~~~~~~~~~l~dfg~~~~~~~~  163 (267)
T PHA03390         86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLEN--VLYDRAKDRIYLCDYGLCKIIGTP  163 (267)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH--EEEeCCCCeEEEecCccceecCCC
Confidence            467999999998876543       13456778899999999999999999999  9999888 9999999998765433


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHH-HHH-HhcCCCCCCCCCCcHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQIL-QKI-DREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~-~~i-~~~~~~~~~~~~~~~~~  150 (251)
                           ....++..|+|||++.+..++.++||||+|+++|+|++ |..||.......+. ..+ .......+.+..+++.+
T Consensus       164 -----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (267)
T PHA03390        164 -----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLT-GKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNA  237 (267)
T ss_pred             -----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHH
Confidence                 22356788999999998889999999999999999999 99999765433211 111 11122334445789999


Q ss_pred             HHHHHHHhccCCCCCCC-HHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPK-FSTLKDCLY  176 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps-~~~il~~l~  176 (251)
                      .+++.+||+.+|.+|++ ++++++|-+
T Consensus       238 ~~li~~~l~~~p~~R~~~~~~~l~h~~  264 (267)
T PHA03390        238 NDFVQSMLKYNINYRLTNYNEIIKHPF  264 (267)
T ss_pred             HHHHHHHhccChhhCCchHHHHhcCCc
Confidence            99999999999999995 699987643

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.96  E-value=6.4e-29  Score=207.92  Aligned_cols=171  Identities=15%  Similarity=0.154  Sum_probs=128.5

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++ +++.+.....        ...++.|+++||+|||+++|+|+||||+|  |+++.++.+||+|||++.......
T Consensus        82 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~N--il~~~~~~~kl~dfg~~~~~~~~~  158 (301)
T cd07873          82 VFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQN--LLINERGELKLADFGLARAKSIPT  158 (301)
T ss_pred             EEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHH--EEECCCCcEEECcCcchhccCCCC
Confidence            567876 4666654332        22345688899999999999999999999  999999999999999997643322


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC--------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE--------------  138 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~--------------  138 (251)
                      . ......++..|+|||++.+. .++.++||||+|+++|+|++ |..||.+.+..+....+...-.              
T Consensus       159 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (301)
T cd07873         159 K-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMST-GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNE  236 (301)
T ss_pred             C-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccc
Confidence            1 12234567789999988653 47889999999999999999 9999988765544433221100              


Q ss_pred             -----CCC---------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         139 -----RLP---------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       139 -----~~~---------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                           ..+         ....++..+.+++.+|+..||.+|||+.++++|.+.
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f  289 (301)
T cd07873         237 EFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYF  289 (301)
T ss_pred             cccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence                 000         113467889999999999999999999999997654

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.96  E-value=8.1e-29  Score=205.35  Aligned_cols=170  Identities=15%  Similarity=0.107  Sum_probs=125.4

Q ss_pred             CcccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      +++||+. +++.+.+....          ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++....
T Consensus        76 ~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~n--il~~~~~~~~l~dfg~~~~~~  152 (285)
T cd07861          76 LIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQN--LLIDNKGVIKLADFGLARAFG  152 (285)
T ss_pred             EEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHH--EEEcCCCcEEECcccceeecC
Confidence            3578876 45655443211          2246788899999999999999999999  999999999999999987643


Q ss_pred             CCceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-----------
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-----------  138 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-----------  138 (251)
                      ... .......++..|+|||++.+. .++.++||||||+++|+|++ |..||.+.........+.....           
T Consensus       153 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
T cd07861         153 IPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMAT-KKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVT  230 (285)
T ss_pred             CCc-ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHhCCCChhhhhcch
Confidence            321 122334567789999988654 46889999999999999999 9999987654332221111000           


Q ss_pred             ----------------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         139 ----------------RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       139 ----------------~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                                      .......++.++.+++.+||..||++|||+.+++.+-
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~  283 (285)
T cd07861         231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHP  283 (285)
T ss_pred             hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCC
Confidence                            0001234788999999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG1024|consensus

Probab=99.96  E-value=9.1e-29  Score=203.51  Aligned_cols=158  Identities=25%  Similarity=0.532  Sum_probs=139.8

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee-ecCCCCcCcccCCCcccCCCCCCch
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV-MTERKPLPCPWCPMESLKHNQFSQA  100 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  100 (251)
                      ...|+..|++|||+.+|||.||-..|  +++++...+||+|=.++|.+-...+. .......+..||+||.+.+..|+.+
T Consensus       401 masQla~am~hlh~~~ViHkDiAaRN--CvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssa  478 (563)
T KOG1024|consen  401 MASQLAMAMEHLHNHGVIHKDIAARN--CVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSA  478 (563)
T ss_pred             HHHHHHHHHHHHHhcCcccchhhhhc--ceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcch
Confidence            45677799999999999999999999  99999999999999999974333332 3344556778999999999999999


Q ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         101 SDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       101 ~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +|+||||+++|||++.|+.||...++.++...+ .+|++...|-+||.++..+|..||+..|++||++++++..|.+...
T Consensus       479 sDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl-kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~  557 (563)
T KOG1024|consen  479 SDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL-KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT  557 (563)
T ss_pred             hhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH-hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence            999999999999999999999999998887766 6899999999999999999999999999999999999999988765


Q ss_pred             HH
Q psy2787         181 AV  182 (251)
Q Consensus       181 ~~  182 (251)
                      ..
T Consensus       558 ql  559 (563)
T KOG1024|consen  558 QL  559 (563)
T ss_pred             HH
Confidence            44

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.96  E-value=1.7e-28  Score=206.88  Aligned_cols=170  Identities=16%  Similarity=0.248  Sum_probs=132.9

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||+. +++.+......        ...+.+++.||.|||+++|+||||+|+|  |+++.++.+||+|||++......
T Consensus       102 lv~e~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~N--il~~~~~~~kl~dfg~~~~~~~~  178 (317)
T cd06635         102 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGN--ILLTEPGQVKLADFGSASIASPA  178 (317)
T ss_pred             EEEeCCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCccc--EEECCCCCEEEecCCCccccCCc
Confidence            3567776 45554432211        2245677899999999999999999999  99999999999999998754322


Q ss_pred             ceeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                           ....++..|+|||++.   .+.++.++||||||+++|+|++ |..||...........+............++..
T Consensus       179 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (317)
T cd06635         179 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNESPTLQSNEWSDY  252 (317)
T ss_pred             -----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHh-CCCCCCCccHHHHHHHHHhccCCCCCCccccHH
Confidence                 2345677899999974   4567889999999999999999 999998876666566554444444444567889


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +.+++.+||+.+|++||++.+++.+++.+.
T Consensus       253 l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         253 FRNFVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             HHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence            999999999999999999999999876543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.96  E-value=4.5e-29  Score=204.68  Aligned_cols=172  Identities=17%  Similarity=0.253  Sum_probs=134.1

Q ss_pred             CcccccchhHHHHHhcCC----------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP----------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~----------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+...          ....+.|++.||+|||++||+|+||+|+|  |++++++.+||+|||++....
T Consensus        76 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~n--i~~~~~~~~~l~df~~~~~~~  153 (267)
T cd06610          76 LVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGN--ILLGEDGSVKIADFGVSASLA  153 (267)
T ss_pred             EEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHh--EEEcCCCCEEEcccchHHHhc
Confidence            357888888888766432          12346778899999999999999999999  999999999999999988744


Q ss_pred             CCcee---ecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-CCCC--
Q psy2787          71 NDCYV---MTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-LPRP--  143 (251)
Q Consensus        71 ~~~~~---~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~--  143 (251)
                      .....   ......++..|++||++... .++.++|+||||+++|+|++ |..||...+.......+...... ....  
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (267)
T cd06610         154 DGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELAT-GAAPYSKYPPMKVLMLTLQNDPPSLETGAD  232 (267)
T ss_pred             cCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHh-CCCCccccChhhhHHHHhcCCCCCcCCccc
Confidence            33211   22334577889999998876 68899999999999999999 99999877665555544332211 1111  


Q ss_pred             -CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         144 -EACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       144 -~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                       ..++.++.+++.+||..||++|||+.++++|-
T Consensus       233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p  265 (267)
T cd06610         233 YKKYSKSFRKMISLCLQKDPSKRPTAEELLKHK  265 (267)
T ss_pred             cccccHHHHHHHHHHcCCChhhCcCHHHHhhCC
Confidence             25678999999999999999999999999863

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0614|consensus

Probab=99.96  E-value=4.3e-29  Score=211.17  Aligned_cols=174  Identities=16%  Similarity=0.196  Sum_probs=148.0

Q ss_pred             CcccccchhHHHHHhcC------C-CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE------P-CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~------~-~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |-+|-|-.|++-+-+.+      . .+.+..-+..|++|||++|||+|||||+|  ++++.+|.+||.|||+|+.+....
T Consensus       497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPEN--llLd~~Gy~KLVDFGFAKki~~g~  574 (732)
T KOG0614|consen  497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPEN--LLLDNRGYLKLVDFGFAKKIGSGR  574 (732)
T ss_pred             hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhh--eeeccCCceEEeehhhHHHhccCC
Confidence            45666777776664332      2 23334445689999999999999999999  999999999999999999876653


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                        ++.+.+||+.|.|||++.+...+.++|.||+|+++||+++ |.+||.+.+++..+..|...-.....|..++....+|
T Consensus       575 --KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~-G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~L  651 (732)
T KOG0614|consen  575 --KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLT-GSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDL  651 (732)
T ss_pred             --ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHH
Confidence              5667899999999999999999999999999999999999 9999999999999999987766777888899999999


Q ss_pred             HHHHhccCCCCCCC-----HHHHHHHHHhhc
Q psy2787         154 MRQCWSKNPAERPK-----FSTLKDCLYRLT  179 (251)
Q Consensus       154 i~~cl~~dP~~Rps-----~~~il~~l~~~~  179 (251)
                      +.+++..+|.+|..     +.+|.+|-|..-
T Consensus       652 ik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  652 IKKLCRDNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             HHHHHhcCcHhhhccccCChHHHHhhhhhhc
Confidence            99999999999965     678888877543

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.96  E-value=2e-29  Score=210.78  Aligned_cols=172  Identities=17%  Similarity=0.248  Sum_probs=134.5

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.....      ...++.+++.||.|||+.+|+||||||+|  |+++.++.+||+|||++........
T Consensus        93 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~N--ili~~~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656          93 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDN--ILLGMDGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             EeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEECCCCCEEECcCccceEccCCcc
Confidence            357899888888876432      22345678899999999999999999999  9999999999999999876443321


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~l  153 (251)
                       ......++..|+|||.+.+..++.++|+||||+++|++++ |..||.+.+.......+...+ .....+...+..+.++
T Consensus       171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  248 (297)
T cd06656         171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDF  248 (297)
T ss_pred             -CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHH
Confidence             1233467778999999998889999999999999999999 999997765433222222111 1223345678899999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+||..+|++||++.+++++-+
T Consensus       249 i~~~l~~~p~~Rps~~~il~~~~  271 (297)
T cd06656         249 LNRCLEMDVDRRGSAKELLQHPF  271 (297)
T ss_pred             HHHHccCChhhCcCHHHHhcCch
Confidence            99999999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=5.3e-29  Score=203.91  Aligned_cols=167  Identities=15%  Similarity=0.188  Sum_probs=133.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +++||++.++|.+.+...       ...++.|++.||.|||+.+|+|+||+|+|  |+++.++.+||+|||+++....  
T Consensus        74 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~n--il~~~~~~~~l~dfg~~~~~~~--  149 (260)
T cd05611          74 LVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPEN--LLIDQTGHLKLTDFGLSRNGLE--  149 (260)
T ss_pred             EEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--eEECCCCcEEEeecccceeccc--
Confidence            357899888888765432       23456778899999999999999999999  9999999999999999876432  


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC--CCCCCCcHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL--PRPEACPVEVY  151 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~  151 (251)
                         .....++..|++||.+.+..++.++||||+|+++|++++ |..||...+..+....+.......  .....++.++.
T Consensus       150 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (260)
T cd05611         150 ---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLF-GYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAV  225 (260)
T ss_pred             ---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHH
Confidence               223456778999999988888999999999999999999 999998887777666654333222  23346889999


Q ss_pred             HHHHHHhccCCCCCCCH---HHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKF---STLKDCL  175 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~---~~il~~l  175 (251)
                      +++.+||+.+|++||++   .+++.|.
T Consensus       226 ~~i~~~l~~~p~~R~~~~~~~~~l~~~  252 (260)
T cd05611         226 DLINRLLCMDPAKRLGANGYQEIKSHP  252 (260)
T ss_pred             HHHHHHccCCHHHccCCCcHHHHHcCh
Confidence            99999999999999966   4555543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=4.3e-29  Score=205.51  Aligned_cols=171  Identities=19%  Similarity=0.263  Sum_probs=129.8

Q ss_pred             CcccccchhHHHHHhcCCC-----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+......           ..++.|++.||+|||+++|+|+||+|+|  |+++.++.+||+|||++...
T Consensus        86 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~n--i~~~~~~~~~l~d~~~~~~~  163 (275)
T cd06608          86 LVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQN--ILLTKNAEVKLVDFGVSAQL  163 (275)
T ss_pred             EEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHH--EEEccCCeEEECCCccceec
Confidence            3578888777766543211           2255678899999999999999999999  99999999999999998764


Q ss_pred             CCCceeecCCCCcCcccCCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-CCCCC
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKH-----NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-RLPRP  143 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~  143 (251)
                      .... .......++..|+|||++..     ..++.++||||||+++|++++ |..||...........+..... ....+
T Consensus       164 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  241 (275)
T cd06608         164 DSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELAD-GKPPLCDMHPMRALFKIPRNPPPTLKSP  241 (275)
T ss_pred             ccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHh-CCCCccccchHHHHHHhhccCCCCCCch
Confidence            4322 12234567888999998753     246788999999999999999 9999987655444444432221 11223


Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       144 ~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ..++.++.+++.+||..||++|||+.+++++-
T Consensus       242 ~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~  273 (275)
T cd06608         242 ENWSKKFNDFISECLIKNYEQRPFMEELLEHP  273 (275)
T ss_pred             hhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence            34778999999999999999999999998763

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.96  E-value=7.5e-29  Score=205.55  Aligned_cols=171  Identities=17%  Similarity=0.231  Sum_probs=129.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.+.+.......       ....+.|++.||+|||+.+|+||||||+|  |+++.++.+||+|||++.......
T Consensus        77 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~n--il~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07847          77 LVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPEN--ILITKQGQIKLCDFGFARILTGPG  154 (286)
T ss_pred             EEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhh--EEEcCCCcEEECccccceecCCCc
Confidence            357888887777654322       33456778899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC---------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG---------------  137 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~---------------  137 (251)
                      . ......++..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+....+....+....               
T Consensus       155 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T cd07847         155 D-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLT-GQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQ  232 (286)
T ss_pred             c-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccc
Confidence            1 1223346678999999876 457889999999999999999 999998776544333221100               


Q ss_pred             ----CCCCC----------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         138 ----ERLPR----------PEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       138 ----~~~~~----------~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                          ...+.          ....+..+.+++.+||..+|++||++.+++.|.
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~  284 (286)
T cd07847         233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHP  284 (286)
T ss_pred             ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCC
Confidence                00010          124577899999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.96  E-value=1e-28  Score=205.66  Aligned_cols=167  Identities=17%  Similarity=0.223  Sum_probs=137.5

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+....       ...+.|++.||+|||++||+|+||+|.|  |+++.++.+||+|||++...... 
T Consensus        78 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~n--ili~~~~~~kl~dfg~~~~~~~~-  154 (290)
T cd05580          78 LVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPEN--LLLDSDGYIKITDFGFAKRVKGR-  154 (290)
T ss_pred             EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH--EEECCCCCEEEeeCCCccccCCC-
Confidence            3678998888887764332       1235678899999999999999999999  99999999999999999875443 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         .....++..|+|||.+.+...+.++|+||||+++|+|++ |..||...........+..  ...+.+...+..+.++
T Consensus       155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~l  228 (290)
T cd05580         155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLA-GYPPFFDDNPIQIYEKILE--GKVRFPSFFSPDAKDL  228 (290)
T ss_pred             ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhc--CCccCCccCCHHHHHH
Confidence               234467788999999988888899999999999999999 9999988776666665542  3345566788999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHH
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~  176 (251)
                      +.+||..+|.+|+     ++.+++.|.+
T Consensus       229 i~~~l~~~p~~R~~~~~~~~~~l~~~~~  256 (290)
T cd05580         229 IRNLLQVDLTKRLGNLKNGVNDIKNHPW  256 (290)
T ss_pred             HHHHccCCHHHccCcccCCHHHHHcCcc
Confidence            9999999999999     7888887754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.96  E-value=9.1e-29  Score=211.94  Aligned_cols=152  Identities=14%  Similarity=0.202  Sum_probs=113.5

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCch
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQA  100 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  100 (251)
                      .++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......  ......||..|+|||++.+..++.+
T Consensus       161 ~i~~qi~~aL~~LH~~~ivHrDlkp~N--ill~~~~~~kl~DfG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~  236 (357)
T PHA03209        161 IIEKQILEGLRYLHAQRIIHRDVKTEN--IFINDVDQVCIGDLGAAQFPVVAP--AFLGLAGTVETNAPEVLARDKYNSK  236 (357)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHH--EEECCCCCEEEecCccccccccCc--ccccccccccccCCeecCCCCCCch
Confidence            456788899999999999999999999  999999999999999997533221  1234568889999999998889999


Q ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCChh----------HHHHHHHhcCCC---CC--------------------------
Q psy2787         101 SDAWMFGVTIWEMFTFGAEPWVGLNGM----------QILQKIDREGER---LP--------------------------  141 (251)
Q Consensus       101 ~Di~S~G~il~el~~~g~~pf~~~~~~----------~~~~~i~~~~~~---~~--------------------------  141 (251)
                      +|||||||++|||++++..+|......          .+...+...+..   .+                          
T Consensus       237 ~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (357)
T PHA03209        237 ADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYP  316 (357)
T ss_pred             hhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccH
Confidence            999999999999999555555432211          111111100000   00                          


Q ss_pred             --CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         142 --RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       142 --~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                        ....++.++.++|.+||+.||++|||+.++++|-+
T Consensus       317 ~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~  353 (357)
T PHA03209        317 CFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPM  353 (357)
T ss_pred             HHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCch
Confidence              00235567778999999999999999999998854

>KOG1035|consensus

Probab=99.96  E-value=9.6e-29  Score=226.39  Aligned_cols=164  Identities=18%  Similarity=0.294  Sum_probs=125.8

Q ss_pred             ccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC----
Q psy2787           3 ANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ----   70 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~----   70 (251)
                      ||||+...+.....+..        .++++||+.||.|+|++|||||||||.|  |+++++..+||+|||+|....    
T Consensus       675 MEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~N--IFLd~~~~VKIGDFGLAt~~~~~~~  752 (1351)
T KOG1035|consen  675 MEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRN--IFLDSRNSVKIGDFGLATDLKENLE  752 (1351)
T ss_pred             HhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcce--eEEcCCCCeeecccccchhhhhhhh
Confidence            79999888888665443        3578999999999999999999999999  999999999999999998621    


Q ss_pred             -------------CCceeecCCCCcCcccCCCcccCCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCC-ChhHHHHHH
Q psy2787          71 -------------NDCYVMTERKPLPCPWCPMESLKHNQ---FSQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQKI  133 (251)
Q Consensus        71 -------------~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~S~G~il~el~~~g~~pf~~~-~~~~~~~~i  133 (251)
                                   .......+...||.-|+|||++.+..   |+.|+|+||+|+|++||+.    ||... ....++..+
T Consensus       753 ~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y----PF~TsMERa~iL~~L  828 (1351)
T KOG1035|consen  753 SIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY----PFGTSMERASILTNL  828 (1351)
T ss_pred             hHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc----cCCchHHHHHHHHhc
Confidence                         11112335578999999999998654   9999999999999999987    57542 223344444


Q ss_pred             HhcCCCCCCC----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         134 DREGERLPRP----EACPVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       134 ~~~~~~~~~~----~~~~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      . .+ ..|.+    ..--+.-..+|+.+++.||.+|||+.+++..
T Consensus       829 R-~g-~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s  871 (1351)
T KOG1035|consen  829 R-KG-SIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS  871 (1351)
T ss_pred             c-cC-CCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence            2 22 22222    1222345789999999999999999999863

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.96  E-value=1.4e-28  Score=202.42  Aligned_cols=170  Identities=18%  Similarity=0.207  Sum_probs=128.9

Q ss_pred             cccccchhHHHHHhcCCCC----------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-CCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTEPCR----------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-SSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~~----------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~~~~   70 (251)
                      .+||++.++|.+.......          ..+.|++.||+|||+++|+||||||+|  |+++. ++.+||+|||++....
T Consensus        83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~n--il~~~~~~~~~l~dfg~~~~~~  160 (268)
T cd06624          83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDN--VLVNTYSGVVKISDFGTSKRLA  160 (268)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHH--EEEcCCCCeEEEecchhheecc
Confidence            4688888888776543211          235688899999999999999999999  88876 6799999999987643


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCCChhH-HHHHHHhcCCCCCCCCCCc
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQ--FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ-ILQKIDREGERLPRPEACP  147 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~  147 (251)
                      ... .......++..|+|||++.+..  ++.++|+||+|+++|++++ |..||....... ...........+..+..++
T Consensus       161 ~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (268)
T cd06624         161 GIN-PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMAT-GKPPFIELGEPQAAMFKVGMFKIHPEIPESLS  238 (268)
T ss_pred             cCC-CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHh-CCCCCccccChhhhHhhhhhhccCCCCCcccC
Confidence            221 1122345678899999987643  7889999999999999999 999997643322 1112212233344566788


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      .++.+++.+||+.+|++|||+.+++.|.
T Consensus       239 ~~~~~li~~~l~~~p~~Rpt~~~ll~~~  266 (268)
T cd06624         239 AEAKNFILRCFEPDPDKRASAHDLLQDP  266 (268)
T ss_pred             HHHHHHHHHHcCCCchhCCCHHHHHhCC
Confidence            9999999999999999999999998874

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.96  E-value=7.2e-29  Score=204.40  Aligned_cols=172  Identities=17%  Similarity=0.284  Sum_probs=132.2

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+....       ..++.+++.||.|||+++++|+||+|+|  |+++.++.++++|||+++......
T Consensus        85 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~n--il~~~~~~~~l~d~~~~~~~~~~~  162 (272)
T cd06629          85 IFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADN--LLVDADGICKISDFGISKKSDDIY  162 (272)
T ss_pred             EEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhh--EEEcCCCeEEEeeccccccccccc
Confidence            3578998888887654421       2245678899999999999999999999  999999999999999998643221


Q ss_pred             e-eecCCCCcCcccCCCcccCCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC----CCC
Q psy2787          74 Y-VMTERKPLPCPWCPMESLKHNQ--FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP----EAC  146 (251)
Q Consensus        74 ~-~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~----~~~  146 (251)
                      . .......++..|+|||++....  ++.++|+||+|+++|++++ |..||......+....+.........+    ..+
T Consensus       163 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06629         163 DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFA-GRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL  241 (272)
T ss_pred             cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHh-CCCCCcCcchHHHHHHhhccccCCcCCccccccC
Confidence            1 1123345778899999987654  7889999999999999999 999997665544333332222222222    346


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +.++.+++.+||..+|++|||+.+++.|.
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~  270 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELLQHP  270 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHhhCC
Confidence            88999999999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.96  E-value=5.8e-29  Score=206.45  Aligned_cols=172  Identities=22%  Similarity=0.290  Sum_probs=133.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|...+...       +..++.+++.||.|||+ .+|+||||+|+|  |+++.++.++|+|||++......
T Consensus        80 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~n--il~~~~~~~~l~d~gl~~~~~~~  157 (284)
T cd06620          80 MCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSN--ILVNSRGQIKLCDFGVSGELINS  157 (284)
T ss_pred             EEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHH--EEECCCCcEEEccCCcccchhhh
Confidence            468999988887765431       23456677899999997 689999999999  99999999999999998754322


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh-----------HHHHHHHhcCCCCC
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM-----------QILQKIDREGERLP  141 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~-----------~~~~~i~~~~~~~~  141 (251)
                         ......++..|+|||++.+..++.++|+|||||++|++++ |..||......           +....+... ....
T Consensus       158 ---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  232 (284)
T cd06620         158 ---IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELAL-GKFPFAFSNIDDDGQDDPMGILDLLQQIVQE-PPPR  232 (284)
T ss_pred             ---ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHh-CCCCCcccchhhhhhhhhhHHHHHHHHHhhc-cCCC
Confidence               1234567888999999988888999999999999999999 99999764431           223333222 1222


Q ss_pred             CC-CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         142 RP-EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       142 ~~-~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      .+ ..++.++.+++.+||..||++|||+.+++++.+-+.
T Consensus       233 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~  271 (284)
T cd06620         233 LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQ  271 (284)
T ss_pred             CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            22 237889999999999999999999999999876554

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.95  E-value=5e-30  Score=209.52  Aligned_cols=171  Identities=18%  Similarity=0.244  Sum_probs=130.6

Q ss_pred             cccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+..++|.+...       ..+...+.|+++||++||+++|+|+||||+|  |+++.++.++|+|||.+..... ..
T Consensus        76 v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~N--Il~~~~~~~~l~Dfg~~~~~~~-~~  152 (260)
T PF00069_consen   76 VMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPEN--ILLDENGEVKLIDFGSSVKLSE-NN  152 (260)
T ss_dssp             EEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGG--EEESTTSEEEESSGTTTEESTS-TT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccccccccccccccc-cc
Confidence            567888877776554       1234567788899999999999999999999  9999999999999999976421 12


Q ss_pred             eecCCCCcCcccCCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh---hHHHHHHHhcCCCC--CCCCCCcH
Q psy2787          75 VMTERKPLPCPWCPMESLK-HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG---MQILQKIDREGERL--PRPEACPV  148 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~---~~~~~~i~~~~~~~--~~~~~~~~  148 (251)
                      .......++..|+|||++. +..++.++||||+|+++|+|++ |..||.....   ..............  ......+.
T Consensus       153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (260)
T PF00069_consen  153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLT-GKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSE  231 (260)
T ss_dssp             SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHH-SSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccc-cccccccccchhhhhhhhhcccccccccccccchhHH
Confidence            2445567788899999998 7788999999999999999999 9999988732   22222221111011  11122347


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+++.+||+.||++||++.+++++.+
T Consensus       232 ~l~~li~~~l~~~p~~R~~~~~l~~~~~  259 (260)
T PF00069_consen  232 ELRDLIKKMLSKDPEQRPSAEELLKHPW  259 (260)
T ss_dssp             HHHHHHHHHSSSSGGGSTTHHHHHTSGG
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCCC
Confidence            9999999999999999999999988643

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.95  E-value=7.5e-29  Score=202.12  Aligned_cols=166  Identities=19%  Similarity=0.309  Sum_probs=136.4

Q ss_pred             cccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .+||++.++|.+.+...           ....+.+++.||+|||+.|++|+||+|+|  |+++.++.+||+|||++....
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~n--i~~~~~~~~kl~d~g~~~~~~  154 (256)
T cd08530          77 VMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSAN--ILLVANDLVKIGDLGISKVLK  154 (256)
T ss_pred             EehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcce--EEEecCCcEEEeeccchhhhc
Confidence            56888888877655331           12345578899999999999999999999  999999999999999998755


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ..   ......++..|++||.+.+..++.++|+||+|+++|++++ |..||...+..++...+. .+...+.+...+.++
T Consensus       155 ~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  229 (256)
T cd08530         155 KN---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMAT-FAPPFEARSMQDLRYKVQ-RGKYPPIPPIYSQDL  229 (256)
T ss_pred             cC---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHh-cCCCCCCchhhCHHH
Confidence            43   2223456778999999998888999999999999999999 999999887766666653 344445556788999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      .+++.+||..+|++||++.+++++
T Consensus       230 ~~li~~~l~~~p~~Rp~~~~~l~~  253 (256)
T cd08530         230 QNFIRSMLQVKPKLRPNCDKILAS  253 (256)
T ss_pred             HHHHHHHcCCCcccCCCHHHHhcC
Confidence            999999999999999999999876

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=6.9e-29  Score=221.22  Aligned_cols=154  Identities=15%  Similarity=0.121  Sum_probs=117.1

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCch
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQA  100 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  100 (251)
                      .++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+++..............||..|+|||++.+..++.+
T Consensus       271 ~i~~ql~~aL~yLH~~gIiHrDLKP~N--ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  348 (501)
T PHA03210        271 AIMKQLLCAVEYIHDKKLIHRDIKLEN--IFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEI  348 (501)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHH--EEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcH
Confidence            366788999999999999999999999  999999999999999998765443333344578999999999999899999


Q ss_pred             hHHHHHHHHHHHHHhCCCC-CCCCCC--h-hHHHHHHHhcC---CCCC--------------------------CCCCCc
Q psy2787         101 SDAWMFGVTIWEMFTFGAE-PWVGLN--G-MQILQKIDREG---ERLP--------------------------RPEACP  147 (251)
Q Consensus       101 ~Di~S~G~il~el~~~g~~-pf~~~~--~-~~~~~~i~~~~---~~~~--------------------------~~~~~~  147 (251)
                      +|||||||++|||++ |.. ||.+..  . .++...+...+   ...+                          ....++
T Consensus       349 ~DiwSlGvil~ell~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  427 (501)
T PHA03210        349 TDIWSCGLILLDMLS-HDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLP  427 (501)
T ss_pred             HHHHHHHHHHHHHHH-CCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCC
Confidence            999999999999999 654 554321  1 22222111000   0000                          012355


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .++.+++.+||..||++|||+.+++.|.+.
T Consensus       428 ~~~~~li~kmL~~DP~~Rpsa~elL~hp~f  457 (501)
T PHA03210        428 ADFEYPLVKMLTFDWHLRPGAAELLALPLF  457 (501)
T ss_pred             hHHHHHHHHHhccCcccCcCHHHHhhChhh
Confidence            677888999999999999999999998664

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.95  E-value=7.5e-29  Score=205.55  Aligned_cols=169  Identities=14%  Similarity=0.140  Sum_probs=123.2

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++ +++.+.+...        ...++.|+++||.|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        77 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~n--il~~~~~~~~l~dfg~~~~~~~~~  153 (284)
T cd07839          77 VFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQN--LLINKNGELKLADFGLARAFGIPV  153 (284)
T ss_pred             EEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH--EEEcCCCcEEECccchhhccCCCC
Confidence            467876 4565544321        23456788899999999999999999999  999999999999999998643321


Q ss_pred             eeecCCCCcCcccCCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCC-CCCChhHHHHHHHhcC--------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAEPW-VGLNGMQILQKIDREG--------------  137 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~S~G~il~el~~~g~~pf-~~~~~~~~~~~i~~~~--------------  137 (251)
                      . ......++..|+|||++.+.. ++.++||||+||++|+|++ |..|+ .+.+..+....+...-              
T Consensus       154 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07839         154 R-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN-AGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKL  231 (284)
T ss_pred             C-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHh-cCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhc
Confidence            1 122345677899999987644 6899999999999999999 77775 4444333333221100              


Q ss_pred             -C---CC---------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         138 -E---RL---------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       138 -~---~~---------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                       .   ..         ...+.++.++.+++.+||+.||.+|||+.+++.|.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~  282 (284)
T cd07839         232 PDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP  282 (284)
T ss_pred             ccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCC
Confidence             0   00         01134678899999999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>KOG0577|consensus

Probab=99.95  E-value=4.1e-29  Score=214.62  Aligned_cols=167  Identities=17%  Similarity=0.251  Sum_probs=137.9

Q ss_pred             cccccc--hhHHHHHhcCCCCCC-----CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAE--LNAFQENYTEPCRKP-----LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~--l~~l~~~~~~~~~~~-----~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +||||-  ..|+++....++...     ..+.+.||+|||+.+.||||||..|  ||+++.|.|||+|||.|.....   
T Consensus       104 VMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGN--ILLse~g~VKLaDFGSAsi~~P---  178 (948)
T KOG0577|consen  104 VMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGN--ILLSEPGLVKLADFGSASIMAP---  178 (948)
T ss_pred             HHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccc--eEecCCCeeeeccccchhhcCc---
Confidence            567763  456777666554321     2233489999999999999999999  9999999999999999876443   


Q ss_pred             eecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                        .++..||+.|||||++.   .+.|+-++||||+|++..|+.- .++|+...+.+..+..|.+...+.-....++..+.
T Consensus       179 --AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAE-RkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~  255 (948)
T KOG0577|consen  179 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFR  255 (948)
T ss_pred             --hhcccCCccccchhHheeccccccCCccceeeccchhhhhhh-cCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHH
Confidence              46789999999999986   4679999999999999999999 99999999998888888655444334467899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +++..||.+-|.+|||..+++.|..
T Consensus       256 ~Fvd~CLqKipqeRptse~ll~H~f  280 (948)
T KOG0577|consen  256 NFVDSCLQKIPQERPTSEELLKHRF  280 (948)
T ss_pred             HHHHHHHhhCcccCCcHHHHhhcch
Confidence            9999999999999999999987754

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.3e-28  Score=203.40  Aligned_cols=172  Identities=15%  Similarity=0.235  Sum_probs=132.6

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||.+.++|.+.....      ....+.+++.||.|||+.+|+|+||+|+|  |+++.++.++|+|||++........
T Consensus        79 lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~n--i~i~~~~~~~l~dfg~~~~~~~~~~  156 (277)
T cd06917          79 IIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAAN--ILVTNTGNVKLCDFGVAALLNQNSS  156 (277)
T ss_pred             EEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHH--EEEcCCCCEEEccCCceeecCCCcc
Confidence            357888888888766432      12234567899999999999999999999  9999999999999999987544321


Q ss_pred             eecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCC-CCcHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE-ACPVEVYA  152 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~  152 (251)
                       ......++..|+|||.+.++ .++.++|+||||+++|+|++ |..||.+.........+. ....+..+. ..+.++.+
T Consensus       157 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  233 (277)
T cd06917         157 -KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMAT-GNPPYSDVDAFRAMMLIP-KSKPPRLEDNGYSKLLRE  233 (277)
T ss_pred             -ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHh-CCCCCCCCChhhhhhccc-cCCCCCCCcccCCHHHHH
Confidence             22334577889999988654 46889999999999999999 999998766544433332 222222222 37889999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+||..||++||++.+++.+-+.
T Consensus       234 ~i~~~l~~~p~~R~~~~~il~~~~~  258 (277)
T cd06917         234 FVAACLDEEPKERLSAEELLKSKWI  258 (277)
T ss_pred             HHHHHcCCCcccCcCHHHHhhChHh
Confidence            9999999999999999999987554

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.95  E-value=1.6e-28  Score=203.83  Aligned_cols=171  Identities=16%  Similarity=0.204  Sum_probs=128.5

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.+.+......       .....+.+++.||+|||+++|+||||+|+|  |+++.++.+||+|||++.......
T Consensus        77 iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~n--i~~~~~~~~kl~d~g~~~~~~~~~  154 (288)
T cd07833          77 LVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPEN--ILVSESGVLKLCDFGFARALRARP  154 (288)
T ss_pred             EEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--eEECCCCCEEEEeeecccccCCCc
Confidence            45788887665543322       123456678899999999999999999999  999999999999999998755433


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc----------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE----------------  136 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~----------------  136 (251)
                      ........++..|+|||++.+. .++.++|+||+|+++|+|++ |..||.+....+....+...                
T Consensus       155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (288)
T cd07833         155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLD-GEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP  233 (288)
T ss_pred             cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence            2122334567789999999887 78899999999999999999 99999876544332222110                


Q ss_pred             ---CCCC-----------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         137 ---GERL-----------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       137 ---~~~~-----------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                         +...           ..+..++.++.+++.+||..+|++||++++++.+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  285 (288)
T cd07833         234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH  285 (288)
T ss_pred             cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence               0000           0122357889999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0584|consensus

Probab=99.95  E-value=2.1e-29  Score=217.66  Aligned_cols=167  Identities=15%  Similarity=0.193  Sum_probs=137.7

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhC--CcccCCCCCCCceEEEccC-CceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVN--NICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~--~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~   70 (251)
                      +.+|+..-|.|..|.....       +.-.+||++||.|||++  .|||||||.+|  |+++.+ |.|||+|+|||....
T Consensus       120 ~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDN--IFinG~~G~VKIGDLGLAtl~r  197 (632)
T KOG0584|consen  120 FITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDN--IFVNGNLGEVKIGDLGLATLLR  197 (632)
T ss_pred             eeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccce--EEEcCCcCceeecchhHHHHhh
Confidence            4678889999998765432       23357889999999998  59999999999  888765 799999999998865


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-CChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVG-LNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      .+   ...+..||+.|||||++. ..|+..+||||||++++||+| +..||.. .+..+++.++..+..+-.....-.++
T Consensus       198 ~s---~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT-~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPe  272 (632)
T KOG0584|consen  198 KS---HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVT-SEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPE  272 (632)
T ss_pred             cc---ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHh-ccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHH
Confidence            55   234578999999999988 578999999999999999999 9999964 67789999986443333333445679


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++++|.+|+.. .+.|+|+.++|.+-
T Consensus       273 vr~fIekCl~~-~~~R~sa~eLL~d~  297 (632)
T KOG0584|consen  273 VREFIEKCLAT-KSERLSAKELLKDP  297 (632)
T ss_pred             HHHHHHHHhcC-chhccCHHHHhhCh
Confidence            99999999999 99999999999864

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.95  E-value=1.3e-28  Score=227.09  Aligned_cols=176  Identities=14%  Similarity=0.094  Sum_probs=131.3

Q ss_pred             CcccccchhHHHHHhcCC------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEcc
Q psy2787           1 MSANFAELNAFQENYTEP------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGD   62 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~D   62 (251)
                      |.+||++.++|.+.+...                  ...++.|+++||+|||++||+||||||+|  |+++.++.+||+|
T Consensus        79 LVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeN--ILLd~dg~vKLiD  156 (932)
T PRK13184         79 YTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDN--ILLGLFGEVVILD  156 (932)
T ss_pred             EEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchhe--EEEcCCCCEEEEe
Confidence            467899888887755321                  01234588899999999999999999999  9999999999999


Q ss_pred             CCCCcccCCCc-----------------eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC
Q psy2787          63 FGMMRYSQNDC-----------------YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN  125 (251)
Q Consensus        63 FGla~~~~~~~-----------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~  125 (251)
                      ||+++......                 ........||+.|+|||++.+..++.++||||+||++|||++ |..||.+..
T Consensus       157 FGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLT-G~~PF~~~~  235 (932)
T PRK13184        157 WGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT-LSFPYRRKK  235 (932)
T ss_pred             cCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHH-CCCCCCCcc
Confidence            99998652110                 011123468999999999999889999999999999999999 999998755


Q ss_pred             hhHHHHHH-HhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCC-CHHHHHHHHHhhc
Q psy2787         126 GMQILQKI-DREGERLPRPEACPVEVYALMRQCWSKNPAERP-KFSTLKDCLYRLT  179 (251)
Q Consensus       126 ~~~~~~~i-~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rp-s~~~il~~l~~~~  179 (251)
                      ........ ............+++.+.+++.+|++.||++|+ +++++++.|....
T Consensus       236 ~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l  291 (932)
T PRK13184        236 GRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL  291 (932)
T ss_pred             hhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence            44332221 111111111246788999999999999999996 5566666666553

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=7.3e-29  Score=229.82  Aligned_cols=169  Identities=17%  Similarity=0.244  Sum_probs=128.6

Q ss_pred             CcccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhhhC-------CcccCCCCCCCceEEEcc--------
Q psy2787           1 MSANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFSVN-------NICSCQFSSSSLLILFFS--------   54 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH~~-------~iiHrdlkp~ni~il~~~--------   54 (251)
                      |.+||++.++|...+...           +..++.|++.||+|||+.       +||||||||+|  ||++.        
T Consensus        91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeN--ILL~s~~~~lg~i  168 (1021)
T PTZ00266         91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQN--IFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHH--eEeecCccccccc
Confidence            468999988888765431           234567889999999984       49999999999  77643        


Q ss_pred             ---------CCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy2787          55 ---------SSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH--NQFSQASDAWMFGVTIWEMFTFGAEPWVG  123 (251)
Q Consensus        55 ---------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~S~G~il~el~~~g~~pf~~  123 (251)
                               .+.+||+|||++.......  ......+|+.|+|||++.+  ..++.++|||||||++|+|++ |..||..
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT-Gk~PF~~  245 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS-GKTPFHK  245 (1021)
T ss_pred             cccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH-CCCCCCc
Confidence                     3458999999998654332  2234578999999999864  457899999999999999999 9999987


Q ss_pred             CChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         124 LNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       124 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      .................+ ....+.++.+||..||..+|.+||++.+++.+.
T Consensus       246 ~~~~~qli~~lk~~p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~  296 (1021)
T PTZ00266        246 ANNFSQLISELKRGPDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLGYQ  296 (1021)
T ss_pred             CCcHHHHHHHHhcCCCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccH
Confidence            654433332223332222 245788999999999999999999999999754

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.95  E-value=1.1e-28  Score=201.85  Aligned_cols=171  Identities=16%  Similarity=0.191  Sum_probs=134.0

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+....       ...+.|++.||+|||+++|+|+||+|+|  |+++.++.+||+|||++.......
T Consensus        70 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~n--il~~~~~~~~l~dfg~~~~~~~~~  147 (265)
T cd05579          70 LVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDN--ILIDSNGHLKLTDFGLSKVGLVRR  147 (265)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHH--eEEcCCCCEEEEecccchhcccCc
Confidence            3578888778777654322       2357788899999999999999999999  999999999999999988633221


Q ss_pred             e-------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q psy2787          74 Y-------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEAC  146 (251)
Q Consensus        74 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  146 (251)
                      .       .......++..|++||.......+.++|+||||+++|++++ |..||......+....+.......+.....
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (265)
T cd05579         148 QINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLV-GIPPFHGETPEEIFQNILNGKIEWPEDVEV  226 (265)
T ss_pred             ccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCcCCCccccC
Confidence            1       12233456778999999988888999999999999999999 999998887777776665433333322234


Q ss_pred             cHHHHHHHHHHhccCCCCCCCH---HHHHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKF---STLKDC  174 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~---~~il~~  174 (251)
                      +..+.+++.+||+.+|++|||+   .+++++
T Consensus       227 ~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~  257 (265)
T cd05579         227 SDEAIDLISKLLVPDPEKRLGAKSIEEIKNH  257 (265)
T ss_pred             CHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence            8999999999999999999999   555543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.95  E-value=1.7e-28  Score=215.70  Aligned_cols=153  Identities=15%  Similarity=0.144  Sum_probs=115.3

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~   99 (251)
                      .++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+++....... .......||..|+|||++.+..++.
T Consensus       264 ~i~~qi~~aL~yLH~~gIvHrDLKP~N--ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~  341 (461)
T PHA03211        264 AVARQLLSAIDYIHGEGIIHRDIKTEN--VLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTP  341 (461)
T ss_pred             HHHHHHHHHHHHHHHCCEEECcCCHHH--EEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCc
Confidence            456788899999999999999999999  9999999999999999987543221 1223456899999999999988999


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCC--------ChhHHHHHHHhcCCC-------------------------CCCC---
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGL--------NGMQILQKIDREGER-------------------------LPRP---  143 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~--------~~~~~~~~i~~~~~~-------------------------~~~~---  143 (251)
                      ++|||||||++|||++ |..|+.+.        ...++...+...+..                         ....   
T Consensus       342 ~sDvwSlGviL~El~~-g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~  420 (461)
T PHA03211        342 SVDIWSAGLVIFEAAV-HTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPA  420 (461)
T ss_pred             hHHHHHHHHHHHHHHH-cCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcc
Confidence            9999999999999999 66554221        122233322211110                         0000   


Q ss_pred             ----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         144 ----EACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       144 ----~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                          ...+..+.+|+.+||+.||.+|||+.++++|-+
T Consensus       421 ~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~  457 (461)
T PHA03211        421 WTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL  457 (461)
T ss_pred             hhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence                124457899999999999999999999999854

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.95  E-value=2.7e-28  Score=201.83  Aligned_cols=168  Identities=14%  Similarity=0.115  Sum_probs=125.9

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||+. +++++.+...        +..++.|++.||+|||+++|+||||+|+|  |+++. +.+||+|||+++.....
T Consensus        77 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~n--i~l~~-~~~kl~dfg~~~~~~~~  152 (282)
T cd07831          77 LVFELMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPEN--ILIKD-DILKLADFGSCRGIYSK  152 (282)
T ss_pred             EEEecCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHH--EEEcC-CCeEEEecccccccccC
Confidence            3567776 4666554331        23456778899999999999999999999  99998 99999999999875433


Q ss_pred             ceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC--------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG--------------  137 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~--------------  137 (251)
                      ..  .....++..|+|||++.. ..++.++||||+||++|||++ |..||.+.+..+....+....              
T Consensus       153 ~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (282)
T cd07831         153 PP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILS-LFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKS  229 (282)
T ss_pred             CC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHc-CCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhccc
Confidence            21  122346778999997654 456889999999999999999 999998876554433332110              


Q ss_pred             --CCCCC-----------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         138 --ERLPR-----------PEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       138 --~~~~~-----------~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                        .....           ...++.++.+++.+||..+|++||++.+++++-
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~  280 (282)
T cd07831         230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHP  280 (282)
T ss_pred             ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCC
Confidence              00000           134678999999999999999999999999864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.95  E-value=1e-28  Score=202.51  Aligned_cols=169  Identities=21%  Similarity=0.290  Sum_probs=131.6

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |.+||++.++|.+.+....        ...+.+++.||+|||+ .+++|+||||+|  |+++.++.+||+|||.+.....
T Consensus        76 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~n--i~~~~~~~~~l~d~g~~~~~~~  153 (265)
T cd06605          76 ICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSN--ILVNSRGQIKLCDFGVSGQLVN  153 (265)
T ss_pred             EEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHH--EEECCCCCEEEeecccchhhHH
Confidence            3567888777777655321        2345677899999999 999999999999  9999999999999999876433


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----hhHHHHHHHhcCCCCCCCCC-
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN-----GMQILQKIDREGERLPRPEA-  145 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~-  145 (251)
                      ...   ....++..|+|||++.+..++.++||||+|+++|++++ |..||....     ..+....+. ....+..+.. 
T Consensus       154 ~~~---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  228 (265)
T cd06605         154 SLA---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELAT-GRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGK  228 (265)
T ss_pred             HHh---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHh-CCCCCCccccccccHHHHHHHHh-cCCCCCCChhh
Confidence            211   12567778999999998889999999999999999999 999997642     223333332 2233333333 


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.++.+++.+||..+|++|||+.+++.+-+
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~  259 (265)
T cd06605         229 FSPDFQDFVNLCLIKDPRERPSYKELLEHPF  259 (265)
T ss_pred             cCHHHHHHHHHHcCCCchhCcCHHHHhhCch
Confidence            7889999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.95  E-value=1.5e-28  Score=210.17  Aligned_cols=169  Identities=15%  Similarity=0.166  Sum_probs=127.2

Q ss_pred             cccccchhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           2 SANFAELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      .+||+.. ++.+.+...     ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......  .
T Consensus        99 v~e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~N--il~~~~~~~kL~Dfg~~~~~~~~~--~  173 (353)
T cd07850          99 VMELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN--IVVKSDCTLKILDFGLARTAGTSF--M  173 (353)
T ss_pred             EEeccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH--EEECCCCCEEEccCccceeCCCCC--C
Confidence            4666653 455543321     22356788999999999999999999999  999999999999999998754332  1


Q ss_pred             cCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-----------------
Q psy2787          77 TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-----------------  139 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-----------------  139 (251)
                      .....++..|+|||++.+..++.++||||+||++|+|++ |..||.+.+.......+...-..                 
T Consensus       174 ~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (353)
T cd07850         174 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIR-GTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYV  252 (353)
T ss_pred             CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHh
Confidence            233456778999999999889999999999999999999 99999876544333322110000                 


Q ss_pred             ---C----------------C-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 ---L----------------P-----RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 ---~----------------~-----~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                         .                +     .+...+..+.+++.+||..||++|||+.+++.+-+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~  313 (353)
T cd07850         253 ENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPY  313 (353)
T ss_pred             hcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChh
Confidence               0                0     01134567899999999999999999999999865

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.95  E-value=3e-28  Score=201.95  Aligned_cols=172  Identities=15%  Similarity=0.212  Sum_probs=130.6

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||+ .++|.+.+...        ...++.|++.||+|||+.+|+|+||||+|  |+++.++.++|+|||++......
T Consensus        76 ~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~n--i~~~~~~~~~l~dfg~~~~~~~~  152 (286)
T cd07832          76 LVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPAN--LLISADGVLKIADFGLARLFSEE  152 (286)
T ss_pred             EEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHH--EEEcCCCcEEEeeeeecccccCC
Confidence            357888 78887765432        22356688899999999999999999999  99999999999999999875443


Q ss_pred             ceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-----------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-----------  140 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-----------  140 (251)
                      .........++..|+|||++.+. .++.++||||+|+++|+|++ |..||.+.........+...-..+           
T Consensus       153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (286)
T cd07832         153 EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLN-GSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSL  231 (286)
T ss_pred             CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHc-CCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCc
Confidence            22223345678889999998654 46889999999999999999 988887766554444332210000           


Q ss_pred             --------C---------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         141 --------P---------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       141 --------~---------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                              +         ..+..+.++.+++.+||..+|++||++++++.|.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~  284 (286)
T cd07832         232 PDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPY  284 (286)
T ss_pred             chhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcC
Confidence                    0         01245688999999999999999999999998753

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.95  E-value=3.5e-28  Score=201.06  Aligned_cols=172  Identities=15%  Similarity=0.230  Sum_probs=138.3

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||++.+++.+.+...      ....+.+++.|+.|||+++|+|+||+|+|  |+++.++.++|+|||++....... .
T Consensus        80 v~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~N--i~i~~~~~~~l~dfg~~~~~~~~~-~  156 (277)
T cd06641          80 IMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAAN--VLLSEHGEVKLADFGVAGQLTDTQ-I  156 (277)
T ss_pred             EEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHh--EEECCCCCEEEeecccceecccch-h
Confidence            57899888888776532      12345677799999999999999999999  999999999999999987654321 1


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMR  155 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~  155 (251)
                      ......++..|+|||.+.+..++.++|+||+||++|++++ |..||...........+. .+.....+..++.++.+++.
T Consensus       157 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~  234 (277)
T cd06641         157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAK-GEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFVE  234 (277)
T ss_pred             hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHc-CCCCCCccchHHHHHHHh-cCCCCCCCcccCHHHHHHHH
Confidence            2233456778999999988888999999999999999999 999998776655555542 33344455678899999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHhh
Q psy2787         156 QCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       156 ~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +||..+|++||++.+++.|..-.
T Consensus       235 ~~l~~~p~~Rp~~~~~l~~~~~~  257 (277)
T cd06641         235 ACLNKEPSFRPTAKELLKHKFIV  257 (277)
T ss_pred             HHccCChhhCcCHHHHHhCHHHh
Confidence            99999999999999999985443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.95  E-value=1.4e-28  Score=205.19  Aligned_cols=173  Identities=17%  Similarity=0.241  Sum_probs=134.8

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.+...      ....+.+++.||+|||+++++|+||+|+|  |+++.++.+||+|||++........
T Consensus        93 lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~N--ili~~~~~~kL~dfg~~~~~~~~~~  170 (293)
T cd06647          93 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN--ILLGMDGSVKLTDFGFCAQITPEQS  170 (293)
T ss_pred             EEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHH--EEEcCCCCEEEccCcceeccccccc
Confidence            357889888888866532      13356678899999999999999999999  9999999999999999876443321


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~l  153 (251)
                       ......++..|++||.+.+..++.++|+||||+++|++++ |..||...+.......+...+ .....+..++..+.++
T Consensus       171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  248 (293)
T cd06647         171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF  248 (293)
T ss_pred             -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHH
Confidence             2233457788999999988888999999999999999999 999998765543332222111 1222334577889999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+||+.+|++||++.+++.|-+.
T Consensus       249 i~~~l~~~p~~Rp~~~~il~h~~~  272 (293)
T cd06647         249 LNRCLEMDVEKRGSAKELLQHPFL  272 (293)
T ss_pred             HHHHccCChhhCcCHHHHhcCHHH
Confidence            999999999999999999988543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.95  E-value=2.3e-28  Score=202.95  Aligned_cols=174  Identities=18%  Similarity=0.282  Sum_probs=135.5

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+......        ..++.+++.||+|||+.||+|+||+|+|  |+++.++.++|+|||++.......
T Consensus        93 v~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~n--i~i~~~~~~~l~d~~~~~~~~~~~  170 (286)
T cd06614          93 VMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDN--ILLSKDGSVKLADFGFAAQLTKEK  170 (286)
T ss_pred             EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhh--EEEcCCCCEEECccchhhhhccch
Confidence            568888778877655432        2246677899999999999999999999  999999999999999987643321


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-CCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-PRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~  152 (251)
                      . ......++..|++||++.+..++.++|+||||+++|+|++ |..||...........+....... ..+..++..+.+
T Consensus       171 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  248 (286)
T cd06614         171 S-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAE-GEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKD  248 (286)
T ss_pred             h-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHH
Confidence            1 1223456778999999988888999999999999999999 999998776655444443322221 222348899999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ++.+||+.+|.+||++.+++++.+-..
T Consensus       249 li~~~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         249 FLNKCLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             HHHHHhccChhhCcCHHHHhhChHhhc
Confidence            999999999999999999998765443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.95  E-value=2.9e-28  Score=205.19  Aligned_cols=152  Identities=15%  Similarity=0.138  Sum_probs=111.4

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEE----ccCCceEEccCCCCcccCCCce--eecCCCCcCcccCCCcccCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILF----FSSSSSSSGDFGMMRYSQNDCY--VMTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~----~~~~~~kl~DFGla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~   94 (251)
                      .++.|++.||+|||+++|+||||||+|  |++    +.++.+||+|||+++.......  .......+|..|+|||++.+
T Consensus       112 ~i~~qi~~aL~~lH~~~ivH~Dlkp~N--il~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07867         112 SLLYQILDGIHYLHANWVLHRDLKPAN--ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             HHHHHHHHHHHHHHhCCEEcCCCCHHH--EEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcC
Confidence            346688899999999999999999999  887    4567899999999987543321  12234567889999999876


Q ss_pred             C-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChh---------HHHHHHHh-cCC-------------------------
Q psy2787          95 N-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM---------QILQKIDR-EGE-------------------------  138 (251)
Q Consensus        95 ~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~---------~~~~~i~~-~~~-------------------------  138 (251)
                      . .++.++||||+||++|||++ |..||......         .....+.. -+.                         
T Consensus       190 ~~~~~~~~DiwSlG~il~el~t-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (317)
T cd07867         190 ARHYTKAIDIWAIGCIFAELLT-SEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRT  268 (317)
T ss_pred             CCccCcHHHHHhHHHHHHHHHh-CCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhccc
Confidence            4 57899999999999999999 99999643211         00000000 000                         


Q ss_pred             CC----------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         139 RL----------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       139 ~~----------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ..          ......+..+.+++.+|+..||.+|||+.++++|.
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp  315 (317)
T cd07867         269 TYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDP  315 (317)
T ss_pred             ccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCC
Confidence            00          00112345688999999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.95  E-value=1.5e-28  Score=203.27  Aligned_cols=170  Identities=12%  Similarity=0.139  Sum_probs=131.8

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ..++.|++.||.|||+.+|+|+||+|+|  |+++.++.+||+|||++.....
T Consensus        70 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~N--il~~~~~~~~l~dfg~~~~~~~  147 (277)
T cd05577          70 LVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPEN--VLLDDHGNVRISDLGLAVELKG  147 (277)
T ss_pred             EEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH--EEECCCCCEEEccCcchhhhcc
Confidence            4678998888887654322         2235577899999999999999999999  9999999999999999876443


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh----hHHHHHHHhcCCCCCCCCCCc
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG----MQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ..  ......++..|+|||++.+..++.++||||+|+++|+|++ |..||.....    ..+...+  .......+..++
T Consensus       148 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  222 (277)
T cd05577         148 GK--KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIA-GRSPFRQRKEKVEKEELKRRT--LEMAVEYPDKFS  222 (277)
T ss_pred             CC--ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhh-CCCCCCCCcccccHHHHHhcc--ccccccCCccCC
Confidence            21  2233456778999999988888999999999999999999 9999976543    2222222  122334456688


Q ss_pred             HHHHHHHHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         148 VEVYALMRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      +.+.+++.+||+.+|++||     ++.+++.|.+-
T Consensus       223 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~  257 (277)
T cd05577         223 PEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLF  257 (277)
T ss_pred             HHHHHHHHHHccCChhHccCCCcccHHHHHhChhh
Confidence            9999999999999999999     77778776544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.9e-28  Score=201.17  Aligned_cols=170  Identities=18%  Similarity=0.275  Sum_probs=134.9

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||.+.++|.+.+...       ...++.+++.||.|||+++|+|+||||+|  |+++.++.++|+|||+++.......
T Consensus        84 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~n--i~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          84 FVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGAN--ILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH--EEEcCCCCEEECccccccccccccc
Confidence            46888888877765421       12345688899999999999999999999  9999999999999999986432110


Q ss_pred             --eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          75 --VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        75 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        .......++..|+|||++.+..++.++|+||||+++|++++ |..||.+.........+.........+...+.++.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  240 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT-EKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRD  240 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHh-CCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHH
Confidence              11123457788999999998888999999999999999999 999998776655555554444455567788999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.+||. +|..||++.+++.|.
T Consensus       241 ~i~~~l~-~~~~r~~~~~~~~~~  262 (264)
T cd06653         241 FLKQIFV-EEKRRPTAEFLLRHP  262 (264)
T ss_pred             HHHHHhc-CcccCccHHHHhcCC
Confidence            9999999 579999999988764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.95  E-value=2.3e-28  Score=199.03  Aligned_cols=168  Identities=18%  Similarity=0.275  Sum_probs=137.4

Q ss_pred             cccccchhHHHHHhcCCC-----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTEPC-----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~-----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .+||++.++|.+.+....           ...+.+++.||+|||++|++|+||+|+|  |+++.++.++|+|||++....
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~n--il~~~~~~~~l~d~~~~~~~~  154 (258)
T cd08215          77 VMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQN--IFLTSNGLVKLGDFGISKVLS  154 (258)
T ss_pred             EEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHH--eEEcCCCcEEECCccceeecc
Confidence            567888777777655432           2345677899999999999999999999  999999999999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ... .......++..|+|||.+.+..++.++|+||+|+++|+|++ |..||......++..... .....+.+..++.++
T Consensus       155 ~~~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  231 (258)
T cd08215         155 STV-DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCT-LKHPFEGENLLELALKIL-KGQYPPIPSQYSSEL  231 (258)
T ss_pred             cCc-ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHc-CCCCCCCCcHHHHHHHHh-cCCCCCCCCCCCHHH
Confidence            432 12233467778999999988888999999999999999999 999998877666666654 333445566788999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      .+++.+||..+|++|||+.+++++
T Consensus       232 ~~~i~~~l~~~p~~Rp~~~~ll~~  255 (258)
T cd08215         232 RNLVSSLLQKDPEERPSIAQILQS  255 (258)
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcC
Confidence            999999999999999999999876

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.95  E-value=7.6e-28  Score=196.42  Aligned_cols=169  Identities=17%  Similarity=0.252  Sum_probs=134.5

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCcccCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYSQN   71 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~~~   71 (251)
                      .+||++.++|.+.+....         ...+.+++.||+|||+++|+|+||||+|  |++++++ .+||+|||.+.....
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~n--il~~~~~~~~~l~d~~~~~~~~~  154 (257)
T cd08225          77 VMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQN--IFLSKNGMVAKLGDFGIARQLND  154 (257)
T ss_pred             EEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHH--EEEcCCCCeEEecccccchhccC
Confidence            578888888887664322         2235577899999999999999999999  9998886 569999999887543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ... ......++..|+|||++.+..++.++|+||||+++|++++ |..||...+..+....+. .....+.....+.++.
T Consensus       155 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  231 (257)
T cd08225         155 SME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCT-LKHPFEGNNLHQLVLKIC-QGYFAPISPNFSRDLR  231 (257)
T ss_pred             Ccc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCccHHHHHHHHh-cccCCCCCCCCCHHHH
Confidence            321 2223457888999999988888999999999999999999 999998776655555443 3333344566788999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +++.+||..+|++|||+.+++.+.
T Consensus       232 ~~i~~~l~~~p~~Rpt~~~ll~~~  255 (257)
T cd08225         232 SLISQLFKVSPRDRPSITSILKRP  255 (257)
T ss_pred             HHHHHHhccChhhCcCHHHHhhCC
Confidence            999999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.95  E-value=4.2e-28  Score=203.68  Aligned_cols=155  Identities=16%  Similarity=0.113  Sum_probs=121.7

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC-CCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~   99 (251)
                      .++.|++.||+|||+.||+||||||+|  |+++.++.+||+|||++........ ......++..|+|||++.+ ..++.
T Consensus       112 ~~~~qi~~~l~~lH~~~i~H~dl~p~n--il~~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~  188 (309)
T cd07845         112 CLMLQLLRGLQYLHENFIIHRDLKVSN--LLLTDKGCLKIADFGLARTYGLPAK-PMTPKVVTLWYRAPELLLGCTTYTT  188 (309)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHH--EEECCCCCEEECccceeeecCCccC-CCCcccccccccChhhhcCCCCcCc
Confidence            467788899999999999999999999  9999999999999999987543321 1222344677999999865 45789


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-----------------CCC-----------CCCCcHHHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-----------------LPR-----------PEACPVEVY  151 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-----------------~~~-----------~~~~~~~~~  151 (251)
                      ++||||+|+++|+|++ |..||.+.+..+....+......                 ...           ....++++.
T Consensus       189 ~~DvwslG~il~el~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (309)
T cd07845         189 AIDMWAVGCILAELLA-HKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGL  267 (309)
T ss_pred             hHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHH
Confidence            9999999999999999 99999887776665554331100                 000           012477889


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +++.+||..||++|||+.+++.|.+-..
T Consensus       268 ~li~~ml~~dp~~R~t~~~il~h~~f~~  295 (309)
T cd07845         268 RLLNFLLMYDPKKRATAEEALESSYFKE  295 (309)
T ss_pred             HHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence            9999999999999999999999876543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.95  E-value=4e-28  Score=202.42  Aligned_cols=172  Identities=15%  Similarity=0.245  Sum_probs=135.1

Q ss_pred             CcccccchhHHHHHhcCCC------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEPC------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+......      ..++.|++.||+|||++||+|+||+|+|  |+++.++.++|+|||++........
T Consensus        94 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~N--ilv~~~~~~~l~dfg~~~~~~~~~~  171 (292)
T cd06657          94 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDS--ILLTHDGRVKLSDFGFCAQVSKEVP  171 (292)
T ss_pred             EEEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEECCCCCEEEcccccceecccccc
Confidence            3578888888877654321      2356778899999999999999999999  9999999999999999876433211


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-CCCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~l  153 (251)
                       ......++..|++||++.+..++.++|+||+|+++|++++ |..||.+....+....+... .........++..+.++
T Consensus       172 -~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  249 (292)
T cd06657         172 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGF  249 (292)
T ss_pred             -cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHH
Confidence             1233457788999999988888999999999999999999 99999887665554444222 11222334578899999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+||..+|.+||++.+++.+-+
T Consensus       250 i~~~l~~~P~~R~~~~~ll~~~~  272 (292)
T cd06657         250 LDRLLVRDPAQRATAAELLKHPF  272 (292)
T ss_pred             HHHHHhCCcccCcCHHHHhcChH
Confidence            99999999999999999998744

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.95  E-value=5.9e-28  Score=202.83  Aligned_cols=170  Identities=16%  Similarity=0.239  Sum_probs=130.5

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||+. +++.+.....        ....+.+++.||.|||+++++||||+|+|  |+++.++.+||+|||++......
T Consensus        92 lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~n--il~~~~~~~kl~dfg~~~~~~~~  168 (308)
T cd06634          92 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN--ILLSEPGLVKLGDFGSASIMAPA  168 (308)
T ss_pred             EEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHh--EEECCCCcEEECCcccceeecCc
Confidence            3567775 5555533211        12335677899999999999999999999  99999999999999998764332


Q ss_pred             ceeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                           ....++..|+|||++.   ...++.++|||||||++|+|++ |..||......+....+............++..
T Consensus       169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (308)
T cd06634         169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNESPALQSGHWSEY  242 (308)
T ss_pred             -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHc-CCCCCccccHHHHHHHHhhcCCCCcCcccccHH
Confidence                 2345677899999874   3457889999999999999999 999998766555555443333322234568889


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +.+++.+||..+|++||++.+++.+.+...
T Consensus       243 ~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         243 FRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             HHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence            999999999999999999999999877544

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.95  E-value=5.5e-28  Score=197.89  Aligned_cols=170  Identities=18%  Similarity=0.285  Sum_probs=136.5

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.....       ...++.++++|++|||+ .+++|+||+|+|  |+++.++.++|+|||++.......
T Consensus        77 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~n--i~~~~~~~~~l~df~~~~~~~~~~  154 (264)
T cd06623          77 VLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSN--LLINSKGEVKIADFGISKVLENTL  154 (264)
T ss_pred             EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHH--EEECCCCCEEEccCccceecccCC
Confidence            57888888888776532       23466778899999999 999999999999  999999999999999988754332


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---ChhHHHHHHHhcCCCCCCCCC-CcHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL---NGMQILQKIDREGERLPRPEA-CPVE  149 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~---~~~~~~~~i~~~~~~~~~~~~-~~~~  149 (251)
                      . ......++..|+|||.+.+..++.++|+||||+++|++++ |..||...   ...+....+. .......+.. ++..
T Consensus       155 ~-~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  231 (264)
T cd06623         155 D-QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECAL-GKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPE  231 (264)
T ss_pred             C-cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHh-CCCCCccccccCHHHHHHHHh-cCCCCCCCcccCCHH
Confidence            1 1123456778999999998888999999999999999999 99999776   3344444443 3333444555 8899


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+++.+||..+|++||++.+++++-+
T Consensus       232 l~~li~~~l~~~p~~R~~~~~ll~~~~  258 (264)
T cd06623         232 FRDFISACLQKDPKKRPSAAELLQHPF  258 (264)
T ss_pred             HHHHHHHHccCChhhCCCHHHHHhCHH
Confidence            999999999999999999999998743

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.95  E-value=3.9e-28  Score=205.62  Aligned_cols=171  Identities=18%  Similarity=0.169  Sum_probs=131.4

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+. +++.+.+...       ....+.+++.||+|||++||+||||||+|  |+++.++.++|+|||++........
T Consensus        82 v~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~n--ili~~~~~~~L~dfg~~~~~~~~~~  158 (330)
T cd07834          82 VTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSN--ILVNSNCDLKICDFGLARGVDPDED  158 (330)
T ss_pred             Eecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCCEEEcccCceEeeccccc
Confidence            456776 4566554332       12356778899999999999999999999  9999999999999999987544321


Q ss_pred             --eecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC----------
Q psy2787          75 --VMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP----------  141 (251)
Q Consensus        75 --~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~----------  141 (251)
                        .......++..|+|||++.+. .++.++|+||+|+++|+|++ |..||.+.+..+....+......+.          
T Consensus       159 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  237 (330)
T cd07834         159 EKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLT-RKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSE  237 (330)
T ss_pred             ccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHc-CCCCcCCCCHHHHHHHHHHhcCCCChhHhhhcccc
Confidence              122334567789999999887 78899999999999999999 9999988776655554433211110          


Q ss_pred             -------------------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         142 -------------------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       142 -------------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                         ..+..+.++.+++.+||+.+|++||++.+++.+.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~  291 (330)
T cd07834         238 KARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPY  291 (330)
T ss_pred             chhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCcc
Confidence                               01336788999999999999999999999998754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.95  E-value=4.6e-28  Score=201.85  Aligned_cols=169  Identities=13%  Similarity=0.087  Sum_probs=125.4

Q ss_pred             cccccchhHHHHHhcCC------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-CCceEEccCCCCcc
Q psy2787           2 SANFAELNAFQENYTEP------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-SSSSSSGDFGMMRY   68 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~~   68 (251)
                      .+||++. ++.+.+...            ....+.|++.||+|||+++|+||||+|+|  |+++. ++.+||+|||+++.
T Consensus        84 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~n--il~~~~~~~~kl~dfg~~~~  160 (295)
T cd07837          84 VFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQN--LLVDKQKGLLKIADLGLGRA  160 (295)
T ss_pred             EeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHH--EEEecCCCeEEEeeccccee
Confidence            5678774 566544321            12346777899999999999999999999  99998 88999999999886


Q ss_pred             cCCCceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-------
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-------  140 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-------  140 (251)
                      ...... ......+++.|+|||++.+ ..++.++|+||||+++|+|++ |..||.+.+..+....+...-..+       
T Consensus       161 ~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (295)
T cd07837         161 FSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSR-KQPLFPGDSELQQLLHIFKLLGTPTEQVWPG  238 (295)
T ss_pred             cCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence            433211 1223345778999998865 457899999999999999999 999998776554433332210000       


Q ss_pred             -------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         141 -------------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       141 -------------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                                         ...+.++.++.+++.+||..+|++||++.+++.|-
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~  292 (295)
T cd07837         239 VSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHP  292 (295)
T ss_pred             hhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCC
Confidence                               00134778899999999999999999999998763

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.95  E-value=3.5e-28  Score=201.63  Aligned_cols=171  Identities=25%  Similarity=0.277  Sum_probs=128.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.+.+.+.....       ....+.+++.||+|||+.+|+|+||+|+|  |++++++.++|+|||++.......
T Consensus        77 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~n--i~~~~~~~~~l~dfg~~~~~~~~~  154 (286)
T cd07846          77 LVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPEN--ILVSQSGVVKLCDFGFARTLAAPG  154 (286)
T ss_pred             EEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH--EEECCCCcEEEEeeeeeeeccCCc
Confidence            357888877776544321       23456678899999999999999999999  999999999999999988754332


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC--------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE--------------  138 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~--------------  138 (251)
                       .......++..|+|||++.+. .++.++||||||+++|||++ |..||.+....+....+.....              
T Consensus       155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T cd07846         155 -EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLT-GEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP  232 (286)
T ss_pred             -cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHc-CCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccch
Confidence             122234567789999998753 46789999999999999999 9999976654433332221000              


Q ss_pred             -----CCC----------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         139 -----RLP----------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       139 -----~~~----------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                           ..+          ..+.++..+.+++.+||..+|++||++.+++++-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~  284 (286)
T cd07846         233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHE  284 (286)
T ss_pred             HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCC
Confidence                 000          1235678899999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0667|consensus

Probab=99.95  E-value=1.4e-28  Score=213.76  Aligned_cols=153  Identities=20%  Similarity=0.221  Sum_probs=121.2

Q ss_pred             CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC--ceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCC
Q psy2787          20 RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS--SSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQF   97 (251)
Q Consensus        20 ~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~--~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~   97 (251)
                      +.++.|++.||.+||+.+|||+||||+|  ||+...+  .+||+|||.|.+.....+.-    .-+..|.|||++.+.+|
T Consensus       292 r~~~~Qil~~L~~L~~l~IIHcDLKPEN--ILL~~~~r~~vKVIDFGSSc~~~q~vytY----iQSRfYRAPEVILGlpY  365 (586)
T KOG0667|consen  292 RKFAQQILTALLFLHELGIIHCDLKPEN--ILLKDPKRSRIKVIDFGSSCFESQRVYTY----IQSRFYRAPEVILGLPY  365 (586)
T ss_pred             HHHHHHHHHHHHHHHhCCeeeccCChhh--eeeccCCcCceeEEecccccccCCcceee----eeccccccchhhccCCC
Confidence            4578899999999999999999999999  7775543  79999999999866554322    22334999999999999


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC----------------------C---------------
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER----------------------L---------------  140 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~----------------------~---------------  140 (251)
                      +.+.||||||||+.||++ |.+-|+|.+..+.+..|..--..                      +               
T Consensus       366 ~~~IDmWSLGCIlAEL~t-G~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~  444 (586)
T KOG0667|consen  366 DTAIDMWSLGCILAELFT-GEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSP  444 (586)
T ss_pred             CCccceeehhhhHHhHhc-CccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccch
Confidence            999999999999999999 99999998887777766440000                      0               


Q ss_pred             -------------CCC----------C-CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         141 -------------PRP----------E-ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       141 -------------~~~----------~-~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                                   ..|          . .-...+.+++.+|+.+||.+|+|..++++|.+--.
T Consensus       445 ~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  445 EVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG  507 (586)
T ss_pred             hhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence                         001          0 11135789999999999999999999999977553

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.95  E-value=3.5e-28  Score=202.10  Aligned_cols=170  Identities=18%  Similarity=0.245  Sum_probs=130.0

Q ss_pred             CcccccchhHHHHHhcC---C--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTE---P--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~---~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      |.+||++.++|.+....   .        ....+.+++.||.|||+.+++|+||+|+|  |+++.++.++|+|||++...
T Consensus        78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~n--il~~~~~~~~l~dfg~~~~~  155 (287)
T cd06621          78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSN--ILLTRKGQVKLCDFGVSGEL  155 (287)
T ss_pred             EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEEecCCeEEEeeccccccc
Confidence            35788888877664321   1        12356678899999999999999999999  99999999999999998764


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----ChhHHHHHHHhcCCCCCCC-
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL-----NGMQILQKIDREGERLPRP-  143 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~-----~~~~~~~~i~~~~~~~~~~-  143 (251)
                      ....   .....++..|+|||.+.+..++.++||||+|+++|+|++ |..||...     ...+....+... ..+..+ 
T Consensus       156 ~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  230 (287)
T cd06621         156 VNSL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQ-NRFPFPPEGEPPLGPIELLSYIVNM-PNPELKD  230 (287)
T ss_pred             cccc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCcccCCCCChHHHHHHHhcC-Cchhhcc
Confidence            3321   123456778999999998889999999999999999999 99999765     223333433221 111111 


Q ss_pred             -----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         144 -----EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       144 -----~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                           ...+..+.+++.+||..+|++|||+.+++++-+-
T Consensus       231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~  269 (287)
T cd06621         231 EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI  269 (287)
T ss_pred             CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence                 2356789999999999999999999999998764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.95  E-value=2.1e-28  Score=202.67  Aligned_cols=152  Identities=20%  Similarity=0.304  Sum_probs=118.0

Q ss_pred             CCCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC----C
Q psy2787          21 KPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH----N   95 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~   95 (251)
                      .++.|++.||+|||++ +|+||||||+|  |+++.++.+||+|||++.......  ......++..|+|||++.+    .
T Consensus       107 ~~~~qi~~~l~~lH~~~~i~h~dlkp~n--il~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~  182 (283)
T cd06617         107 KIAVSIVKALEYLHSKLSVIHRDVKPSN--VLINRNGQVKLCDFGISGYLVDSV--AKTIDAGCKPYMAPERINPELNQK  182 (283)
T ss_pred             HHHHHHHHHHHHHhhcCCeecCCCCHHH--EEECCCCCEEEeeccccccccccc--ccccccCCccccChhhcCCccccc
Confidence            4566788999999997 99999999999  999999999999999998654321  1223456778999998865    3


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCC-hhHHHHHHHhcCCCCCCC-CCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy2787          96 QFSQASDAWMFGVTIWEMFTFGAEPWVGLN-GMQILQKIDREGERLPRP-EACPVEVYALMRQCWSKNPAERPKFSTLKD  173 (251)
Q Consensus        96 ~~~~~~Di~S~G~il~el~~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~-~~~~~~~~~li~~cl~~dP~~Rps~~~il~  173 (251)
                      .++.++|+||+||++|+|++ |..||.... ..+....+.. +.....+ ..++.++.+++.+||..+|++||++.++++
T Consensus       183 ~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         183 GYDVKSDVWSLGITMIELAT-GRFPYDSWKTPFQQLKQVVE-EPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             ccCccccchhhHHHHHHHHh-CCCCCCccccCHHHHHHHHh-cCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            46789999999999999999 999997532 2222333322 2222222 457899999999999999999999999998


Q ss_pred             HHHhh
Q psy2787         174 CLYRL  178 (251)
Q Consensus       174 ~l~~~  178 (251)
                      +-+-.
T Consensus       261 ~~~~~  265 (283)
T cd06617         261 HPFFE  265 (283)
T ss_pred             Cchhh
Confidence            75543

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.95  E-value=5.9e-28  Score=195.81  Aligned_cols=167  Identities=20%  Similarity=0.293  Sum_probs=131.9

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||.+.++|.+.+....        ...+.+++.||++||+++++|+||+|+|  |+++.++.++|+|||.+.......
T Consensus        75 ~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~n--i~i~~~~~~~l~d~~~~~~~~~~~  152 (253)
T cd05122          75 VMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAAN--ILLTSDGEVKLIDFGLSAQLSDTK  152 (253)
T ss_pred             EEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHH--EEEccCCeEEEeeccccccccccc
Confidence            467888788877655431        2245677899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCcHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACPVEVY  151 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~  151 (251)
                      .  .....++..|++||++.+...+.++|+||||+++|++++ |..||...+.......... ......  +..++..+.
T Consensus       153 ~--~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  228 (253)
T cd05122         153 A--RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAE-GKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFK  228 (253)
T ss_pred             c--ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHh-CCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHH
Confidence            1  334567778999999988888999999999999999999 9999987755444443322 222222  233488999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      +++.+||..||++|||+.++++|
T Consensus       229 ~~i~~~l~~~p~~R~t~~~~l~~  251 (253)
T cd05122         229 DFLKKCLQKNPEKRPTAEQLLKH  251 (253)
T ss_pred             HHHHHHccCChhhCCCHHHHhcC
Confidence            99999999999999999999876

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>KOG0586|consensus

Probab=99.95  E-value=5.3e-29  Score=214.80  Aligned_cols=171  Identities=17%  Similarity=0.269  Sum_probs=149.6

Q ss_pred             cccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+..|++.+++..       .....+.|+.+|++|||+++|+|||||.+|  ++++.+..+||+|||++.++.... 
T Consensus       133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eN--ilL~~~mnikIaDfgfS~~~~~~~-  209 (596)
T KOG0586|consen  133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAEN--ILLDENMNIKIADFGFSTFFDYGL-  209 (596)
T ss_pred             EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhh--cccccccceeeeccccceeecccc-
Confidence            5899999999997543       345678899999999999999999999999  999999999999999999876432 


Q ss_pred             eecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       ...+.+|++.|+|||++.+..+ +.++|+||+|+++|.++. |.+||+|.+..++...+.....+.+.  .++.++.++
T Consensus       210 -~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~-GsLPFDG~~lk~Lr~rvl~gk~rIp~--~ms~dce~l  285 (596)
T KOG0586|consen  210 -MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVE-GSLPFDGQNLKELRPRVLRGKYRIPF--YMSCDCEDL  285 (596)
T ss_pred             -cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeee-cccccCCcccccccchheeeeecccc--eeechhHHH
Confidence             4556788999999999998876 479999999999999999 99999999988888888777666654  577789999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      |.+++..+|.+|++++++.++-|...
T Consensus       286 Lrk~lvl~Pskr~~~dqim~~~W~n~  311 (596)
T KOG0586|consen  286 LRKFLVLNPSKRGPCDQIMKDRWRND  311 (596)
T ss_pred             HHHhhccCccccCCHHHhhhhcccch
Confidence            99999999999999999999877544

>KOG2345|consensus

Probab=99.95  E-value=1.6e-28  Score=191.03  Aligned_cols=173  Identities=14%  Similarity=0.214  Sum_probs=128.6

Q ss_pred             cccchhHHHHHhcC-----------CCCCCCchhhHHhhhhhhCC--cccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           4 NFAELNAFQENYTE-----------PCRKPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         4 e~~~l~~l~~~~~~-----------~~~~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .|...|+|++..+.           .+...+..+++||++||+..  ++||||||.|  ||+.+++.+++.|||.+....
T Consensus       103 Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~N--ILls~~~~~vl~D~GS~~~a~  180 (302)
T KOG2345|consen  103 PYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPAN--ILLSDSGLPVLMDLGSATQAP  180 (302)
T ss_pred             ehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcce--eEecCCCceEEEeccCccccc
Confidence            45666777775442           23345667789999999998  9999999999  999999999999999987632


Q ss_pred             C----Cc----eeecCCCCcCcccCCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh--hHHHHHHHhcC
Q psy2787          71 N----DC----YVMTERKPLPCPWCPMESLKH---NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG--MQILQKIDREG  137 (251)
Q Consensus        71 ~----~~----~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~--~~~~~~i~~~~  137 (251)
                      -    ..    .........|..|.|||.+.-   ...+.++|||||||++|+|+. |..||...-.  ..+.-.+...+
T Consensus       181 i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf-~~sPfe~~~~~GgSlaLAv~n~q  259 (302)
T KOG2345|consen  181 IQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMF-GESPFERIYQQGGSLALAVQNAQ  259 (302)
T ss_pred             eEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHH-cCCcchHHhhcCCeEEEeeeccc
Confidence            1    11    001122455777999999873   346789999999999999999 9999953211  01111222334


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ...|.....++.+.+++..|++.||.+||++.+++.++..+.
T Consensus       260 ~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li  301 (302)
T KOG2345|consen  260 ISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI  301 (302)
T ss_pred             cccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence            445555568999999999999999999999999999987653

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.95  E-value=1.2e-27  Score=201.46  Aligned_cols=147  Identities=19%  Similarity=0.281  Sum_probs=119.5

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccC---CCCCC
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLK---HNQFS   98 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~---~~~~~   98 (251)
                      .+.+++.|+.|||++||+|+||+|+|  |+++.++.+||+|||++.....     .....++..|+|||++.   ...++
T Consensus       126 ~~~qi~~al~~LH~~gi~H~dl~p~n--ili~~~~~~kL~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~  198 (313)
T cd06633         126 ITHGALQGLAYLHSHNMIHRDIKAGN--ILLTEPGQVKLADFGSASKSSP-----ANSFVGTPYWMAPEVILAMDEGQYD  198 (313)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCChhh--EEECCCCCEEEeecCCCcccCC-----CCCccccccccChhhccccCCCCCC
Confidence            45678899999999999999999999  9999999999999999864322     23446778899999984   35678


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .++||||||+++|+|++ |..||.+.........+............++..+.+++.+||+.+|.+||++.+++.+.+
T Consensus       199 ~~sDv~slGvil~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~  275 (313)
T cd06633         199 GKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDF  275 (313)
T ss_pred             chhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence            89999999999999999 999998876655555543333222233457788999999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.95  E-value=6.6e-28  Score=202.79  Aligned_cols=172  Identities=15%  Similarity=0.223  Sum_probs=126.0

Q ss_pred             cccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||++.+++.+.+...         ....+.+++.||+|||+++|+||||||+|  |+++.++.+|++|||.+......
T Consensus        77 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~N--ili~~~~~~kl~d~~~~~~~~~~  154 (314)
T cd08216          77 VSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASH--ILLSGDGKVVLSGLRYSVSMIKH  154 (314)
T ss_pred             EEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcce--EEEecCCceEEecCccceeeccc
Confidence            56888877776655432         23356778899999999999999999999  99999999999999988753221


Q ss_pred             ce------eecCCCCcCcccCCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHH-HHHHhcCCC----
Q psy2787          73 CY------VMTERKPLPCPWCPMESLKH--NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQIL-QKIDREGER----  139 (251)
Q Consensus        73 ~~------~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~-~~i~~~~~~----  139 (251)
                      ..      .......++..|+|||++..  ..++.++|+||+||++|||++ |..||.+....... +.+ .....    
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~-g~~pf~~~~~~~~~~~~~-~~~~~~~~~  232 (314)
T cd08216         155 GKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELAN-GHVPFKDMPATQMLLEKV-RGTVPCLLD  232 (314)
T ss_pred             cccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHH-hccCccccc
Confidence            11      01123345667999999875  357889999999999999999 99999876543322 222 11000    


Q ss_pred             ----------------------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         140 ----------------------------LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       140 ----------------------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                                  .......+.++.+++.+||..||++|||+.++++|.+-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~  298 (314)
T cd08216         233 KSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFF  298 (314)
T ss_pred             cCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchH
Confidence                                        00011234578899999999999999999999998663

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.95  E-value=7.3e-28  Score=201.03  Aligned_cols=171  Identities=16%  Similarity=0.171  Sum_probs=129.2

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||. .++|.+.+....        ...+.|+++||+|||++||+|+||+|+|  |+++.++.+||+|||++......
T Consensus        79 lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~n--ill~~~~~~~l~dfg~~~~~~~~  155 (298)
T cd07841          79 LVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNN--LLIASDGVLKLADFGLARSFGSP  155 (298)
T ss_pred             EEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhh--EEEcCCCCEEEccceeeeeccCC
Confidence            357888 788877665432        3456778899999999999999999999  99999999999999999875443


Q ss_pred             ceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER------------  139 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~------------  139 (251)
                      .. ......++..|+|||.+.+ ..++.++|+|||||++|||++ |..||.+....+....+...-..            
T Consensus       156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (298)
T cd07841         156 NR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLL-RVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSL  233 (298)
T ss_pred             Cc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHc-CCccccCCccHHHHHHHHHHcCCCchhhhhhcccc
Confidence            21 1223345677999998864 457889999999999999999 98888776654444333221000            


Q ss_pred             ---------CC-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 ---------LP-----RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 ---------~~-----~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                               .+     .....+.++.+++.+||..+|++|||+.+++++-+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~  284 (298)
T cd07841         234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY  284 (298)
T ss_pred             cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCcc
Confidence                     00     01345678999999999999999999999999744

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>KOG0574|consensus

Probab=99.95  E-value=1.7e-29  Score=201.84  Aligned_cols=172  Identities=16%  Similarity=0.271  Sum_probs=139.8

Q ss_pred             CcccccchhHHHHHhcCCCCCCC--------chhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCRKPL--------PPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~~--------~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+|||..|+.-+-+..-.+.+.        +..++||+|||...-||||||..|  ||++.+|.+||+|||.|..+.+.
T Consensus       105 IVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGN--ILLNT~G~AKLADFGVAGQLTDT  182 (502)
T KOG0574|consen  105 IVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGN--ILLNTDGIAKLADFGVAGQLTDT  182 (502)
T ss_pred             eehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhccccc--EEEcccchhhhhhccccchhhhh
Confidence            46899999999987764433332        333589999999999999999999  99999999999999999876654


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh-cCCCCCCCCCCcHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR-EGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~  151 (251)
                      . .+.++..||+.|||||++..-.|+.++||||+|++..||.. |++||.+..+......|-. ....+..|+.++.++.
T Consensus       183 M-AKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAE-G~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~  260 (502)
T KOG0574|consen  183 M-AKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAE-GRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFN  260 (502)
T ss_pred             H-HhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhc-CCCCcccccccceeEeccCCCCCCCCChHhhhhHHH
Confidence            3 34567789999999999999999999999999999999999 9999988765443333311 1122234567888999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +++++||.+.|++|-|+.++++|..
T Consensus       261 DFi~~CLiK~PE~R~TA~~L~~H~F  285 (502)
T KOG0574|consen  261 DFIRSCLIKKPEERKTALRLCEHTF  285 (502)
T ss_pred             HHHHHHhcCCHHHHHHHHHHhhhhh
Confidence            9999999999999999999998853

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.95  E-value=9.7e-28  Score=203.94  Aligned_cols=171  Identities=16%  Similarity=0.150  Sum_probs=127.5

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      |.+||++ ++|.......      ...++.+++.||+|||++||+||||||+|  |+++.++.+||+|||++........
T Consensus        86 lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~n--ill~~~~~~kl~d~g~~~~~~~~~~  162 (337)
T cd07852          86 LVFEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSN--ILLNSDCRVKLADFGLARSLSELEE  162 (337)
T ss_pred             EEecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEEcCCCcEEEeeccchhccccccc
Confidence            3567776 4666655432      12356788899999999999999999999  9999999999999999986433221


Q ss_pred             ----eecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC----------
Q psy2787          75 ----VMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER----------  139 (251)
Q Consensus        75 ----~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~----------  139 (251)
                          .......++..|+|||++.+ ..++.++||||||+++|+|++ |+.||.+....+....+......          
T Consensus       163 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07852         163 NPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLL-GKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK  241 (337)
T ss_pred             cccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence                12223457788999998765 457889999999999999999 99999876544433332211100          


Q ss_pred             ----------------C---CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         140 ----------------L---PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       140 ----------------~---~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                                      .   ...+.++.++.+++.+||+.+|++|||+.+++++-
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~  296 (337)
T cd07852         242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHP  296 (337)
T ss_pred             hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhCh
Confidence                            0   01133688999999999999999999999999874

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.1e-27  Score=194.79  Aligned_cols=168  Identities=22%  Similarity=0.318  Sum_probs=134.8

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||.+.++|.+.....       ...++.+++.||.|||++||+||||+|+|  |+++.++.++|+|||++........
T Consensus        77 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~n--i~i~~~~~~~l~d~~~~~~~~~~~~  154 (254)
T cd06627          77 ILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAAN--ILTTKDGVVKLADFGVATKLNDVSK  154 (254)
T ss_pred             EEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHH--EEECCCCCEEEeccccceecCCCcc
Confidence            46777777777655432       12456778899999999999999999999  9999999999999999987544322


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALM  154 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li  154 (251)
                       ......++..|+|||.+.+...+.++|+||+|+++|++++ |..||...........+. .......+..++..+.+++
T Consensus       155 -~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i  231 (254)
T cd06627         155 -DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLT-GNPPYYDLNPMAALFRIV-QDDHPPLPEGISPELKDFL  231 (254)
T ss_pred             -cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHh-CCCCCCCccHHHHHHHHh-ccCCCCCCCCCCHHHHHHH
Confidence             1233456778999999988778899999999999999999 999998776555444443 3444456677899999999


Q ss_pred             HHHhccCCCCCCCHHHHHHH
Q psy2787         155 RQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       155 ~~cl~~dP~~Rps~~~il~~  174 (251)
                      .+||..+|++|||+.+++.+
T Consensus       232 ~~~l~~~p~~R~~~~~~l~~  251 (254)
T cd06627         232 MQCFQKDPNLRPTAKQLLKH  251 (254)
T ss_pred             HHHHhCChhhCcCHHHHhcC
Confidence            99999999999999998864

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.95  E-value=4.4e-28  Score=196.21  Aligned_cols=161  Identities=17%  Similarity=0.188  Sum_probs=125.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.++|.+.....       ...++.|++.||+|||+++|+||||||+|  |+++.++.++++|||.+...... 
T Consensus        62 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~~l~df~~~~~~~~~-  138 (237)
T cd05576          62 LVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNN--ILLDDRGHIQLTYFSRWSEVEDS-  138 (237)
T ss_pred             EEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH--EEEcCCCCEEEecccchhccccc-
Confidence            468999999888765322       23355678899999999999999999999  99999999999999988764432 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         .....++..|+|||++.+..++.++|+||+|+++|||++ |..|+......     + ........+..++..+.++
T Consensus       139 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~-g~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~l  208 (237)
T cd05576         139 ---CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLT-GKTLVECHPSG-----I-NTHTTLNIPEWVSEEARSL  208 (237)
T ss_pred             ---cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHH-CcchhhcCchh-----c-ccccccCCcccCCHHHHHH
Confidence               122344567999999988888999999999999999999 99887543211     1 1122334556788999999


Q ss_pred             HHHHhccCCCCCCCH-----HHHHHH
Q psy2787         154 MRQCWSKNPAERPKF-----STLKDC  174 (251)
Q Consensus       154 i~~cl~~dP~~Rps~-----~~il~~  174 (251)
                      +.+||+.||++|+++     .+++.|
T Consensus       209 i~~~l~~dp~~R~~~~~~~~~~~~~h  234 (237)
T cd05576         209 LQQLLQFNPTERLGAGVAGVEDIKSH  234 (237)
T ss_pred             HHHHccCCHHHhcCCCccchHHHHcC
Confidence            999999999999986     555544

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.95  E-value=8.9e-28  Score=200.13  Aligned_cols=168  Identities=17%  Similarity=0.160  Sum_probs=125.6

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+.. +|.+.+...        ....+.|++.||+|||+++|+|+||||+|  |+++.++.+||+|||++.......
T Consensus        84 v~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~n--ili~~~~~~~l~d~g~~~~~~~~~  160 (293)
T cd07843          84 VMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSN--LLLNNRGILKICDFGLAREYGSPL  160 (293)
T ss_pred             EehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHH--EEECCCCcEEEeecCceeeccCCc
Confidence            4677763 555443321        22456778899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC--------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE--------------  138 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~--------------  138 (251)
                       .......++..|+|||.+.+.. ++.++|+||+|+++|+|++ |..||.+....+....+...-.              
T Consensus       161 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (293)
T cd07843         161 -KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLT-KKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELP  238 (293)
T ss_pred             -cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccc
Confidence             1223345677899999987643 6889999999999999999 9999988766554443321100              


Q ss_pred             ---------------CCCCCCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         139 ---------------RLPRPEA-CPVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       139 ---------------~~~~~~~-~~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                                     ....+.. ++..+.+++++||+.+|++|||+.+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~  290 (293)
T cd07843         239 GAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH  290 (293)
T ss_pred             hhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence                           0001112 47789999999999999999999999876

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.95  E-value=1.7e-27  Score=198.79  Aligned_cols=153  Identities=20%  Similarity=0.316  Sum_probs=119.5

Q ss_pred             CCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCC---
Q psy2787          21 KPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQ---   96 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---   96 (251)
                      ..+.++++||+|||+ .+|+||||+|+|  |+++.++.+||+|||++........  .....++..|+|||++.+..   
T Consensus       118 ~i~~~i~~~l~~lH~~~~i~H~dl~p~n--ill~~~~~~kL~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~  193 (296)
T cd06618         118 KMTVAIVKALHYLKEKHGVIHRDVKPSN--ILLDASGNVKLCDFGISGRLVDSKA--KTRSAGCAAYMAPERIDPPDPNP  193 (296)
T ss_pred             HHHHHHHHHHHHHHhhCCEecCCCcHHH--EEEcCCCCEEECccccchhccCCCc--ccCCCCCccccCHhhcCCCCCcc
Confidence            467788899999997 599999999999  9999999999999999876543321  12334667899999987543   


Q ss_pred             -CCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCC-CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy2787          97 -FSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGE-RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKD  173 (251)
Q Consensus        97 -~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~-~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~  173 (251)
                       ++.++||||||+++|+|++ |+.||..... .+....+..... ..+....++.++.+++.+||..||++||++.+++.
T Consensus       194 ~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  272 (296)
T cd06618         194 KYDIRADVWSLGISLVELAT-GQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ  272 (296)
T ss_pred             ccccchhHHHHHHHHHHHHh-CCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence             7889999999999999999 9999976432 334444433321 22222347889999999999999999999999999


Q ss_pred             HHHhh
Q psy2787         174 CLYRL  178 (251)
Q Consensus       174 ~l~~~  178 (251)
                      +.+..
T Consensus       273 ~~~~~  277 (296)
T cd06618         273 HPFIR  277 (296)
T ss_pred             Chhhh
Confidence            87643

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=7.2e-28  Score=204.80  Aligned_cols=170  Identities=15%  Similarity=0.187  Sum_probs=126.3

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+. ++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++...... 
T Consensus        87 v~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~N--il~~~~~~~kL~Dfg~~~~~~~~~-  162 (337)
T cd07858          87 VYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSN--LLLNANCDLKICDFGLARTTSEKG-  162 (337)
T ss_pred             EEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH--EEEcCCCCEEECcCccccccCCCc-
Confidence            467775 4566554322       23456788899999999999999999999  999999999999999998754332 


Q ss_pred             eecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh------------------
Q psy2787          75 VMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR------------------  135 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~------------------  135 (251)
                      .......++..|+|||++.. ..++.++||||||+++|+|++ |..||.+.+.......+..                  
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07858         163 DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLG-RKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA  241 (337)
T ss_pred             ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence            11223356778999998765 458899999999999999999 9999977543322221110                  


Q ss_pred             -----c-CC--CC---CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         136 -----E-GE--RL---PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       136 -----~-~~--~~---~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                           . ..  ..   ...+.++.++.+++.+||..+|++|||+.++++|.+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~  293 (337)
T cd07858         242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPY  293 (337)
T ss_pred             hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcc
Confidence                 0 00  00   012457889999999999999999999999999844

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.95  E-value=1.2e-27  Score=198.20  Aligned_cols=169  Identities=15%  Similarity=0.124  Sum_probs=124.5

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||.+ +++.+.+....         ...+.++++||+|||+++++||||+|+|  |+++.++.++|+|||+++.....
T Consensus        76 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~n--il~~~~~~~~l~df~~~~~~~~~  152 (283)
T cd07835          76 VFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQN--LLIDREGALKLADFGLARAFGVP  152 (283)
T ss_pred             EEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHH--EEEcCCCcEEEeecccccccCCC
Confidence            456764 35555443322         2345678899999999999999999999  99999999999999999764332


Q ss_pred             ceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER------------  139 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~------------  139 (251)
                      .. ......++..|+|||++.+. .++.++|+||||+++|+|++ |..||.+.+.......+......            
T Consensus       153 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd07835         153 VR-TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVN-RRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSL  230 (283)
T ss_pred             cc-ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhc
Confidence            11 12233457789999988764 46889999999999999999 99999876554333222111000            


Q ss_pred             ---------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         140 ---------------LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       140 ---------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                                     ....+.++..+.+++.+||+.+|++|||+.+++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~  281 (283)
T cd07835         231 PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHP  281 (283)
T ss_pred             hhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCC
Confidence                           011245678899999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>KOG3653|consensus

Probab=99.95  E-value=5.8e-28  Score=202.67  Aligned_cols=180  Identities=14%  Similarity=0.225  Sum_probs=141.7

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhC---------CcccCCCCCCCceEEEccCCceEEccCCC
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVN---------NICSCQFSSSSLLILFFSSSSSSSGDFGM   65 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~---------~iiHrdlkp~ni~il~~~~~~~kl~DFGl   65 (251)
                      +++||++.|+|.++++..      +.+.+.-+++||+|||+.         .|+|||||+.|  ||+..++++.|+|||+
T Consensus       285 LVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkN--VLvK~DlTccIaDFGL  362 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKN--VLVKNDLTCCIADFGL  362 (534)
T ss_pred             EEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccc--eEEccCCcEEeeccce
Confidence            468999999999998864      455677778999999984         69999999999  9999999999999999


Q ss_pred             CcccCCCc-eeecCCCCcCcccCCCcccCCCC-CC-----chhHHHHHHHHHHHHHhC------C-----CCCCC-----
Q psy2787          66 MRYSQNDC-YVMTERKPLPCPWCPMESLKHNQ-FS-----QASDAWMFGVTIWEMFTF------G-----AEPWV-----  122 (251)
Q Consensus        66 a~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~-~~-----~~~Di~S~G~il~el~~~------g-----~~pf~-----  122 (251)
                      |..+.... ........||.+|||||++.+.- +.     .+.||||+|.++|||++.      |     ++||.     
T Consensus       363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~  442 (534)
T KOG3653|consen  363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN  442 (534)
T ss_pred             eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence            99854322 12334478999999999998632 22     478999999999999981      1     12443     


Q ss_pred             CCChhHHHHHHHhcCCCCCCCCC-----CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         123 GLNGMQILQKIDREGERLPRPEA-----CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       123 ~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ..+..++...+.+++.|+.+++.     ...-+.+.+..||+.||+.|.|+.-+.+++..+....
T Consensus       443 hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  443 HPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             CCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            23446677777788888877643     3346789999999999999999999999998876543

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.95  E-value=1.1e-27  Score=199.18  Aligned_cols=172  Identities=16%  Similarity=0.184  Sum_probs=131.1

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+....       ...+.|+++||+|||+.+++||||+|.|  |+++.++.++|+|||+++......
T Consensus        82 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~n--il~~~~~~~~l~dfg~~~~~~~~~  159 (288)
T cd05583          82 LILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLEN--ILLDSEGHVVLTDFGLSKEFLAEE  159 (288)
T ss_pred             EEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH--eEECCCCCEEEEECcccccccccc
Confidence            4578998888887654321       2235578899999999999999999999  999999999999999988744332


Q ss_pred             eeecCCCCcCcccCCCcccCCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCCC----hhHHHHHHHhcCCCCCCCCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQ--FSQASDAWMFGVTIWEMFTFGAEPWVGLN----GMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~S~G~il~el~~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ........++..|++||.+.+..  .+.++|+||||+++|+|++ |..||....    ..++...+..  ...+.+..++
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~t-g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  236 (288)
T cd05583         160 EERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLT-GASPFTVDGEQNSQSEISRRILK--SKPPFPKTMS  236 (288)
T ss_pred             ccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHh-CCCCcccCcccchHHHHHHHHHc--cCCCCCcccC
Confidence            22233345778899999987654  6789999999999999999 999996432    2233333322  2334556688


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ..+.+++.+||+.+|++|||+.++.+.|..
T Consensus       237 ~~l~~li~~~l~~~p~~R~t~~~~~~~l~~  266 (288)
T cd05583         237 AEARDFIQKLLEKDPKKRLGANGADEIKNH  266 (288)
T ss_pred             HHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence            899999999999999999997766555443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>KOG0986|consensus

Probab=99.95  E-value=3.5e-28  Score=203.21  Aligned_cols=149  Identities=14%  Similarity=0.163  Sum_probs=124.0

Q ss_pred             CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCc
Q psy2787          20 RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQ   99 (251)
Q Consensus        20 ~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~   99 (251)
                      ..+..+|+.||++||..+|++||+||+|  ||+|+.|++.|+|+|+|..+....  ......||.+|||||++.+..|+.
T Consensus       290 ~FYAAEi~cGLehlH~~~iVYRDLKPeN--ILLDd~GhvRISDLGLAvei~~g~--~~~~rvGT~GYMAPEvl~ne~Y~~  365 (591)
T KOG0986|consen  290 RFYAAEIICGLEHLHRRRIVYRDLKPEN--ILLDDHGHVRISDLGLAVEIPEGK--PIRGRVGTVGYMAPEVLQNEVYDF  365 (591)
T ss_pred             HHHHHHHHhhHHHHHhcceeeccCChhh--eeeccCCCeEeeccceEEecCCCC--ccccccCcccccCHHHHcCCcccC
Confidence            3457788999999999999999999999  999999999999999999865543  334458999999999999999999


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCCh----hHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-----HHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNG----MQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK-----FST  170 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps-----~~~  170 (251)
                      ..|.||+||++|||+. |+.||.....    +++-+.+....  ...++..+++++++++..|..||++|..     +++
T Consensus       366 s~Dwf~lGCllYemi~-G~sPFr~~KeKvk~eEvdrr~~~~~--~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~e  442 (591)
T KOG0986|consen  366 SPDWFSLGCLLYEMIA-GHSPFRQRKEKVKREEVDRRTLEDP--EEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQE  442 (591)
T ss_pred             CccHHHHHhHHHHHHc-ccCchhhhhhhhhHHHHHHHHhcch--hhcccccCHHHHHHHHHHHccCHHHhccCCCcCcch
Confidence            9999999999999999 9999965432    34444554332  3345789999999999999999999965     457


Q ss_pred             HHHHH
Q psy2787         171 LKDCL  175 (251)
Q Consensus       171 il~~l  175 (251)
                      +.+|.
T Consensus       443 vk~Hp  447 (591)
T KOG0986|consen  443 VKEHP  447 (591)
T ss_pred             hhhCc
Confidence            77663

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.95  E-value=5.7e-28  Score=198.43  Aligned_cols=171  Identities=18%  Similarity=0.208  Sum_probs=130.8

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~~~~~   73 (251)
                      .+||+..++|.+.+...       ....+.|++.||+|||++|++|+||+|+|  |+++.++ .+||+|||.+.......
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~n--il~~~~~~~~~l~dfg~~~~~~~~~  158 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGAN--LLIDSTGQRLRIADFGAAARLAAKG  158 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCCEEEEccccccccccccc
Confidence            46788777776654321       23456788899999999999999999999  8888776 69999999988754331


Q ss_pred             ee---ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHH---HHHHHhcCCCCCCCCCCc
Q psy2787          74 YV---MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQI---LQKIDREGERLPRPEACP  147 (251)
Q Consensus        74 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~---~~~i~~~~~~~~~~~~~~  147 (251)
                      ..   ......++..|+|||++.+..++.++|+||+|+++|++++ |..||........   ...+.........+...+
T Consensus       159 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (268)
T cd06630         159 TGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMAT-AKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS  237 (268)
T ss_pred             ccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHh-CCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence            11   1123456778999999988888999999999999999999 9999975443222   222222333445556788


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      .++.+++.+||..+|++||++.+++++.
T Consensus       238 ~~~~~~i~~~l~~~p~~R~~~~~ll~~~  265 (268)
T cd06630         238 PGLRDVTLRCLELQPEDRPPSRELLKHP  265 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHhcCc
Confidence            9999999999999999999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.95  E-value=3e-28  Score=199.19  Aligned_cols=166  Identities=18%  Similarity=0.212  Sum_probs=132.7

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+..++|.+.+...       ....+.+++.||.|||+++|+|+||+|+|  |++++++.++|+|||++....... 
T Consensus        78 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~n--il~~~~~~~~l~d~~~~~~~~~~~-  154 (258)
T cd05578          78 VVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDN--ILLDEQGHVHITDFNIATKVTPDT-  154 (258)
T ss_pred             EEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH--eEEcCCCCEEEeecccccccCCCc-
Confidence            57888888888766543       12346678899999999999999999999  999999999999999988654332 


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh---hHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG---MQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                       ......++..|+|||++.+..++.++|+||+|+++|++++ |..||...+.   ..+....  .......+..++.++.
T Consensus       155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  230 (258)
T cd05578         155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLR-GKRPYRGHSRTIRDQIRAKQ--ETADVLYPATWSTEAI  230 (258)
T ss_pred             -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHh-CCCCCCCCCccHHHHHHHHh--ccccccCcccCcHHHH
Confidence             2234557778999999988888999999999999999999 9999987663   3333332  1144555677889999


Q ss_pred             HHHHHHhccCCCCCCCH--HHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKF--STLKDC  174 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~--~~il~~  174 (251)
                      +++.+||..||.+||++  ++++++
T Consensus       231 ~~i~~~l~~~p~~R~~~~~~~l~~~  255 (258)
T cd05578         231 DAINKLLERDPQKRLGDNLKDLKNH  255 (258)
T ss_pred             HHHHHHccCChhHcCCccHHHHhcC
Confidence            99999999999999999  776654

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.95  E-value=2.8e-27  Score=196.08  Aligned_cols=169  Identities=15%  Similarity=0.130  Sum_probs=124.3

Q ss_pred             cccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||+. +++.......         ....+.+++.||+|||+.+|+|+||+|+|  |+++.++.+||+|||++......
T Consensus        77 v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~n--ill~~~~~~~l~dfg~~~~~~~~  153 (284)
T cd07860          77 VFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN--LLINTEGAIKLADFGLARAFGVP  153 (284)
T ss_pred             Eeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEECCCCCEEEeeccchhhcccC
Confidence            567775 4565544321         12345678899999999999999999999  99999999999999998764332


Q ss_pred             ceeecCCCCcCcccCCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-----------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-----------  140 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-----------  140 (251)
                      . .......++..|+|||++.+.. ++.++||||||+++|+|++ |..||.+.+.......+......+           
T Consensus       154 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (284)
T cd07860         154 V-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSL  231 (284)
T ss_pred             c-cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHH
Confidence            1 1122334577899999887644 5789999999999999999 999998765433332221110000           


Q ss_pred             ----------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         141 ----------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       141 ----------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                                      ...+.++.++.+++.+||..||++|||+.+++.|-
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~  282 (284)
T cd07860         232 PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHP  282 (284)
T ss_pred             HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCC
Confidence                            00134677889999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.95  E-value=5.9e-28  Score=205.05  Aligned_cols=173  Identities=19%  Similarity=0.181  Sum_probs=128.4

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+. ++|.+.....       ....+.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++........
T Consensus        86 v~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N--il~~~~~~~kl~dfg~~~~~~~~~~  162 (334)
T cd07855          86 VMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSN--LLVNEDCELRIGDFGMARGLSSSPT  162 (334)
T ss_pred             EEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEEcCCCcEEecccccceeecccCc
Confidence            467775 5676655422       23345678899999999999999999999  9999999999999999986433221


Q ss_pred             e---ecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh---------------
Q psy2787          75 V---MTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR---------------  135 (251)
Q Consensus        75 ~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~---------------  135 (251)
                      .   ......++..|+|||.+.+ ..++.++||||+|+++|||++ |..||.+.+.......+..               
T Consensus       163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~-g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  241 (334)
T cd07855         163 EHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLG-RRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS  241 (334)
T ss_pred             CCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHc-CCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence            1   1123467788999998865 457899999999999999999 9999987654332222111               


Q ss_pred             ---------cCCCCCC-----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         136 ---------EGERLPR-----PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       136 ---------~~~~~~~-----~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                               .......     .+..+.++.+++.+||+.+|++||++.+++.+.+--
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~  298 (334)
T cd07855         242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLA  298 (334)
T ss_pred             hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence                     0001111     134678999999999999999999999999986654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.95  E-value=1.4e-27  Score=184.49  Aligned_cols=146  Identities=14%  Similarity=0.151  Sum_probs=113.6

Q ss_pred             CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCC
Q psy2787          19 CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFS   98 (251)
Q Consensus        19 ~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~   98 (251)
                      +..++.|+++||+|||+++      ||+|  |+++.++.+|+  ||+++.....      ...+++.|||||++.+..++
T Consensus        19 ~~~i~~qi~~~L~~lH~~~------kp~N--il~~~~~~~~~--fG~~~~~~~~------~~~g~~~y~aPE~~~~~~~~   82 (176)
T smart00750       19 IWAVCLQCLRALRELHRQA------KSGN--ILLTWDGLLKL--DGSVAFKTPE------QSRVDPYFMAPEVIQGQSYT   82 (176)
T ss_pred             HHHHHHHHHHHHHHHHhcC------Cccc--EeEcCccceee--ccceEeeccc------cCCCcccccChHHhcCCCCc
Confidence            3456788899999999998      9999  99999999999  9998875432      12567889999999999999


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCC-----CCCCCCcH--HHHHHHHHHhccCCCCCCCHHH
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERL-----PRPEACPV--EVYALMRQCWSKNPAERPKFST  170 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~-----~~~~~~~~--~~~~li~~cl~~dP~~Rps~~~  170 (251)
                      .++|||||||++|||++ |..||..... ......+.......     +.+...+.  ++.+++.+||..+|++||++.+
T Consensus        83 ~~~DiwSlG~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~  161 (176)
T smart00750       83 EKADIYSLGITLYEALD-YELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANH  161 (176)
T ss_pred             chhhHHHHHHHHHHHHh-CCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHH
Confidence            99999999999999999 9999976433 22233332211111     11122333  6899999999999999999999


Q ss_pred             HHHHHHhhcHH
Q psy2787         171 LKDCLYRLTPA  181 (251)
Q Consensus       171 il~~l~~~~~~  181 (251)
                      ++++++.....
T Consensus       162 ll~~~~~~~~~  172 (176)
T smart00750      162 YLAHCRALFAE  172 (176)
T ss_pred             HHHHHHHHHHH
Confidence            99999877544

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.95  E-value=1.4e-27  Score=198.43  Aligned_cols=151  Identities=19%  Similarity=0.328  Sum_probs=117.2

Q ss_pred             CCCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC---C
Q psy2787          21 KPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN---Q   96 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~   96 (251)
                      ..+.+++.||+|||+. +|+||||||+|  |+++.++.+||+|||+++......  ......++..|+|||++.+.   .
T Consensus       111 ~i~~~i~~~l~~lh~~~~i~H~dlkp~N--il~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~  186 (288)
T cd06616         111 KIAVATVKALNYLKEELKIIHRDVKPSN--ILLDRNGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMAPERIDPSARDG  186 (288)
T ss_pred             HHHHHHHHHHHHHhhcCCeeccCCCHHH--EEEccCCcEEEeecchhHHhccCC--ccccccCccCccCHHHhccccccC
Confidence            4566778999999975 99999999999  999999999999999997644322  12334577889999998866   6


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCC----CCCCCcHHHHHHHHHHhccCCCCCCCHHHH
Q psy2787          97 FSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLP----RPEACPVEVYALMRQCWSKNPAERPKFSTL  171 (251)
Q Consensus        97 ~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~----~~~~~~~~~~~li~~cl~~dP~~Rps~~~i  171 (251)
                      ++.++||||+|+++|+|++ |..||..... .+....+.. +..+.    .+..++.++.+++.+||..+|++|||+.++
T Consensus       187 ~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i  264 (288)
T cd06616         187 YDVRSDVWSLGITLYEVAT-GKFPYPKWNSVFDQLTQVVK-GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKEL  264 (288)
T ss_pred             CcchhhhhHHHHHHHHHHh-CCCCchhcchHHHHHhhhcC-CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHH
Confidence            8899999999999999999 9999976542 122222211 11111    123478899999999999999999999999


Q ss_pred             HHHHHh
Q psy2787         172 KDCLYR  177 (251)
Q Consensus       172 l~~l~~  177 (251)
                      +.+-+-
T Consensus       265 ~~~~~~  270 (288)
T cd06616         265 LEHPFI  270 (288)
T ss_pred             hcChhh
Confidence            998553

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.95  E-value=1e-27  Score=203.05  Aligned_cols=173  Identities=18%  Similarity=0.243  Sum_probs=123.6

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||+..+++.+......         ..++.|++.||+|||+++|+||||||+|  |+++.++.+|++||+.+......
T Consensus        77 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~N--ill~~~~~~~~~~~~~~~~~~~~  154 (328)
T cd08226          77 ISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASH--ILISGDGLVSLSGLSHLYSLVRN  154 (328)
T ss_pred             EEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEeCCCcEEEechHHHhhhhcc
Confidence            456766666665443211         2356788899999999999999999999  99999999999999865432111


Q ss_pred             ce------eecCCCCcCcccCCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC------
Q psy2787          73 CY------VMTERKPLPCPWCPMESLKHN--QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE------  138 (251)
Q Consensus        73 ~~------~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~------  138 (251)
                      ..      .......++..|+|||++.+.  .++.++||||+||++|+|++ |..||.+...............      
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~  233 (328)
T cd08226         155 GQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELAT-GRVPFQDMLRTQMLLQKLKGPPYSPLDI  233 (328)
T ss_pred             CccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCcChHHHHHHHhcCCCCCCccc
Confidence            00      001112345679999999763  47899999999999999999 9999987654333222211100      


Q ss_pred             ---------------------------------------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         139 ---------------------------------------RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       139 ---------------------------------------~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                                             ..+.+..++..+.+++.+||..||++|||+.++++|.+-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~  311 (328)
T cd08226         234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF  311 (328)
T ss_pred             cccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence                                                   001122356789999999999999999999999998764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.95  E-value=1.5e-27  Score=194.21  Aligned_cols=171  Identities=24%  Similarity=0.329  Sum_probs=136.2

Q ss_pred             cccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||.+.++|.+.+....       ...+.+++.||+|||+.+++|+||+|+|  |+++.++.+||+|||.+........
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~n--i~i~~~~~~~l~d~~~~~~~~~~~~  156 (260)
T cd06606          79 FLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGAN--ILVDSDGVVKLADFGCAKRLGDIET  156 (260)
T ss_pred             EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH--EEEcCCCCEEEcccccEEecccccc
Confidence            567887777777654321       2356778899999999999999999999  9999999999999999887554422


Q ss_pred             e-ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-hhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          75 V-MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN-GMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        75 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      . ......++..|++||.+.+...+.++||||||+++|++++ |..||.... .......+.........+...+..+.+
T Consensus       157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  235 (260)
T cd06606         157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMAT-GKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKD  235 (260)
T ss_pred             cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHH
Confidence            1 1234567778999999988888999999999999999999 999998765 233333333334445566778999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.+|++.+|++||++.+++.|-
T Consensus       236 ~i~~~l~~~p~~Rp~~~~ll~~~  258 (260)
T cd06606         236 FLRKCLRRDPKKRPTADELLQHP  258 (260)
T ss_pred             HHHHhCcCChhhCCCHHHHhhCC
Confidence            99999999999999999999864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.95  E-value=1.5e-27  Score=197.62  Aligned_cols=170  Identities=16%  Similarity=0.198  Sum_probs=127.1

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++. +|.+.+...        ....+.+++.||+|||+.+++|+||+|+|  |++++++.+||+|||++.......
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~n--il~~~~~~~~l~d~g~~~~~~~~~  154 (287)
T cd07840          78 VFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSN--ILINNDGVLKLADFGLARPYTKRN  154 (287)
T ss_pred             Eeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHH--eEEcCCCCEEEccccceeeccCCC
Confidence            5677763 666654432        23456677899999999999999999999  999999999999999998754433


Q ss_pred             eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL------------  140 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~------------  140 (251)
                      ........++..|+|||.+.+ ..++.++||||||+++|+|++ |..||.+.+.......+......+            
T Consensus       155 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (287)
T cd07840         155 SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFL-GKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP  233 (287)
T ss_pred             cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence            222233456778999998765 457899999999999999999 999998776554444332211000            


Q ss_pred             ---------C--------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         141 ---------P--------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       141 ---------~--------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                               .        ....++.++.+++.+||..+|++||++.+++++-
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~  285 (287)
T cd07840         234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHE  285 (287)
T ss_pred             hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCc
Confidence                     0        0011378899999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.95  E-value=5.2e-28  Score=217.42  Aligned_cols=172  Identities=10%  Similarity=0.023  Sum_probs=119.7

Q ss_pred             cccccchhHHHHHhcCCC---------------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc
Q psy2787           2 SANFAELNAFQENYTEPC---------------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS   54 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~   54 (251)
                      .+||+..++|.+.+....                           ..++.|++.||+|||+++|+||||||+|  ||++.
T Consensus       213 V~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N--ILl~~  290 (566)
T PLN03225        213 VWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN--IIFSE  290 (566)
T ss_pred             EEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH--EEEeC
Confidence            568888887777654321                           1356778899999999999999999999  99985


Q ss_pred             -CCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC----------------------CCCchhHHHHHHHHHH
Q psy2787          55 -SSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN----------------------QFSQASDAWMFGVTIW  111 (251)
Q Consensus        55 -~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~----------------------~~~~~~Di~S~G~il~  111 (251)
                       ++.+||+|||+|+..............+++.|+|||.+...                      .++.++||||+||++|
T Consensus       291 ~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~  370 (566)
T PLN03225        291 GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFL  370 (566)
T ss_pred             CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHH
Confidence             57999999999986543332333455778899999965422                      1334569999999999


Q ss_pred             HHHhCCCCCCCCCChhHHHHHHHhcCCCC---------CC----------CCCCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy2787         112 EMFTFGAEPWVGLNGMQILQKIDREGERL---------PR----------PEACPVEVYALMRQCWSKNPAERPKFSTLK  172 (251)
Q Consensus       112 el~~~g~~pf~~~~~~~~~~~i~~~~~~~---------~~----------~~~~~~~~~~li~~cl~~dP~~Rps~~~il  172 (251)
                      ||++ +..++... ...+...+...+...         ..          .........+|+.+|+..||++|||+.+++
T Consensus       371 el~~-~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L  448 (566)
T PLN03225        371 QMAF-PNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAAL  448 (566)
T ss_pred             HHHh-CcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHh
Confidence            9998 77765432 111111111111100         00          011223456899999999999999999999


Q ss_pred             HHHHh
Q psy2787         173 DCLYR  177 (251)
Q Consensus       173 ~~l~~  177 (251)
                      +|.+-
T Consensus       449 ~Hpff  453 (566)
T PLN03225        449 AHPYF  453 (566)
T ss_pred             CCcCc
Confidence            98664

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.95  E-value=1.7e-27  Score=197.04  Aligned_cols=169  Identities=15%  Similarity=0.125  Sum_probs=127.8

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++. ++.+.+...        ...++.+++.||+|||+++|+|+||+|+|  |+++.++.+||+|||.+.......
T Consensus        76 v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~n--ili~~~~~~~l~df~~~~~~~~~~  152 (283)
T cd05118          76 VFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPEN--LLINTEGVLKLADFGLARSFGSPV  152 (283)
T ss_pred             EEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHH--EEECCCCcEEEeeeeeeEecCCCc
Confidence            4677764 555544331        12356778899999999999999999999  999999999999999988754432


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL------------  140 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~------------  140 (251)
                       .......++..|+|||.+.+. .++.++|+||+|+++|++++ |..||.+.+..+....+......+            
T Consensus       153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (283)
T cd05118         153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLS-RRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLA  230 (283)
T ss_pred             -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhh
Confidence             122234567789999998776 68899999999999999999 999998776555443332211000            


Q ss_pred             ----------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         141 ----------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       141 ----------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                                      ...+.++.++.+++.+||..||.+||++.+++.+-
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~  281 (283)
T cd05118         231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHP  281 (283)
T ss_pred             hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCC
Confidence                            01134678899999999999999999999998764

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.94  E-value=3.2e-27  Score=197.45  Aligned_cols=152  Identities=18%  Similarity=0.202  Sum_probs=117.2

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-CCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~   99 (251)
                      ..+.|++.||+|||+++|+|+||||+|  |+++.++.+||+|||++...............++..|+|||++.+. .++.
T Consensus       120 ~i~~qi~~aL~~LH~~~i~H~dl~p~n--ili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~  197 (302)
T cd07864         120 SFMKQLLEGLNYCHKKNFLHRDIKCSN--ILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGP  197 (302)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHH--EEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCc
Confidence            345678899999999999999999999  9999999999999999987544322222233456779999988653 4688


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC----------------------------CCCCCCcHHHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL----------------------------PRPEACPVEVY  151 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~----------------------------~~~~~~~~~~~  151 (251)
                      ++||||+||++|+|++ |+.||......+....+......+                            .....++..+.
T Consensus       198 ~~Di~slG~~~~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (302)
T cd07864         198 AIDVWSCGCILGELFT-KKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPAL  276 (302)
T ss_pred             hhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHH
Confidence            9999999999999999 999998765544443332210000                            01124688999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +++.+||..+|++||++.+++.+-
T Consensus       277 ~li~~~l~~~P~~Rp~~~~il~~~  300 (302)
T cd07864         277 DLLDHMLTLDPSKRCTAEEALNSP  300 (302)
T ss_pred             HHHHHHccCChhhCCCHHHHhcCC
Confidence            999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.94  E-value=1.8e-27  Score=200.11  Aligned_cols=152  Identities=16%  Similarity=0.181  Sum_probs=114.0

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc----CCceEEccCCCCcccCCCce--eecCCCCcCcccCCCcccCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS----SSSSSSGDFGMMRYSQNDCY--VMTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~----~~~~kl~DFGla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~   94 (251)
                      .++.|++.||+|||+.+|+||||||+|  |+++.    ++.+||+|||++........  .......++..|+|||++.+
T Consensus       112 ~i~~qi~~~l~~lH~~~i~h~dlkp~N--il~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (316)
T cd07842         112 SLLWQILNGVHYLHSNWVLHRDLKPAN--ILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLG  189 (316)
T ss_pred             HHHHHHHHHHHHHHhCCEeeCCCCHHH--EEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhC
Confidence            355688899999999999999999999  99998    89999999999987543321  12234467788999998876


Q ss_pred             C-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH---------HHHHHHh------------------------cCCCC
Q psy2787          95 N-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ---------ILQKIDR------------------------EGERL  140 (251)
Q Consensus        95 ~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~---------~~~~i~~------------------------~~~~~  140 (251)
                      . .++.++||||||+++|+|++ |..||.+.....         ....+..                        .....
T Consensus       190 ~~~~~~~~Dv~slG~~l~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (316)
T cd07842         190 ARHYTKAIDIWAIGCIFAELLT-LEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTK  268 (316)
T ss_pred             CCCCCcHHHHHHHHHHHHHHHh-cCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCC
Confidence            4 57899999999999999999 999997644321         0000000                        00000


Q ss_pred             CCC-----------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         141 PRP-----------EACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       141 ~~~-----------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ..+           ...+.++.+++.+||+.||++|||+.++++|-
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~  314 (316)
T cd07842         269 TYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHP  314 (316)
T ss_pred             CCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCC
Confidence            111           14567899999999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.94  E-value=1.3e-27  Score=197.38  Aligned_cols=170  Identities=18%  Similarity=0.221  Sum_probs=136.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ....+.|++.||+|||+.+++|+||+|+|  |+++.++.++++|||++.......
T Consensus        79 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~n--i~i~~~~~~~l~df~~~~~~~~~~  156 (280)
T cd05581          79 FVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPEN--ILLDKDMHIKITDFGTAKVLDPNS  156 (280)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH--eEECCCCCEEecCCccccccCCcc
Confidence            357888888888766433       22345677899999999999999999999  999999999999999988744322


Q ss_pred             e-------------------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy2787          74 Y-------------------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKID  134 (251)
Q Consensus        74 ~-------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~  134 (251)
                      .                   .......++..|+|||++....++.++|+||+|++++++++ |..||...........+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~  235 (280)
T cd05581         157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLT-GKPPFRGSNEYLTFQKIL  235 (280)
T ss_pred             ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHh-CCCCCCCccHHHHHHHHH
Confidence            1                   12233456788999999988888999999999999999999 999998877655555553


Q ss_pred             hcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH----HHHHHHH
Q psy2787         135 REGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKDCL  175 (251)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~----~~il~~l  175 (251)
                      .  .....+..+++.+.+++.+||..+|++||++    .+++.|.
T Consensus       236 ~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~  278 (280)
T cd05581         236 K--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHP  278 (280)
T ss_pred             h--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCC
Confidence            2  2334556788999999999999999999999    8887763

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.94  E-value=2.1e-27  Score=196.83  Aligned_cols=148  Identities=19%  Similarity=0.199  Sum_probs=118.0

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                      .+.+++.||+|||+.+|+|+||+|+|  |+++.++.+||+|||++.......  ......++..|+|||++.+..++.++
T Consensus       112 ~~~~i~~al~~LH~~~i~h~~l~~~n--ili~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~PE~~~~~~~~~~~  187 (287)
T cd07838         112 LMRQLLRGVDFLHSHRIVHRDLKPQN--ILVTSDGQVKIADFGLARIYSFEM--ALTSVVVTLWYRAPEVLLQSSYATPV  187 (287)
T ss_pred             HHHHHHHHHHHHHHCCeeeccCChhh--EEEccCCCEEEeccCcceeccCCc--ccccccccccccChHHhccCCCCCcc
Confidence            56777899999999999999999999  999999999999999988754331  11233467789999999988899999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-----------------C---CC-----CCCCcHHHHHHHHH
Q psy2787         102 DAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-----------------L---PR-----PEACPVEVYALMRQ  156 (251)
Q Consensus       102 Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-----------------~---~~-----~~~~~~~~~~li~~  156 (251)
                      |+||||+++|+|++ |..||.+....+....+...-..                 .   ..     .+..+..+.+++.+
T Consensus       188 Di~s~G~~l~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  266 (287)
T cd07838         188 DMWSVGCIFAELFR-RRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKK  266 (287)
T ss_pred             hhhhHHHHHHHHHh-CCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHH
Confidence            99999999999999 99999887766555544321000                 0   00     02345678899999


Q ss_pred             HhccCCCCCCCHHHHHHH
Q psy2787         157 CWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       157 cl~~dP~~Rps~~~il~~  174 (251)
                      ||+.||++||++.+++.|
T Consensus       267 ~l~~dp~~Rp~~~~il~~  284 (287)
T cd07838         267 MLTFNPHKRISAFEALQH  284 (287)
T ss_pred             HhccCCccCCCHHHHhcC
Confidence            999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.94  E-value=1.7e-27  Score=198.25  Aligned_cols=169  Identities=18%  Similarity=0.188  Sum_probs=121.3

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+. +++++.+...        ....+.|++.||+|||+.+|+|+||||+|  |+++.++.+||+|||+++......
T Consensus        81 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~N--il~~~~~~~~l~Dfg~~~~~~~~~  157 (291)
T cd07870          81 VFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQN--LLISYLGELKLADFGLARAKSIPS  157 (291)
T ss_pred             EEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHH--EEEcCCCcEEEeccccccccCCCC
Confidence            467776 5555543321        22345688899999999999999999999  999999999999999987633221


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChh-HHHHHHHh-cCCC-----------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM-QILQKIDR-EGER-----------  139 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~-~~~~~i~~-~~~~-----------  139 (251)
                      . ......++..|+|||++.+. .++.++||||||+++|+|++ |..||.+.... +....+.. .+..           
T Consensus       158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (291)
T cd07870         158 Q-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQ-GQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL  235 (291)
T ss_pred             C-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence            1 12233467789999998753 47889999999999999999 99999765432 11111110 0000           


Q ss_pred             ---------CCCC---------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         140 ---------LPRP---------EACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       140 ---------~~~~---------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                               ...+         ...+.++.+++.+|+..||++|||+.+++.|-
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~  289 (291)
T cd07870         236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHP  289 (291)
T ss_pred             ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCC
Confidence                     0000         11356889999999999999999999998763

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.6e-27  Score=191.68  Aligned_cols=168  Identities=20%  Similarity=0.232  Sum_probs=135.5

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||+..++|.+......       ...+.|++.||.|||+.+++|+||+|+|  |+++.++.++|+|||++.......
T Consensus        70 ~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~n--i~~~~~~~~~l~d~~~~~~~~~~~  147 (250)
T cd05123          70 LVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPEN--ILLDADGHIKLTDFGLAKELSSEG  147 (250)
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcce--EEEcCCCcEEEeecCcceecccCC
Confidence            3578887777777654331       2345677899999999999999999999  999999999999999988744321


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......++..|++||...+...+.++|+||||+++|++++ |..||...+.......+..  ...+.+...+..+.++
T Consensus       148 -~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~-g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~  223 (250)
T cd05123         148 -SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLT-GKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEARDL  223 (250)
T ss_pred             -CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHH
Confidence             12334566778999999988888899999999999999999 9999988776666666644  3455667789999999


Q ss_pred             HHHHhccCCCCCCCH---HHHHHH
Q psy2787         154 MRQCWSKNPAERPKF---STLKDC  174 (251)
Q Consensus       154 i~~cl~~dP~~Rps~---~~il~~  174 (251)
                      +.+||..||++||++   .+++.|
T Consensus       224 i~~~l~~~p~~R~~~~~~~~l~~~  247 (250)
T cd05123         224 ISGLLQKDPTKRLGSGGAEEIKAH  247 (250)
T ss_pred             HHHHhcCCHhhCCCcccHHHHHhC
Confidence            999999999999999   666554

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.94  E-value=2e-27  Score=201.94  Aligned_cols=153  Identities=16%  Similarity=0.163  Sum_probs=116.0

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce--eecCCCCcCcccCCCcccCC-CCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY--VMTERKPLPCPWCPMESLKH-NQF   97 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~   97 (251)
                      .++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.......  .......++..|+|||++.+ ..+
T Consensus       110 ~i~~ql~~aL~~LH~~~ivH~dlkp~N--ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  187 (336)
T cd07849         110 YFLYQILRGLKYIHSANVLHRDLKPSN--LLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGY  187 (336)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHH--EEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCC
Confidence            356688899999999999999999999  9999999999999999886433211  11123457888999998754 468


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc------------------------CCCCC-----CCCCCcH
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE------------------------GERLP-----RPEACPV  148 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~------------------------~~~~~-----~~~~~~~  148 (251)
                      +.++||||+|+++|+|++ |+.||.+.+.......+...                        .....     ..+..+.
T Consensus       188 ~~~~DvwslGvil~el~~-G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (336)
T cd07849         188 TKAIDIWSVGCILAEMLS-NRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADP  266 (336)
T ss_pred             CcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCc
Confidence            899999999999999999 99999775533222211100                        00000     0124567


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+++.+||+.+|++|||+.++++|.+
T Consensus       267 ~~~~li~~~l~~dP~~Rpt~~e~l~hp~  294 (336)
T cd07849         267 KALDLLDKMLTFNPHKRITVEEALAHPY  294 (336)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCcc
Confidence            8999999999999999999999999843

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.94  E-value=1.6e-27  Score=223.12  Aligned_cols=167  Identities=13%  Similarity=0.097  Sum_probs=115.6

Q ss_pred             ccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-------------------C
Q psy2787           3 ANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-------------------S   55 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-------------------~   55 (251)
                      +|++ .++|.+.+..+        +..++.|+++||+|||++||+||||||+|  ||++.                   +
T Consensus        59 ~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~N--iLl~~~~~~k~~d~~~~~~~~~~~~  135 (793)
T PLN00181         59 LECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSC--FVMSSFNHVSFIESASCSDSGSDED  135 (793)
T ss_pred             hccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchh--EEEcccCcEEEeeccccCccccccc
Confidence            4554 33566555332        23467799999999999999999999999  88844                   4


Q ss_pred             CceEEccCCCCcccCCCc---------------eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCC
Q psy2787          56 SSSSSGDFGMMRYSQNDC---------------YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP  120 (251)
Q Consensus        56 ~~~kl~DFGla~~~~~~~---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~p  120 (251)
                      +.+|++|||+++......               ........+|+.|||||++.+..++.++|||||||++|||++ |..|
T Consensus       136 ~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~-~~~~  214 (793)
T PLN00181        136 ATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFC-PVSS  214 (793)
T ss_pred             CcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhh-CCCc
Confidence            456777777776421100               000112357888999999999899999999999999999999 9888


Q ss_pred             CCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       121 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +....  .....+... ..++...........++.+||..+|.+||++.++++|.+
T Consensus       215 ~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~  267 (793)
T PLN00181        215 REEKS--RTMSSLRHR-VLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEF  267 (793)
T ss_pred             hhhHH--HHHHHHHHh-hcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchh
Confidence            75432  112222111 111111122446678999999999999999999998755

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.94  E-value=2e-27  Score=194.54  Aligned_cols=168  Identities=20%  Similarity=0.305  Sum_probs=131.8

Q ss_pred             cccccchhHHHHHhcC---C--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTE---P--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~---~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .+||++.++|...+..   .        ....+.|++.||.|||+.+++|+||+|+|  |+++. +.+||+|||++....
T Consensus        80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~n--ili~~-~~~~l~d~g~~~~~~  156 (260)
T cd08222          80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKN--IFLKN-NLLKIGDFGVSRLLM  156 (260)
T ss_pred             EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhh--eEeec-CCEeecccCceeecC
Confidence            5688887777764431   1        12345678899999999999999999999  87764 669999999988754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .... ......++..|+|||.+.+..++.++|+||||+++|++++ |..||.+.........+. .+..+..+..++.++
T Consensus       157 ~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  233 (260)
T cd08222         157 GSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCC-LAHAFEGQNFLSVVLRIV-EGPTPSLPETYSRQL  233 (260)
T ss_pred             CCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCCccHHHHHHHHH-cCCCCCCcchhcHHH
Confidence            3321 2233456778999999988888899999999999999999 999998766655555543 344444556788999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      .+++.+||..+|++||++.+++++-
T Consensus       234 ~~li~~~l~~~p~~Rp~~~~il~~~  258 (260)
T cd08222         234 NSIMQSMLNKDPSLRPSAAEILRNP  258 (260)
T ss_pred             HHHHHHHhcCChhhCcCHHHHhhCC
Confidence            9999999999999999999999863

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.94  E-value=4.6e-27  Score=195.91  Aligned_cols=171  Identities=16%  Similarity=0.177  Sum_probs=124.8

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-CCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-SSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~~~~   70 (251)
                      +.+||++. ++.+.....         ...++.|++.||+|||+++|+||||+|+|  |+++. ++.+||+|||++....
T Consensus        78 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~n--ill~~~~~~~kl~dfg~~~~~~  154 (294)
T PLN00009         78 LVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQN--LLIDRRTNALKLADFGLARAFG  154 (294)
T ss_pred             EEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcce--EEEECCCCEEEEcccccccccC
Confidence            35788864 555544321         11345688999999999999999999999  88885 4579999999997643


Q ss_pred             CCceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-CC----------
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GE----------  138 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~~----------  138 (251)
                      ... .......++..|+|||++.+. .++.++||||+|+++|+|++ |..||.+.+..+....+... +.          
T Consensus       155 ~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (294)
T PLN00009        155 IPV-RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVN-QKPLFPGDSEIDELFKIFRILGTPNEETWPGVT  232 (294)
T ss_pred             CCc-cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhccccc
Confidence            321 112234567789999988664 47889999999999999999 99999876654443332211 00          


Q ss_pred             ------------CCC----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         139 ------------RLP----RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       139 ------------~~~----~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                  ...    ..+..+.++.+++.+|++.+|++||++.+++++-+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~  286 (294)
T PLN00009        233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEY  286 (294)
T ss_pred             cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCch
Confidence                        000    01346788999999999999999999999998643

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.94  E-value=3.1e-27  Score=196.60  Aligned_cols=171  Identities=15%  Similarity=0.192  Sum_probs=130.5

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+++....       ...+.|++.||+|||+.+++||||+|+|  |+++.++.+||+|||+++......
T Consensus        82 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~n--il~~~~~~~kl~dfg~~~~~~~~~  159 (290)
T cd05613          82 LILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLEN--ILLDSNGHVVLTDFGLSKEFHEDE  159 (290)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH--eEECCCCCEEEeeCccceeccccc
Confidence            3678999998888764321       1234478899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCCh----hHHHHHHHhcCCCCCCCCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN--QFSQASDAWMFGVTIWEMFTFGAEPWVGLNG----MQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~S~G~il~el~~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ........++..|+|||.+.+.  .++.++||||||+++|+|++ |..||.....    ..+...+..  ...+.+..++
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~-g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  236 (290)
T cd05613         160 VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLT-GASPFTVDGEKNSQAEISRRILK--SEPPYPQEMS  236 (290)
T ss_pred             ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhc-CCCCCCcCCccccHHHHHHHhhc--cCCCCCccCC
Confidence            2223345577889999998753  36788999999999999999 9999964322    233333322  2334456788


Q ss_pred             HHHHHHHHHHhccCCCCCC-----CHHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERP-----KFSTLKDCLY  176 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rp-----s~~~il~~l~  176 (251)
                      ..+.+++.+||+.+|++||     ++.+++.+-+
T Consensus       237 ~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~  270 (290)
T cd05613         237 ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPF  270 (290)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcc
Confidence            9999999999999999997     6777777643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.94  E-value=4.5e-27  Score=195.59  Aligned_cols=170  Identities=17%  Similarity=0.193  Sum_probs=121.9

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||+. ++|.+.+...        ....+.|++.||.|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        80 lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~n--il~~~~~~~kl~dfg~~~~~~~~  156 (291)
T cd07844          80 LVFEYLD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQN--LLISERGELKLADFGLARAKSVP  156 (291)
T ss_pred             EEEecCC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHH--EEEcCCCCEEECccccccccCCC
Confidence            3578887 3666654322        22345688899999999999999999999  99999999999999998764322


Q ss_pred             ceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-hhHHHHHHHhcCC------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLN-GMQILQKIDREGE------------  138 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~-~~~~~~~i~~~~~------------  138 (251)
                      .. ......++..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+.. ..+....+...-.            
T Consensus       157 ~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (291)
T cd07844         157 SK-TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMAT-GRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSS  234 (291)
T ss_pred             Cc-cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHh-CCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhh
Confidence            11 1122345778999999875 457889999999999999999 999997654 2222221111000            


Q ss_pred             -------CC----CC-----CCCCc--HHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         139 -------RL----PR-----PEACP--VEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       139 -------~~----~~-----~~~~~--~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                             ..    +.     ....+  .++.+++.+||..+|++|||+.+++.+.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~  289 (291)
T cd07844         235 NPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHP  289 (291)
T ss_pred             ccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCC
Confidence                   00    00     01233  6788999999999999999999998753

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=4.8e-27  Score=194.53  Aligned_cols=169  Identities=15%  Similarity=0.148  Sum_probs=126.0

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +++||+ .+++.+.+....         ..++.|++.||.|||+++|+|+||+|+|  |+++.++.++|+|||++.....
T Consensus        75 lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~n--i~i~~~~~~~l~d~~~~~~~~~  151 (283)
T cd07830          75 FVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPEN--LLVSGPEVVKIADFGLAREIRS  151 (283)
T ss_pred             EEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhh--EEEcCCCCEEEeecccceeccC
Confidence            357788 667776554332         2345678899999999999999999999  9999999999999999986543


Q ss_pred             CceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC----------
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL----------  140 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~----------  140 (251)
                      ..  ......++..|+|||++.. ..++.++|+||||+++|++++ |..||.+....+....+......+          
T Consensus       152 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (283)
T cd07830         152 RP--PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYT-LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK  228 (283)
T ss_pred             CC--CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHh-CCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence            22  1223456778999998754 457889999999999999999 999998765544333222110000          


Q ss_pred             -------C-----------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         141 -------P-----------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       141 -------~-----------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                             .           ..+..+..+.+++.+||..+|++|||+.+++.+.
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~  281 (283)
T cd07830         229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHP  281 (283)
T ss_pred             hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCC
Confidence                   0           0112357899999999999999999999998763

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.94  E-value=4.4e-27  Score=199.70  Aligned_cols=172  Identities=17%  Similarity=0.134  Sum_probs=129.2

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc-
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC-   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~-   73 (251)
                      .+||++ ++|.+.+...       ...++.|++.||+|||+.+|+|+||+|+|  |+++.++.+||+|||++.....+. 
T Consensus        98 v~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~n--ill~~~~~~kl~dfg~~~~~~~~~~  174 (335)
T PTZ00024         98 VMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPAN--IFINSKGICKIADFGLARRYGYPPY  174 (335)
T ss_pred             EEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHH--eEECCCCCEEECCccceeecccccc
Confidence            467776 5677655432       22356788899999999999999999999  999999999999999997654111 


Q ss_pred             ------------eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC
Q psy2787          74 ------------YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL  140 (251)
Q Consensus        74 ------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~  140 (251)
                                  ........++..|+|||++.+. .++.++|+||+||++|+|++ |..||.+.+..+....+......+
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~t-g~~p~~~~~~~~~~~~i~~~~~~~  253 (335)
T PTZ00024        175 SDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT-GKPLFPGENEIDQLGRIFELLGTP  253 (335)
T ss_pred             cccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCC
Confidence                        0111223457789999998764 46889999999999999999 999998877655544432211000


Q ss_pred             C--------------------------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         141 P--------------------------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       141 ~--------------------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .                          .....+.++.+++.+||+.+|++||++.+++.+.+-
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~  316 (335)
T PTZ00024        254 NEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYF  316 (335)
T ss_pred             chhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCccc
Confidence            0                          012457789999999999999999999999987665

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.94  E-value=3.1e-27  Score=198.02  Aligned_cols=152  Identities=18%  Similarity=0.158  Sum_probs=114.9

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee---ecCCCCcCcccCCCcccCCC-C
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV---MTERKPLPCPWCPMESLKHN-Q   96 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~-~   96 (251)
                      .++.|++.||+|||+++|+|+||||+|  |+++.++.+||+|||++.........   ......++..|+|||++.+. .
T Consensus       123 ~i~~qi~~al~~lH~~~i~H~dl~p~n--il~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  200 (310)
T cd07865         123 KVMKMLLNGLYYIHRNKILHRDMKAAN--ILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERD  200 (310)
T ss_pred             HHHHHHHHHHHHHHHCCeeccCCCHHH--EEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcc
Confidence            456788999999999999999999999  99999999999999999864332211   11234567789999988764 3


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-----------------CC-------------CCCC
Q psy2787          97 FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-----------------PR-------------PEAC  146 (251)
Q Consensus        97 ~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-----------------~~-------------~~~~  146 (251)
                      ++.++||||||+++|+|++ |..||.+.+.......+..-....                 ..             +...
T Consensus       201 ~~~~~Di~slG~~l~el~t-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  279 (310)
T cd07865         201 YGPPIDMWGAGCIMAEMWT-RSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVK  279 (310)
T ss_pred             cCchhhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccC
Confidence            6889999999999999999 999998766543333222110000                 00             0113


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +..+.+++.+||..||++|||++++++|-
T Consensus       280 ~~~~~dli~~~l~~~P~~R~t~~e~l~h~  308 (310)
T cd07865         280 DPHALDLIDKLLVLDPAKRIDADTALNHD  308 (310)
T ss_pred             CHHHHHHHHHHhcCChhhccCHHHHhcCC
Confidence            45678999999999999999999999764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.94  E-value=3.1e-27  Score=201.34  Aligned_cols=172  Identities=17%  Similarity=0.215  Sum_probs=124.9

Q ss_pred             cccccchhHHHHHhcC------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-CCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTE------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-SSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+. ++|.+.+.+      ....++.|++.||+|||+.||+||||||+|  |+++. ++.+|++|||++........
T Consensus        94 v~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~N--ili~~~~~~~kl~dfg~~~~~~~~~~  170 (342)
T cd07854          94 VQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN--VFINTEDLVLKIGDFGLARIVDPHYS  170 (342)
T ss_pred             Eeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH--EEEcCCCceEEECCcccceecCCccc
Confidence            567776 466655432      223456788999999999999999999999  88874 55789999999976432211


Q ss_pred             e--ecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc---------------
Q psy2787          75 V--MTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE---------------  136 (251)
Q Consensus        75 ~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~---------------  136 (251)
                      .  ......++..|+|||++.+ ..++.++|||||||++|+|++ |..||.+....+....+...               
T Consensus       171 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (342)
T cd07854         171 HKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT-GKPLFAGAHELEQMQLILESVPVVREEDRNELLNV  249 (342)
T ss_pred             cccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhh
Confidence            1  1122346778999998654 457889999999999999999 99999876544333322111               


Q ss_pred             --------CCCCC-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         137 --------GERLP-----RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       137 --------~~~~~-----~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                              .....     .....+.++.+++.+||..||++|||+.+++.|-+-
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~  303 (342)
T cd07854         250 IPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM  303 (342)
T ss_pred             hhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcc
Confidence                    00000     113467889999999999999999999999987544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.94  E-value=3.1e-27  Score=195.72  Aligned_cols=168  Identities=15%  Similarity=0.125  Sum_probs=125.9

Q ss_pred             cccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           2 SANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      .+||++ +++.+.+....          ..++.|++.||+|||+.+|+||||||+|  |++++++.+||+|||++.....
T Consensus        76 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~n--i~~~~~~~~~l~d~g~~~~~~~  152 (284)
T cd07836          76 VFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQN--LLINKRGELKLADFGLARAFGI  152 (284)
T ss_pred             EEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH--EEECCCCcEEEeecchhhhhcC
Confidence            567887 36666543221          2356778899999999999999999999  9999999999999999976433


Q ss_pred             CceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-----------
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-----------  139 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-----------  139 (251)
                      ... ......++..|++||++.+. .++.++|+||+|+++|++++ |..||.+.+..+....+......           
T Consensus       153 ~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (284)
T cd07836         153 PVN-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMIT-GRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ  230 (284)
T ss_pred             Ccc-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhc
Confidence            211 12234567789999988654 46889999999999999999 99999887655544433221000           


Q ss_pred             -----CC-----------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         140 -----LP-----------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       140 -----~~-----------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                           ..           ..+.++..+.+++.+||+.||.+||++.+++++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~  281 (284)
T cd07836         231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH  281 (284)
T ss_pred             CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence                 00           012457788999999999999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=5.6e-27  Score=199.75  Aligned_cols=147  Identities=15%  Similarity=0.184  Sum_probs=115.8

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC-CCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~   99 (251)
                      ..+.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+++.....    .....++..|+|||++.+ ..++.
T Consensus       121 ~~~~qi~~aL~~LH~~~i~H~dlkp~N--Ill~~~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~  194 (342)
T cd07879         121 YLVYQMLCGLKYIHSAGIIHRDLKPGN--LAVNEDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILNWMHYNQ  194 (342)
T ss_pred             HHHHHHHHHHHHHHHCCcccCCCCHHH--EEECCCCCEEEeeCCCCcCCCCC----CCCceeeecccChhhhcCccccCc
Confidence            356678899999999999999999999  99999999999999998764322    123355778999999876 45789


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-----------------------CCCC------CCCCcHHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-----------------------RLPR------PEACPVEV  150 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-----------------------~~~~------~~~~~~~~  150 (251)
                      ++|||||||++|||++ |+.||.+.+.......+.....                       ..+.      .+..+..+
T Consensus       195 ~~Dv~slGvil~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (342)
T cd07879         195 TVDIWSVGCIMAEMLT-GKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQA  273 (342)
T ss_pred             hHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHH
Confidence            9999999999999999 9999988765443333222100                       0000      12466789


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      .+++.+||+.||++||++.+++.|
T Consensus       274 ~~li~~~l~~dP~~R~~~~e~l~h  297 (342)
T cd07879         274 VDLLEKMLELDVDKRLTATEALEH  297 (342)
T ss_pred             HHHHHHHcCCChhhCcCHHHHhcC
Confidence            999999999999999999999987

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.94  E-value=1e-26  Score=197.30  Aligned_cols=153  Identities=13%  Similarity=0.135  Sum_probs=117.5

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee---ecCCCCcCcccCCCcccCC-CC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV---MTERKPLPCPWCPMESLKH-NQ   96 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~   96 (251)
                      .++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++........   ......++..|+|||++.+ ..
T Consensus       109 ~~~~qi~~aL~~LH~~givH~dlkp~N--ili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~  186 (332)
T cd07857         109 SFIYQILCGLKYIHSANVLHRDLKPGN--LLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQS  186 (332)
T ss_pred             HHHHHHHHHHHHHHhCCcccCCCCHHH--eEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCC
Confidence            456788899999999999999999999  99999999999999999864332111   1223467888999998765 45


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-------------------------C-CCC---CCCCCCc
Q psy2787          97 FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-------------------------G-ERL---PRPEACP  147 (251)
Q Consensus        97 ~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-------------------------~-~~~---~~~~~~~  147 (251)
                      ++.++||||+|+++|++++ |..||.+.+.......+...                         . ...   ...+..+
T Consensus       187 ~~~~~Di~slGv~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (332)
T cd07857         187 YTKAIDVWSVGCILAELLG-RKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNAN  265 (332)
T ss_pred             CCcHHHHHHHHHHHHHHHh-CCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCC
Confidence            7899999999999999999 99999876543333222110                         0 000   0113457


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ..+.+++.+||+.+|++|||+.+++.+-+
T Consensus       266 ~~~~~li~~~l~~~P~~R~t~~~ll~~~~  294 (332)
T cd07857         266 PLALDLLEKLLAFDPTKRISVEEALEHPY  294 (332)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHhcChh
Confidence            88999999999999999999999988754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.94  E-value=9.1e-27  Score=192.56  Aligned_cols=169  Identities=18%  Similarity=0.155  Sum_probs=126.4

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+. ++|.+.+...        ....+.+++.||+|||+++|+||||+|+|  |+++.++.+||+|||+++......
T Consensus        76 v~e~~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~n--i~~~~~~~~~l~d~g~~~~~~~~~  152 (282)
T cd07829          76 VFEYCD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQN--ILINRDGVLKLADFGLARAFGIPL  152 (282)
T ss_pred             EecCcC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhe--EEEcCCCCEEEecCCcccccCCCc
Confidence            467776 3666655432        13356677899999999999999999999  999999999999999998754332


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC--------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE--------------  138 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~--------------  138 (251)
                      . .......+..|+|||.+.+. .++.++||||||+++||+++ |..||.+....+....+.....              
T Consensus       153 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (282)
T cd07829         153 R-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMIT-GKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLP  230 (282)
T ss_pred             c-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHh-CCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccc
Confidence            1 12233446679999998766 78899999999999999999 9999987665444433321100              


Q ss_pred             ----CC---------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         139 ----RL---------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       139 ----~~---------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                          ..         ...+..+..+.+++.+||..+|++||++.+++.+-
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p  280 (282)
T cd07829         231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHP  280 (282)
T ss_pred             cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCc
Confidence                00         00123467899999999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.94  E-value=1.3e-26  Score=194.39  Aligned_cols=152  Identities=20%  Similarity=0.157  Sum_probs=116.1

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee----------ecCCCCcCcccCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV----------MTERKPLPCPWCPME   90 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~~~~y~aPE   90 (251)
                      .++.|+++||+|||++||+|+||||+|  |+++.++.+||+|||+++........          ......++..|+|||
T Consensus       119 ~i~~~l~~al~~lH~~~i~H~dl~p~n--il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  196 (311)
T cd07866         119 CYMLQLLEGINYLHENHILHRDIKAAN--ILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPE  196 (311)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHH--EEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChH
Confidence            456788899999999999999999999  99999999999999999864322111          112234577899999


Q ss_pred             ccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC---------------------CCC-----
Q psy2787          91 SLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL---------------------PRP-----  143 (251)
Q Consensus        91 ~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~---------------------~~~-----  143 (251)
                      ++.+. .++.++||||||+++|||++ |..||.+.+.......+......+                     ..+     
T Consensus       197 ~~~~~~~~~~~~Dv~slG~il~el~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  275 (311)
T cd07866         197 LLLGERRYTTAVDIWGIGCVFAEMFT-RRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEE  275 (311)
T ss_pred             HhhCCCccCchhHhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHH
Confidence            87654 47889999999999999999 999998876655444432211000                     000     


Q ss_pred             --CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         144 --EACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       144 --~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                        ....+.+.+++.+||..+|++|||+.+++.+-
T Consensus       276 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~  309 (311)
T cd07866         276 RFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHP  309 (311)
T ss_pred             HcccCChhHHHHHHHHcccCcccCcCHHHHhcCC
Confidence              22446788999999999999999999998764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>KOG2052|consensus

Probab=99.94  E-value=3.8e-27  Score=196.54  Aligned_cols=178  Identities=18%  Similarity=0.286  Sum_probs=138.2

Q ss_pred             CcccccchhHHHHHhcCCC------CCCCchhhHHhhhhhhC--------CcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEPC------RKPLPPERRGYGTFSVN--------NICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~------~~~~~~~~~gl~~lH~~--------~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      ++++|.++|+|.+++...-      -++..-++.||+|||..        .|.|||||+.|  ||+.+++.+.|+|+|||
T Consensus       286 LvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKN--ILVKkn~~C~IADLGLA  363 (513)
T KOG2052|consen  286 LVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKN--ILVKKNGTCCIADLGLA  363 (513)
T ss_pred             EeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccccc--EEEccCCcEEEeeceee
Confidence            4689999999999887532      33445556899999975        59999999999  99999999999999999


Q ss_pred             cccCCC---ceeecCCCCcCcccCCCcccCCC----CCC--chhHHHHHHHHHHHHHh---------CCCCCCCC-----
Q psy2787          67 RYSQND---CYVMTERKPLPCPWCPMESLKHN----QFS--QASDAWMFGVTIWEMFT---------FGAEPWVG-----  123 (251)
Q Consensus        67 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~----~~~--~~~Di~S~G~il~el~~---------~g~~pf~~-----  123 (251)
                      ......   -....+...||.+|||||++...    .|.  +.+||||||.|+||+..         ..++||.+     
T Consensus       364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D  443 (513)
T KOG2052|consen  364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD  443 (513)
T ss_pred             EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC
Confidence            874433   23355678999999999998753    232  57999999999999875         13468854     


Q ss_pred             CChhHHHHHHHhcCCCCCCCCCC-----cHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         124 LNGMQILQKIDREGERLPRPEAC-----PVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       124 ~~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .+.+++..-++..+.++.+|..+     -..+.++|+.||..+|..|.|+-.+.+.|.++.+
T Consensus       444 Ps~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  444 PSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             CCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            33455666666677777666432     2356789999999999999999999998887764

>KOG1006|consensus

Probab=99.93  E-value=3e-27  Score=185.83  Aligned_cols=148  Identities=18%  Similarity=0.277  Sum_probs=115.3

Q ss_pred             CCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC--CCCC
Q psy2787          22 PLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH--NQFS   98 (251)
Q Consensus        22 ~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~   98 (251)
                      ..-.+..||.||-. .+|||||+||+|  ||++..|.+||||||.+-.+.++-  ..+...|-..|||||.+..  ..|+
T Consensus       172 ItvatV~AL~yLK~~lkiIHRDvKPSN--ILldr~G~vKLCDFGIcGqLv~Si--AkT~daGCrpYmAPERi~p~~~gyD  247 (361)
T KOG1006|consen  172 ITVATVDALDYLKEELKIIHRDVKPSN--ILLDRHGDVKLCDFGICGQLVDSI--AKTVDAGCRPYMAPERIDPSDKGYD  247 (361)
T ss_pred             eeeeehhHHHHHHHHhhhhhccCChhh--eEEecCCCEeeecccchHhHHHHH--HhhhccCCccccChhccCCccCCcc
Confidence            33444689999965 589999999999  999999999999999998765542  2334456667999998874  3488


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCC--CCC---CCCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERL--PRP---EACPVEVYALMRQCWSKNPAERPKFSTLK  172 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~--~~~---~~~~~~~~~li~~cl~~dP~~Rps~~~il  172 (251)
                      .+|||||+|+++||+.| |..||.+.+. .+.+..+. .+..+  ..+   -+.+..+..++..|+.+|-+.||++.+++
T Consensus       248 iRSDvWSLGITL~EvAt-G~fPyr~w~svfeql~~Vv-~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk  325 (361)
T KOG1006|consen  248 IRSDVWSLGITLYEVAT-GNFPYRKWDSVFEQLCQVV-IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLK  325 (361)
T ss_pred             hhhhhhhhcceEeeeec-CCCCcchHHHHHHHHHHHH-cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhh
Confidence            99999999999999999 9999988754 23333332 23232  222   33788999999999999999999999988


Q ss_pred             HHH
Q psy2787         173 DCL  175 (251)
Q Consensus       173 ~~l  175 (251)
                      ++-
T Consensus       326 ~~~  328 (361)
T KOG1006|consen  326 KFP  328 (361)
T ss_pred             cCc
Confidence            753

>KOG1027|consensus

Probab=99.93  E-value=1.3e-27  Score=212.03  Aligned_cols=150  Identities=18%  Similarity=0.251  Sum_probs=117.7

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEE---ccCCceEEccCCCCcccCCCc--eeecCCCCcCcccCCCcccCCCC
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILF---FSSSSSSSGDFGMMRYSQNDC--YVMTERKPLPCPWCPMESLKHNQ   96 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~---~~~~~~kl~DFGla~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~   96 (251)
                      .+.|+.+||++||+.+||||||||.||+|..   +....++|+|||+++.+..+.  ........||-+|+|||++....
T Consensus       611 ~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~  690 (903)
T KOG1027|consen  611 VLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR  690 (903)
T ss_pred             HHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccc
Confidence            4677889999999999999999999944444   234579999999999855433  33456788999999999999988


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC---CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy2787          97 FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL---PRPEACPVEVYALMRQCWSKNPAERPKFSTLKD  173 (251)
Q Consensus        97 ~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~  173 (251)
                      -++++||||+||++|+.+++|..||.+.-..+  ..|.......   ....++  ++.+||.+|+..+|..||++.+|+.
T Consensus       691 ~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~~L~~L~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  691 KTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNYTLVHLEPLPDC--EAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             cCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCccceeeeccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence            88899999999999999997899997643222  2333333222   111223  8899999999999999999999998


Q ss_pred             HH
Q psy2787         174 CL  175 (251)
Q Consensus       174 ~l  175 (251)
                      |.
T Consensus       767 HP  768 (903)
T KOG1027|consen  767 HP  768 (903)
T ss_pred             CC
Confidence            74

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.93  E-value=4.2e-26  Score=183.62  Aligned_cols=167  Identities=18%  Similarity=0.242  Sum_probs=131.3

Q ss_pred             cccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||.+.++|.+......       ...+.+++.|+.+||+.+|+|+||+|.|  |+++.++.++++|||.+....... 
T Consensus        65 ~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~n--i~~~~~~~~~l~d~~~~~~~~~~~-  141 (244)
T smart00220       65 VMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPEN--ILLDEDGHVKLADFGLARQLDPGG-  141 (244)
T ss_pred             EEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHH--eEECCCCcEEEccccceeeecccc-
Confidence            467777777777654322       2456677899999999999999999999  999999999999999998754432 


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-CChhHHHHHHHhcCCCCCCCCC--CcHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVG-LNGMQILQKIDREGERLPRPEA--CPVEVY  151 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~--~~~~~~  151 (251)
                       ......++..|++||.+.+..++.++||||+|+++|++++ |..||.. .........+ ...........  ++.++.
T Consensus       142 -~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~-~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  218 (244)
T smart00220      142 -LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLT-GKPPFPGDDQLLELFKKI-GKPKPPFPPPEWKISPEAK  218 (244)
T ss_pred             -ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH-hccCCCCccccccCCHHHH
Confidence             2334556778999999988888999999999999999999 9999987 4444444444 23333222222  888999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      +++.+||..+|++||++.+++++
T Consensus       219 ~~i~~~l~~~p~~Rp~~~~~~~~  241 (244)
T smart00220      219 DLIRKLLVKDPEKRLTAEEALQH  241 (244)
T ss_pred             HHHHHHccCCchhccCHHHHhhC
Confidence            99999999999999999999874

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.93  E-value=2.9e-26  Score=195.46  Aligned_cols=149  Identities=16%  Similarity=0.164  Sum_probs=118.0

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC-CCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~   99 (251)
                      ..+.|+++||+|||+.||+||||||+|  |+++.++.+||+|||++......    .....++..|+|||.+.+ ..++.
T Consensus       122 ~~~~ql~~aL~~LH~~gi~H~dlkp~N--ill~~~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~  195 (343)
T cd07851         122 FLVYQILRGLKYIHSAGIIHRDLKPSN--IAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQ  195 (343)
T ss_pred             HHHHHHHHHHHHHHHCCeecCCCCHHH--eEECCCCCEEEcccccccccccc----ccCCcccccccCHHHHhCCCCCCc
Confidence            356688899999999999999999999  99999999999999999865432    223356778999998865 35788


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC-----------------------------CCCCCcHHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP-----------------------------RPEACPVEV  150 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~-----------------------------~~~~~~~~~  150 (251)
                      ++||||+|+++|++++ |+.||.+....+....+......++                             .....+.++
T Consensus       196 ~~DvwslGv~l~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l  274 (343)
T cd07851         196 TVDIWSVGCIMAELLT-GKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLA  274 (343)
T ss_pred             hHhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHH
Confidence            9999999999999999 9999987766554444322111000                             012357889


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+++.+||..+|++|||+.+++.|-+
T Consensus       275 ~dli~~~l~~~P~~Rpt~~ell~h~~  300 (343)
T cd07851         275 IDLLEKMLVLDPDKRITAAEALAHPY  300 (343)
T ss_pred             HHHHHHhCCCChhhCCCHHHHhcCCC
Confidence            99999999999999999999998744

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.93  E-value=5e-26  Score=192.86  Aligned_cols=168  Identities=15%  Similarity=0.169  Sum_probs=123.3

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||+. ++|.....+.      ...++.|+++||+|||+++|+||||+|+|  |+++.++.+||+|||++......   
T Consensus        88 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~N--ili~~~~~~~l~dfg~~~~~~~~---  161 (328)
T cd07856          88 VTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSN--ILINENCDLKICDFGLARIQDPQ---  161 (328)
T ss_pred             Eeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH--EeECCCCCEEeCccccccccCCC---
Confidence            456664 3555544321      12346788899999999999999999999  99999999999999998754322   


Q ss_pred             ecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh-------------------
Q psy2787          76 MTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR-------------------  135 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~-------------------  135 (251)
                       .....++..|+|||++.+ ..++.++|+||+|+++|++++ |..||.+.........+..                   
T Consensus       162 -~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~t-g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (328)
T cd07856         162 -MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLE-GKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL  239 (328)
T ss_pred             -cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhH
Confidence             123345777999998765 568899999999999999999 9999987654322211110                   


Q ss_pred             -----c--CCCCCC---CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         136 -----E--GERLPR---PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       136 -----~--~~~~~~---~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                           .  ....+.   .+.++.++.+++.+||+.+|++||++.+++.+-+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~  291 (328)
T cd07856         240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL  291 (328)
T ss_pred             HHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcc
Confidence                 0  000111   13467899999999999999999999999887543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG0664|consensus

Probab=99.93  E-value=4.1e-27  Score=185.99  Aligned_cols=156  Identities=19%  Similarity=0.213  Sum_probs=122.9

Q ss_pred             CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-C
Q psy2787          18 PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-Q   96 (251)
Q Consensus        18 ~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~   96 (251)
                      ..+.|+.||++||.|||+.+|.||||||.|  .|+++|-.+||||||+++..+.+.....+....|..|.|||.+.+. .
T Consensus       157 HvKVFlYQILRGLKYLHsA~ILHRDIKPGN--LLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRh  234 (449)
T KOG0664|consen  157 HVKVFVYQILRGLKYLHTANILHRDIKPGN--LLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARR  234 (449)
T ss_pred             hhhhhHHHHHhhhHHHhhcchhhccCCCcc--EEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchh
Confidence            456789999999999999999999999999  9999999999999999998665544444455667789999999875 5


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh-----------------------cCCCCCC---------CC
Q psy2787          97 FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR-----------------------EGERLPR---------PE  144 (251)
Q Consensus        97 ~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~-----------------------~~~~~~~---------~~  144 (251)
                      |+.+.||||.|||+.|++- .+.-|...++.+.++.|..                       .+.+.+.         +.
T Consensus       235 Ys~AvDiWSVGCIFaELLg-RrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~  313 (449)
T KOG0664|consen  235 YTGAVDIWSVGCIFAELLQ-RKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPD  313 (449)
T ss_pred             hcCccceehhhHHHHHHHh-hhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCc
Confidence            8999999999999999998 7777876665554444422                       1111111         12


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .-..+...++.+++..||++|.+..+.+.++.
T Consensus       314 ~~~heav~~~~~~l~~d~dkris~~~A~~~~~  345 (449)
T KOG0664|consen  314 DKNHEAVDLLQKLLHFDPDKRISVEEALQHRY  345 (449)
T ss_pred             ccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence            33346778889999999999999999888764

>KOG4250|consensus

Probab=99.93  E-value=2.3e-26  Score=201.34  Aligned_cols=173  Identities=17%  Similarity=0.272  Sum_probs=128.9

Q ss_pred             CcccccchhHHHHHhcCCCCC----------CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC--ceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPCRK----------PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS--SSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~----------~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~--~~kl~DFGla~~   68 (251)
                      ++||||..|+|...+.++-..          .+..++.||.|||++||+||||||.||+++.+.+|  ..||+|||+|+.
T Consensus        94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are  173 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE  173 (732)
T ss_pred             EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence            479999999999998876432          24556699999999999999999999777777766  579999999998


Q ss_pred             cCCCceeecCCCCcCcccCCCcccC-CCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----ChhHHHHHHHhcC------
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLK-HNQFSQASDAWMFGVTIWEMFTFGAEPWVGL----NGMQILQKIDREG------  137 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~-~~~~~~~~Di~S~G~il~el~~~g~~pf~~~----~~~~~~~~i~~~~------  137 (251)
                      .+++.  ...+..||..|.+||++. ...|+..+|.|||||++|+.+| |..||-..    +..++...+...+      
T Consensus       174 l~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caT-G~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i  250 (732)
T KOG4250|consen  174 LDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECAT-GELPFIPFGGPKNNKEIMWHIITKKPSGVAI  250 (732)
T ss_pred             CCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhc-cCCCCCcCCCccccchhhhhhhccCCCceeE
Confidence            76654  667789999999999999 4788999999999999999999 99999432    2233333332211      


Q ss_pred             -------------CCCCCCCCCcH----HHHHHHHHHhccCCCCCC--CHHHHHHHHH
Q psy2787         138 -------------ERLPRPEACPV----EVYALMRQCWSKNPAERP--KFSTLKDCLY  176 (251)
Q Consensus       138 -------------~~~~~~~~~~~----~~~~li~~cl~~dP~~Rp--s~~~il~~l~  176 (251)
                                   ..+|.+.+.++    .+-..+..++..+|.+|-  .+.+....+.
T Consensus       251 ~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~  308 (732)
T KOG4250|consen  251 GAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVD  308 (732)
T ss_pred             eeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHH
Confidence                         11223333333    344577788889999997  5544444443

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.93  E-value=3.7e-26  Score=194.93  Aligned_cols=149  Identities=15%  Similarity=0.143  Sum_probs=117.0

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC-CCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~   99 (251)
                      .++.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+++.....    .....++..|+|||++.+ ..++.
T Consensus       124 ~i~~qi~~aL~~LH~~~ivH~dlkp~N--Ill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~  197 (345)
T cd07877         124 FLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQ  197 (345)
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCChHH--EEEcCCCCEEEeccccccccccc----ccccccCCCccCHHHHhCccCCCc
Confidence            356788899999999999999999999  99999999999999998864332    223456778999998866 46788


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC------------------------CCCC-----CCCCcHHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE------------------------RLPR-----PEACPVEV  150 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~------------------------~~~~-----~~~~~~~~  150 (251)
                      ++||||+||++|+|++ |..||.+.+.......+.....                        .+..     ....+.++
T Consensus       198 ~~DvwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (345)
T cd07877         198 TVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLA  276 (345)
T ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHH
Confidence            9999999999999999 9999987654443332211100                        0000     12357789


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+++.+|+..||.+||++.+++.|-+
T Consensus       277 ~~li~~~L~~dp~~R~t~~e~l~h~~  302 (345)
T cd07877         277 VDLLEKMLVLDSDKRITAAQALAHAY  302 (345)
T ss_pred             HHHHHHHcCCChhhcCCHHHHhcChh
Confidence            99999999999999999999999865

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.93  E-value=9.7e-26  Score=192.23  Aligned_cols=149  Identities=13%  Similarity=0.151  Sum_probs=117.2

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC-CCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFSQ   99 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~   99 (251)
                      .++.|++.||+|||+.||+||||||+|  |+++.++.+||+|||++......    .....++..|+|||++.+ ..++.
T Consensus       122 ~i~~qi~~al~~LH~~gi~H~dlkp~N--ill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~  195 (343)
T cd07880         122 FLVYQMLKGLKYIHAAGIIHRDLKPGN--LAVNEDCELKILDFGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQ  195 (343)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCCEEEeecccccccccC----ccccccCCcccCHHHHhCCCCCCc
Confidence            356788899999999999999999999  99999999999999999864332    223356778999999876 45789


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-----------------------------CCCCCCcHHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-----------------------------PRPEACPVEV  150 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-----------------------------~~~~~~~~~~  150 (251)
                      ++|+||+|+++|++++ |..||.+.+.......+.......                             .....++..+
T Consensus       196 ~~Di~slG~ll~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (343)
T cd07880         196 TVDIWSVGCIMAEMLT-GKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLA  274 (343)
T ss_pred             HHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHH
Confidence            9999999999999999 999998765443333322111100                             0113567789


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+++.+|+..||++|||+.+++.+-+
T Consensus       275 ~~li~~~l~~dP~~R~t~~~~l~~~~  300 (343)
T cd07880         275 VNVLEKMLVLDAESRITAAEALAHPY  300 (343)
T ss_pred             HHHHHHHcCCChhhCCCHHHHhcCcc
Confidence            99999999999999999999997644

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>KOG0665|consensus

Probab=99.93  E-value=3e-26  Score=184.20  Aligned_cols=154  Identities=17%  Similarity=0.168  Sum_probs=121.7

Q ss_pred             CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCC
Q psy2787          19 CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFS   98 (251)
Q Consensus        19 ~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~   98 (251)
                      ...++.|.+.|++|||+.||+||||||+|  |++..+..+||+|||+|+.....  ...+.-..|..|.|||++.+..+.
T Consensus       120 is~i~yq~~~~ik~lhs~~IihRdLkPsn--ivv~~~~~lKi~dfg~ar~e~~~--~~mtpyVvtRyyrapevil~~~~k  195 (369)
T KOG0665|consen  120 ISYILYQMLCGIKHLHSAGIIHRDLKPSN--IVVNSDCTLKILDFGLARTEDTD--FMMTPYVVTRYYRAPEVILGMGYK  195 (369)
T ss_pred             HHHHHHHHHHHHHHHHhcceeecccCccc--ceecchhheeeccchhhcccCcc--cccCchhheeeccCchheeccCCc
Confidence            45567888999999999999999999999  99999999999999999874433  233444567779999999998899


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-------------------------------CC-----
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-------------------------------PR-----  142 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-------------------------------~~-----  142 (251)
                      ..+||||.||++.||++ |..-|+|.+..+.+.++.+.-..+                               +.     
T Consensus       196 e~vdiwSvGci~gEli~-~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~  274 (369)
T KOG0665|consen  196 ENVDIWSVGCIMGELIL-GTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPV  274 (369)
T ss_pred             ccchhhhhhhHHHHHhh-ceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccc
Confidence            99999999999999999 999998876655444443211000                               00     


Q ss_pred             ----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         143 ----PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       143 ----~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                          +..-...+++++.+||..+|++|.|+++++.|..-
T Consensus       275 ~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~  313 (369)
T KOG0665|consen  275 VLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYI  313 (369)
T ss_pred             cccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCee
Confidence                01122357899999999999999999999998654

>KOG0607|consensus

Probab=99.93  E-value=1.9e-26  Score=185.60  Aligned_cols=174  Identities=14%  Similarity=0.202  Sum_probs=131.4

Q ss_pred             cccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC---ceEEccCCCCccc--
Q psy2787           2 SANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS---SSSSGDFGMMRYS--   69 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~---~~kl~DFGla~~~--   69 (251)
                      ..|-+..|.++..+..       .+...+..++.||.|||.+||.|||+||+|  ||-....   -+|||||.++...  
T Consensus       154 VfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPEN--iLC~~pn~vsPvKiCDfDLgSg~k~  231 (463)
T KOG0607|consen  154 VFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPEN--ILCESPNKVSPVKICDFDLGSGIKL  231 (463)
T ss_pred             EEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccc--eeecCCCCcCceeeecccccccccc
Confidence            4566677888876543       233456677899999999999999999999  7765544   5899999887642  


Q ss_pred             CCCc----eeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---------------
Q psy2787          70 QNDC----YVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN---------------  125 (251)
Q Consensus        70 ~~~~----~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~---------------  125 (251)
                      ..+-    +....+..|...|||||+..     ..-|++++|.||+|+|+|-|++ |.+||.|..               
T Consensus       232 ~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLs-GYpPFvG~Cg~dCGWdrGe~Cr~C  310 (463)
T KOG0607|consen  232 NNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLS-GYPPFVGHCGADCGWDRGEVCRVC  310 (463)
T ss_pred             CCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHh-CCCCccCccCCcCCccCCCccHHH
Confidence            1111    22334567888999999875     2347899999999999999999 999996532               


Q ss_pred             hhHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         126 GMQILQKIDREGERLPRP--EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       126 ~~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ...+++.|....+.+|..  .+++.+.++++..++..++.+|.++..++.|.+.-
T Consensus       311 Q~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~  365 (463)
T KOG0607|consen  311 QNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQ  365 (463)
T ss_pred             HHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccc
Confidence            234566675555555432  46899999999999999999999999999977643

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.92  E-value=1.7e-25  Score=205.52  Aligned_cols=96  Identities=22%  Similarity=0.282  Sum_probs=81.7

Q ss_pred             CcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC-CCCCCcHHHHHHHHHHhc
Q psy2787          81 PLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP-RPEACPVEVYALMRQCWS  159 (251)
Q Consensus        81 ~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~li~~cl~  159 (251)
                      .||+.|+|||++.+..++.++|||||||++|||++ |..||.+....++...+.......+ ....++..+.+++..||.
T Consensus       541 vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~Ellt-G~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~lL~  619 (669)
T cd05610         541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLT-GIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEILLT  619 (669)
T ss_pred             eeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcc
Confidence            35888999999999889999999999999999999 9999999888777777755433322 234678889999999999


Q ss_pred             cCCCCCCCHHHHHHHHHh
Q psy2787         160 KNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       160 ~dP~~Rps~~~il~~l~~  177 (251)
                      .||++||++.+++.|.+.
T Consensus       620 ~dP~~R~ta~e~l~h~~~  637 (669)
T cd05610         620 MDPTKRAGLKELKQHPLF  637 (669)
T ss_pred             cChhHCcCHHHHHhCHhh
Confidence            999999999999998764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0669|consensus

Probab=99.92  E-value=1.6e-25  Score=175.06  Aligned_cols=160  Identities=18%  Similarity=0.189  Sum_probs=122.3

Q ss_pred             CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce---eecCCCCcCcccCCCcccCCC-
Q psy2787          20 RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY---VMTERKPLPCPWCPMESLKHN-   95 (251)
Q Consensus        20 ~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~-   95 (251)
                      ++.+..+..||.|+|.+.|+|||+|++|  +|++.+|++||+|||+++.+.....   ...+.+..|.+|.+||.+.+. 
T Consensus       127 kk~Mk~Lm~GL~~iHr~kilHRDmKaaN--vLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r  204 (376)
T KOG0669|consen  127 KKVMKGLMNGLYYIHRNKILHRDMKAAN--VLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDR  204 (376)
T ss_pred             HHHHHHHHHHHHHHHHhhHHhhcccHhh--EEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhccc
Confidence            4456667789999999999999999999  9999999999999999986432211   122345668999999998864 


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh--cCCCC------------------CCC------------
Q psy2787          96 QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR--EGERL------------------PRP------------  143 (251)
Q Consensus        96 ~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~--~~~~~------------------~~~------------  143 (251)
                      .++.+.|||..|||+.||++ +.+-+.+.+..+.+..|..  .....                  |.+            
T Consensus       205 ~yg~~iDiWgAgCimaeMwt-rspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~k  283 (376)
T KOG0669|consen  205 EYGPPIDIWGAGCIMAEMWT-RSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLK  283 (376)
T ss_pred             ccCCcchhHhHHHHHHHHHc-cCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcc
Confidence            58999999999999999999 8888888776665554422  00000                  011            


Q ss_pred             -CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         144 -EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       144 -~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                       -.-.++..+|+.+++..||.+|+++++++.|-+....++
T Consensus       284 p~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~  323 (376)
T KOG0669|consen  284 PYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM  323 (376)
T ss_pred             cccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence             112236789999999999999999999999877655443

>KOG0666|consensus

Probab=99.92  E-value=1.6e-25  Score=179.67  Aligned_cols=157  Identities=17%  Similarity=0.197  Sum_probs=116.3

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC----CceEEccCCCCcccCCCcee--ecCCCCcCcccCCCcccCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS----SSSSSGDFGMMRYSQNDCYV--MTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~----~~~kl~DFGla~~~~~~~~~--~~~~~~~~~~y~aPE~~~~   94 (251)
                      .++.|++.|+.|||++.|+||||||.|  |++..+    |.+||+|||++|.+.++...  .......|.+|.|||.+.+
T Consensus       136 silwQil~Gv~YLH~NWvlHRDLKPaN--IlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLG  213 (438)
T KOG0666|consen  136 SILWQILDGVHYLHSNWVLHRDLKPAN--ILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLG  213 (438)
T ss_pred             HHHHHHHhhhHHHhhhheeeccCCcce--EEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcc
Confidence            457788999999999999999999999  777666    89999999999997665432  2345677999999999987


Q ss_pred             C-CCCchhHHHHHHHHHHHHHhCCCCCCCCCCh---------hHHHHHHHhc-CCC----CC----CC------------
Q psy2787          95 N-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNG---------MQILQKIDRE-GER----LP----RP------------  143 (251)
Q Consensus        95 ~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~---------~~~~~~i~~~-~~~----~~----~~------------  143 (251)
                      . .|+.+.|||+.|||+.||++ -++-|.+...         .+.+.+|..- +.+    .+    .|            
T Consensus       214 a~hYT~AiDvWAiGCIfaElLt-l~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~  292 (438)
T KOG0666|consen  214 ARHYTKAIDVWAIGCIFAELLT-LEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRH  292 (438)
T ss_pred             cccccchhhhHHHHHHHHHHHc-cCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHh
Confidence            5 58999999999999999999 6766654211         1112222110 000    00    00            


Q ss_pred             --------------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         144 --------------EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       144 --------------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                                    ..-++...+|+.++|..||-+|.|+++++++......
T Consensus       293 ~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  293 YYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             hcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence                          1123347899999999999999999999998765543

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.92  E-value=1.9e-25  Score=213.65  Aligned_cols=172  Identities=16%  Similarity=0.181  Sum_probs=125.7

Q ss_pred             CcccccchhHHHHHhcC----CCCCCCchhhHHhhhhh---hCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE----PCRKPLPPERRGYGTFS---VNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~----~~~~~~~~~~~gl~~lH---~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.++|.+.+..    ...+++.++++||+|||   +.+|+||||||+|  |+++.++..++. ||........ 
T Consensus       760 lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~N--il~~~~~~~~~~-~~~~~~~~~~-  835 (968)
T PLN00113        760 LIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEK--IIIDGKDEPHLR-LSLPGLLCTD-  835 (968)
T ss_pred             EEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHh--EEECCCCceEEE-eccccccccC-
Confidence            46899999999887653    22346778899999999   6699999999999  999988887775 6655432211 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh--hHHHHHHH--hcCC------CC---
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG--MQILQKID--REGE------RL---  140 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~--~~~~~~i~--~~~~------~~---  140 (251)
                          ....++..|+|||++.+..++.++|||||||++|||++ |+.||.....  ..+.....  ....      .+   
T Consensus       836 ----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  910 (968)
T PLN00113        836 ----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLT-GKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIR  910 (968)
T ss_pred             ----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHh-CCCCCCcccCCCCcHHHHHHHhcCccchhheeCcccc
Confidence                22356788999999999899999999999999999999 9999853211  11111110  0000      00   


Q ss_pred             ---CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         141 ---PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       141 ---~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                         +.+.....++.+++.+||+.+|++|||+.++++.|+.+...
T Consensus       911 ~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~  954 (968)
T PLN00113        911 GDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASRS  954 (968)
T ss_pred             CCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhcc
Confidence               01111233577899999999999999999999999877553

>KOG4236|consensus

Probab=99.92  E-value=1.6e-26  Score=196.60  Aligned_cols=151  Identities=16%  Similarity=0.197  Sum_probs=125.9

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC---ceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS---SSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQF   97 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~---~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~   97 (251)
                      .++.||+.||.|||-++|+|+||||+|  ||+....   .+||||||+|+.++....  ..+..||++|.|||++.+..|
T Consensus       668 FlvtQIL~ALr~LH~knIvHCDLKPEN--VLLas~~~FPQvKlCDFGfARiIgEksF--RrsVVGTPAYLaPEVLrnkGy  743 (888)
T KOG4236|consen  668 FLVTQILVALRYLHFKNIVHCDLKPEN--VLLASASPFPQVKLCDFGFARIIGEKSF--RRSVVGTPAYLAPEVLRNKGY  743 (888)
T ss_pred             HHHHHHHHHHHHhhhcceeeccCCchh--eeeccCCCCCceeeccccceeecchhhh--hhhhcCCccccCHHHHhhccc
Confidence            457899999999999999999999999  8886543   799999999999876643  345789999999999999999


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC--CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER--LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ...-|+||.|+|+|--++ |..||...  +++...|......  +.....+++++.++|+.+|+..-.+|-|.+..+.|.
T Consensus       744 NrSLDMWSVGVIiYVsLS-GTFPFNEd--EdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~  820 (888)
T KOG4236|consen  744 NRSLDMWSVGVIIYVSLS-GTFPFNED--EDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHP  820 (888)
T ss_pred             cccccceeeeEEEEEEec-ccccCCCc--cchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccch
Confidence            999999999999999999 99999754  3344444333222  223367899999999999999999999999999887


Q ss_pred             Hhh
Q psy2787         176 YRL  178 (251)
Q Consensus       176 ~~~  178 (251)
                      |-.
T Consensus       821 Wlq  823 (888)
T KOG4236|consen  821 WLQ  823 (888)
T ss_pred             hhh
Confidence            744

>KOG0608|consensus

Probab=99.91  E-value=9.4e-26  Score=195.41  Aligned_cols=169  Identities=14%  Similarity=0.154  Sum_probs=131.8

Q ss_pred             cccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC--C-
Q psy2787           2 SANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ--N-   71 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~--~-   71 (251)
                      +|+|.+.||+...+.       +-++.++.++..|+++.|..|+|||||||+|  ||+|.+|++||+|||||.-+.  . 
T Consensus       707 VMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDN--ILIDrdGHIKLTDFGLCTGfRWTHd  784 (1034)
T KOG0608|consen  707 VMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDN--ILIDRDGHIKLTDFGLCTGFRWTHD  784 (1034)
T ss_pred             EEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccc--eEEccCCceeeeeccccccceeccc
Confidence            589999999998543       3456677888899999999999999999999  999999999999999986421  0 


Q ss_pred             C--------------------------------------ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHH
Q psy2787          72 D--------------------------------------CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM  113 (251)
Q Consensus        72 ~--------------------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el  113 (251)
                      .                                      .........||..|+|||++....++..+|.||.|||||||
T Consensus       785 skYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em  864 (1034)
T KOG0608|consen  785 SKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEM  864 (1034)
T ss_pred             cccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHH
Confidence            0                                      00122346899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHhccCCCCCC---CHHHHHHH
Q psy2787         114 FTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPVEVYALMRQCWSKNPAERP---KFSTLKDC  174 (251)
Q Consensus       114 ~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~Rp---s~~~il~~  174 (251)
                      +. |+.||......+...++......+.++  -+++.++.++|.+++. +++.|.   -+++|..|
T Consensus       865 ~~-g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaH  928 (1034)
T KOG0608|consen  865 LV-GQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAH  928 (1034)
T ss_pred             hh-CCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcC
Confidence            99 999998877766666665555444443  5688999999887443 355664   24445555

>KOG0587|consensus

Probab=99.91  E-value=1.7e-25  Score=199.56  Aligned_cols=171  Identities=19%  Similarity=0.282  Sum_probs=139.8

Q ss_pred             CcccccchhHHHHHhcCCCCCC---------CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPCRKP---------LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~---------~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      ++||||..|+.-+..+..+..-         +.++++||.+||.+.++|||+|-.|  ||++.++.+|++|||++...+.
T Consensus        98 LVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~N--iLLT~e~~VKLvDFGvSaQlds  175 (953)
T KOG0587|consen   98 LVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQN--VLLTENAEVKLVDFGVSAQLDS  175 (953)
T ss_pred             EEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCce--EEEeccCcEEEeeeeeeeeeec
Confidence            4789999999998665544333         4455699999999999999999999  9999999999999999987654


Q ss_pred             CceeecCCCCcCcccCCCcccCCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCC
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHN-----QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEA  145 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~  145 (251)
                      . ....++..||+.|||||++...     .|+..+|+||+|++..||.. |.+|+.+..+...+..|-+.. ..+..|..
T Consensus       176 T-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIElad-G~PPl~DmHPmraLF~IpRNPPPkLkrp~k  253 (953)
T KOG0587|consen  176 T-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAE-GAPPLCDMHPMRALFLIPRNPPPKLKRPKK  253 (953)
T ss_pred             c-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcC-CCCCccCcchhhhhccCCCCCCccccchhh
Confidence            3 3355677899999999999743     46789999999999999999 999999887766555553221 11123577


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      ++.++.++|..||.+|-++||+..++++|.
T Consensus       254 Ws~~FndFIs~cL~Kd~e~RP~~~~ll~hp  283 (953)
T KOG0587|consen  254 WSKKFNDFISTCLVKDYEQRPSTEELLKHP  283 (953)
T ss_pred             HHHHHHHHHHHHHhhccccCcchhhhccCC
Confidence            889999999999999999999999999874

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.91  E-value=1.2e-24  Score=191.93  Aligned_cols=153  Identities=12%  Similarity=0.052  Sum_probs=110.4

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCC----
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQF----   97 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~----   97 (251)
                      ++.+++.||.|||+.+|+||||||+|  |+++.++.+||+|||+++..............+++.|+|||.+.....    
T Consensus       314 i~~ql~~aL~~lH~~~ivHrDLKp~N--ILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~  391 (507)
T PLN03224        314 VMRQVLTGLRKLHRIGIVHRDIKPEN--LLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRA  391 (507)
T ss_pred             HHHHHHHHHHHHHHCCeecCCCchHh--EEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCcc
Confidence            35677889999999999999999999  999999999999999997643322212222344778999998764221    


Q ss_pred             ------------------CchhHHHHHHHHHHHHHhCCCC-CCCCCChhH-----------HHHHHHhcCCCCCCCCCCc
Q psy2787          98 ------------------SQASDAWMFGVTIWEMFTFGAE-PWVGLNGMQ-----------ILQKIDREGERLPRPEACP  147 (251)
Q Consensus        98 ------------------~~~~Di~S~G~il~el~~~g~~-pf~~~~~~~-----------~~~~i~~~~~~~~~~~~~~  147 (251)
                                        ..+.||||+||++++|++ |.. ||.+.....           ....+.............+
T Consensus       392 ~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~-~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s  470 (507)
T PLN03224        392 PAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCV-PELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNK  470 (507)
T ss_pred             chhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHh-CCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccC
Confidence                              124699999999999999 775 775422110           1111111222233345678


Q ss_pred             HHHHHHHHHHhccCC---CCCCCHHHHHHHHHh
Q psy2787         148 VEVYALMRQCWSKNP---AERPKFSTLKDCLYR  177 (251)
Q Consensus       148 ~~~~~li~~cl~~dP---~~Rps~~~il~~l~~  177 (251)
                      ....+++.+|+..+|   .+|+|+.++++|.+.
T Consensus       471 ~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f  503 (507)
T PLN03224        471 EAGWDLACKLITKRDQANRGRLSVGQALSHRFF  503 (507)
T ss_pred             hHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence            899999999999876   689999999998764

>KOG0671|consensus

Probab=99.91  E-value=2.7e-26  Score=188.21  Aligned_cols=150  Identities=19%  Similarity=0.292  Sum_probs=114.6

Q ss_pred             CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc--------------------CCceEEccCCCCcccCCCceeecCC
Q psy2787          20 RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS--------------------SSSSSSGDFGMMRYSQNDCYVMTER   79 (251)
Q Consensus        20 ~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~--------------------~~~~kl~DFGla~~~~~~~~~~~~~   79 (251)
                      +.+..|+++++++||+.+++|-||||+|  ||+-+                    +..+||+|||.|......    ...
T Consensus       195 r~m~~QL~~sv~fLh~~kl~HTDLKPEN--ILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~  268 (415)
T KOG0671|consen  195 RHMGYQLLESVAFLHDLKLTHTDLKPEN--ILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH----HST  268 (415)
T ss_pred             HHHHHHHHHHHHHHHhcceeecCCChhe--EEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC----cce
Confidence            3445588999999999999999999999  54321                    235899999999875443    245


Q ss_pred             CCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH---HHHHHHhc-------CC---------CC
Q psy2787          80 KPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ---ILQKIDRE-------GE---------RL  140 (251)
Q Consensus        80 ~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~---~~~~i~~~-------~~---------~~  140 (251)
                      ...|..|.|||++.+.+++.++||||+||||+|+.+ |..-|++.++.+   +.+.|...       ..         +.
T Consensus       269 iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Elyt-G~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rl  347 (415)
T KOG0671|consen  269 IVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYT-GETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRL  347 (415)
T ss_pred             eeeccccCCchheeccCcCCccCceeeeeEEEEeec-cceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccc
Confidence            677888999999999999999999999999999999 999998876555   33333210       00         00


Q ss_pred             -----------------CCC--------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         141 -----------------PRP--------EACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       141 -----------------~~~--------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                       +.|        +....++.+|+++||..||.+|+|+.|++.|..
T Consensus       348 dw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpF  408 (415)
T KOG0671|consen  348 DWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPF  408 (415)
T ss_pred             cCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHH
Confidence                             000        112236889999999999999999999998864

>KOG0695|consensus

Probab=99.91  E-value=6.3e-25  Score=178.12  Aligned_cols=159  Identities=16%  Similarity=0.195  Sum_probs=129.3

Q ss_pred             ccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           3 ANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      -||.+.|+|.=.|++.       ++.+-.+++.||.|||+.|||+||||.+|  +|++..|++|++|+|+++.--.+. -
T Consensus       330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldn--vlldaeghikltdygmcke~l~~g-d  406 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDN--VLLDAEGHIKLTDYGMCKEGLGPG-D  406 (593)
T ss_pred             EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccc--eEEccCCceeecccchhhcCCCCC-c
Confidence            5889999988666543       34556678899999999999999999999  999999999999999998732221 1


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-------CChh-HHHHHHHhcCCCCCCCCCCc
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVG-------LNGM-QILQKIDREGERLPRPEACP  147 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~-------~~~~-~~~~~i~~~~~~~~~~~~~~  147 (251)
                      .+++.+||+.|.|||++.+..|+..+|.|++|++++||+. |+.||+-       .+.+ -+++-|...+.  .+|...+
T Consensus       407 ~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemma-grspfdivgm~n~d~ntedylfqvilekqi--riprsls  483 (593)
T KOG0695|consen  407 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMA-GRSPFDIVGMDNPDMNTEDYLFQVILEKQI--RIPRSLS  483 (593)
T ss_pred             ccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHc-CCCCcceecCCCcccchhHHHHHHHhhhcc--cccceee
Confidence            4567899999999999999999999999999999999999 9999942       2223 34555554444  4456777


Q ss_pred             HHHHHHHHHHhccCCCCCCC
Q psy2787         148 VEVYALMRQCWSKNPAERPK  167 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps  167 (251)
                      .....++..-+.+||.+|..
T Consensus       484 vkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  484 VKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             hhhHHHHHHhhcCCcHHhcC
Confidence            88889999999999999954

>KOG0662|consensus

Probab=99.91  E-value=2.8e-24  Score=160.45  Aligned_cols=155  Identities=19%  Similarity=0.205  Sum_probs=123.7

Q ss_pred             CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCC-C
Q psy2787          19 CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQ-F   97 (251)
Q Consensus        19 ~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~   97 (251)
                      ++.++-|+++||.++|++++.|||+||.|  .+++.+|.+|++|||+++.++-+- ...+....|.+|.+|.++.+.. |
T Consensus       103 ~rsfmlqllrgl~fchshnvlhrdlkpqn--llin~ngelkladfglarafgipv-rcysaevvtlwyrppdvlfgakly  179 (292)
T KOG0662|consen  103 VRSFMLQLLRGLGFCHSHNVLHRDLKPQN--LLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLY  179 (292)
T ss_pred             HHHHHHHHHhhhhhhhhhhhhhccCCcce--EEeccCCcEEecccchhhhcCCce-EeeeceeeeeeccCcceeeeeehh
Confidence            34567788899999999999999999999  999999999999999999876542 2334556788999999998755 7


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-----C----------C---C---------CCCcHHH
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-----P----------R---P---------EACPVEV  150 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-----~----------~---~---------~~~~~~~  150 (251)
                      +...|+||-|||+.|+..-|++-|+|.+..+.+.+|...-..+     |          .   +         +.....-
T Consensus       180 ~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~g  259 (292)
T KOG0662|consen  180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTG  259 (292)
T ss_pred             ccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchh
Confidence            8899999999999999988888899988776666653311000     0          0   0         2233456


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++++++.+.-+|.+|.+++..++|..
T Consensus       260 rdllqkll~cnp~qrisaeaalqhpy  285 (292)
T KOG0662|consen  260 RDLLQKLLKCNPAQRISAEAALQHPY  285 (292)
T ss_pred             HHHHHHHhccCcccccCHHHHhcCcc
Confidence            79999999999999999999988753

>KOG0984|consensus

Probab=99.90  E-value=1.3e-24  Score=165.24  Aligned_cols=109  Identities=18%  Similarity=0.228  Sum_probs=87.0

Q ss_pred             CCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC----CC
Q psy2787          22 PLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH----NQ   96 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~   96 (251)
                      ..--+.+||.|||++ .|||||+||+|  ||++..|++|+||||.+-.+.++-..  +...|-..|||||.+..    ..
T Consensus       153 Ia~Svv~al~~L~~kL~vIHRDvKPsN--iLIn~~GqVKiCDFGIsG~L~dSiAk--t~daGCkpYmaPEri~~e~n~~g  228 (282)
T KOG0984|consen  153 IAVSVVHALEFLHSKLSVIHRDVKPSN--ILINYDGQVKICDFGISGYLVDSIAK--TMDAGCKPYMAPERINPELNQKG  228 (282)
T ss_pred             hHHHHHHHHHHHHHHhhhhhccCCcce--EEEccCCcEEEcccccceeehhhhHH--HHhcCCCccCChhhcCcccCccc
Confidence            344456899999986 79999999999  99999999999999999887665322  22344556999998863    36


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCC-ChhHHHHHHHh
Q psy2787          97 FSQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQKIDR  135 (251)
Q Consensus        97 ~~~~~Di~S~G~il~el~~~g~~pf~~~-~~~~~~~~i~~  135 (251)
                      |+.++||||+|+++.||.+ ++.||+.. ++.+.+..+..
T Consensus       229 Y~vksDvWSLGItmiElA~-lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  229 YSVKSDVWSLGITMIEMAI-LRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             ceeehhhhhhhhhhhhhhh-ccccccccCCHHHHHHHHhc
Confidence            8899999999999999999 99999764 45555665543

>KOG1345|consensus

Probab=99.90  E-value=1.3e-24  Score=171.53  Aligned_cols=164  Identities=17%  Similarity=0.226  Sum_probs=121.6

Q ss_pred             cccccchhHHHHHhcC------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTE------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      ++|||++|||.+....      .+++...|+++|++|+|+++++|||||.+||+|+-.+...+||||||+++..+..   
T Consensus       100 ~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t---  176 (378)
T KOG1345|consen  100 VQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT---  176 (378)
T ss_pred             eeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce---
Confidence            5899999999998765      3677888999999999999999999999997777666779999999998754322   


Q ss_pred             ecCCCCcCcccCCCcccCCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCCChh-----HHHHHHHhcCCCCCCC--
Q psy2787          76 MTERKPLPCPWCPMESLKHN-----QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM-----QILQKIDREGERLPRP--  143 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~--  143 (251)
                       ......+..|.+||++...     ...+.+|+|.||++++.+++ |..||+.....     +..+..  .+..+..|  
T Consensus       177 -V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~clt-G~~PWQka~~~d~~Y~~~~~w~--~rk~~~~P~~  252 (378)
T KOG1345|consen  177 -VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLT-GKFPWQKASIMDKPYWEWEQWL--KRKNPALPKK  252 (378)
T ss_pred             -ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeec-CCCcchhhhccCchHHHHHHHh--cccCccCchh
Confidence             1222334459999876532     24678999999999999999 99999743221     112211  22223333  


Q ss_pred             -CCCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy2787         144 -EACPVEVYALMRQCWSKNPAERPKFSTLK  172 (251)
Q Consensus       144 -~~~~~~~~~li~~cl~~dP~~Rps~~~il  172 (251)
                       ...++.+..+..+-+..++++|-...++.
T Consensus       253 F~~fs~~a~r~Fkk~lt~~~~drcki~~~k  282 (378)
T KOG1345|consen  253 FNPFSEKALRLFKKSLTPRFKDRCKIWTAK  282 (378)
T ss_pred             hcccCHHHHHHHHHhcCCcccccchhHHHH
Confidence             34778889999999999999994444433

>KOG0670|consensus

Probab=99.87  E-value=1.8e-23  Score=177.73  Aligned_cols=164  Identities=15%  Similarity=0.223  Sum_probs=122.8

Q ss_pred             chhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccCCCceeecC
Q psy2787           7 ELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQNDCYVMTE   78 (251)
Q Consensus         7 ~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~~~~~~~~~   78 (251)
                      .|.+++.++...       ..-+..|+..||..|-..||+|+||||.|  ||+.++ .++||||||.|........... 
T Consensus       519 NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDN--iLVNE~k~iLKLCDfGSA~~~~eneitPY-  595 (752)
T KOG0670|consen  519 NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDN--ILVNESKNILKLCDFGSASFASENEITPY-  595 (752)
T ss_pred             hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccc--eEeccCcceeeeccCccccccccccccHH-
Confidence            455555554432       22345677789999999999999999999  999776 4789999999987655432111 


Q ss_pred             CCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC----------------
Q psy2787          79 RKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR----------------  142 (251)
Q Consensus        79 ~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~----------------  142 (251)
                        .....|.|||++.|.+|+...|+||.||+|||+.| |+.-|+|.++-+++...+.-...+|.                
T Consensus       596 --LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYt-GkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d  672 (752)
T KOG0670|consen  596 --LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYT-GKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQD  672 (752)
T ss_pred             --HHHHhccCcceeecCcccCCccceeeceeeEEeec-cceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccc
Confidence              12234999999999999999999999999999999 99999998877766654331111110                


Q ss_pred             ------------------------C-----------C-------CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         143 ------------------------P-----------E-------ACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       143 ------------------------~-----------~-------~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                              |           +       ..-..+.+|+.+|+..||++|.|..++|.|..
T Consensus       673 ~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpF  748 (752)
T KOG0670|consen  673 LNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPF  748 (752)
T ss_pred             cceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCc
Confidence                                    0           0       01135889999999999999999999998753

>KOG1151|consensus

Probab=99.87  E-value=9e-23  Score=170.88  Aligned_cols=172  Identities=19%  Similarity=0.302  Sum_probs=130.9

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhC--CcccCCCCCCCceEEEcc---CCceEEccCCCCccc
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVN--NICSCQFSSSSLLILFFS---SSSSSSGDFGMMRYS   69 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~--~iiHrdlkp~ni~il~~~---~~~~kl~DFGla~~~   69 (251)
                      ..|||+.+||-=++++.       ++.++-|++.||.||-+.  .|||-||||.|  ||+..   .|.+||+|||+++.+
T Consensus       546 VLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgN--ILLv~GtacGeIKITDFGLSKIM  623 (775)
T KOG1151|consen  546 VLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGN--ILLVNGTACGEIKITDFGLSKIM  623 (775)
T ss_pred             eeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCcc--EEEecCcccceeEeeecchhhhc
Confidence            46999999887666543       344566788999999765  69999999999  77643   468999999999987


Q ss_pred             CCCce------eecCCCCcCcccCCCcccCCC----CCCchhHHHHHHHHHHHHHhCCCCCCCCC-ChhHHHHH--H-Hh
Q psy2787          70 QNDCY------VMTERKPLPCPWCPMESLKHN----QFSQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQK--I-DR  135 (251)
Q Consensus        70 ~~~~~------~~~~~~~~~~~y~aPE~~~~~----~~~~~~Di~S~G~il~el~~~g~~pf~~~-~~~~~~~~--i-~~  135 (251)
                      +++.+      ..++...||.+|.+||.+.-+    ..+.++||||.|||+|..+. |+.||... +..++++.  | ..
T Consensus       624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClY-GrKPFGhnqsQQdILqeNTIlkA  702 (775)
T KOG1151|consen  624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLY-GRKPFGHNQSQQDILQENTILKA  702 (775)
T ss_pred             cCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhc-cCCCCCCchhHHHHHhhhchhcc
Confidence            65543      344567899999999987633    46889999999999999999 99999653 33333332  1 11


Q ss_pred             cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         136 EGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       136 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ....+|.-+.++.+..++|++||++.-++|.+..++..+..
T Consensus       703 tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpy  743 (775)
T KOG1151|consen  703 TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPY  743 (775)
T ss_pred             eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCcc
Confidence            23344555678999999999999999999998887765543

>KOG0668|consensus

Probab=99.86  E-value=1.2e-21  Score=151.53  Aligned_cols=172  Identities=14%  Similarity=0.142  Sum_probs=124.4

Q ss_pred             cccccchhHHHHHhcCC----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCcccCCCceee
Q psy2787           2 SANFAELNAFQENYTEP----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~~~~~~~~   76 (251)
                      +-||.++.||...+..-    .+-++.|+++||.|+|+.||+|||+||.|  +.++... .++|+|.|+|.++....  .
T Consensus       113 iFE~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhN--vmIdh~~rkLrlIDWGLAEFYHp~~--e  188 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHN--VMIDHELRKLRLIDWGLAEFYHPGK--E  188 (338)
T ss_pred             HhhhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcce--eeechhhceeeeeecchHhhcCCCc--e
Confidence            34677777776654432    34567899999999999999999999999  8888764 68999999999865443  2


Q ss_pred             cCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCC-CCCChhHHHHHHHh-------------cC----
Q psy2787          77 TERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPW-VGLNGMQILQKIDR-------------EG----  137 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf-~~~~~~~~~~~i~~-------------~~----  137 (251)
                      .+.+..+..|-.||.+.. ..|+..-|+|||||++..|+. .+.|| .|.++.+.+-+|..             -+    
T Consensus       189 YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miF-rkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ld  267 (338)
T KOG0668|consen  189 YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF-RKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLD  267 (338)
T ss_pred             eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHh-ccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCC
Confidence            233344455788998875 457889999999999999998 67666 55544333322211             00    


Q ss_pred             ----------CCC-------CCCCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         138 ----------ERL-------PRPEA-CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       138 ----------~~~-------~~~~~-~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                                .+.       ....+ .++++.+++.+.|..|-.+|+|+.+++.|....
T Consensus       268 p~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~  326 (338)
T KOG0668|consen  268 PQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFA  326 (338)
T ss_pred             hhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHH
Confidence                      000       00112 458999999999999999999999999986543

>KOG0590|consensus

Probab=99.85  E-value=5.1e-22  Score=178.76  Aligned_cols=171  Identities=12%  Similarity=0.130  Sum_probs=132.8

Q ss_pred             ccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc--
Q psy2787           3 ANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC--   73 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~--   73 (251)
                      ||||+. ||......       ....++.|+..|++|+|+.||.|||+|++|  +++..+|.+||+|||.+.....+.  
T Consensus       400 mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~en--ll~~~~g~lki~Dfg~~~vf~~~~e~  476 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLEN--LLVTENGILKIIDFGAASVFRYPWEK  476 (601)
T ss_pred             hhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCcccc--EEEecCCceEEeecCcceeeccCcch
Confidence            789988 88876554       345689999999999999999999999999  999999999999999988743322  


Q ss_pred             -eeecCCCCcCcccCCCcccCCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCChhHH--HHHHHhcCCCC-----CCCC
Q psy2787          74 -YVMTERKPLPCPWCPMESLKHNQFS-QASDAWMFGVTIWEMFTFGAEPWVGLNGMQI--LQKIDREGERL-----PRPE  144 (251)
Q Consensus        74 -~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~S~G~il~el~~~g~~pf~~~~~~~~--~~~i~~~~~~~-----~~~~  144 (251)
                       ........|...|+|||++.+..|. ...||||.|+++..|.+ |+.||.-....+-  .......+...     ....
T Consensus       477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~-~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  555 (601)
T KOG0590|consen  477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMIL-GRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS  555 (601)
T ss_pred             hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEec-CCCccccccccccchhhhccccccccccChHHHHH
Confidence             2455667888889999999999887 47899999999999999 9999965432211  11110011111     1124


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .++.+.+.+|.++|+.+|.+|.|+.+|++.-|-
T Consensus       556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~  588 (601)
T KOG0590|consen  556 LLPRETRIIIYRMLQLDPTKRITIEQILNDEWI  588 (601)
T ss_pred             hchhhHHHHHHHHccCChhheecHHHHhhChHh
Confidence            477889999999999999999999999886553

>KOG0576|consensus

Probab=99.84  E-value=2.1e-21  Score=169.24  Aligned_cols=171  Identities=16%  Similarity=0.213  Sum_probs=136.2

Q ss_pred             CcccccchhHHHHHhcCCCC-------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPCR-------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~-------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.||||..|++++-++..-.       ..-++.++||+|||+.|=+|||||-.|  |++++.|.+|++|||.+-.++.. 
T Consensus        89 icMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGan--illtd~gDvklaDfgvsaqitat-  165 (829)
T KOG0576|consen   89 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGAN--ILLTDEGDVKLADFGVSAQITAT-  165 (829)
T ss_pred             EEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccc--eeecccCceeecccCchhhhhhh-
Confidence            36899999999996653320       111233489999999999999999999  99999999999999998765433 


Q ss_pred             eeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC---CCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR---PEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~  147 (251)
                      ..+.....||+.|||||+..   .+.|...+|||++|+...|+-. -+.|..+...+..+..+...+..++.   ....+
T Consensus       166 i~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~e-Lqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws  244 (829)
T KOG0576|consen  166 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGE-LQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWS  244 (829)
T ss_pred             hhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhh-cCCcccccchHHHHHHhhccCCCCCcccCCccch
Confidence            22445678999999999864   5678999999999999999987 77787777666666666555555543   35588


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +.+.++++.|+.++|++||+++.++.|-
T Consensus       245 ~~fh~fvK~altknpKkRptaeklL~h~  272 (829)
T KOG0576|consen  245 EFFHNFVKGALTKNPKKRPTAEKLLQHP  272 (829)
T ss_pred             HHHHHHHHHHhcCCCccCCChhhheece
Confidence            8999999999999999999999888753

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.82  E-value=9.2e-21  Score=148.82  Aligned_cols=137  Identities=22%  Similarity=0.334  Sum_probs=110.3

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-CCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-SSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~~~~~~   72 (251)
                      .+|+.+.++|.+.....        ....+.++++++++||+.+++|+||+|.|  |+++. .+.++|+|||.+......
T Consensus        69 ~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~n--i~~~~~~~~~~l~d~~~~~~~~~~  146 (215)
T cd00180          69 VMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPEN--ILLDSDNGKVKLADFGLSKLLTSD  146 (215)
T ss_pred             EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhh--EEEeCCCCcEEEecCCceEEccCC
Confidence            45667666666655432        22346677899999999999999999999  99998 899999999999875443


Q ss_pred             ceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .. ......+...|++||.+... ..+.++|+|++|++++++                                  ..+.
T Consensus       147 ~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------~~~~  191 (215)
T cd00180         147 KS-LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------PELK  191 (215)
T ss_pred             cc-hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------HHHH
Confidence            21 12334456679999999876 778999999999999998                                  5789


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      +++.+|+..+|++||++.++++++
T Consensus       192 ~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         192 DLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHHHHHhhCCcccCcCHHHHhhCC
Confidence            999999999999999999998753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.79  E-value=1.8e-19  Score=143.58  Aligned_cols=130  Identities=17%  Similarity=0.217  Sum_probs=99.5

Q ss_pred             cccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.......        ..+.+++.++.+||+.+++|+|++|.|  |+++.++.++|+|||.+.......
T Consensus        75 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~n--i~v~~~~~~~l~d~g~~~~~~~~~  152 (225)
T smart00221       75 VMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPEN--ILLGMDGLVKLADFGLARFIHRDL  152 (225)
T ss_pred             EEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCCEEEeeCceeeEecCcc
Confidence            4577777677766544322        345667789999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCccc-CCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-CChh-HHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESL-KHNQFSQASDAWMFGVTIWEMFTFGAEPWVG-LNGM-QILQKID  134 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~S~G~il~el~~~g~~pf~~-~~~~-~~~~~i~  134 (251)
                      ........++..|++||.+ ....++.++|+|+||+++++|++ |+.||.+ .... .+.+.+.
T Consensus       153 ~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~-g~~pf~~~~~~~~~~~~~~~  215 (225)
T smart00221      153 AALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLW-GPEPFSGEGEFTSLLSDVWS  215 (225)
T ss_pred             cccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHH-CCCCccccchhHHHHHHHHh
Confidence            1112234556679999998 66677889999999999999999 9999987 4444 5555553

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1167|consensus

Probab=99.78  E-value=5e-20  Score=153.20  Aligned_cols=172  Identities=17%  Similarity=0.249  Sum_probs=115.8

Q ss_pred             ccccchhHHHHHhcC----CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccC-------
Q psy2787           3 ANFAELNAFQENYTE----PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQ-------   70 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~----~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~-------   70 (251)
                      +||.+-.++.+.+..    ....++..+.+||.++|++|||||||||+|  +|.+.. +.-.|+|||+|...+       
T Consensus       114 lp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsN--FL~n~~t~rg~LvDFgLA~~~d~~~~~~~  191 (418)
T KOG1167|consen  114 LPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSN--FLYNRRTQRGVLVDFGLAQRYDGYQQTEH  191 (418)
T ss_pred             ecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhccCccccCCCccc--cccccccCCceEEechhHHHHHhhhhhhh
Confidence            444444444443332    234567788899999999999999999999  776543 466799999997210       


Q ss_pred             ----------C-----------------Cce---------eecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHH
Q psy2787          71 ----------N-----------------DCY---------VMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEM  113 (251)
Q Consensus        71 ----------~-----------------~~~---------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el  113 (251)
                                .                 ..+         .......||++|.|||++.. ...+.++||||.|+|+.-+
T Consensus       192 s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lsl  271 (418)
T KOG1167|consen  192 SRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSL  271 (418)
T ss_pred             hhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehh
Confidence                      0                 000         11224679999999999864 4568899999999999999


Q ss_pred             HhCCCCCCCC-CChhHHHHHHH-------------hcCC-------------------------------C----C-CCC
Q psy2787         114 FTFGAEPWVG-LNGMQILQKID-------------REGE-------------------------------R----L-PRP  143 (251)
Q Consensus       114 ~~~g~~pf~~-~~~~~~~~~i~-------------~~~~-------------------------------~----~-~~~  143 (251)
                      ++ ++.||.- .+..+....+.             ..+.                               .    . ...
T Consensus       272 ls-~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~  350 (418)
T KOG1167|consen  272 LS-RRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGS  350 (418)
T ss_pred             hc-cccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeecccc
Confidence            99 9999821 11100000000             0000                               0    0 001


Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       144 ~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +..+..+.+++.+|++.||.+|.|++++++|...
T Consensus       351 d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF  384 (418)
T KOG1167|consen  351 DVFPALLLDLLDKCLELNPQKRITAEDALKHPFF  384 (418)
T ss_pred             ccccHHHHHHHHHHccCChhhcccHHHHhcCcCC
Confidence            3345578999999999999999999999988543

>KOG0606|consensus

Probab=99.78  E-value=2.8e-19  Score=163.15  Aligned_cols=137  Identities=18%  Similarity=0.276  Sum_probs=116.5

Q ss_pred             hHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce--------------eecCCCCcCcccCCCccc
Q psy2787          27 RRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY--------------VMTERKPLPCPWCPMESL   92 (251)
Q Consensus        27 ~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~--------------~~~~~~~~~~~y~aPE~~   92 (251)
                      +.+++|+|+.||+|||+||+|  .+++.-|.+|++|||+++.......              ......+||+.|.|||++
T Consensus       153 vla~Eylh~ygivhrdlkpdn--llIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi  230 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDN--LLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI  230 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCc--ceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence            578999999999999999999  9999999999999999987321110              011235899999999999


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC-CCCCCcHHHHHHHHHHhccCCCCCC
Q psy2787          93 KHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP-RPEACPVEVYALMRQCWSKNPAERP  166 (251)
Q Consensus        93 ~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~li~~cl~~dP~~Rp  166 (251)
                      .-..|++.+|.|++|+|+||.+. |..||.+.+.++++..+.......+ ..+..++++++++.++|+.+|..|.
T Consensus       231 lrqgygkpvdwwamGiIlyeFLV-gcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rl  304 (1205)
T KOG0606|consen  231 LRQGYGKPVDWWAMGIILYEFLV-GCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRL  304 (1205)
T ss_pred             hhhccCCCccHHHHHHHHHHHhe-eeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhc
Confidence            99999999999999999999999 9999999999998887766544443 3456888999999999999999994

>KOG4158|consensus

Probab=99.77  E-value=1.5e-18  Score=144.07  Aligned_cols=150  Identities=14%  Similarity=0.154  Sum_probs=114.2

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC--ceEEccCCCCcccCC-----CceeecCCCCcCcccCCCcccCC
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS--SSSSGDFGMMRYSQN-----DCYVMTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~--~~kl~DFGla~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~   94 (251)
                      ++-|+++|+.|||.+||.|||+|++||++-+++++  .+.|+|||++-.-+.     +.........|....||||+...
T Consensus       346 ~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta  425 (598)
T KOG4158|consen  346 ILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA  425 (598)
T ss_pred             HHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence            56788899999999999999999999666667665  578999999864222     11122334677888999999874


Q ss_pred             CC-----C-CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH
Q psy2787          95 NQ-----F-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF  168 (251)
Q Consensus        95 ~~-----~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~  168 (251)
                      .+     . -.++|.|+.|.+.||++. ...||.+.....+-..-.++..-++.|+.+++.+++++...+..||++|++.
T Consensus       426 ~PGp~avvny~kAD~WA~GalaYEIfg-~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp  504 (598)
T KOG4158|consen  426 VPGPNAVVNYEKADTWAAGALAYEIFG-RSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSP  504 (598)
T ss_pred             CCCCceeeccchhhhhhhhhhHHHHhc-cCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCc
Confidence            22     1 258999999999999999 8899987554433222234555667788999999999999999999999986


Q ss_pred             HHHH
Q psy2787         169 STLK  172 (251)
Q Consensus       169 ~~il  172 (251)
                      .-..
T Consensus       505 ~iAA  508 (598)
T KOG4158|consen  505 NIAA  508 (598)
T ss_pred             cHHH
Confidence            5443

>KOG1023|consensus

Probab=99.77  E-value=3.1e-20  Score=160.92  Aligned_cols=234  Identities=15%  Similarity=0.235  Sum_probs=156.5

Q ss_pred             ccccchhHHHHHhcCC---C-----CCCCchhhHHhhhhhhCCc-ccCCCCCCCceEEEccCCceEEccCCCCcccCC-C
Q psy2787           3 ANFAELNAFQENYTEP---C-----RKPLPPERRGYGTFSVNNI-CSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN-D   72 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~---~-----~~~~~~~~~gl~~lH~~~i-iHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~-~   72 (251)
                      -+||.-|++++.....   .     --+++.+.+||+|||...| .|+.+++.|  ++++.++.+|++|||+...... .
T Consensus        26 ~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~n--Clvd~~w~lklt~~Gl~~~~~~~~  103 (484)
T KOG1023|consen   26 WEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSN--CLVDSRWVLKLTDFGLNSLLEETA  103 (484)
T ss_pred             EeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccc--ceeeeeEEEEechhhhcccccccc
Confidence            4688888888854431   1     1246778899999999887 999999999  9999999999999999877532 1


Q ss_pred             ceeecCCCCcCcccCCCcccCCC---C----CCchhHHHHHHHHHHHHHhCCCCCCCCC----ChhHHHHHHHhcCCCCC
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHN---Q----FSQASDAWMFGVTIWEMFTFGAEPWVGL----NGMQILQKIDREGERLP  141 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~---~----~~~~~Di~S~G~il~el~~~g~~pf~~~----~~~~~~~~i~~~~~~~~  141 (251)
                      ............-|.|||.+.+.   .    .++++||||||++++|+++ ...||...    ...++...+...+..+.
T Consensus       104 ~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~-r~~~~~~~~~~~~~~eii~~~~~~~~~~~  182 (484)
T KOG1023|consen  104 EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF-RSGPFDLRNLVEDPDEIILRVKKGGSNPF  182 (484)
T ss_pred             cccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh-ccCccccccccCChHHHHHHHHhcCCCCc
Confidence            11111222334469999998863   1    4678999999999999999 89999652    22456666544233332


Q ss_pred             CC-----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH---HhhhhccccccCCcccccCCCeEEEecCCC
Q psy2787         142 RP-----EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM---KATQNCHEIDEEGKLYIDAGDQIVIIEGDP  213 (251)
Q Consensus       142 ~~-----~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  213 (251)
                      .|     ...++++..++.+||..+|++||++..+-..+..+.....   .....     ....+.......-..++.+.
T Consensus       183 rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~~~nl~D~-----m~~~le~Y~~nLe~~v~eRt  257 (484)
T KOG1023|consen  183 RPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSSKGNLMDS-----LFRMLESYADNLEKLVDERT  257 (484)
T ss_pred             CcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccccccchhHHH-----HHHHHHHHHhhhHHHHHHHH
Confidence            22     1355578999999999999999999999888877665321   00000     00001111111111222344


Q ss_pred             CCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         214 ECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      ............+...++|+.+++.++.+..
T Consensus       258 ~~l~~e~~k~d~LL~~mLP~~VA~~lk~G~~  288 (484)
T KOG1023|consen  258 AELEEEKKKTDTLLGQMLPKSVAESLKLGKT  288 (484)
T ss_pred             HHHHHHHHHHHHHHHHhcCHHHhhHhhcCCc
Confidence            4444445566778889999999998877654

>KOG0195|consensus

Probab=99.76  E-value=2.2e-18  Score=136.75  Aligned_cols=168  Identities=20%  Similarity=0.345  Sum_probs=134.3

Q ss_pred             cccccchhHHHHHhcC---------CCCCCCchhhHHhhhhhhCC--cccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTE---------PCRKPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~---------~~~~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      +.-|++.|+|...+.+         ...+|.-.+++|++|||+..  |.---|.+..  +.+|++.+++|+- +-+++  
T Consensus       265 isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~h--vmidedltarism-ad~kf--  339 (448)
T KOG0195|consen  265 ISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKH--VMIDEDLTARISM-ADTKF--  339 (448)
T ss_pred             eeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccce--EEecchhhhheec-cccee--
Confidence            3457778888776543         35677888899999999964  3445678888  9999998877652 11111  


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCC---chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCc
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFS---QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                         ..........++||+||.+...+-+   .++|+|||++++||+.| .+.||.+.++.+.-.++.-++.+..+|+.++
T Consensus       340 ---sfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~t-revpfadlspmecgmkialeglrv~ippgis  415 (448)
T KOG0195|consen  340 ---SFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNT-REVPFADLSPMECGMKIALEGLRVHIPPGIS  415 (448)
T ss_pred             ---eeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhc-cccccccCCchhhhhhhhhccccccCCCCcc
Confidence               1122334566789999999865432   57999999999999999 9999999999998888888999999999999


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ..+..++.-|...||.+||.++.++-.|++.
T Consensus       416 ~hm~klm~icmnedpgkrpkfdmivpilekm  446 (448)
T KOG0195|consen  416 RHMNKLMNICMNEDPGKRPKFDMIVPILEKM  446 (448)
T ss_pred             HHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence            9999999999999999999999998888765

>KOG1152|consensus

Probab=99.74  E-value=4.3e-19  Score=152.91  Aligned_cols=99  Identities=13%  Similarity=0.256  Sum_probs=87.1

Q ss_pred             CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCC-
Q psy2787          19 CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQF-   97 (251)
Q Consensus        19 ~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-   97 (251)
                      .+-.+.|++-|.++||++||||||||-+|  +.++.+|-+||+|||.|....+.   ......||..|.|||++.+..| 
T Consensus       672 Ak~IFkQV~agi~hlh~~~ivhrdikden--vivd~~g~~klidfgsaa~~ksg---pfd~f~gtv~~aapevl~g~~y~  746 (772)
T KOG1152|consen  672 AKLIFKQVVAGIKHLHDQGIVHRDIKDEN--VIVDSNGFVKLIDFGSAAYTKSG---PFDVFVGTVDYAAPEVLGGEKYL  746 (772)
T ss_pred             HHHHHHHHHhccccccccCceeccccccc--EEEecCCeEEEeeccchhhhcCC---CcceeeeeccccchhhhCCCccC
Confidence            34468899999999999999999999999  99999999999999998775554   3466789999999999999876 


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCC
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVG  123 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~  123 (251)
                      ++.-|||++|+++|.++. .+.||..
T Consensus       747 gk~qdiwalgillytivy-kenpyyn  771 (772)
T KOG1152|consen  747 GKPQDIWALGILLYTIVY-KENPYYN  771 (772)
T ss_pred             CCcchhhhhhheeeEEEe-ccCCCcC
Confidence            578999999999999998 8888853

>KOG1033|consensus

Probab=99.74  E-value=8.4e-19  Score=150.02  Aligned_cols=157  Identities=19%  Similarity=0.287  Sum_probs=112.7

Q ss_pred             ccccchhHHHHHhcCC----------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           3 ANFAELNAFQENYTEP----------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~----------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |+++....|.+.+.+.          +...+.|+..|++|   ++.+|||+||.|  |+...+..+||+|||+.......
T Consensus       335 Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~n--if~~~d~q~kIgDFgl~ts~~~~  409 (516)
T KOG1033|consen  335 MNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSN--IFFSDDDQLKIGDFGLVTSQDKD  409 (516)
T ss_pred             hhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccc--cccccchhhhhhhhhheeecccC
Confidence            5677777887766432          23345566788888   999999999999  88888889999999998764433


Q ss_pred             c-----eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCC-CCCCC
Q psy2787          73 C-----YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERL-PRPEA  145 (251)
Q Consensus        73 ~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~-~~~~~  145 (251)
                      .     ....+...||..||+||.+.+..|+.++||||+|++++|++.    +|..... ......+ +.+.-+ ....+
T Consensus       410 ~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~----~f~T~~er~~t~~d~-r~g~ip~~~~~d  484 (516)
T KOG1033|consen  410 ETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI----QFSTQFERIATLTDI-RDGIIPPEFLQD  484 (516)
T ss_pred             CcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH----HhccHHHHHHhhhhh-hcCCCChHHhhc
Confidence            2     223455688999999999999999999999999999999998    3322111 1122222 222222 22233


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFST  170 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~  170 (251)
                      .| .-..|+++++...|.+||++.+
T Consensus       485 ~p-~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  485 YP-EEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             Cc-HHHHHHHHhcCCCcccCchHHH
Confidence            44 3468999999999999995443

>KOG1164|consensus

Probab=99.71  E-value=9.5e-17  Score=135.74  Aligned_cols=156  Identities=12%  Similarity=0.129  Sum_probs=115.9

Q ss_pred             CchhhHHhhhhhhCCcccCCCCCCCceEEEccC-----CceEEccCCCCc--ccC-CCc---ee--e-cCCCCcCcccCC
Q psy2787          23 LPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-----SSSSSGDFGMMR--YSQ-NDC---YV--M-TERKPLPCPWCP   88 (251)
Q Consensus        23 ~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-----~~~kl~DFGla~--~~~-~~~---~~--~-~~~~~~~~~y~a   88 (251)
                      ..|++.+|++||+.|++||||||+|  +.++..     ..+.+.|||+++  ... ...   ..  . .....||.+|++
T Consensus       128 a~q~l~~l~~lH~~G~iHRDiKp~N--~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S  205 (322)
T KOG1164|consen  128 AIQNLNALEDLHSKGFIHRDIKPEN--FVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYAS  205 (322)
T ss_pred             HHHHHHHHHHHHhcCcccCCcCHHH--eeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCcccccc
Confidence            4467789999999999999999999  766654     468999999999  321 211   11  1 223559999999


Q ss_pred             CcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC---CCCCCcHHHHHHHHHHhccCCCCC
Q psy2787          89 MESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP---RPEACPVEVYALMRQCWSKNPAER  165 (251)
Q Consensus        89 PE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~li~~cl~~dP~~R  165 (251)
                      +.+..+...+.+.|+||++.++.+++. |..||.+.........+........   .....+.++..+...+-..+...+
T Consensus       206 ~~~H~~~e~~r~DDles~~Y~l~el~~-g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (322)
T KOG1164|consen  206 INVHLGIEQGRRDDLESLFYMLLELLK-GSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDK  284 (322)
T ss_pred             HHHhCCCccCCchhhhhHHHHHHHHhc-CCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCC
Confidence            999999999999999999999999999 9999977553222222222111111   233466788888888888999999


Q ss_pred             CCHHHHHHHHHhhcHH
Q psy2787         166 PKFSTLKDCLYRLTPA  181 (251)
Q Consensus       166 ps~~~il~~l~~~~~~  181 (251)
                      |....+...+......
T Consensus       285 Pdy~~~~~~l~~~~~~  300 (322)
T KOG1164|consen  285 PDYEKLAELLKDVFDS  300 (322)
T ss_pred             CCHHHHHHHHHHHHHh
Confidence            9999998887665544

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.71  E-value=1.8e-18  Score=141.44  Aligned_cols=129  Identities=19%  Similarity=0.288  Sum_probs=87.5

Q ss_pred             chhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC--------C
Q psy2787          24 PPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH--------N   95 (251)
Q Consensus        24 ~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~   95 (251)
                      .|+.+.+++||+.||+|+||+|+|  ++++.+|.++|+||+.....+...  ..  ...+..|.+||....        .
T Consensus       152 ~Q~I~lvA~Lh~~GlVHgdi~~~n--fll~~~G~v~Lg~F~~~~r~g~~~--~~--~~~~~~~~PPe~~~~~~~~~~~~~  225 (288)
T PF14531_consen  152 VQMIRLVANLHSYGLVHGDIKPEN--FLLDQDGGVFLGDFSSLVRAGTRY--RC--SEFPVAFTPPELESCAGQFGQNNA  225 (288)
T ss_dssp             HHHHHHHHHHHHTTEEEST-SGGG--EEE-TTS-EEE--GGGEEETTEEE--EG--GGS-TTTS-HHHHHHHTSCHHSEE
T ss_pred             HHHHHHHHHHhhcceEecccceee--EEEcCCCCEEEcChHHHeecCcee--ec--cCCCcccCChhhhhhhcccCcccc
Confidence            455688999999999999999999  999999999999998766544322  11  233456899987643        2


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCC
Q psy2787          96 QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER  165 (251)
Q Consensus        96 ~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~R  165 (251)
                      .++.+.|.|++|+++|.|++ |..||...........      ......++|+.++.||..+|+.+|.+|
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC-~~lPf~~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWC-GRLPFGLSSPEADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHH-SS-STCCCGGGSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             eeeeccCHHHHHHHHHHHHH-ccCCCCCCCccccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            46889999999999999999 9999976543221110      111112688999999999999999987

>KOG0603|consensus

Probab=99.70  E-value=2.7e-18  Score=149.63  Aligned_cols=150  Identities=19%  Similarity=0.294  Sum_probs=118.6

Q ss_pred             ccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           3 ANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+|...+++.......       -..++.+++.|++++|+.+|+|||+|++|  |+++.+|++|+.|||+++......  
T Consensus        76 ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~en--illd~~Ghi~~tdfglske~v~~~--  151 (612)
T KOG0603|consen   76 LDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLEN--VLLLLEGHIKLTDFGLSKEAVKEK--  151 (612)
T ss_pred             hhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccc--eeecccCccccCCchhhhHhHhhh--
Confidence            3455555665543322       12345566789999999999999999999  999999999999999999744332  


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHH
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMR  155 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~  155 (251)
                         ..+||..|||||+++  .....+|.||||++.++|++ |..||.+    ++...|...  .+..|...+..+.+++.
T Consensus       152 ---~~cgt~eymApEI~~--gh~~a~D~ws~gvl~fellt-g~~pf~~----~~~~~Il~~--~~~~p~~l~~~a~~~~~  219 (612)
T KOG0603|consen  152 ---IACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLT-GTLPFGG----DTMKRILKA--ELEMPRELSAEARSLFR  219 (612)
T ss_pred             ---hcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhh-CCCCCch----HHHHHHhhh--ccCCchhhhHHHHHHHH
Confidence               128899999999998  45788999999999999999 9999987    555555433  34556678889999999


Q ss_pred             HHhccCCCCCCCH
Q psy2787         156 QCWSKNPAERPKF  168 (251)
Q Consensus       156 ~cl~~dP~~Rps~  168 (251)
                      +++..+|.+|.-.
T Consensus       220 ~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  220 QLFKRNPENRLGA  232 (612)
T ss_pred             HHHhhCHHHHhcc
Confidence            9999999999644

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.70  E-value=1e-16  Score=133.64  Aligned_cols=151  Identities=19%  Similarity=0.213  Sum_probs=117.8

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCcccCCCcee-----ecCCCCcCcccCCCcccCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYSQNDCYV-----MTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~   94 (251)
                      .++.|++.|+.|+|+.+++|||+||+|  |+++..+ .++++|||.++........     ......++..|++||.+.+
T Consensus       105 ~~~~~~~~~l~~~H~~~~~hrd~kp~n--il~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~  182 (384)
T COG0515         105 FILAQILSALEYLHSKGIIHRDIKPEN--ILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLG  182 (384)
T ss_pred             HHHHHHHHHHHHHHhCCeeccCCCHHH--eeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcC
Confidence            456777889999999999999999999  9999988 7999999999864433221     2456788899999999987


Q ss_pred             ---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh----hHHHHHHHhcCCC-CC--CCCCC----cHHHHHHHHHHhcc
Q psy2787          95 ---NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG----MQILQKIDREGER-LP--RPEAC----PVEVYALMRQCWSK  160 (251)
Q Consensus        95 ---~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~----~~~~~~i~~~~~~-~~--~~~~~----~~~~~~li~~cl~~  160 (251)
                         ...+...|+||+|++++++++ |..||.....    ......+...... ..  .....    ...+.+++..|+..
T Consensus       183 ~~~~~~~~~~D~~s~g~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (384)
T COG0515         183 LSLAYASSSSDIWSLGITLYELLT-GLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAK  261 (384)
T ss_pred             CCCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhc
Confidence               567889999999999999999 9999877653    4444544333322 11  11222    25788999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy2787         161 NPAERPKFSTLKDC  174 (251)
Q Consensus       161 dP~~Rps~~~il~~  174 (251)
                      +|..|.+......+
T Consensus       262 ~~~~r~~~~~~~~~  275 (384)
T COG0515         262 DPKNRLSSSSDLSH  275 (384)
T ss_pred             CchhcCCHHHHhhc
Confidence            99999998877765

>KOG1240|consensus

Probab=99.69  E-value=5.1e-17  Score=149.05  Aligned_cols=145  Identities=16%  Similarity=0.164  Sum_probs=103.8

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc--c--CCCc---eeecCCCCcCcccCCCcccCC
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY--S--QNDC---YVMTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~--~--~~~~---~~~~~~~~~~~~y~aPE~~~~   94 (251)
                      ++.|+++||..+|..||+|+|||.+|  ||++.=+.+.|+||..-+.  +  +++.   +...++..-++ |.|||.+..
T Consensus       125 iaFQLL~al~qcH~~gVcHGDIKsEN--ILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtC-YiAPERFv~  201 (1431)
T KOG1240|consen  125 IAFQLLKALSQCHKLGVCHGDIKSEN--ILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTC-YIAPERFVS  201 (1431)
T ss_pred             HHHHHHHHHHHHHHcCccccccccce--EEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceee-ecChHhhhc
Confidence            45678899999999999999999999  9999888899999987654  1  1111   12223334444 999998753


Q ss_pred             C----------C-CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC----CCCCcHHHHHHHHHHhc
Q psy2787          95 N----------Q-FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR----PEACPVEVYALMRQCWS  159 (251)
Q Consensus        95 ~----------~-~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~li~~cl~  159 (251)
                      .          . .+++-||||+||++.|+++.|+++|.   ..+++..- ..+ ....    ..--...+++++..|++
T Consensus       202 ~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~---LSQL~aYr-~~~-~~~~e~~Le~Ied~~~Rnlil~Mi~  276 (1431)
T KOG1240|consen  202 ALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT---LSQLLAYR-SGN-ADDPEQLLEKIEDVSLRNLILSMIQ  276 (1431)
T ss_pred             cccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc---HHHHHhHh-ccC-ccCHHHHHHhCcCccHHHHHHHHHc
Confidence            1          1 56789999999999999998899983   12222111 110 0000    01122378999999999


Q ss_pred             cCCCCCCCHHHHHHH
Q psy2787         160 KNPAERPKFSTLKDC  174 (251)
Q Consensus       160 ~dP~~Rps~~~il~~  174 (251)
                      .||++|.++++.++.
T Consensus       277 rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  277 RDPSKRLSAEDYLQK  291 (1431)
T ss_pred             cCchhccCHHHHHHh
Confidence            999999999999976

>KOG1163|consensus

Probab=99.67  E-value=1.3e-16  Score=124.63  Aligned_cols=160  Identities=16%  Similarity=0.192  Sum_probs=124.1

Q ss_pred             CchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccCCCc------eeecCCCCcCcccCCCcccCCC
Q psy2787          23 LPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQNDC------YVMTERKPLPCPWCPMESLKHN   95 (251)
Q Consensus        23 ~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~   95 (251)
                      ..|++.-++|+|.+++|||||||+|+++-++.. ..+.++|||+|+.+.+..      +.......||.+|++-....+.
T Consensus       117 aDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~  196 (341)
T KOG1163|consen  117 ADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGI  196 (341)
T ss_pred             HHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhh
Confidence            456678899999999999999999943333322 368899999999854332      3344567899999998887777


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCCh---hHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHHhccCCCCCCCHH
Q psy2787          96 QFSQASDAWMFGVTIWEMFTFGAEPWVGLNG---MQILQKIDREGERLPRP---EACPVEVYALMRQCWSKNPAERPKFS  169 (251)
Q Consensus        96 ~~~~~~Di~S~G~il~el~~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~---~~~~~~~~~li~~cl~~dP~~Rps~~  169 (251)
                      ..+...|+=|+|.++.++.. |..||++...   .+-+++|.......++.   ...|.++...+.-|-..--++-|+..
T Consensus       197 eqSRRDDmeSvgYvLmYfnr-G~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~  275 (341)
T KOG1163|consen  197 EQSRRDDMESVGYVLMYFNR-GSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM  275 (341)
T ss_pred             hhhhhhhhhhhcceeeeeec-CCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence            78899999999999999998 9999998654   34455665554444432   67899999999999999999999999


Q ss_pred             HHHHHHHhhcHHHH
Q psy2787         170 TLKDCLYRLTPAVM  183 (251)
Q Consensus       170 ~il~~l~~~~~~~~  183 (251)
                      .+.+.+..+.....
T Consensus       276 ylrqlFriLfr~ln  289 (341)
T KOG1163|consen  276 YLRQLFRILFRTLN  289 (341)
T ss_pred             HHHHHHHHHHhhcc
Confidence            88887776665443

>KOG1165|consensus

Probab=99.66  E-value=3.5e-16  Score=127.28  Aligned_cols=158  Identities=15%  Similarity=0.191  Sum_probs=127.2

Q ss_pred             chhhHHhhhhhhCCcccCCCCCCCceEEEccCC-----ceEEccCCCCcccCCCc------eeecCCCCcCcccCCCccc
Q psy2787          24 PPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-----SSSSGDFGMMRYSQNDC------YVMTERKPLPCPWCPMESL   92 (251)
Q Consensus        24 ~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-----~~kl~DFGla~~~~~~~------~~~~~~~~~~~~y~aPE~~   92 (251)
                      .|++.-++|+|++.+|.|||||+|  .|+...+     .+.++|||+|+.+.++.      +....+..||.+||+....
T Consensus       131 ~Qmi~rie~vH~k~LIYRDIKPdN--FLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTH  208 (449)
T KOG1165|consen  131 KQMITRIEYVHEKDLIYRDIKPDN--FLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTH  208 (449)
T ss_pred             HHHHHHHHHHHhcceeecccCccc--eeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeecc
Confidence            355577999999999999999999  7776544     57899999999866554      3455678899999999998


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---hhHHHHHHHhcCCCCCCC---CCCcHHHHHHHHHHhccCCCCCC
Q psy2787          93 KHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN---GMQILQKIDREGERLPRP---EACPVEVYALMRQCWSKNPAERP  166 (251)
Q Consensus        93 ~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~---~~~~~~~i~~~~~~~~~~---~~~~~~~~~li~~cl~~dP~~Rp  166 (251)
                      .+...+...|+=|+|-++.+.+. |.+||.|..   ..+-+++|-..+...++.   .++|.++..-+.-.-..+-.+-|
T Consensus       209 lGrEQSRRDDLEaLGHvFmYFLR-GsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~P  287 (449)
T KOG1165|consen  209 LGREQSRRDDLEALGHVFMYFLR-GSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETP  287 (449)
T ss_pred             ccchhhhhhhHHHhhhhhhhhcc-CCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCC
Confidence            89999999999999999999999 999999864   455666664444333332   67888999999888888999999


Q ss_pred             CHHHHHHHHHhhcHHHHH
Q psy2787         167 KFSTLKDCLYRLTPAVMK  184 (251)
Q Consensus       167 s~~~il~~l~~~~~~~~~  184 (251)
                      +.+.+...+..+......
T Consensus       288 DYdylr~Lf~dvldr~g~  305 (449)
T KOG1165|consen  288 DYDYLRKLFDDVLDRLGE  305 (449)
T ss_pred             CHHHHHHHHHHHHHhcCC
Confidence            999888877776655443

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.53  E-value=2.4e-15  Score=127.92  Aligned_cols=92  Identities=8%  Similarity=-0.034  Sum_probs=70.5

Q ss_pred             CcccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCC-CCCCceEEEccCCceEEccCCCCcccCCCce-----
Q psy2787           1 MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQF-SSSSLLILFFSSSSSSSGDFGMMRYSQNDCY-----   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdl-kp~ni~il~~~~~~~kl~DFGla~~~~~~~~-----   74 (251)
                      |.+||++.++|..........++.++++||.|||++||+|||| ||+|  |+++.++.+||+|||+|+.......     
T Consensus        95 LVmE~~~G~~L~~~~~~~~~~~~~~i~~aL~~lH~~gIiHrDL~KP~N--ILv~~~~~ikLiDFGlA~~~~~~~~~~~~~  172 (365)
T PRK09188         95 LVRGWTEGVPLHLARPHGDPAWFRSAHRALRDLHRAGITHNDLAKPQN--WLMGPDGEAAVIDFQLASVFRRRGALYRIA  172 (365)
T ss_pred             EEEEccCCCCHHHhCccchHHHHHHHHHHHHHHHHCCCeeCCCCCcce--EEEcCCCCEEEEECccceecccCcchhhhh
Confidence            4689998888864322122357788899999999999999999 9999  9999899999999999997543221     


Q ss_pred             --eecCCCCcCcccCCCcccCC
Q psy2787          75 --VMTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        75 --~~~~~~~~~~~y~aPE~~~~   94 (251)
                        .......+++.|+|||++..
T Consensus       173 ~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        173 AYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             hhhhhhhhhccCccCCcccCCh
Confidence              11134567788999999874

>KOG0590|consensus

Probab=99.48  E-value=5.4e-15  Score=133.54  Aligned_cols=176  Identities=17%  Similarity=0.213  Sum_probs=134.3

Q ss_pred             CcccccchhHHHHHh-cC--------CCCCCCchhhHHhhhhh-hCCcccCCCCCCCceEEEccCC-ceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENY-TE--------PCRKPLPPERRGYGTFS-VNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~-~~--------~~~~~~~~~~~gl~~lH-~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~   69 (251)
                      +++||++.+++.+.. ..        ....++.|+..|+.|+| ..++.|||+||+|  .+++.++ ..|++|||+|..+
T Consensus        98 ~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n--~~l~~s~~~l~~~df~~At~~  175 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSN--SLLDESGSALKIADFGLATAY  175 (601)
T ss_pred             cccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCcc--chhccCCCcccCCCchhhccc
Confidence            357788888888766 32        34678899999999999 9999999999999  9999999 9999999999874


Q ss_pred             CC--CceeecCCCCc-CcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHH-HHHHhcCCC--CCC
Q psy2787          70 QN--DCYVMTERKPL-PCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQIL-QKIDREGER--LPR  142 (251)
Q Consensus        70 ~~--~~~~~~~~~~~-~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~-~~i~~~~~~--~~~  142 (251)
                      ..  ..........| ++.|+|||...+. ......|+||.|+++..+++ |..||......... .........  ...
T Consensus       176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  254 (601)
T KOG0590|consen  176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLT-GELPWDFPSRKDGRYSSWKSNKGRFTQLP  254 (601)
T ss_pred             cccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccccccccc-CCCCccccccccccceeecccccccccCc
Confidence            43  33334445566 8899999999874 34678999999999999999 99999765433211 111111111  233


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ....+....+++.+++..+|..|.+.+++...-+...
T Consensus       255 ~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  255 WNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cccCChhhhhcccccccCCchhccccccccccccccc
Confidence            3567788899999999999999999998877655544

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.48  E-value=1.1e-14  Score=113.75  Aligned_cols=119  Identities=8%  Similarity=-0.030  Sum_probs=82.2

Q ss_pred             cccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCC-CCCCceEEEccCCceEEccCCCCcccCCCcee----e
Q psy2787           2 SANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQF-SSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV----M   76 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdl-kp~ni~il~~~~~~~kl~DFGla~~~~~~~~~----~   76 (251)
                      .+||....+|..........++.|+..+|+++|++||+|||| ||+|  |+++.++.++|+|||++.........    .
T Consensus        76 vmeyI~G~~L~~~~~~~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~N--ILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~  153 (218)
T PRK12274         76 DRSYLAGAAMYQRPPRGDLAYFRAARRLLQQLHRCGVAHNDLAKEAN--WLVQEDGSPAVIDFQLAVRGNPRARWMRLLA  153 (218)
T ss_pred             EEeeecCccHHhhhhhhhHHHHHHHHHHHHHHHHCcCccCCCCCcce--EEEcCCCCEEEEECCCceecCCcchHHHHHH
Confidence            467777666655432222245678889999999999999999 7999  99999999999999999864332210    0


Q ss_pred             --------cCCCCcCcccCCCcccCCC-CCC-chhHHHHHHHHHHHHHhCCCCCCCC
Q psy2787          77 --------TERKPLPCPWCPMESLKHN-QFS-QASDAWMFGVTIWEMFTFGAEPWVG  123 (251)
Q Consensus        77 --------~~~~~~~~~y~aPE~~~~~-~~~-~~~Di~S~G~il~el~~~g~~pf~~  123 (251)
                              ......++.|++|+...-. ..+ ...+.++.|+-+|.++| +..+..+
T Consensus       154 ~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~-~~~~~~~  209 (218)
T PRK12274        154 REDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVT-RRVLHWE  209 (218)
T ss_pred             HHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHh-ccCCccc
Confidence                    1112345556666543322 233 45678889999999999 7766644

>KOG1290|consensus

Probab=99.42  E-value=1.5e-13  Score=116.96  Aligned_cols=117  Identities=15%  Similarity=0.177  Sum_probs=81.8

Q ss_pred             ceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-------CChhHH
Q psy2787          57 SSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVG-------LNGMQI  129 (251)
Q Consensus        57 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~-------~~~~~~  129 (251)
                      .+||+|||-|.-....    .+.-..|..|.|||++.+..|+..+||||++|++||++| |-.-|..       .+...+
T Consensus       392 ~vKIaDlGNACW~~kh----FT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaT-GDyLFePhsG~~Y~rDEDHi  466 (590)
T KOG1290|consen  392 RVKIADLGNACWVHKH----FTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELAT-GDYLFEPHSGENYSRDEDHI  466 (590)
T ss_pred             eEEEeeccchhhhhhh----hchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhc-CceeecCCCCCCCCccHHHH
Confidence            4899999988754332    223345667999999999999999999999999999999 9887732       122222


Q ss_pred             HHHHHh----------cCCC----------------CCC-------------CCCCcHHHHHHHHHHhccCCCCCCCHHH
Q psy2787         130 LQKIDR----------EGER----------------LPR-------------PEACPVEVYALMRQCWSKNPAERPKFST  170 (251)
Q Consensus       130 ~~~i~~----------~~~~----------------~~~-------------~~~~~~~~~~li~~cl~~dP~~Rps~~~  170 (251)
                      ...+.-          .+..                +..             +..-..++.+++.-||+.+|++|||+.+
T Consensus       467 A~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~  546 (590)
T KOG1290|consen  467 ALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQ  546 (590)
T ss_pred             HHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHH
Confidence            221111          1100                000             1112236778999999999999999999


Q ss_pred             HHHHHHhh
Q psy2787         171 LKDCLYRL  178 (251)
Q Consensus       171 il~~l~~~  178 (251)
                      +++|.|-.
T Consensus       547 cl~hPwLn  554 (590)
T KOG1290|consen  547 CLKHPWLN  554 (590)
T ss_pred             HhcCcccc
Confidence            99998754

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.38  E-value=2.5e-14  Score=113.90  Aligned_cols=98  Identities=6%  Similarity=-0.037  Sum_probs=71.1

Q ss_pred             CcccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCC
Q psy2787           1 MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERK   80 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~   80 (251)
                      |.|||++..+|.+... .....+.++..++..+|..|++|||++|+|  ++++.++ ++++|||.......+....    
T Consensus       120 lvmEyi~G~tL~~~~~-~~~~~~~~i~~~l~~lH~~gi~H~Dikp~N--ili~~~g-i~liDfg~~~~~~e~~a~d----  191 (232)
T PRK10359        120 MLIEYIEGVELNDMPE-ISEDVKAKIKASIESLHQHGMVSGDPHKGN--FIVSKNG-LRIIDLSGKRCTAQRKAKD----  191 (232)
T ss_pred             EEEEEECCccHHHhhh-ccHHHHHHHHHHHHHHHHcCCccCCCChHH--EEEeCCC-EEEEECCCcccccchhhHH----
Confidence            4688999888766532 112345688899999999999999999999  8888888 9999999886543221110    


Q ss_pred             CcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHh
Q psy2787          81 PLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT  115 (251)
Q Consensus        81 ~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~  115 (251)
                               .++....+..++|+||||+++.....
T Consensus       192 ---------~~vler~y~~~~di~~lg~~~~~~~~  217 (232)
T PRK10359        192 ---------RIDLERHYGIKNEIKDLGYYLLIYKK  217 (232)
T ss_pred             ---------HHHHHhHhcccccccceeEeehHHHH
Confidence                     02333446678999999998776543

>KOG1166|consensus

Probab=99.20  E-value=8.2e-11  Score=109.70  Aligned_cols=164  Identities=12%  Similarity=0.074  Sum_probs=110.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc-------cCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF-------SSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~-------~~~~~kl~DFGla   66 (251)
                      +..||.+-|+|++.....       +-.+..|+++-+++||..+|||+||||+|  .++.       .+..++|+|||.+
T Consensus       771 lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDN--fll~~~~~~~~~~~~l~lIDfG~s  848 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDN--FLLRREICADSDSKGLYLIDFGRS  848 (974)
T ss_pred             eeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcce--eEeecccCCCCcccceEEEecccc
Confidence            357899999999865422       33566778899999999999999999999  4442       2336899999998


Q ss_pred             cccC--CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q psy2787          67 RYSQ--NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE  144 (251)
Q Consensus        67 ~~~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  144 (251)
                      ..+.  .+. ........|-.+-++|...|..++.+.|-|.++.+++-|+. |+.       .   + + ..+.......
T Consensus       849 iDm~lfp~~-~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLF-G~y-------~---q-~-~~g~~~~~~~  914 (974)
T KOG1166|consen  849 IDMKLFPDG-TKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLF-GKY-------M---E-V-KNGSSWMVKT  914 (974)
T ss_pred             eeeeEcCCC-cEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHH-HHH-------H---H-h-cCCcceeccc
Confidence            7532  111 23344566777999999999999999999999999999999 653       1   1 1 2233332222


Q ss_pred             CCc----HHH-HHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         145 ACP----VEV-YALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       145 ~~~----~~~-~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +++    .++ .++...+|..|-..=|...++...++....
T Consensus       915 ~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~  955 (974)
T KOG1166|consen  915 NFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLA  955 (974)
T ss_pred             cchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHH
Confidence            222    222 245566666444333666666666555443

>KOG0606|consensus

Probab=99.18  E-value=3.8e-11  Score=110.81  Aligned_cols=165  Identities=18%  Similarity=0.246  Sum_probs=129.4

Q ss_pred             cccccchhHHHHHhc-------CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC----
Q psy2787           2 SANFAELNAFQENYT-------EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ----   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~-------~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~----   70 (251)
                      +.+|+..++|..+++       ++.+-++..+..++++||+..+.|||++|.|  .+...++..+++|||......    
T Consensus       882 ~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~--~l~~~~gh~~l~~~~t~~~vg~~~p  959 (1205)
T KOG0606|consen  882 VGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDS--LLIAYDGHRPLTDFGTLSKVGLIPP  959 (1205)
T ss_pred             hhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccc--hhhcccCCcccCccccccccccccC
Confidence            345555566666533       2455677788899999999999999999999  999999999999998433210    


Q ss_pred             --CC------------------------ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy2787          71 --ND------------------------CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL  124 (251)
Q Consensus        71 --~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~  124 (251)
                        +.                        .........+|+.|.+||...+......+|.|++|++++|.++ |..||...
T Consensus       960 ~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~-g~pp~na~ 1038 (1205)
T KOG0606|consen  960 TTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLT-GIPPFNAE 1038 (1205)
T ss_pred             cCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhc-CCCCCCCc
Confidence              00                        0012334678999999999999888999999999999999999 99999999


Q ss_pred             ChhHHHHHHHhcCCCCCC-CCCCcHHHHHHHHHHhccCCCCCCCHH
Q psy2787         125 NGMQILQKIDREGERLPR-PEACPVEVYALMRQCWSKNPAERPKFS  169 (251)
Q Consensus       125 ~~~~~~~~i~~~~~~~~~-~~~~~~~~~~li~~cl~~dP~~Rps~~  169 (251)
                      ..+++++.+.......+. +...+.+.++++...+..+|.+|..+.
T Consensus      1039 tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1039 TPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             chhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence            999988887655444432 345778899999999999999998766

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.15  E-value=4.5e-12  Score=99.08  Aligned_cols=66  Identities=8%  Similarity=0.038  Sum_probs=49.7

Q ss_pred             CcccccchhHHHHHh-cC------CCCCCCchhhHHhhhh-hhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENY-TE------PCRKPLPPERRGYGTF-SVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~-~~------~~~~~~~~~~~gl~~l-H~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      |.|||++.+++.... ..      ....++.|++.+|.++ |+.||+||||||+|  |+++ ++.++|+|||+|...
T Consensus        94 iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~N--Ili~-~~~v~LiDFG~a~~~  167 (190)
T cd05147          94 LVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYN--LLYH-DGKLYIIDVSQSVEH  167 (190)
T ss_pred             EEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH--EEEE-CCcEEEEEccccccC
Confidence            468888876554321 11      1223456778999999 79999999999999  8887 478999999998754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.12  E-value=2.2e-11  Score=95.31  Aligned_cols=68  Identities=7%  Similarity=0.033  Sum_probs=51.5

Q ss_pred             CcccccchhHHHHH-hcC------CCCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQEN-YTE------PCRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~-~~~------~~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |.+||++.+.+... ..+      ....++.+++.++.++|+ +||+||||||+|  |+++ ++.++|+|||++.....
T Consensus        94 lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~N--Ill~-~~~~~liDFG~a~~~~~  169 (190)
T cd05145          94 LVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYN--ILYH-DGKPYIIDVSQAVELDH  169 (190)
T ss_pred             EEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhh--EEEE-CCCEEEEEcccceecCC
Confidence            46888877643221 111      123456778899999999 999999999999  8887 78999999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.05  E-value=5.1e-11  Score=93.78  Aligned_cols=69  Identities=12%  Similarity=-0.019  Sum_probs=56.0

Q ss_pred             CcccccchhHHHHHhc-CCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYT-EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~-~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |.+||.+.+++..... ......+.++..++.++|..||+||||+|+|  |+++.++.++|+|||.+.....
T Consensus       108 lv~e~~~g~~L~~~~~~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~N--ill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         108 VVMEYIDGVELYRVRVLEDPEEVLDEILEEIVKAYKHGIIHGDLSEFN--ILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             EEEEEeCCcchhhccccccHHHHHHHHHHHHHHHHHCCCCcCCCCccc--EEEcCCCcEEEEECCccccCCC
Confidence            4578888877766543 3344567788899999999999999999999  9999999999999999865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG1266|consensus

Probab=99.04  E-value=1.2e-10  Score=95.41  Aligned_cols=168  Identities=12%  Similarity=0.049  Sum_probs=108.1

Q ss_pred             ccccchhHHHHHhcC-----------CCCCCCchhhHHhhhhhhC--CcccCCCCCCCceEEEccCCceEEccCCCCcc-
Q psy2787           3 ANFAELNAFQENYTE-----------PCRKPLPPERRGYGTFSVN--NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY-   68 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~-----------~~~~~~~~~~~gl~~lH~~--~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~-   68 (251)
                      .||+.-|++-.+++.           ..+++..|++.||.|||+.  .|+|+++....  |++..+|.+|++--.-... 
T Consensus       151 teymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~t--ifiq~ngLIkig~~ap~s~h  228 (458)
T KOG1266|consen  151 TEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDT--IFIQHNGLIKIGSVAPDSTH  228 (458)
T ss_pred             EecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhh--eeecCCceEEecccCccccc
Confidence            466666665554332           2356788999999999997  59999999999  8889999998864211111 


Q ss_pred             --cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCC-CCCCCChhHHHHHHHhcCCCCCCCCC
Q psy2787          69 --SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE-PWVGLNGMQILQKIDREGERLPRPEA  145 (251)
Q Consensus        69 --~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~-pf~~~~~~~~~~~i~~~~~~~~~~~~  145 (251)
                        .............+.++|.+||+=.....+.++|||+||+...+|.. +.. |-.+.+....-..+...-....  . 
T Consensus       229 ~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai-lEiq~tnseS~~~~ee~ia~~i~~le--n-  304 (458)
T KOG1266|consen  229 PSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI-LEIQSTNSESKVEVEENIANVIIGLE--N-  304 (458)
T ss_pred             hhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH-heeccCCCcceeehhhhhhhheeecc--C-
Confidence              11111112233445667999998666666789999999999999988 554 3444332221111111000000  0 


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                        .--+.++.+|+...|..||++.+++.|.-.+
T Consensus       305 --~lqr~~i~kcl~~eP~~rp~ar~llfHpllf  335 (458)
T KOG1266|consen  305 --GLQRGSITKCLEGEPNGRPDARLLLFHPLLF  335 (458)
T ss_pred             --ccccCcCcccccCCCCCCcchhhhhcCceee
Confidence              0124578899999999999999998875433

>KOG0601|consensus

Probab=99.03  E-value=2.2e-10  Score=100.24  Aligned_cols=140  Identities=21%  Similarity=0.230  Sum_probs=100.6

Q ss_pred             HhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccCCCcee----ecCCCCcCcccCCCcccCCCCCCchhHH
Q psy2787          29 GYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQNDCYV----MTERKPLPCPWCPMESLKHNQFSQASDA  103 (251)
Q Consensus        29 gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di  103 (251)
                      ||.++|+.+|+|-|+||.|  |++..+ ..++++|||+...+......    ......+...|++||..++. ++..+|+
T Consensus       234 al~~~hs~~~~~~~~kp~~--i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di  310 (524)
T KOG0601|consen  234 ALSHLHSNNIVHDDLKPAN--IFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL-ATFASDI  310 (524)
T ss_pred             cccccCCCcccccccchhh--eecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc-cchHhhh
Confidence            9999999999999999999  999998 78999999998876554321    11222566679999998764 6889999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         104 WMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       104 ~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      |++|.++.+..+ +..+....-.....+ + +.+ .........+.++...+.++++.+|-.|++++.+..+
T Consensus       311 ~sl~ev~l~~~l-~~~~~~~g~~~~W~~-~-r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l  379 (524)
T KOG0601|consen  311 FSLGEVILEAIL-GSHLPSVGKNSSWSQ-L-RQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL  379 (524)
T ss_pred             cchhhhhHhhHh-hcccccCCCCCCccc-c-ccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence            999999999988 665443221111111 0 111 1112223455677779999999999999998877654

>KOG2137|consensus

Probab=99.01  E-value=1.3e-10  Score=103.34  Aligned_cols=145  Identities=13%  Similarity=0.141  Sum_probs=104.8

Q ss_pred             hHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee--------ecCCCCcCcccCCCcccCCCCC
Q psy2787          27 RRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV--------MTERKPLPCPWCPMESLKHNQF   97 (251)
Q Consensus        27 ~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~   97 (251)
                      ..|+.|+|. .++||++|.|++  |.++.++.+|++.|+++.....+...        ..........|.|||++.+...
T Consensus       109 ~dgl~flh~sAk~VH~ni~p~~--i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~  186 (700)
T KOG2137|consen  109 ADGLAFLHRSAKVVHGNIQPEA--IVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTN  186 (700)
T ss_pred             cchhhhhccCcceeecccchhh--eeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhccccc
Confidence            478999996 579999999999  99999999999999988764432111        0111223446999999999888


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHH--HhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKI--DREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKD  173 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i--~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~  173 (251)
                      +.++|+||+|+++|.+...|+.-+........+...  ...-........+|+++++-+.+++..++.-||++..+..
T Consensus       187 ~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~  264 (700)
T KOG2137|consen  187 TPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLS  264 (700)
T ss_pred             cccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhhc
Confidence            899999999999999996355555443222222111  1111222334678999999999999999999997766654

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.99  E-value=1.6e-10  Score=93.64  Aligned_cols=65  Identities=11%  Similarity=0.014  Sum_probs=50.6

Q ss_pred             cccccch-hHHHHHhcCC--CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           2 SANFAEL-NAFQENYTEP--CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         2 ~~e~~~l-~~l~~~~~~~--~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .+|+.+. .+|.+.+...  ....+.+++.++.+||++||+||||||.|  ||++.++.++|+|||.+..
T Consensus       124 V~e~l~G~~~L~~~l~~~~l~~~~~~~i~~~l~~lH~~GI~HrDlkp~N--ILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        124 LIERIEGARDLVALLQEAPLSEEQWQAIGQLIARFHDAGVYHADLNAHN--ILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             EEEecCCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHCCCCCCCCCchh--EEEcCCCCEEEEECCCccc
Confidence            4566665 4665554332  12235678899999999999999999999  9999888999999998865

>PRK10345 hypothetical protein; Provisional

Probab=98.94  E-value=3.9e-10  Score=89.27  Aligned_cols=63  Identities=14%  Similarity=-0.017  Sum_probs=46.4

Q ss_pred             cccc--cchhHHHHHhcCCCC----CCCchhhHHh-hhhhhCCcccCCCCCCCceEEEcc----CCceEEccCCCC
Q psy2787           2 SANF--AELNAFQENYTEPCR----KPLPPERRGY-GTFSVNNICSCQFSSSSLLILFFS----SSSSSSGDFGMM   66 (251)
Q Consensus         2 ~~e~--~~l~~l~~~~~~~~~----~~~~~~~~gl-~~lH~~~iiHrdlkp~ni~il~~~----~~~~kl~DFGla   66 (251)
                      ++||  +..++|.+.+.+...    ..+.+++.++ +|||+++|+||||||+|  |+++.    ++.++|+||+.+
T Consensus        83 I~e~~G~~~~tL~~~l~~~~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlKp~N--ILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQCRYEEDVAQLRQLLKKLKRYLLDNRIVTMELKPQN--ILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EecCCCCcchhHHHHHHcccccHhHHHHHHHHHHHHHHHHHCCEeecCCCHHH--EEEeccCCCCCcEEEEECCCC
Confidence            4678  557888887754321    1245666777 99999999999999999  88864    347999995544

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.92  E-value=3.3e-10  Score=89.06  Aligned_cols=65  Identities=18%  Similarity=0.240  Sum_probs=54.6

Q ss_pred             CcccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      |.+||++.+++.+.........+.+++.+|.+||+.+++|+|++|.|  |+++ ++.+++.|||++..
T Consensus        74 lv~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi~H~Dl~~~N--il~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        74 IVMEYIEGKPLKDVIEEGNDELLREIGRLVGKLHKAGIVHGDLTTSN--IIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             EEEEEECCccHHHHHhhcHHHHHHHHHHHHHHHHHCCeecCCCCcce--EEEE-CCcEEEEECCCCcC
Confidence            46789988888876544222578888999999999999999999999  8888 78999999999865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>smart00090 RIO RIO-like kinase

Probab=98.90  E-value=3.2e-10  Score=91.66  Aligned_cols=68  Identities=7%  Similarity=-0.033  Sum_probs=51.6

Q ss_pred             CcccccchhHHHHHhc-CC------CCCCCchhhHHhhhhhhCC-cccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYT-EP------CRKPLPPERRGYGTFSVNN-ICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~-~~------~~~~~~~~~~gl~~lH~~~-iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +++||++..++..... ..      ...++.+++.++++||++| |+||||||+|  |+++ ++.++|+|||.+.....
T Consensus       125 lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N--Ili~-~~~i~LiDFg~a~~~~~  200 (237)
T smart00090      125 LVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN--ILVH-DGKVVIIDVSQSVELDH  200 (237)
T ss_pred             EEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh--EEEE-CCCEEEEEChhhhccCC
Confidence            3567777766644321 11      1246678889999999999 9999999999  8887 78899999998875433

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.89  E-value=2.8e-10  Score=102.73  Aligned_cols=64  Identities=9%  Similarity=0.135  Sum_probs=54.5

Q ss_pred             CcccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      +.+||++.++|.+... .....+.+++.+|.+||+.+|+||||||+|  |++ .++.++|+|||+++.
T Consensus       413 lv~E~~~g~~L~~~l~-~~~~~~~~i~~~L~~lH~~giiHrDlkp~N--ILl-~~~~~~liDFGla~~  476 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE-GNPELVRKVGEIVAKLHKAGIVHGDLTTSN--FIV-RDDRLYLIDFGLGKY  476 (535)
T ss_pred             EEEEecCCCcHHHHHH-HHHHHHHHHHHHHHHHHhCCCccCCCChHH--EEE-ECCcEEEEeCccccc
Confidence            4679999888888665 234577889999999999999999999999  777 578899999999875

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.86  E-value=8.8e-10  Score=87.40  Aligned_cols=65  Identities=12%  Similarity=0.175  Sum_probs=53.3

Q ss_pred             CcccccchhHHHHHhcCCC---CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPC---RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      +.+||.+.++|.+......   ...+.+++.+|.++|+.+++|+|++|.|  |+++ ++.++|+|||++..
T Consensus        76 lv~e~~~G~~L~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~N--il~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         76 IVMEYIEGEPLKDLINSNGMEELELSREIGRLVGKLHSAGIIHGDLTTSN--MILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             EEEEEeCCcCHHHHHHhccHHHHHHHHHHHHHHHHHHhCCcccCCCCccc--EEEE-CCCEEEEECCcccC
Confidence            3578888888877654422   2567788899999999999999999999  8888 78899999998864

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.85  E-value=7.7e-10  Score=86.05  Aligned_cols=66  Identities=9%  Similarity=-0.087  Sum_probs=51.0

Q ss_pred             cccccch-----hHHHHHhc-CCCCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAEL-----NAFQENYT-EPCRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l-----~~l~~~~~-~~~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .+||.+.     ..+.+... ......+.+++.++.++|. .+|+||||||+|  |+++ ++.++++|||.+....
T Consensus        93 v~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~N--ili~-~~~~~liDfg~a~~~~  165 (187)
T cd05119          93 VMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYREAGLVHGDLSEYN--ILVD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             EEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhccCcCcCCCChhh--EEEE-CCcEEEEECccccccc
Confidence            4566666     33333322 3445677788899999999 999999999999  8888 8899999999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.56  E-value=8e-07  Score=75.78  Aligned_cols=157  Identities=18%  Similarity=0.209  Sum_probs=106.9

Q ss_pred             CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccC-----CCCC
Q psy2787          23 LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLK-----HNQF   97 (251)
Q Consensus        23 ~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~~~~   97 (251)
                      .++++.+.+.||..|-.-+|+.++|  +|+++.+.+.|.|-..-..-.++  .......|...|.+||.-.     +..-
T Consensus       123 aRnlA~aFA~lH~~Gh~vGDVn~~~--~lVsd~~~V~LVdsDsfqi~~ng--~~~~cpVg~~eftPPElQ~~~sf~g~~r  198 (637)
T COG4248         123 ARNLASAFATLHEHGHVVGDVNQNS--FLVSDDSKVVLVDSDSFQINANG--TLHLCPVGVSEFTPPELQTLPSFVGFER  198 (637)
T ss_pred             HHHHHHHHHHHHhcCCcccccCccc--eeeecCceEEEEcccceeeccCC--ceEecccCccccCCHHHhccccccccCC
Confidence            3456678999999999999999999  99999998888874432222222  1233456777899999755     2234


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCCh----hHHHH-HHH----------hcCCCCCC----CCCCcHHHHHHHHHHh
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNG----MQILQ-KID----------REGERLPR----PEACPVEVYALMRQCW  158 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~----~~~~~-~i~----------~~~~~~~~----~~~~~~~~~~li~~cl  158 (251)
                      +..+|.|.+|+++++++.+|+.||.|...    ..-.+ .|.          ..+..++.    ...+++.+..+..+|+
T Consensus       199 ~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF  278 (637)
T COG4248         199 TANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAF  278 (637)
T ss_pred             CccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHh
Confidence            57799999999999999967999976321    00011 110          01111110    1347789999999999


Q ss_pred             ccC--CCCCCCHHHHHHHHHhhcHHHH
Q psy2787         159 SKN--PAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       159 ~~d--P~~Rps~~~il~~l~~~~~~~~  183 (251)
                      ..-  +.-|||++.-+..|..+.....
T Consensus       279 ~~~~~~~~RP~a~aW~aAl~al~~~L~  305 (637)
T COG4248         279 TESGVATPRPTAKAWVAALDALRQQLK  305 (637)
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence            643  5689999888777776665544

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.52  E-value=5.8e-08  Score=74.00  Aligned_cols=64  Identities=17%  Similarity=0.223  Sum_probs=52.5

Q ss_pred             cccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           2 SANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .|||.+...|.+........++..+-.-+.-||.+||+|+||.++|  +++...+ +.++|||++..
T Consensus        77 ~me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~givHGDLTtsN--iIl~~~~-i~~IDfGLg~~  140 (204)
T COG3642          77 VMEYIEGELLKDALEEARPDLLREVGRLVGKLHKAGIVHGDLTTSN--IILSGGR-IYFIDFGLGEF  140 (204)
T ss_pred             EEEEeCChhHHHHHHhcchHHHHHHHHHHHHHHhcCeecCCCccce--EEEeCCc-EEEEECCcccc
Confidence            5788887777777776655567777778899999999999999999  8877655 78999999875

>KOG0601|consensus

Probab=98.50  E-value=7.2e-08  Score=84.73  Aligned_cols=149  Identities=16%  Similarity=0.136  Sum_probs=102.9

Q ss_pred             cCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccCCCceeecCCCCcCcccC--CCccc
Q psy2787          16 TEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQNDCYVMTERKPLPCPWC--PMESL   92 (251)
Q Consensus        16 ~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~--aPE~~   92 (251)
                      .+...++..|+..++.++|+..++|+|+||+|  |++..+ +..+++|||+...+.-    ........-+++  ++...
T Consensus       365 ~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psn--i~i~~~~~~~~~~~~~~~t~~~~----~~~~~~~~~r~~p~~~~~~  438 (524)
T KOG0601|consen  365 EDPRLRLTAQILTALNVIHSKLFVHLDVKPSN--ILISNDGFFSKLGDFGCWTRLAF----SSGVFHHIDRLYPIAEILL  438 (524)
T ss_pred             cchhhhhHHHHHhccccccchhhhcccccccc--eeeccchhhhhccccccccccce----ecccccccccccccchhhc
Confidence            34566788899999999999999999999999  777765 7889999998864211    111122222233  55555


Q ss_pred             CCCCCCchhHHHHHHHHHHHHHhCCCC-CCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHH
Q psy2787          93 KHNQFSQASDAWMFGVTIWEMFTFGAE-PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL  171 (251)
Q Consensus        93 ~~~~~~~~~Di~S~G~il~el~~~g~~-pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~i  171 (251)
                      ....+..+.|+||||..+.+.++ |.. ++.+...    ..+ ..+ ..+........+..+...+...++..||.+.++
T Consensus       439 e~~~~~~~~~~~sl~~~~~e~~~-~~~ls~~~~~~----~~i-~~~-~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l  511 (524)
T KOG0601|consen  439 EDYPHLSKADIFSLGLSVDEAIT-GSPLSESGVQS----LTI-RSG-DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVEL  511 (524)
T ss_pred             ccccccccccccccccccccccc-CcccCcccccc----eee-ecc-cccCCCchHHhhhhhhhhhcCCccccchhhhhh
Confidence            56677889999999999999998 543 3333221    111 122 222333444778888889999999999998887


Q ss_pred             HHHHHh
Q psy2787         172 KDCLYR  177 (251)
Q Consensus       172 l~~l~~  177 (251)
                      ..+...
T Consensus       512 ~~~~~~  517 (524)
T KOG0601|consen  512 SLHSEF  517 (524)
T ss_pred             cccchh
Confidence            765543

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.34  E-value=5.1e-08  Score=72.33  Aligned_cols=45  Identities=11%  Similarity=0.065  Sum_probs=39.1

Q ss_pred             CCchhhHHhhhhhhC---CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          22 PLPPERRGYGTFSVN---NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~---~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      ...++..+++++|..   +++|+|++|.|  |++++.+.+++.|||.+..
T Consensus        91 ~~~~~~~~l~~lh~~~~~~i~H~Dl~~~N--il~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          91 IAEQLAELLAKLHQLPLLVLCHGDLHPGN--ILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             HHHHHHHHHHHHhCCCceEEEecCCCcce--EEEECCcEEEEEecccccC
Confidence            456677889999985   69999999999  9998889999999998864

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.34  E-value=1.5e-07  Score=71.83  Aligned_cols=62  Identities=10%  Similarity=0.052  Sum_probs=46.1

Q ss_pred             cccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCc-----ccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787           2 SANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNI-----CSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~i-----iHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .+||.+...+... .......+.++.++|+.||..++     +|+|++|.|  |+++ ++.++++|||.+.
T Consensus        69 v~e~i~G~~l~~~-~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~N--il~~-~~~~~liDf~~a~  135 (170)
T cd05151          69 ITEFIEGSELLTE-DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGN--FLLD-DGRLWLIDWEYAG  135 (170)
T ss_pred             EEEecCCCccccc-cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCc--EEEE-CCeEEEEeccccc
Confidence            4566666655432 11122345678899999999985     999999999  8888 6679999999875

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.24  E-value=2.8e-07  Score=81.04  Aligned_cols=68  Identities=7%  Similarity=0.077  Sum_probs=50.0

Q ss_pred             CcccccchhHHHHHhcCC-----CCCCCchhhH-HhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-----CRKPLPPERR-GYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----~~~~~~~~~~-gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      |.+||++..++.+.....     ..+....+.. .+..+|..|++|+|++|.|  |+++.++.++++|||++....
T Consensus       235 LvmE~i~G~~L~~~~~~~~~~~~~~~ia~~~~~~~l~ql~~~g~~H~D~hPgN--ilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       235 LTMEWIDGIPLSDIAALDEAGLDRKALAENLARSFLNQVLRDGFFHADLHPGN--IFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             EEEEeECCcccccHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCceeCCCCccc--EEECCCCcEEEEeCCCeeECC
Confidence            468898887776543211     1112222333 4678899999999999999  999999999999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1243|consensus

Probab=98.16  E-value=1.2e-05  Score=72.23  Aligned_cols=89  Identities=16%  Similarity=0.159  Sum_probs=64.3

Q ss_pred             CchhhHHhhhhh-hCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          23 LPPERRGYGTFS-VNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        23 ~~~~~~gl~~lH-~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                      +.||+.||.||| ..+++|++|.-..  |+++..|..||++|.++........ .......-..|..|+.+....  -..
T Consensus       110 l~qIl~AL~FL~~d~~lvHgNv~~~S--VfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~s~--~s~  184 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCNLVHGNVCKDS--VFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDPSE--WSI  184 (690)
T ss_pred             HHHHHHHHHHHhccCCeeeccEeeee--EEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCccc--cch
Confidence            568889999997 6789999999999  9999999999999988765332211 111111222355565443222  346


Q ss_pred             HHHHHHHHHHHHHhCC
Q psy2787         102 DAWMFGVTIWEMFTFG  117 (251)
Q Consensus       102 Di~S~G~il~el~~~g  117 (251)
                      |.|-|||++||++. |
T Consensus       185 D~~~Lg~li~el~n-g  199 (690)
T KOG1243|consen  185 DSWGLGCLIEELFN-G  199 (690)
T ss_pred             hhhhHHHHHHHHhC-c
Confidence            99999999999999 7

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.04  E-value=3.3e-06  Score=66.02  Aligned_cols=47  Identities=9%  Similarity=-0.022  Sum_probs=38.8

Q ss_pred             CCchhhHHhhhh-hhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787          22 PLPPERRGYGTF-SVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus        22 ~~~~~~~gl~~l-H~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      .+.++..+|..+ |..||+|+||++.|  |++. ++.+.|+|||.+...+.
T Consensus       129 i~~~i~~~l~~l~H~~glVHGDLs~~N--IL~~-~~~v~iIDF~qav~~~h  176 (197)
T cd05146         129 AYYQVLSMMKQLYKECNLVHADLSEYN--MLWH-DGKVWFIDVSQSVEPTH  176 (197)
T ss_pred             HHHHHHHHHHHHHHhCCeecCCCCHHH--EEEE-CCcEEEEECCCceeCCC
Confidence            356777889988 89999999999999  8886 46789999998875443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.92  E-value=2.6e-06  Score=70.00  Aligned_cols=45  Identities=9%  Similarity=-0.077  Sum_probs=38.3

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-------CCceEEccCCCCc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-------SSSSSSGDFGMMR   67 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-------~~~~kl~DFGla~   67 (251)
                      .++.++...+.-||.+||+|+|++++|  |+++.       .+.+.++||+.+.
T Consensus       142 ~ll~~la~~i~~LH~~Gi~HgDL~~~N--iLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        142 MLIKRVATMVRDMHAAGINHRDCYICH--FLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHHHHHHHHCcCccCCCChhh--EEEeccccCCCCCceEEEEECCccc
Confidence            456677888999999999999999999  88864       4678999999775

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.85  E-value=4.6e-06  Score=64.83  Aligned_cols=47  Identities=19%  Similarity=0.055  Sum_probs=33.7

Q ss_pred             CCCchhhHHhhh-hhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787          21 KPLPPERRGYGT-FSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus        21 ~~~~~~~~gl~~-lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      ..+.++...+.. +|..||+|+||.+.|  |+++++ .+.++|||.+....
T Consensus       110 ~~~~~il~~~~~~~~~~givHGDLs~~N--Ilv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  110 ELLEEILEEIIKMLHKAGIVHGDLSEYN--ILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             HHHHHHHHHHHHHHHCTTEEESS-STTS--EEEETT-CEEE--GTTEEETT
T ss_pred             HHHHHHHHHHHHHHHhcCceecCCChhh--EEeecc-eEEEEecCcceecC
Confidence            345555564555 589999999999999  998877 89999999876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.83  E-value=8.6e-06  Score=64.46  Aligned_cols=48  Identities=21%  Similarity=0.154  Sum_probs=41.2

Q ss_pred             CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC---ceEEccCCCCcc
Q psy2787          19 CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS---SSSSGDFGMMRY   68 (251)
Q Consensus        19 ~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~---~~kl~DFGla~~   68 (251)
                      ...++.++...++-||.+||+|+|+++.|  ||++.++   .+.++||+.++.
T Consensus       120 ~~~ll~~l~~~i~~lH~~gi~H~Dl~~~N--ILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  120 RRELLRALARLIAKLHDAGIYHGDLNPSN--ILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHHHHHHHHHHHHHHCcCCCCCCCccc--EEEeCCCCceeEEEEcchhcee
Confidence            34567777888999999999999999999  8888776   789999997765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG3087|consensus

Probab=97.64  E-value=2.8e-05  Score=59.48  Aligned_cols=46  Identities=24%  Similarity=0.231  Sum_probs=36.7

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC---ceEEccCCCCccc
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS---SSSSGDFGMMRYS   69 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~---~~kl~DFGla~~~   69 (251)
                      +++.+-..+.-||.++|||+||..+|  |++..++   .+.++|||++...
T Consensus       118 ~~~~iG~~igklH~ndiiHGDLTTSN--ill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen  118 LARRIGELIGKLHDNDIIHGDLTTSN--ILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             HHHHHHHHHHHhhhCCeecccccccc--eEEecCCCcCceEEEeecchhcc
Confidence            44555577899999999999999999  7776554   4579999998753

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=97.56  E-value=4.7e-05  Score=68.40  Aligned_cols=69  Identities=7%  Similarity=-0.032  Sum_probs=46.5

Q ss_pred             CcccccchhHHHHHh--cCCC---CCCCchhh-HHhhhhhhCCcccCCCCCCCceEEEccCC----ceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENY--TEPC---RKPLPPER-RGYGTFSVNNICSCQFSSSSLLILFFSSS----SSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~--~~~~---~~~~~~~~-~gl~~lH~~~iiHrdlkp~ni~il~~~~~----~~kl~DFGla~~~~   70 (251)
                      |.|||++.+.+.+..  .+.-   ..+..... .-+..+...|++|+|++|.|  |+++.++    .+++.|||++...+
T Consensus       238 LvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~~GffHaDpHPGN--Ilv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        238 MVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFRDGFFHADMHPGN--IFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             EEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHhCCeeeCCCChHH--eEEecCCCCCCeEEEEecceEEECC
Confidence            468999988886531  1110   01111111 12444577899999999999  8888887    89999999988754


Q ss_pred             C
Q psy2787          71 N   71 (251)
Q Consensus        71 ~   71 (251)
                      .
T Consensus       316 ~  316 (537)
T PRK04750        316 K  316 (537)
T ss_pred             H
Confidence            3

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=97.32  E-value=7.6e-05  Score=59.08  Aligned_cols=64  Identities=6%  Similarity=-0.074  Sum_probs=45.1

Q ss_pred             CcccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      |.+||.+.-.+.+...-. ......+..++.-||+.|+.|+|..|.|  +++..++ +++.||+..+.
T Consensus       120 ll~EYIeG~~l~d~~~i~-e~~~~ki~~~ikqlH~~G~~HGD~hpgN--Flv~~~~-i~iID~~~k~~  183 (229)
T PF06176_consen  120 LLMEYIEGVELNDIEDID-EDLAEKIVEAIKQLHKHGFYHGDPHPGN--FLVSNNG-IRIIDTQGKRM  183 (229)
T ss_pred             EEEEEecCeecccchhcC-HHHHHHHHHHHHHHHHcCCccCCCCcCc--EEEECCc-EEEEECccccc
Confidence            356777766655432200 0122456788999999999999999999  7777544 88999987653

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>KOG1290|consensus

Probab=97.19  E-value=0.00017  Score=62.66  Aligned_cols=33  Identities=12%  Similarity=0.179  Sum_probs=27.1

Q ss_pred             CCCCchhhHHhhhhhhC-CcccCCCCCCCceEEEcc
Q psy2787          20 RKPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFS   54 (251)
Q Consensus        20 ~~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~   54 (251)
                      +.+.+|++.||.|||.. ||||-||||+|  ||+..
T Consensus       190 K~I~~qvL~GLdYLH~ecgIIHTDlKPEN--vLl~~  223 (590)
T KOG1290|consen  190 KEICRQVLTGLDYLHRECGIIHTDLKPEN--VLLCS  223 (590)
T ss_pred             HHHHHHHHHHHHHHHHhcCccccCCCcce--eeeec
Confidence            34567788999999975 99999999999  66643

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=96.98  E-value=0.00019  Score=58.29  Aligned_cols=63  Identities=13%  Similarity=-0.031  Sum_probs=45.2

Q ss_pred             cccccchhHHHHHh--cCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           2 SANFAELNAFQENY--TEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         2 ~~e~~~l~~l~~~~--~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      +|||.+...|....  ..+....+..++.-+..+-..||+|+|+++-|  |+++++|.+.++||--+
T Consensus       185 vMe~ieG~eL~~~r~~~en~~~il~~il~~~~~~~~~GiVHGDlSefN--IlV~~dg~~~vIDwPQ~  249 (304)
T COG0478         185 VMEYIEGVELYRLRLDVENPDEILDKILEEVRKAYRRGIVHGDLSEFN--ILVTEDGDIVVIDWPQA  249 (304)
T ss_pred             eeehcccceeecccCcccCHHHHHHHHHHHHHHHHHcCccccCCchhe--EEEecCCCEEEEeCccc
Confidence            46666665555443  33334445555555565668899999999999  99999999999999543

>PRK09902 hypothetical protein; Provisional

Probab=96.77  E-value=0.00077  Score=53.17  Aligned_cols=46  Identities=11%  Similarity=-0.051  Sum_probs=39.5

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc--eEEccCCCCcc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS--SSSGDFGMMRY   68 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~--~kl~DFGla~~   68 (251)
                      ..+.++...++-||..|+.|+|+-+.|  |+++..+.  ++++||.-++.
T Consensus       132 ~il~~va~~ia~LH~~Gv~Hgdly~kh--Ill~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        132 AMLKAVALAFKKMHSVNRQHGCCYVRH--IYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHHHHHHHHHHHHHCCCcCCCCCHhh--eeecCCCCeeEEEEEhhccch
Confidence            567778899999999999999999999  98876666  89999986654

>KOG3741|consensus

Probab=96.24  E-value=0.042  Score=48.85  Aligned_cols=126  Identities=16%  Similarity=0.116  Sum_probs=88.1

Q ss_pred             CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCc
Q psy2787          20 RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQ   99 (251)
Q Consensus        20 ~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~   99 (251)
                      ..++.|+..||.++|+.|+.-+-|.+.+  |+++.+..++|+.-|.......+.        +       +-+.   --+
T Consensus       396 W~y~~QLtaaL~sIHssGLAck~L~~~k--Ilv~G~~RIriS~C~i~Dvl~~d~--------~-------~~le---~~Q  455 (655)
T KOG3741|consen  396 WSYISQLTAALYSIHSSGLACKTLDLKK--ILVTGKMRIRISGCGIMDVLQEDP--------T-------EPLE---SQQ  455 (655)
T ss_pred             HHHHHHHHHHHHHHHhcCceeecccHhH--eEeeCcceEEEecccceeeecCCC--------C-------cchh---HHh
Confidence            3456788899999999999889999999  999988888887666554433321        0       1111   135


Q ss_pred             hhHHHHHHHHHHHHHhCCCC-CCCCCChhHH-HHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         100 ASDAWMFGVTIWEMFTFGAE-PWVGLNGMQI-LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       100 ~~Di~S~G~il~el~~~g~~-pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +-|.-.||.++..+.+ |.. .+.....++. ...|         ....+.++++++.-....++.+ -++.+++.++.
T Consensus       456 q~D~~~lG~ll~aLAt-~~~ns~~~d~~~~s~~~~I---------~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~~  523 (655)
T KOG3741|consen  456 QNDLRDLGLLLLALAT-GTENSNRTDSTQSSHLTRI---------TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMIG  523 (655)
T ss_pred             hhhHHHHHHHHHHHhh-cccccccccchHHHHHHHh---------hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHHH
Confidence            6788899999999999 653 2332222222 2222         1346778999999999999887 57888877654

>KOG1035|consensus

Probab=96.16  E-value=0.011  Score=57.06  Aligned_cols=136  Identities=15%  Similarity=0.158  Sum_probs=86.4

Q ss_pred             hhhHHhhhhhhCCcccCCCCCC---CceEEEccCCceEEc--cCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCc
Q psy2787          25 PERRGYGTFSVNNICSCQFSSS---SLLILFFSSSSSSSG--DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQ   99 (251)
Q Consensus        25 ~~~~gl~~lH~~~iiHrdlkp~---ni~il~~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~   99 (251)
                      +..+||+|+|+....|.-+..+   +  ...+..+.+.++  ||+.++...+.....  ....+..|.++|.........
T Consensus       294 ~~~~GL~~~h~~~l~~v~L~~s~~~~--~~~~~e~~~~~sl~~~~ss~~l~d~~~~~--~~~~~~~~~~~e~~~~~~~~~  369 (1351)
T KOG1035|consen  294 KLLEGLAYLHSLSLEHVVLSASSSKE--STVDGEGVVAISLSDFDSSKPLPDNEKSF--SDLLAEIRNADEDLKENTAKK  369 (1351)
T ss_pred             HHhhhHHHHHHhccceeEEecccccc--cccCccceeecchhhhcccccCCCcccch--hhcCccccccccccccccchh
Confidence            4458999999996666555554   2  333445556666  888777654432211  222333478888877665544


Q ss_pred             --hhHHHHHHHHHHHHHhCCCCCC-CCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         100 --ASDAWMFGVTIWEMFTFGAEPW-VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       100 --~~Di~S~G~il~el~~~g~~pf-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                        ..|+|.+|....-+.. |..+- .......+.            +........+...+|+..++++|+++.+++.+..
T Consensus       370 ~r~~dL~~lgll~~~~~~-~~~i~~~~~~~~~~l------------~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f  436 (1351)
T KOG1035|consen  370 SRLTDLWCLGLLLLQLSQ-GEDISEKSAVPVSLL------------DVLSTSELLDALPKCLDEDSEERLSALELLTHPF  436 (1351)
T ss_pred             hhhhHHHHHHHHHhhhhh-cCcccccccchhhhh------------ccccchhhhhhhhhhcchhhhhccchhhhhhchh
Confidence              4799999999998888 44322 111111111            0112226788899999999999999999988764


Q ss_pred             h
Q psy2787         177 R  177 (251)
Q Consensus       177 ~  177 (251)
                      .
T Consensus       437 ~  437 (1351)
T KOG1035|consen  437 L  437 (1351)
T ss_pred             c
Confidence            3

>KOG0576|consensus

Probab=95.88  E-value=0.0027  Score=57.42  Aligned_cols=91  Identities=16%  Similarity=0.093  Sum_probs=70.9

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                      +.+...++++++|+..=+|||    |  |+..+ +..|..||+....+....  ......+++.|+|||+...+.+....
T Consensus       341 ~~r~et~~l~~l~~~~~~~~d----~--~l~s~-~~~~~~~~~v~~~L~~~~--~~~t~~~~~~~~~pev~~~~~~~~~p  411 (829)
T KOG0576|consen  341 PLRKETRPLAELHSSYKVHRD----N--ILGSE-EEVKLLDFAVPPQLTRTM--KPRTAIGTPEPLAPEVIQENTIDGCP  411 (829)
T ss_pred             hhhhhcccccccccccccCcc----c--ccccc-cccccccccCCcccCccc--ccccCCCCCCCCCchhhcccccccCC
Confidence            344556889999998778998    7  76554 678999999887654432  45567788999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCC
Q psy2787         102 DAWMFGVTIWEMFTFGAEPWV  122 (251)
Q Consensus       102 Di~S~G~il~el~~~g~~pf~  122 (251)
                      |+|+.|.--.++.- |.+|-.
T Consensus       412 ~~~~~~~~~~~~ap-~~pPr~  431 (829)
T KOG0576|consen  412 DSGSLAVSAIQMAP-GLPPRS  431 (829)
T ss_pred             CccCCCcchhhcCC-CCCCCC
Confidence            99999986666666 666653

>KOG1826|consensus

Probab=95.03  E-value=0.0023  Score=63.37  Aligned_cols=80  Identities=9%  Similarity=0.032  Sum_probs=64.1

Q ss_pred             cccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCC
Q psy2787          38 ICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG  117 (251)
Q Consensus        38 iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g  117 (251)
                      -+|+++|+.|  .++..+..+|++++|+.+... +.....+...+++.|+.++..+.-.++.++|+|..|+.+|+... |
T Consensus      1361 ~v~~~Lkf~l--pmIVtny~v~~gk~gLdKIkn-p~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~-~ 1436 (2724)
T KOG1826|consen 1361 NVSKSLKFTL--PMIVTNYNVKLGKGGLDKIKN-PVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSD-G 1436 (2724)
T ss_pred             chhhhhhhhc--cceecCCcccccccccccccC-chHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhc-c
Confidence            5799999999  889999999999999998322 22223344566777888888888788888999999999999887 7


Q ss_pred             CCCC
Q psy2787         118 AEPW  121 (251)
Q Consensus       118 ~~pf  121 (251)
                      ..+|
T Consensus      1437 n~~f 1440 (2724)
T KOG1826|consen 1437 NAYF 1440 (2724)
T ss_pred             cHHH
Confidence            7666

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=94.96  E-value=0.037  Score=43.60  Aligned_cols=31  Identities=10%  Similarity=0.247  Sum_probs=26.4

Q ss_pred             CCcccCCCCCCCceEEEcc--CCceEEccCCCCcc
Q psy2787          36 NNICSCQFSSSSLLILFFS--SSSSSSGDFGMMRY   68 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~--~~~~kl~DFGla~~   68 (251)
                      ..++|+|+.+.|  |+++.  ++.+.|+||+.+..
T Consensus       174 ~~l~HgD~~~~N--il~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGN--VLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCccc--EEEcCCCCcEEEEEecccccc
Confidence            468999999999  99988  56788999997753

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=94.57  E-value=0.041  Score=46.21  Aligned_cols=30  Identities=17%  Similarity=0.202  Sum_probs=26.3

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++||+|+.+.|  ++++.++.+.|.||+.+.
T Consensus       187 ~~l~HgD~~~~N--vl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDN--VLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCc--EEEECCceEEEeeccccc
Confidence            579999999999  999888877899998764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>PRK05231 homoserine kinase; Provisional

Probab=94.29  E-value=0.035  Score=46.79  Aligned_cols=30  Identities=17%  Similarity=0.166  Sum_probs=25.6

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++||+|+.|.|  |+++.+...-|.||+.+.
T Consensus       187 ~~liHgD~~~~N--il~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDN--VLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCc--EEEECCceEEEEeccccc
Confidence            379999999999  888876666899999765

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=93.47  E-value=0.082  Score=42.82  Aligned_cols=45  Identities=9%  Similarity=-0.047  Sum_probs=34.8

Q ss_pred             CchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787          23 LPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus        23 ~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      ..++++++.-|-. .+++|+||+.-|  ||+. ++.+.++|||-|....
T Consensus       172 ~~~~v~~~~~l~~~a~LVHgDLSEyN--iL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         172 YEDVVEYMRRLYKEAGLVHGDLSEYN--ILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             HHHHHHHHHHHHHhcCcccccchhhh--eEEE-CCeEEEEECccccccC
Confidence            3344566666655 899999999999  8888 8889999999775433

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=93.45  E-value=0.057  Score=43.43  Aligned_cols=29  Identities=17%  Similarity=0.216  Sum_probs=24.7

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++|+|+.+.|  ++++.....-|.||+.+.
T Consensus       165 ~l~HGD~~~~N--vlv~~~~i~giIDw~~a~  193 (235)
T cd05155         165 VWFHGDLAPGN--LLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             eEEeCCCCCCc--EEEECCCEEEEEeCcccC
Confidence            58999999999  888876666799999764

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PRK10271 thiK thiamine kinase; Provisional

Probab=93.17  E-value=0.079  Score=41.12  Aligned_cols=28  Identities=7%  Similarity=-0.030  Sum_probs=24.0

Q ss_pred             cccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          38 ICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        38 iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .+|+|+.|.|  +++++++ ++++||+.+..
T Consensus        79 p~H~D~~~~N--~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         79 PLHMDVHAGN--LVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eecCCCCCcc--EEEECCC-EEEEeCCcccC
Confidence            5899999999  8887777 88999998754

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=93.02  E-value=0.068  Score=44.68  Aligned_cols=29  Identities=17%  Similarity=0.306  Sum_probs=25.3

Q ss_pred             CcccCCCCCCCceEEEccC----CceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSS----SSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~----~~~kl~DFGla~   67 (251)
                      .+||+|+.+.|  |+++.+    +.+.++||..|.
T Consensus       180 ~lcH~Dl~~~N--il~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGN--ILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCe--EEecCCCCCCCcEEEEeeCCCC
Confidence            58999999999  988874    789999998764

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=92.93  E-value=0.071  Score=44.37  Aligned_cols=30  Identities=17%  Similarity=0.184  Sum_probs=26.0

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++||+|+.|.|  ++.++++.+.|.||+.+.
T Consensus       175 ~~l~HgD~~~~N--il~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDN--VLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCccc--EEEeCCceEEEeehhhhc
Confidence            369999999999  999887777899998764

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=92.60  E-value=0.09  Score=42.12  Aligned_cols=29  Identities=17%  Similarity=0.274  Sum_probs=25.4

Q ss_pred             CcccCCCCCCCceEEEcc-CCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFS-SSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~   67 (251)
                      .++|+|+.+.|  |++++ ++.+.++||..|.
T Consensus       171 ~l~H~Dl~~~N--il~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGN--IIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCc--EEEeCCCCCEEEEEcccCC
Confidence            58999999999  99887 5789999998765

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=92.47  E-value=0.084  Score=31.27  Aligned_cols=41  Identities=34%  Similarity=0.745  Sum_probs=32.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIM  236 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  236 (251)
                      .....+.+..++.+.++.. .+..||.+++  +.+.|.||.+.+
T Consensus         8 ~~~dELs~~~Gd~i~v~~~-~~~~W~~g~~--~g~~G~~P~~yV   48 (49)
T PF14604_consen    8 QDPDELSFKKGDVITVLEK-SDDGWWYGRN--TGRTGLFPANYV   48 (49)
T ss_dssp             SSTTB-EB-TTEEEEEEEE-SSTSEEEEEE--TTEEEEEEGGGE
T ss_pred             CCcCEeeEcCCCEEEEEEe-CCCCEEEEEE--CCEEEEECHHhC
Confidence            4456788999999998855 6788999986  889999998865

...

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=92.45  E-value=0.072  Score=42.17  Aligned_cols=30  Identities=17%  Similarity=0.067  Sum_probs=20.3

Q ss_pred             CCcccCCCCCCCceEEEc-cCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFF-SSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~-~~~~~kl~DFGla~   67 (251)
                      ..++|+|+.|.|  |+++ +++.+-|.||+.+.
T Consensus       166 ~~~~HgD~~~~N--il~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  166 PVLIHGDLHPGN--ILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             EEEE-SS-SGGG--EEEESSTTEEEE--GTT-E
T ss_pred             cEEEEecccccc--ceeeeccceeEEEecccce
Confidence            459999999999  8888 55666899998764

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=92.44  E-value=0.098  Score=42.21  Aligned_cols=29  Identities=14%  Similarity=0.063  Sum_probs=25.5

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++|+|+.|.|  |++++++.+.|+||+.+.
T Consensus       164 ~l~HgD~~~~N--il~~~~~~~~iIDwe~a~  192 (244)
T cd05150         164 VVTHGDACLPN--IIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             EEECCCCCCcc--EEEeCCcEEEEEEccccc
Confidence            48999999999  999987778899998664

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>KOG1093|consensus

Probab=92.30  E-value=0.083  Score=47.23  Aligned_cols=74  Identities=20%  Similarity=0.277  Sum_probs=48.3

Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC----------CCCCcHHHHHHHHHHhccCCCCCCC
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR----------PEACPVEVYALMRQCWSKNPAERPK  167 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~----------~~~~~~~~~~li~~cl~~dP~~Rps  167 (251)
                      .+|+||||+|.++.++.- |..-+......+....+..-......          .-.++..+..+...|+...|..||.
T Consensus       109 ~pKsdVwsl~~i~~el~L-~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l  187 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYL-GISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL  187 (725)
T ss_pred             CcchhhhhHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc
Confidence            369999999999999988 88777655544443333221111100          0225556778888999999998886


Q ss_pred             HHHHH
Q psy2787         168 FSTLK  172 (251)
Q Consensus       168 ~~~il  172 (251)
                      ..++.
T Consensus       188 ~~~~~  192 (725)
T KOG1093|consen  188 PMELS  192 (725)
T ss_pred             hhHHh
Confidence            55544

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=92.09  E-value=0.11  Score=41.79  Aligned_cols=28  Identities=11%  Similarity=0.091  Sum_probs=24.5

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++|+|+.|.|  |++++.+ +.|+||+.+.
T Consensus       154 ~~~HgD~~~~N--ii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGN--LITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCc--EEEcCCC-cEEEechhcC
Confidence            46899999999  8888877 8999999765

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=91.96  E-value=0.12  Score=42.20  Aligned_cols=29  Identities=3%  Similarity=-0.067  Sum_probs=24.6

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .++|+|+.|.|  |++++++ +.|.||..+..
T Consensus       147 ~l~H~Dl~~~N--il~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       147 APLHMDVHAYN--LVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             eeecCCCCcCc--EEEeCCC-CEEEeccccCc
Confidence            48999999999  8888777 68999987753

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=91.93  E-value=0.098  Score=41.31  Aligned_cols=30  Identities=20%  Similarity=0.337  Sum_probs=21.0

Q ss_pred             CcccCCCCCCCceEEE-ccCCceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILF-FSSSSSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~-~~~~~~kl~DFGla~~   68 (251)
                      -++|.|+.+.|  |++ +.++.++++||..|..
T Consensus       144 v~cHnDl~~~N--il~~~~~~~~~lIDfEya~~  174 (211)
T PF01633_consen  144 VFCHNDLNPGN--ILINNKDGEVKLIDFEYAGY  174 (211)
T ss_dssp             EEE-S--SGGG--EEETSSSSCEEE--GTT-EE
T ss_pred             eEeeccCcccc--EEeccCCCeEEEecHHHHhh
Confidence            47999999999  999 8889999999998764

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=91.37  E-value=0.15  Score=42.74  Aligned_cols=29  Identities=17%  Similarity=0.311  Sum_probs=24.4

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++||+|+.+.|  ++++. +.+.|.||+.+.
T Consensus       187 ~~liHgD~~~~N--il~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHN--ILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCccc--EEEeC-CcEEEEECcccc
Confidence            478999999999  88876 567899998654

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=91.36  E-value=0.15  Score=29.90  Aligned_cols=40  Identities=33%  Similarity=0.600  Sum_probs=33.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPR  233 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~  233 (251)
                      .....+.+..++.+.+++.... .||.+++.++.+.|.+|.
T Consensus         9 ~~~~eLs~~~Gd~i~v~~~~~~-~Ww~~~~~~~~~~G~vP~   48 (48)
T PF00018_consen    9 EDPDELSFKKGDIIEVLEKSDD-GWWKVRNESTGKEGWVPS   48 (48)
T ss_dssp             SSTTBSEB-TTEEEEEEEESSS-SEEEEEETTTTEEEEEEG
T ss_pred             CCCCEEeEECCCEEEEEEecCC-CEEEEEECCCCcEEEeeC
Confidence            4467788999999999988776 899999998899999984

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]

Probab=90.82  E-value=0.21  Score=41.25  Aligned_cols=39  Identities=10%  Similarity=0.152  Sum_probs=31.0

Q ss_pred             HHhhhhhhC--CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          28 RGYGTFSVN--NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        28 ~gl~~lH~~--~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .++.-++..  -+||.|+.|.|  ++.++.+.++|+||..|..
T Consensus       143 ~~l~~~~~~~~v~cH~Dl~~~N--~l~t~~~~l~LIDWEyAg~  183 (269)
T COG0510         143 RALEEVPKDDLVPCHNDLNPGN--LLLTDKGGLFLIDWEYAGL  183 (269)
T ss_pred             HHhhhcCCCceeeecCCCCccc--eEEcCCCcEEEEecccCCC
Confidence            344444444  58999999999  9999989999999987753

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=90.69  E-value=0.16  Score=39.89  Aligned_cols=38  Identities=13%  Similarity=0.109  Sum_probs=30.9

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      -+.++.+-+..+|..||+-+|+++.|  ..     .-||+|||.+
T Consensus       169 ~~~~~~~dl~~~~k~gI~~~Dv~~~n--y~-----~G~lvDfs~~  206 (207)
T PF13095_consen  169 DIPQMLRDLKILHKLGIVPRDVKPRN--YR-----GGKLVDFSSS  206 (207)
T ss_pred             HHHHHHHHHHHHHHCCeeeccCcccc--cc-----CCEEEecccC
Confidence            45566778999999999999999999  54     2378999864

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=90.40  E-value=0.23  Score=44.77  Aligned_cols=40  Identities=15%  Similarity=0.124  Sum_probs=33.9

Q ss_pred             hhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787          30 YGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus        30 l~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +..+-..|+.|.|..|.|  |++..+|.+.+.|||+......
T Consensus       278 ~~q~~~dgffHaDpHpGN--i~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         278 LRQLLRDGFFHADPHPGN--ILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHHHHhcCccccCCCccc--eEEecCCcEEEEcCcceecCCH
Confidence            444555799999999999  9999999999999999876543

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=90.37  E-value=0.21  Score=39.11  Aligned_cols=31  Identities=16%  Similarity=0.208  Sum_probs=24.2

Q ss_pred             hCCcccCCCCCCCceEEEccC--C---ceEEccCCCCc
Q psy2787          35 VNNICSCQFSSSSLLILFFSS--S---SSSSGDFGMMR   67 (251)
Q Consensus        35 ~~~iiHrdlkp~ni~il~~~~--~---~~kl~DFGla~   67 (251)
                      ...++|+|+.+.|  ++...+  +   .+.+.||..++
T Consensus       119 ~~vl~HgD~~~~N--~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      119 FNVLNHGDLWANN--IMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             ceEEeeCCCCccc--eeeccCCCCCccceEEEecccCC
Confidence            3468999999999  777643  3   58899998775

subfamily of choline kinases

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=90.11  E-value=0.24  Score=42.10  Aligned_cols=28  Identities=21%  Similarity=0.224  Sum_probs=24.8

Q ss_pred             cccCCCCCCCceEEEccCC-ceEEccCCCCc
Q psy2787          38 ICSCQFSSSSLLILFFSSS-SSSSGDFGMMR   67 (251)
Q Consensus        38 iiHrdlkp~ni~il~~~~~-~~kl~DFGla~   67 (251)
                      |||+|+-|.|  |+++... .+.+.|||-+.
T Consensus       199 iIH~D~~~~N--Vl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDN--VLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccc--eeEcCCCCeeeEEEccccc
Confidence            9999999999  9998887 48899999765

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=89.78  E-value=0.18  Score=42.44  Aligned_cols=29  Identities=14%  Similarity=0.103  Sum_probs=26.3

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      ++||+|+.+.|  ++.++++.+.++||..+.
T Consensus       197 ~lcHgD~~~~N--vl~~~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSH--FLYDETRGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHh--EEEcCCCCEEEEEhhhcc
Confidence            79999999999  999988889999998765

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=89.70  E-value=0.3  Score=39.14  Aligned_cols=70  Identities=10%  Similarity=0.069  Sum_probs=46.0

Q ss_pred             HHhhhhhh--CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHH
Q psy2787          28 RGYGTFSV--NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWM  105 (251)
Q Consensus        28 ~gl~~lH~--~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S  105 (251)
                      ++|.-.|+  .+.+|+|..|+|  |.-|+.|.+||.|=+.--  +.           +.-|.--|+   ...++++.+-+
T Consensus       152 ~~L~~fH~~~~~~lHGD~np~N--iM~D~~G~lKlVDP~~Ll--~~-----------~V~~vN~~Y---~~lT~~aE~~~  213 (308)
T PF07387_consen  152 KDLMDFHSENQHCLHGDCNPDN--IMCDKFGYLKLVDPVCLL--EN-----------QVNMVNIEY---ESLTQEAEVKV  213 (308)
T ss_pred             HHHHHhhccCCCeecCCCChhh--eeecCCCCEEecChhhhh--hh-----------eeeEEeeec---cccChHHHHHH
Confidence            45667784  369999999999  999999999999965321  11           111333122   22466777777


Q ss_pred             HHHHHHHHHh
Q psy2787         106 FGVTIWEMFT  115 (251)
Q Consensus       106 ~G~il~el~~  115 (251)
                      |-.-++++..
T Consensus       214 fv~s~l~~v~  223 (308)
T PF07387_consen  214 FVKSCLKLVE  223 (308)
T ss_pred             HHHHHHHHHH
Confidence            7666666665

The function of this family is unknown.

>PLN02236 choline kinase

Probab=89.08  E-value=0.27  Score=42.09  Aligned_cols=29  Identities=10%  Similarity=0.238  Sum_probs=24.8

Q ss_pred             CcccCCCCCCCceEEEcc-CCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFS-SSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~   67 (251)
                      .++|+|+++.|  |++++ ++.+.++||..+.
T Consensus       201 ~~cH~Dl~~~N--il~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        201 GFCHNDLQYGN--IMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             eEEeCCCCcCc--EEEeCCCCcEEEEeehhcc
Confidence            58999999999  88875 4689999998775

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=88.94  E-value=0.29  Score=40.50  Aligned_cols=30  Identities=10%  Similarity=0.096  Sum_probs=24.3

Q ss_pred             CcccCCCCCCCceEEEccCC-ceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILFFSSS-SSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~   68 (251)
                      .++|+|+.+.|  |+++.++ ..-|.||+.+..
T Consensus       186 ~lvHGD~~~~N--ilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGH--ILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCc--EEEeCCCCEEEEECcHhccc
Confidence            48999999999  8888745 456999997753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=88.65  E-value=0.32  Score=41.43  Aligned_cols=35  Identities=14%  Similarity=0.242  Sum_probs=23.6

Q ss_pred             CCcccCCCCCCCceEEEc----------------cCCceEEccCCCCcccC
Q psy2787          36 NNICSCQFSSSSLLILFF----------------SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~----------------~~~~~kl~DFGla~~~~   70 (251)
                      .+.+|-||||+||+|+-.                +...++|.||.+|+..+
T Consensus       298 ~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~  348 (434)
T PF05445_consen  298 TNFLHVDLKPDNILIFDSKEPIRIKFGNRNYVFKEPIRCCLNDFDFSQVAN  348 (434)
T ss_pred             ceeeecccCcCcEEEecCCCceEEEECCeEEEecccceeeecccCHHHhcc
Confidence            468999999999443322                12246788888887643

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>PHA03111 Ser/Thr kinase; Provisional

Probab=88.53  E-value=0.25  Score=41.90  Aligned_cols=34  Identities=15%  Similarity=0.274  Sum_probs=22.2

Q ss_pred             CCcccCCCCCCCceEEEcc----------------CCceEEccCCCCccc
Q psy2787          36 NNICSCQFSSSSLLILFFS----------------SSSSSSGDFGMMRYS   69 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~----------------~~~~kl~DFGla~~~   69 (251)
                      .+.+|-||||+||+|+-.+                ...++|.||.+++..
T Consensus       302 ~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~  351 (444)
T PHA03111        302 DNFLHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQVA  351 (444)
T ss_pred             ceeeeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHHc
Confidence            4689999999994433221                123567788877753

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=88.00  E-value=0.068  Score=41.59  Aligned_cols=46  Identities=9%  Similarity=-0.091  Sum_probs=36.4

Q ss_pred             CCCchhhHHhhhhhh---CCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          21 KPLPPERRGYGTFSV---NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~---~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      ++..+++..+++++.   ..+.-+|++++|  +-+++++.+|+.|......
T Consensus        63 ~iA~~lL~~l~~l~~~~~~~~~lcDv~~~n--fgv~~~~~lk~iDld~v~~  111 (188)
T PF12260_consen   63 KIALQLLELLEELDHGPLGFFYLCDVSPDN--FGVNDDGRLKLIDLDDVFV  111 (188)
T ss_pred             HHHHHHHHHHHHHhcCCCCcEEEeecchHH--eEEeCCCcEEEEechhcch
Confidence            445566677777766   357889999999  8888999999999986654

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1235|consensus

Probab=87.61  E-value=0.22  Score=45.00  Aligned_cols=37  Identities=11%  Similarity=0.048  Sum_probs=29.5

Q ss_pred             hhhCCcccCCCCCCCceEEEcc----CCceEEccCCCCcccCC
Q psy2787          33 FSVNNICSCQFSSSSLLILFFS----SSSSSSGDFGMMRYSQN   71 (251)
Q Consensus        33 lH~~~iiHrdlkp~ni~il~~~----~~~~kl~DFGla~~~~~   71 (251)
                      |=..|++|+|-.|.|  |++..    ++.+.+-|||+......
T Consensus       317 If~~GffHaDPHPGN--ilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  317 IFKTGFFHADPHPGN--ILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HHhcCCccCCCCCCc--EEEecCCCCCccEEEEcccccccccH
Confidence            345689999999999  77763    56889999999876544

>smart00326 SH3 Src homology 3 domains

Probab=86.19  E-value=0.77  Score=27.30  Aligned_cols=43  Identities=30%  Similarity=0.653  Sum_probs=34.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++.. ...||.+++.+ .+.|.+|...+.
T Consensus        14 ~~~~~l~~~~Gd~v~v~~~~-~~~w~~~~~~~-~~~G~vP~~~v~   56 (58)
T smart00326       14 QDPDELSFKKGDIITVLEKS-DDGWWKGRLGR-GKEGLFPSNYVE   56 (58)
T ss_pred             CCCCCCCCCCCCEEEEEEcC-CCCeEEEEeCC-CCEEEEchHHEE
Confidence            34456778899999988887 57899888766 888999987664

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=85.81  E-value=0.43  Score=28.83  Aligned_cols=43  Identities=30%  Similarity=0.657  Sum_probs=31.9

Q ss_pred             ccCCcccccCCCeEEEe-cCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVII-EGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.++ +... ..||.+.+  ....|.||...+..
T Consensus        11 ~~~~~Ls~~~Gd~i~v~~~~~~-~~ww~~~~--~g~~G~~P~~~v~~   54 (55)
T PF07653_consen   11 EDPDELSFKKGDVIEVLGEKDD-DGWWLGEN--NGRRGWFPSSYVEE   54 (55)
T ss_dssp             SSTTB-EB-TTEEEEEEEEECS-TSEEEEEE--TTEEEEEEGGGEEE
T ss_pred             CCCCceEEecCCEEEEEEeecC-CCEEEEEE--CCcEEEEcHHHEEE
Confidence            34566899999999998 5544 47899987  67889999987753

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=85.73  E-value=1.3  Score=25.84  Aligned_cols=41  Identities=32%  Similarity=0.732  Sum_probs=32.3

Q ss_pred             CCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      ...+.+..++.+.+++. ....||.+++.++ +.|.+|...+.
T Consensus        13 ~~~l~~~~Gd~v~v~~~-~~~~w~~~~~~~~-~~G~vP~~~v~   53 (54)
T cd00174          13 PDELSFKKGDIIEVLEK-SDDGWWEGRLLGG-KRGLFPSNYVE   53 (54)
T ss_pred             CCCCCCCCCCEEEEEEc-CCCCeEEEEECCC-CEEEEccccCc
Confidence            35677888999988888 3467999997776 88999988764

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=85.37  E-value=0.66  Score=39.49  Aligned_cols=28  Identities=11%  Similarity=0.061  Sum_probs=24.2

Q ss_pred             cccCCCCCCCceEEEcc-CCceEEccCCCCc
Q psy2787          38 ICSCQFSSSSLLILFFS-SSSSSSGDFGMMR   67 (251)
Q Consensus        38 iiHrdlkp~ni~il~~~-~~~~kl~DFGla~   67 (251)
                      ++|.|+.+.|  |++++ ++.++++||..|.
T Consensus       184 ~CHnDl~~~N--iL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        184 FAHNDLLSGN--LMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEECCCCccc--EEEeCCCCcEEEEcccccC
Confidence            6999999999  88864 5689999998775

>PRK06148 hypothetical protein; Provisional

Probab=85.06  E-value=0.7  Score=45.46  Aligned_cols=31  Identities=16%  Similarity=0.081  Sum_probs=25.2

Q ss_pred             CCcccCCCCCCCceEEEccCC--ce-EEccCCCCcc
Q psy2787          36 NNICSCQFSSSSLLILFFSSS--SS-SSGDFGMMRY   68 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~--~~-kl~DFGla~~   68 (251)
                      .++||.|+.+.|  |+++.++  .+ =|+|||-+..
T Consensus       203 ~~vIHgDln~~N--iLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYN--ILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             cceECCCCCccc--EEEcCCCCcceEEEEECccccc
Confidence            469999999999  9988775  44 4999998764

>KOG2268|consensus

Probab=84.75  E-value=0.66  Score=39.46  Aligned_cols=35  Identities=14%  Similarity=0.134  Sum_probs=29.6

Q ss_pred             hhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          31 GTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        31 ~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      --|..+|+||+|+.-=|  |++++++.++++||--+.
T Consensus       216 v~la~~GlIHgDFNEFN--imv~dd~~i~vIDFPQmv  250 (465)
T KOG2268|consen  216 VRLANHGLIHGDFNEFN--IMVKDDDKIVVIDFPQMV  250 (465)
T ss_pred             HHHHHcCceecccchhe--eEEecCCCEEEeechHhh
Confidence            34567899999999999  999999999999996543

>PRK11768 serine/threonine protein kinase; Provisional

Probab=83.08  E-value=0.7  Score=39.20  Aligned_cols=28  Identities=14%  Similarity=0.011  Sum_probs=22.7

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++||+|+.+.|  |+.+ + .+.|+||+-+.
T Consensus       196 ~~liHgD~h~~N--vL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGN--ILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchh--cccc-C-CcEEEeCCCCC
Confidence            468999999999  7775 3 46799999765

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=81.84  E-value=1.2  Score=37.76  Aligned_cols=30  Identities=3%  Similarity=0.168  Sum_probs=26.9

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .++|+|+.+.|  ++++..+-+-|.||+++..
T Consensus       199 ~lvHGD~~~gN--lii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         199 VLVHGDYRPGN--LIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             eeeeCCcccCC--EEEeCCCeeEEEecccccc
Confidence            58999999999  9998888889999998865

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=81.55  E-value=0.81  Score=39.47  Aligned_cols=29  Identities=17%  Similarity=0.172  Sum_probs=26.6

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      ..-|||+.-.|  |+++ +|.+.|+||-++|.
T Consensus       342 ~fehrnlt~~n--iLId-~GnvtLIDfklsRl  370 (488)
T COG5072         342 PFEHRNLTLDN--ILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             Ccccccccccc--eeee-cCceEEEEeeeeec
Confidence            46799999999  9999 99999999999995

>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function

Probab=80.29  E-value=0.89  Score=37.76  Aligned_cols=28  Identities=29%  Similarity=0.478  Sum_probs=22.2

Q ss_pred             cccCCCCCCCceEEEcc--CC---ceEEccCCCCc
Q psy2787          38 ICSCQFSSSSLLILFFS--SS---SSSSGDFGMMR   67 (251)
Q Consensus        38 iiHrdlkp~ni~il~~~--~~---~~kl~DFGla~   67 (251)
                      |+|+|+...|  |+...  +|   .+++.||-+++
T Consensus       217 l~HGD~w~nN--ilf~~~~~g~~~~~~liDfQ~~~  249 (294)
T PF02958_consen  217 LCHGDFWTNN--ILFKYDDDGKPIDVVLIDFQLAR  249 (294)
T ss_pred             EEcCccCHHh--EeEccccccccccceeecccccc
Confidence            8999999999  66644  33   68899998765

All known members of this group are proteins from drosophila and Caenorhabditis elegans.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	251
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		5e-54
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		6e-41
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		5e-40
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		5e-40
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		1e-39
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		1e-39
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		5e-39
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-24
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		4e-24
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		6e-24
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		6e-24
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		7e-24
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		7e-24
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		7e-24
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		7e-24
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		7e-24
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		8e-24
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		6e-23
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		7e-23
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-23
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-23
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-22
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		1e-22
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-22
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		1e-22
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-22
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-22
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-22
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		1e-22
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-22
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		1e-22
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		2e-22
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-22
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-22
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		2e-22
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		2e-22
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		2e-22
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		2e-22
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		2e-22
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		2e-22
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		2e-22
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		2e-22
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		2e-22
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-22
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		8e-22
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-21
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		1e-21
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		1e-21
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-21
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-21
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		3e-21
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		3e-20
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		4e-20
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		4e-20
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		5e-20
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		5e-20
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		7e-20
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		7e-20
2pl0_A	289	Lck Bound To Imatinib Length = 289		9e-20
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		9e-20
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-19
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-19
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		1e-19
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		1e-19
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		1e-19
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		2e-19
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		2e-19
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-19
1fvr_A	327	Tie2 Kinase Domain Length = 327		2e-19
4i20_A	329	Crystal Structure Of Monomeric (v948r) Primary Onco		3e-19
4i1z_A	329	Crystal Structure Of The Monomeric (v948r) Form Of		3e-19
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		3e-19
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		4e-19
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-19
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-19
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-19
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-19
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		6e-19
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-19
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-19
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		6e-19
3b2t_A	311	Structure Of Phosphotransferase Length = 311		7e-19
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		7e-19
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-19
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		8e-19
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		8e-19
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		8e-19
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		8e-19
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		8e-19
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		9e-19
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		9e-19
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		9e-19
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		9e-19
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		9e-19
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		9e-19
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		9e-19
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		9e-19
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		9e-19
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		9e-19
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		9e-19
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		9e-19
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		9e-19
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		9e-19
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		9e-19
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		9e-19
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		9e-19
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		9e-19
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		9e-19
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		9e-19
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		9e-19
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		9e-19
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		9e-19
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		9e-19
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		9e-19
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		9e-19
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		9e-19
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		9e-19
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-18
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		1e-18
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		1e-18
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		1e-18
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		1e-18
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		1e-18
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		1e-18
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		1e-18
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-18
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		1e-18
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		1e-18
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		1e-18
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-18
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		1e-18
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-18
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		1e-18
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		1e-18
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		1e-18
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		1e-18
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		1e-18
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		2e-18
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-18
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		2e-18
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-18
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		2e-18
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		2e-18
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		2e-18
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-18
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		2e-18
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		2e-18
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		2e-18
3w2o_A	331	Egfr Kinase Domain T790m/l858r Mutant With Tak-285		2e-18
2eb3_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (L8		2e-18
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-18
4i21_A	329	Crystal Structure Of L858r + T790m Egfr Kinase Doma		2e-18
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		2e-18
2itt_A	327	Crystal Structure Of Egfr Kinase Domain L858r Mutat		2e-18
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		2e-18
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		2e-18
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-18
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		2e-18
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		3e-18
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		3e-18
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		3e-18
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		4e-18
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		4e-18
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		5e-18
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		5e-18
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		5e-18
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-18
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		6e-18
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		7e-18
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		8e-18
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		8e-18
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		9e-18
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-17
3a4o_X	286	Lyn Kinase Domain Length = 286		1e-17
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		1e-17
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		2e-17
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-17
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		2e-17
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		2e-17
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-17
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		3e-17
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		3e-17
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		3e-17
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		3e-17
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		3e-17
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		3e-17
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		3e-17
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		3e-17
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		3e-17
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		5e-17
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		5e-17
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		8e-17
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-16
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-16
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-16
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-16
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		1e-16
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		1e-16
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-16
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-16
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		1e-16
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		1e-16
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-16
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		1e-16
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		1e-16
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		1e-16
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		1e-16
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		1e-16
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-16
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		1e-16
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		1e-16
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		1e-16
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-16
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		2e-16
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		2e-16
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-16
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		2e-16
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-16
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		3e-16
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		3e-16
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		3e-16
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		3e-16
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		3e-16
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		3e-16
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		3e-16
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		3e-16
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		3e-16
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-16
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		3e-16
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-16
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		3e-16
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		5e-16
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		5e-16
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		6e-16
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		6e-16
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		6e-16
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		6e-16
4fl3_A	635	Structural And Biophysical Characterization Of The		7e-16
4fl2_A	636	Structural And Biophysical Characterization Of The		7e-16
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		7e-16
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		7e-16
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		7e-16
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		7e-16
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		7e-16
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		8e-16
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		8e-16
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		8e-16
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		9e-16
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		9e-16
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-15
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-15
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-15
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-15
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-15
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-15
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-15
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		1e-15
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-15
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		1e-15
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		1e-15
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-15
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		1e-15
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		1e-15
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-15
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-15
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-15
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		2e-15
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		2e-15
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		2e-15
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		2e-15
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		2e-15
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		2e-15
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		2e-15
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-15
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		5e-15
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		5e-15
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		6e-15
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		6e-15
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		6e-15
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		6e-15
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		6e-15
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		7e-15
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		8e-15
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		8e-15
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		8e-15
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		8e-15
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		8e-15
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		8e-15
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		8e-15
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		8e-15
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		9e-15
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		9e-15
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		9e-15
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		9e-15
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		9e-15
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		9e-15
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		9e-15
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		1e-14
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		1e-14
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-14
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-14
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		1e-14
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-14
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-14
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		2e-14
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-14
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		2e-14
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		2e-14
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-14
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-14
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-14
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-14
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		2e-14
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		5e-14
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		1e-13
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		1e-13
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		1e-13
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-13
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-13
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-13
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		2e-13
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		5e-13
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		5e-13
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-12
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		7e-11
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-10
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		2e-07
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		5e-07
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		6e-07
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		1e-05
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		6e-05
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		6e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		1e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		1e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-04

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score =  207 bits (527), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 97/178 (54%), Positives = 120/178 (67%), Gaps = 5/178 (2%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR     +D YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct: 157 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 216
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct: 217 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 276
Query: 179 TPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIM 236
            P  M+A Q+  E D   KL+I   D I +IEG  E +WW+GQN  T  +G FPRN++
Sbjct: 277 QPTDMRALQDFEEPD---KLHIQMNDVITVIEGRAENYWWRGQNTRTLCVGPFPRNVV 331

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score =  164 bits (414), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 74/127 (58%), Positives = 89/127 (70%), Gaps = 2/127 (1%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR     +D YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct: 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct: 223 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282
Query: 179 TPAVMKA 185
            P  M+A
Sbjct: 283 QPTDMRA 289

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 2/127 (1%)
Query: 61  GDFGMMR-YSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR   QND + VM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct: 163 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct: 223 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282
Query: 179 TPAVMKA 185
            P  M+A
Sbjct: 283 QPTDMRA 289

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 72/123 (58%), Positives = 86/123 (69%), Gaps = 2/123 (1%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR     +D YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct: 213 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
Query: 179 TPA 181
            P 
Sbjct: 273 QPT 275

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR     +D YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct: 157 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 216
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L
Sbjct: 217 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 273

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score =  159 bits (402), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 71/117 (60%), Positives = 85/117 (72%), Gaps = 2/117 (1%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR     +D YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct: 153 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L
Sbjct: 213 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFL 269

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score =  157 bits (397), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 73/123 (59%), Positives = 87/123 (70%), Gaps = 2/123 (1%)
Query: 61  GDFGMMR-YSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR   QND + VM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct: 153 GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 212
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct: 213 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 272
Query: 179 TPA 181
            P 
Sbjct: 273 QPT 275

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 533 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L
Sbjct: 593 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score =  107 bits (268), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 533 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L
Sbjct: 593 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 646

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 156 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L
Sbjct: 216 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 269

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score =  107 bits (267), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 155 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 214
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L
Sbjct: 215 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 268

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 158 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L
Sbjct: 218 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 181 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 240
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L
Sbjct: 241 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 294

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 153 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L
Sbjct: 213 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 266

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score =  107 bits (267), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 153 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK
Sbjct: 213 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK 263

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score =  107 bits (266), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 47/115 (40%), Positives = 71/115 (61%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 150 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 209
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L
Sbjct: 210 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 263

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score =  107 bits (266), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 46/112 (41%), Positives = 70/112 (62%), Gaps = 1/112 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 153 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK
Sbjct: 213 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK 263

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score =  104 bits (259), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 1/112 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++       +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 153 GDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK
Sbjct: 213 FQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK 263

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 360 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 419
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 420 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 473

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 399 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 458
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 459 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 512

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 213 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 218 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 155 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 215 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 268

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 218 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 213 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 213 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 166 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 225
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 226 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 279

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 213 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 155 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 215 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 268

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  YS  D Y +  R  LP  W P ES+ + +F+  SD W FGV +WE+FT+G 
Sbjct: 200 GDFGMSRDIYS-TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +PW  L+  + +  I  +G  L RP ACP EVYA+MR CW + P +R    ++KD   RL
Sbjct: 259 QPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQR---HSIKDVHARL 314

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 213 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 218 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 158 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 218 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 213 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 266

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 157 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 216
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 217 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 270

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  YS  D Y +  R  LP  W P ES+ + +F+  SD W FGV +WE+FT+G 
Sbjct: 171 GDFGMSRDIYS-TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +PW  L+  + +  I  +G  L RP ACP EVYA+MR CW + P +R    ++KD   RL
Sbjct: 230 QPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQR---HSIKDVHARL 285

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 7/120 (5%)
Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  YS  D Y +  R  LP  W P ES+ + +F+  SD W FGV +WE+FT+G 
Sbjct: 177 GDFGMSRDIYS-TDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +PW  L+  + +  I  +G  L RP ACP EVYA+MR CW + P +R    ++KD   RL
Sbjct: 236 QPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQR---HSIKDVHARL 291

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY +++ Y       LP  W   ES+   +F+ ASD WMF V +WE+ +FG +P
Sbjct: 151 GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 210
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +  L    ++  +++ G+RLP+P+ CP  +Y LM +CW  +P++RP+F+ L
Sbjct: 211 FFWLENKDVIGVLEK-GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 260

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY +++ Y       LP  W   ES+   +F+ ASD WMF V +WE+ +FG +P
Sbjct: 167 GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 226
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +  L    ++  +++ G+RLP+P+ CP  +Y LM +CW  +P++RP+F+ L
Sbjct: 227 FFWLENKDVIGVLEK-GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 276

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 1/111 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY +++ Y       LP  W   ES+   +F+ ASD WMF V +WE+ +FG +P
Sbjct: 155 GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +  L    ++  +++ G+RLP+P+ CP  +Y LM +CW  +P++RP+F+ L
Sbjct: 215 FFWLENKDVIGVLEK-GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 264

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 154 ADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 214 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 267

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 155 ADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 214
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 215 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 268

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D +        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 151 ADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 211 YPGIDPSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 4/120 (3%)
Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ R  YS  D Y       +P  W P ES+ +N+++  SD W +GV +WE+F++G 
Sbjct: 216 ADFGLSRNIYSA-DYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 274
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +P+ G+   +++  + R+G  L  PE CP+E+Y LMR CWSK PA+RP F ++   L R+
Sbjct: 275 QPYYGMAHEEVIYYV-RDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N FS  SD W FGV +WE+ T+G  P
Sbjct: 172 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
           + G++  Q+   +++ G R+ +PE CP +VY LMR CW  +PA+RP F+
Sbjct: 232 YPGIDLSQVYDLLEK-GYRMEQPEGCPPKVYELMRACWKWSPADRPSFA 279

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D          P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 154 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 213
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 214 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 267

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 99.8 bits (247), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D          P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 158 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 217
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 218 YPGIDLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 271

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D          P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 151 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 211 YPGIDPSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 99.4 bits (246), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D          P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 151 ADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 210
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  Q+ + ++++  R+ RPE CP +VY LMR CW  NP++RP F+ +    
Sbjct: 211 YPGIDPSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAF 264

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  YS  D Y +     LP  W P ES+ + +F+  SD W FGV +WE+FT+G 
Sbjct: 175 GDFGMSRDVYS-TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK 233
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +PW  L+  ++++ I  +G  L RP  CP EVY +M  CW + P +R         +Y++
Sbjct: 234 QPWFQLSNTEVIECIT-QGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKE----IYKI 288
Query: 179 TPAVMKAT 186
             A+ KAT
Sbjct: 289 LHALGKAT 296

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  YS  D Y +     LP  W P ES+ + +F+  SD W  GV +WE+FT+G 
Sbjct: 170 GDFGMSRDVYS-TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +PW  L+  ++++ I  +G  L RP  CP EVY LM  CW + P  R     +   L  L
Sbjct: 229 QPWYQLSNNEVIECIT-QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287
Query: 179 TPA 181
             A
Sbjct: 288 AKA 290

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/122 (36%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W FG+ +WE+ T+G  
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+  L+  ++++ I+ +G RLP P  CP  +Y LM QCW +  A RPKF+ +   L +L 
Sbjct: 250 PYWELSNHEVMKAIN-DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308
Query: 180 PA 181
            A
Sbjct: 309 RA 310

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 44/111 (39%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 62  DFGMMRYSQNDCYVMTE-RKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFGM R   +  Y  +   + +P  W   E+L + ++S  SD W FG+ +WE F+ GA P
Sbjct: 256 DFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +  L+  Q  + +++ G RLP PE CP  V+ LM QCW+  P +RP FST+
Sbjct: 316 YPNLSNQQTREFVEK-GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++    F+  SD W FG+ + E+ T+G  P
Sbjct: 326 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  ++++ ++R G R+PRPE CP E+Y +M +CW   P ERP F  ++  L
Sbjct: 386 YPGMSNPEVIRALER-GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 439

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++    F+  SD W FG+ + E+ T+G  P
Sbjct: 153 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  ++++ ++R G R+PRPE CP E+Y +M +CW   P ERP F  ++  L
Sbjct: 213 YPGMSNPEVIRALER-GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 266

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 147 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 207 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 260

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 94.0 bits (232), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 146 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 206 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 259

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 161 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 220
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 221 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 274

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 93.6 bits (231), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 156 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 216 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 269

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 157 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 217 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 151 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 211 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +MR+CW  +   RPKF  L
Sbjct: 223 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 272

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 170 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +MR+CW  +   RPKF  L
Sbjct: 230 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 279

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +MR+CW  +   RPKF  L
Sbjct: 220 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 269

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    + YV      LP  W  +ESL ++ ++  SD W +GV +WE+ + G  P
Sbjct: 181 ADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   ++ +K+  +G RL +P  C  EVY LMRQCW + P ERP F+ +   L R+
Sbjct: 239 YCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 295

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    + YV      LP  W  +ESL ++ ++  SD W +GV +WE+ + G  P
Sbjct: 174 ADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   ++ +K+  +G RL +P  C  EVY LMRQCW + P ERP F+ +   L R+
Sbjct: 232 YCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 62  DFGMMRYSQND---CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           DFG+ R  ++D    Y  T  K +P  W   E++    FS ASD W FGV +WE+  +G 
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGK-IPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+  +    ++  ++ EG RLP P  CP  ++ LM  CW K+ A+RP+FS +   L  L
Sbjct: 253 RPYWNMTNRDVISSVE-EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311
Query: 179 --TPAVMKATQNC 189
             +P  ++AT   
Sbjct: 312 IRSPESLRATATV 324

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    + YV      LP  W  +ESL ++ ++  SD W +GV +WE+ + G  P
Sbjct: 184 ADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   ++ +K+  +G RL +P  C  EVY LMRQCW + P ERP F+ +   L R+
Sbjct: 242 YCGMTCAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298

>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 77  TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE 136
            E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P+ G+   +I   I  +
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEK 236
Query: 137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           GERLP+P  C ++VY +MR+CW  +   RPKF  L
Sbjct: 237 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271

>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Query: 77  TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE 136
            E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P+ G+   +I   I  +
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEK 236
Query: 137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           GERLP+P  C ++VY +MR+CW  +   RPKF  L
Sbjct: 237 GERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 271

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRYSQNDCYVMTE-RKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFGM R   +     +   + +P  W   E+L + ++S  SD W FG+ +WE F+ GA P
Sbjct: 256 DFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +  L+  Q  + +++ G RLP PE CP  V+ LM QCW+  P +RP FST+
Sbjct: 316 YPNLSNQQTREFVEK-GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++    FS ASD W FGV +WE+  +G  
Sbjct: 194 DFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL- 178
           P+  +    ++  ++ EG RLP P  CP  ++ LM  CW K+ A+RP+FS +   L  L 
Sbjct: 254 PYWNMTNRDVISSVE-EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312
Query: 179 -TPAVMKATQNC 189
            +P  ++AT   
Sbjct: 313 RSPESLRATATV 324

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 259 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 259 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 259 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 259 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 304
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 305 PYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 259 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 259 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 188 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 247
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 248 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 186 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 245
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 246 PYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 90.9 bits (224), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 191 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 250
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 251 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 259 PYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 202 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 261
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 262 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 309

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 223 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 166 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 226 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 275

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 159 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 218
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 219 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 272

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 90.5 bits (223), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 227 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 220 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 161 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 221 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 270

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 185 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 245 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 294

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 227 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 227 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 63/114 (55%), Gaps = 4/114 (3%)
Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ R  YS  D Y       LP  W  +ESL  N ++  SD W FGVT+WE+ T G 
Sbjct: 179 ADFGLSRKIYS-GDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
            P+ G+   +I   +   G RL +P  C  EVY LM QCWS +P +RP F+ L+
Sbjct: 238 TPYAGIENAEIYNYL-IGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLR 290

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 154 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 214 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 263

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 174 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 233
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 234 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 281

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 151 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 211 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 170 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 229
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 230 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 277

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 171 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 230
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 231 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 278

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 157 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 217 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 266

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 173 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 232
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 233 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 280

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 220 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 90.5 bits (223), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 153 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 213 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 266

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 151 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 211 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 223 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 173 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 232
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 233 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 280

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 162 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 222 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 167 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 226
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 227 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 274

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 160 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 219
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 220 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 273

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y   ++     LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG 225
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
           A P+  ++   +   +  +G RLP+PE CP  +Y +M+QCW  +PA RP F  L   + +
Sbjct: 226 APPYRHIDPFDLTHFLA-QGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284
Query: 178 LTPAVM 183
           +  A++
Sbjct: 285 IVSALL 290

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 157 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 217 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 270

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 220 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 161 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 221 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 270

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 162 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 222 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 164 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 224 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 273

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 90.1 bits (222), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 220 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 152 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 212 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 265

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 223 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 272

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 240 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 287

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 239
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 240 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 287

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+ +SD W FGV +WE+ +   +
Sbjct: 171 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 230
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKDCL 175
           P+ GL+  Q+L K   +G  L +P+ CP  V  LMR CW  NP  RP F    + LKD L
Sbjct: 231 PYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 289
Query: 176 YRLTPAV 182
           +   P V
Sbjct: 290 HPSFPEV 296

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 233 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 292
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+ 
Sbjct: 293 PYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 2/111 (1%)
Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 194 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+   +I   I  +GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 254 YDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 303

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 70/120 (58%), Gaps = 5/120 (4%)
Query: 62  DFGMMRYSQND---CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           DFG+ R  ++D    Y  T  K +P  W   E++++ +F+ ASD W +G+ +WE+ ++G 
Sbjct: 188 DFGLSRVIEDDPEAVYTTTGGK-IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 246
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+  ++   +++ I+ EG RLP P  CP  ++ LM  CW K  AERPKF  +   L ++
Sbjct: 247 RPYWDMSNQDVIKAIE-EGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGILDKM 305

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+ +SD W FGV +WE+ +   +
Sbjct: 172 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKDCL 175
           P+ GL+  Q+L K   +G  L +P+ CP  V  LMR CW  NP  RP F    + LKD L
Sbjct: 232 PYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
Query: 176 YRLTPAV 182
           +   P V
Sbjct: 291 HPSFPEV 297

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 184 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 243
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+ 
Sbjct: 244 PYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 302

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+ 
Sbjct: 252 PYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+ 
Sbjct: 252 PYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 185 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 244
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+ 
Sbjct: 245 PYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 303

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 181 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 240
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+ 
Sbjct: 241 PYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 299

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 192 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+ 
Sbjct: 252 PYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 310

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFGM R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 218
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+  ++   +++ I+ EG RLP P  CP+ ++ LM  CW K  ++RPKF  + + L +L 
Sbjct: 219 PYWDMSNQDVIKAIE-EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 277
Query: 180 --PAVMKAT 186
             P  +K T
Sbjct: 278 RNPNSLKRT 286

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 177 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 236
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+ 
Sbjct: 237 PYPGV-PVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 295

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFGM R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL- 178
           P+  ++   +++ I+ EG RLP P  CP+ ++ LM  CW K  ++RPKF  + + L +L 
Sbjct: 234 PYWDMSNQDVIKAIE-EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 292
Query: 179 -TPAVMKAT 186
             P  +K T
Sbjct: 293 RNPNSLKRT 301

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 73/129 (56%), Gaps = 5/129 (3%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFGM R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 212
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+  ++   +++ I+ EG RLP P  CP+ ++ LM  CW K  ++RPKF  + + L +L 
Sbjct: 213 PYWDMSNQDVIKAIE-EGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLI 271
Query: 180 --PAVMKAT 186
             P  +K T
Sbjct: 272 RNPNSLKRT 280

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+ +SD W FGV +WE+ +   +
Sbjct: 173 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 232
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKDCL 175
           P+ GL+  Q+L K   +G  L +P+ CP  V  LMR CW  NP  RP F    + LKD L
Sbjct: 233 PYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 291
Query: 176 YRLTPAV 182
           +   P V
Sbjct: 292 HPSFPEV 298

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+ +SD W FGV +WE+ +   +
Sbjct: 172 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKDCL 175
           P+ GL+  Q+L K   +G  L +P+ CP  V  LMR CW  NP  RP F    + LKD L
Sbjct: 232 PYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
Query: 176 YRLTPAV 182
           +   P V
Sbjct: 291 HPSFPEV 297

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 250 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  ++      E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 151 ADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L
Sbjct: 211 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVL 264

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 250 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 250 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 248 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 250 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 250 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 250 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 250 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 89.4 bits (220), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 221 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278

>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 77  TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE 136
            E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P+ G+   +I   I  +
Sbjct: 180 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEK 238
Query: 137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 239 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 273

>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 77  TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE 136
            E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P+ G+   +I   I  +
Sbjct: 183 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEK 241
Query: 137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 242 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 276

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 250 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 77  TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE 136
            E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P+ G+   +I   I  +
Sbjct: 178 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEK 236
Query: 137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 237 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 271

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 221 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278

>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 77  TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE 136
            E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P+ G+   +I   I  +
Sbjct: 176 AEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEK 234
Query: 137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           GERLP+P  C ++VY +M +CW  +   RPKF  L
Sbjct: 235 GERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R  + D      +   +P  W  +E + + +F+  SD W +GVTIWE+ TFG +P
Sbjct: 160 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           + G+   +I   +++ GERLP+P  C ++VY +M +CW  +   RPKF  L     R+ 
Sbjct: 220 YDGIPTREIPDLLEK-GERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 277

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 178 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 238 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R  + D      +   +P  W  +E + + +F+  SD W +GVTIWE+ TFG +P
Sbjct: 183 DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           + G+   +I   +++ GERLP+P  C ++VY +M +CW  +   RPKF  L     R+ 
Sbjct: 243 YDGIPTREIPDLLEK-GERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 300

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 147 ADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVP 206
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+N  ++L++++R G R+P P+ CP+ ++ LM  CW K+P ERP F  L+  L
Sbjct: 207 YPGMNNREVLEQVER-GYRMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFL 260

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 167 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 226
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  +  LMR CW  NP  RP F
Sbjct: 227 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSF 274

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G  
Sbjct: 190 DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  ++   +++ +D EG RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 250 PYWEMSNQDVIKAVD-EGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 2/119 (1%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D      +   +P  W  +ES+   +F+  SD W +GVT+WE+ TFGA+P
Sbjct: 162 DFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKP 221
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           + G+   +I   +++ GERLP+P  C ++VY +M +CW  +   RP+F  L     R+ 
Sbjct: 222 YDGIPAREIPDLLEK-GERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFSRMA 279

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMM-RYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+      +D  ++      P  W  +ES+   +++  SD W +GVT+WE+ TFGAE
Sbjct: 157 ADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAE 216
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ GL   ++   +++ GERL +P+ C ++VY +M +CW  +   RP F  L +   R+ 
Sbjct: 217 PYAGLRLAEVPDLLEK-GERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 67/120 (55%), Gaps = 2/120 (1%)
Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+      +D  ++      P  W  +ES+   +++  SD W +GVT+WE+ TFGAE
Sbjct: 175 ADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAE 234
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ GL   ++   +++ GERL +P+ C ++VY +M +CW  +   RP F  L +   R+ 
Sbjct: 235 PYAGLRLAEVPDLLEK-GERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 293

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D    T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 259 PYPGIP-VEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 2/119 (1%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   N D    T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 259 PYPGI-PVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D      +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 174 GDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 233
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F
Sbjct: 234 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 281

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D      +  LP  W   ESLK   F+ +SD W FGV +WE+ +   +
Sbjct: 169 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 228
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKDCL 175
           P+ GL+  Q+L K   +G  L +P+ CP  V  LMR CW  NP  RP F    + LKD L
Sbjct: 229 PYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 287
Query: 176 YRLTPAV 182
           +   P V
Sbjct: 288 HPSFPEV 294

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D      +  LP  W   ESLK   F+ +SD W FGV +WE+ +   +
Sbjct: 172 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKDCL 175
           P+ GL+  Q+L K   +G  L +P+ CP  V  LMR CW  NP  RP F    + LKD L
Sbjct: 232 PYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
Query: 176 YRLTPAV 182
           +   P V
Sbjct: 291 HPSFPEV 297

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/127 (40%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 61  GDFGMMRYSQNDCYVMTERKPL-PCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R      Y     K L P  W   ESLK   F+ +SD W FGV +WE+ +   +
Sbjct: 172 GDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKDCL 175
           P+ GL+  Q+L K   +G  L +P+ CP  V  LMR CW  NP  RP F    + LKD L
Sbjct: 232 PYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 290
Query: 176 YRLTPAV 182
           +   P V
Sbjct: 291 HPSFPEV 297

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 87.4 bits (215), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 62  DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R+ +ND  YV+     LP  W   ES+ +  ++  SD W +G+ +WE+F+ G+ P
Sbjct: 211 DFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+       K+ +EG R+  PE  P E+Y +M+ CW  +P +RP F  +
Sbjct: 271 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 87.0 bits (214), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D      +  LP  W   ESLK   F+ +SD W FGV +WE+ +   +
Sbjct: 172 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF----STLKDCL 175
           P+ GL+  Q+L K   +G  L +P+ CP  V  LMR CW  NP  RP F    + LKD L
Sbjct: 232 PYQGLSNEQVL-KFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDL 290
Query: 176 YRLTPAV 182
           +   P V
Sbjct: 291 HPSFPEV 297

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
Query: 61  GDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   + D    T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 192 ADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 251
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+  ++ L K+ +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R  
Sbjct: 252 PYPGVP-VEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR-- 308
Query: 180 PAVMKATQNCHEID 193
             ++  T N   +D
Sbjct: 309 --IVALTSNQEXLD 320

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 62  DFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R   + D YV   +  +P  W  +ESL  + ++  SD W FGV +WE+ T G  P
Sbjct: 193 DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   ++   + + G R+ RP+ C  E+Y LM QCW + P +RP F+ +   L ++
Sbjct: 253 YPGIPPERLFNLL-KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++    F+  SD W FG+ ++E+ T+G  P
Sbjct: 152 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G     ++  +  +G R+PR E CP E+Y +M+ CW +   ERP F  L+  L
Sbjct: 212 YPGRTNADVMTALS-QGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 265

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 2/115 (1%)
Query: 62  DFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           D G+ R     D Y +     LP  W   E++ + +FS  SD W +GV +WE+F++G +P
Sbjct: 171 DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G +   +++ I R  + LP P+ CP  VYALM +CW++ P+ RP+F  +   L
Sbjct: 231 YCGYSNQDVVEMI-RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 66/116 (56%), Gaps = 2/116 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            D G+ R     D Y +     LP  W   E++ + +FS  SD W +GV +WE+F++G +
Sbjct: 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQ 246
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           P+ G +   +++ I R  + LP P+ CP  VYALM +CW++ P+ RP+F  +   L
Sbjct: 247 PYCGYSNQDVVEMI-RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 301

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 45/109 (41%), Positives = 59/109 (54%), Gaps = 2/109 (1%)
Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R   + D      +  LP  W   ESLK   F+  SD W FGV +WE+ T   +
Sbjct: 165 GDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQ 224
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
           P+ GL+  Q+L+ +  EG  L +P+ CP  +  LMR CW  NP  RP F
Sbjct: 225 PYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSF 272

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ RY  +D Y  +     P  W P E L +++FS  SD W FGV +WE+++ G  P
Sbjct: 147 SDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +      +  + I  +G RL RP     +VY +M  CW +   ERP F  L
Sbjct: 207 YERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 256

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ R  ++D      T    +P  W   E++   +F+ ASD W +G+ +WE+ ++G  
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGER 226
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+  +    +++ ++ EG RLP P  CP  +Y LM  CW K    RPKF  + + L +L
Sbjct: 227 PYWEMTNQDVIKAVE-EGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 85.5 bits (210), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ RY  +D Y  +     P  W P E L +++FS  SD W FGV +WE+++ G  P
Sbjct: 142 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 201
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +      +  + I  +G RL RP     +VY +M  CW +   ERP F  L
Sbjct: 202 YERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 251

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ RY  +D Y  +     P  W P E L +++FS  SD W FGV +WE+++ G  P
Sbjct: 146 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 205
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +      +  + I  +G RL RP     +VY +M  CW +   ERP F  L
Sbjct: 206 YERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 255

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 62  DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R  +ND  YV+     LP  W   ES+ +  ++  SD W +G+ +WE+F+ G+ P
Sbjct: 188 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+       K+ +EG R+  PE  P E+Y +M+ CW  +P +RP F  +
Sbjct: 248 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ RY  +D Y  +     P  W P E L +++FS  SD W FGV +WE+++ G  P+
Sbjct: 154 DFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 213
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
                 +  + I  +G RL RP     +VY +M  CW +   ERP F  L
Sbjct: 214 ERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 262

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ RY  +D Y  +     P  W P E L +++FS  SD W FGV +WE+++ G  P+
Sbjct: 163 DFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
                 +  + I  +G RL RP     +VY +M  CW +   ERP F  L
Sbjct: 223 ERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 271

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ RY  +D Y  +     P  W P E L +++FS  SD W FGV +WE+++ G  P
Sbjct: 147 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 206
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           +      +  + I  +G RL RP     +VY +M  CW +   ERP F  L
Sbjct: 207 YERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 256

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 62  DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R  +ND  YV+     LP  W   ES+ +  ++  SD W +G+ +WE+F+ G+ P
Sbjct: 206 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 265
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+       K+ +EG R+  PE  P E+Y +M+ CW  +P +RP F  +
Sbjct: 266 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 316

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM RY  +D YV +     P  W   E   + ++S  SD W FG+ +WE+F+ G  P+
Sbjct: 147 DFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
                 +++ K+  +G RL RP      +Y +M  CW + P +RP F  L
Sbjct: 207 DLYTNSEVVLKVS-QGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQL 255

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 62  DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R  +ND  YV+     LP  W   ES+ +  ++  SD W +G+ +WE+F+ G+ P
Sbjct: 211 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 270
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+       K+ +EG R+  PE  P E+Y +M+ CW  +P +RP F  +
Sbjct: 271 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 321

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 85.1 bits (209), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Query: 62  DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R  +ND  YV+     LP  W   ES+ +  ++  SD W +G+ +WE+F+ G+ P
Sbjct: 204 DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSP 263
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           + G+       K+ +EG R+  PE  P E+Y +M+ CW  +P +RP F  +
Sbjct: 264 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 314

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 84.7 bits (208), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ +  YS  D Y       +P  W  +ESL    ++  SD W FGVT+WE+ T G 
Sbjct: 189 ADFGLSKKIYS-GDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGM 247
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+ G+   ++   +   G RL +PE C  E+Y +M  CW  +P +RP FS L+  L +L
Sbjct: 248 TPYPGVQNHEMYDYL-LHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306
Query: 179 TPAV 182
             ++
Sbjct: 307 LESL 310

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++    F+  S+ W FG+ ++E+ T+G  P
Sbjct: 151 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G     ++  +  +G R+PR E CP E+Y +M+ CW +   ERP F  L+  L
Sbjct: 211 YPGRTNADVMSALS-QGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQSVL 264

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R               P  W   E++    F+  SD W FG+ + E+ T+G  P
Sbjct: 320 ADFGLARVGAK----------FPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++  ++++ ++R G R+PRPE CP E+Y +M +CW   P ERP F  ++  L
Sbjct: 370 YPGMSNPEVIRALER-GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVL 423

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 62  DFGMMRYSQNDC----YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
           DFG+ R+ ++D     Y       +P  W   E++++ +F+ ASD W +G+ +WE+ ++G
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
             P+  +    ++  I+++  RLP P  CP  ++ LM  CW K+   RPKF  + + L +
Sbjct: 238 ERPYWDMTNQDVINAIEQD-YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 296
Query: 178 L--TPAVMKA 185
           +   P  +KA
Sbjct: 297 MIRNPNSLKA 306

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 83.6 bits (205), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 62  DFGMMRYSQNDC----YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
           DFG+ R+ ++D     Y       +P  W   E++++ +F+ ASD W +G+ +WE+ ++G
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 211
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
             P+  +    ++  I+++  RLP P  CP  ++ LM  CW K+   RPKF  + + L +
Sbjct: 212 ERPYWDMTNQDVINAIEQD-YRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK 270
Query: 178 LT--PAVMKA 185
           +   P  +KA
Sbjct: 271 MIRNPNSLKA 280

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 62  DFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R   + D  V   +  +P  W  +ESL  + ++  SD W FGV +WE+ T G  P
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   ++   + + G R+ RP+ C  E+Y LM QCW + P +RP F+ +   L ++
Sbjct: 253 YPGIPPERLFNLL-KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 156 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 216 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 156 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 216 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM R+  +D Y  +     P  W   E    +++S  SD W FGV +WE+F+ G  P+
Sbjct: 146 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
              +  ++++ I   G RL +P      VY +M  CW + P +RP FS L
Sbjct: 206 ENRSNSEVVEDIST-GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 254

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 62  DFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R   + D  V   +  +P  W  +ESL  + ++  SD W FGV +WE+ T G  P
Sbjct: 193 DFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   ++   + + G R+ RP+ C  E+Y LM QCW + P +RP F+ +   L ++
Sbjct: 253 YPGIPPERLFNLL-KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 156 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 216 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 156 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 216 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 147 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 206
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 207 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 260

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM R+  +D Y  +     P  W   E    +++S  SD W FGV +WE+F+ G  P+
Sbjct: 146 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 205
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
              +  ++++ I   G RL +P      VY +M  CW + P +RP FS L
Sbjct: 206 ENRSNSEVVEDIST-GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 254

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 405 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 465 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 518

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM R+  +D Y  +     P  W   E    +++S  SD W FGV +WE+F+ G  P+
Sbjct: 144 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 203
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
              +  ++++ I   G RL +P      VY +M  CW + P +RP FS L
Sbjct: 204 ENRSNSEVVEDIST-GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 252

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 145 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 205 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 258

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 156 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 216 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 156 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 216 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 156 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 216 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 322 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 382 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 323 ADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 382
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 383 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 436

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 322 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 382 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM R+  +D Y  +     P  W   E    +++S  SD W FGV +WE+F+ G  P+
Sbjct: 166 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 225
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
              +  ++++ I   G RL +P      VY +M  CW + P +RP FS L
Sbjct: 226 ENRSNSEVVEDIST-GFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRL 274

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 322 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 382 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 153 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 213 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 266

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM R+  +D Y  +     P  W   E    +++S  SD W FGV +WE+F+ G  P+
Sbjct: 147 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 206
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
              +  ++++ I   G RL +P      VY +M  CW + P +RP FS L
Sbjct: 207 ENRSNSEVVEDIST-GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRL 255

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 149 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 208
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 209 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 262

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFGM R+  +D Y  +     P  W   E    +++S  SD W FGV +WE+F+ G  P+
Sbjct: 149 DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY 208
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
              +  ++++ I   G RL +P      VY +M  CW + P +RP FS L
Sbjct: 209 ENRSNSEVVEDIST-GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRL 257

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 175 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 235 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 174 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 234 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 286

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 175 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 235 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 170 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 229
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 230 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 282

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 193 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 252
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 253 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 305

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 172 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 231
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 232 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 284

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 173 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 232
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 233 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 285

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 194 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 253
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 254 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 306

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 167 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 226
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 227 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 279

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 62  DFGMMRY----SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
           DFG+ R+    S +  Y  +    +P  W   E++   +F+ ASDAW +G+ +WE+ +FG
Sbjct: 159 DFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 218
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
             P+  ++   ++  I+++  RLP P  CP  ++ LM  CW K+   RP+F  +   L +
Sbjct: 219 ERPYWDMSNQDVINAIEQD-YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 277
Query: 178 LT--PAVMK 184
           +   PA +K
Sbjct: 278 MIRNPASLK 286

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Query: 62  DFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R   +N  YV      LP  W   ES+    +S  SD W +GV +WE+F+ G  P
Sbjct: 242 DFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP 301
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   +      REG R+  PE    E+Y +M  CW ++P ERP+F+ L + L
Sbjct: 302 YPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ RY  +D    +     P  W P E L +++FS  SD W FGV +WE+++ G  P+
Sbjct: 163 DFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPY 222
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
                 +  + I  +G RL RP     +VY +M  CW +   ERP F  L
Sbjct: 223 ERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKIL 271

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 81.6 bits (200), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 62  DFGMMRYSQNDCYVMTERKPL----PCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
           DFG+ R+ + +    TE   L    P  W   E++   +F+ ASDAW +G+ +WE+ +FG
Sbjct: 161 DFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFG 220
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
             P+  ++   ++  I+++  RLP P  CP  ++ LM  CW K+   RP+F  +   L +
Sbjct: 221 ERPYWDMSNQDVINAIEQD-YRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDK 279
Query: 178 L--TPAVMK 184
           +   PA +K
Sbjct: 280 MIRNPASLK 288

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 62  DFGM---MRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           DFG+   +R  +N     T  K  P  W   E + + +FS  SD W FGV +WE F++G 
Sbjct: 154 DFGLSKALRADENXYKAQTHGK-WPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 212
Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           +P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 213 KPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 265

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 61  GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFG+ R   ND  Y++     LP  W   ES+    ++  SD W +G+ +WE+F+ G  
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+ G+       K+ ++G ++ +P   P  +Y++M+ CW+  P  RP F  +
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 61  GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFG+ R   ND  Y++     LP  W   ES+    ++  SD W +G+ +WE+F+ G  
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+ G+       K+ ++G ++ +P   P  +Y++M+ CW+  P  RP F  +
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 61  GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFG+ R   ND  Y++     LP  W   ES+    ++  SD W +G+ +WE+F+ G  
Sbjct: 194 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 253
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+ G+       K+ ++G ++ +P   P  +Y++M+ CW+  P  RP F  +
Sbjct: 254 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 61  GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFG+ R   ND  Y++     LP  W   ES+    ++  SD W +G+ +WE+F+ G  
Sbjct: 202 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 261
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+ G+       K+ ++G ++ +P   P  +Y++M+ CW+  P  RP F  +
Sbjct: 262 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 61  GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFG+ R   ND  Y++     LP  W   ES+    ++  SD W +G+ +WE+F+ G  
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 267
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+ G+       K+ ++G ++ +P   P  +Y++M+ CW+  P  RP F  +
Sbjct: 268 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  + D   Y        P  W   E + + +FS  SD W FGV +WE F++G +
Sbjct: 512 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 571
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 572 PYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 623

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  + D   Y        P  W   E + + +FS  SD W FGV +WE F++G +
Sbjct: 513 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 572
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 573 PYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 624

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 61  GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFG+ R   ND  Y++     LP  W   ES+    ++  SD W +G+ +WE+F+ G  
Sbjct: 200 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 259
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           P+ G+       K+ ++G ++ +P   P  +Y++M+ CW+  P  RP F  +
Sbjct: 260 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 311

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  + D   Y        P  W   E + + +FS  SD W FGV +WE F++G +
Sbjct: 148 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 207
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 208 PYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 259

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  + D   Y        P  W   E + + +FS  SD W FGV +WE F++G +
Sbjct: 150 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 209
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 210 PYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 261

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  + D   Y        P  W   E + + +FS  SD W FGV +WE F++G +
Sbjct: 154 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 213
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 214 PYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 265

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  + D   Y        P  W   E + + +FS  SD W FGV +WE F++G +
Sbjct: 168 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 227
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 228 PYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 279

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  + D   Y        P  W   E + + +FS  SD W FGV +WE F++G +
Sbjct: 170 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 230 PYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 281

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  + D   Y        P  W   E + + +FS  SD W FGV +WE F++G +
Sbjct: 170 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 229
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 230 PYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 281

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 80.5 bits (197), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Query: 62  DFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +  + D   Y        P  W   E + + +FS  SD W FGV +WE F++G +
Sbjct: 160 DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQK 219
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
           P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++
Sbjct: 220 PYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 271

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRYS--QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
            DFG+ +      D YV+ E    P  W   ESL  N FS+ SD W FGV ++E+FT+  
Sbjct: 156 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 215
Query: 117 -----GAEPWVGLNGMQILQKIDRE------GERLPRPEACPVEVYALMRQCWSKNPAER 165
                 AE    +   + +  + R       G+RLP P ACP EV+ LM+ CW+ +P +R
Sbjct: 216 KSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDR 275
Query: 166 PKFSTL 171
           P FS L
Sbjct: 276 PSFSAL 281

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ +   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 153 ADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 212
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 213 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 266

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 80.1 bits (196), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 156 ADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 215
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K+P ERP F  L+  L
Sbjct: 216 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAFL 269

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  +     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 173 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 232
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 233 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 285

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  +     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 180 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 239
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 240 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 292

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 212 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 266 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 322

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 192 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 246 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 302

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  +     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 235 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 186 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 240 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 186 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 240 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  +     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 235 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 287

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  +     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 176 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 235
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 236 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 288

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 61  GDFGMMR--YSQNDCYVMTER-KPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R  Y +    V  +    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 174 ADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 234 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 286

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 226 GDFGMARDIYRAGYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 280 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 336

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  +     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 176 ADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 235
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 236 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 288

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 203 GDFGMARDIYRAGYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 257 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 313

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 4/114 (3%)
Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  +     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 293
Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L
Sbjct: 294 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 346

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 202 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 256 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 312

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 200 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 254 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 200 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 254 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 200 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 254 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 310

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++     +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 146 ADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 205
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 206 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 259

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 185 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 239 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 177 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 231 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 287

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM R       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 185 GDFGMARDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 239 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRYS--QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
            DFG+ +      D YV+ E    P  W   ESL  N FS+ SD W FGV ++E+FT+  
Sbjct: 169 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 228
Query: 117 -----GAEPWVGLNGMQILQKIDRE------GERLPRPEACPVEVYALMRQCWSKNPAER 165
                 AE    +   + +  + R       G+RLP P ACP EV+ LM+ CW+ +P +R
Sbjct: 229 KSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDR 288
Query: 166 PKFSTL 171
           P FS L
Sbjct: 289 PSFSAL 294

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ + + +      +   LP  W   E+L+  +FS  SD W FG+ +WE+++FG  P+
Sbjct: 332 DFGLTKEASS----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 387
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
             +    ++ ++++ G ++  P+ CP  VY +M+ CW  + A RP F  L++ L
Sbjct: 388 PRIPLKDVVPRVEK-GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQL 440

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 187 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 247 YPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
Query: 181 A 181
           A
Sbjct: 307 A 307

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 14/118 (11%)
Query: 61  GDFGMMR-------YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEM 113
           GDFGM +       Y +  C +      LP  W P E+     F+  +D W FGV +WE+
Sbjct: 186 GDFGMAQDIYRASYYRKGGCAM------LPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
           F+ G  P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ +
Sbjct: 240 FSLGYMPYPSKSNQEVLEFVT-SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 296

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRYS--QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ +      D YV+ E    P  W   ESL  N FS+ SD W FGV ++E+FT+  
Sbjct: 157 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 216
Query: 119 EPWVGLNGMQILQKIDRE-------------GERLPRPEACPVEVYALMRQCWSKNPAER 165
           +          +   +R+             G+RLP P ACP EV+ LM+ CW+ +P +R
Sbjct: 217 KSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDR 276
Query: 166 PKFSTL 171
           P FS L
Sbjct: 277 PSFSAL 282

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ + + +      +   LP  W   E+L+  +FS  SD W FG+ +WE+++FG  P+
Sbjct: 160 DFGLTKEASS----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
             +    ++ ++++ G ++  P+ CP  VY +M+ CW  + A RP F  L++ L
Sbjct: 216 PRIPLKDVVPRVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 268

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 216 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 274
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 275 QRPSFRDL 282

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 5/114 (4%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ + + +      +   LP  W   E+L+  +FS  SD W FG+ +WE+++FG  P+
Sbjct: 145 DFGLTKEASS----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
             +    ++ ++++ G ++  P+ CP  VY +M+ CW  + A RP F  L++ L
Sbjct: 201 PRIPLKDVVPRVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 253

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 77.4 bits (189), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D   Y + E    P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 157 GDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 216
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 217 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 275
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 276 QRPSFRDL 283

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +     ++ Y + E    P  W   E LK  +F  ASD W FGVT++E+ T   
Sbjct: 176 GDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD 235
Query: 117 -GAEP------WVGLNGMQI----LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
               P       +G+   Q+    L ++   GERLPRP+ CP EVY LM+ CW    + R
Sbjct: 236 SSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFR 295
Query: 166 PKFSTL 171
           P F  L
Sbjct: 296 PTFENL 301

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 216 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 274
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 275 QRPSFRDL 282

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 216 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 274
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 275 QRPSFRDL 282

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 219 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 277
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 278 QRPSFRDL 285

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 219 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 277
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 278 QRPSFRDL 285

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 155 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 214
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 215 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 273
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 274 QRPSFRDL 281

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 233
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 234 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 292
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 293 QRPSFRDL 300

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 233
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 234 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 292
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 293 QRPSFRDL 300

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 77.0 bits (188), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 161 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 220
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 221 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 279
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 280 QRPSFRDL 287

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 154 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 213
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 214 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 272
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 273 QRPSFRDL 280

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 163 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 222
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 223 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 281
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 282 QRPSFRDL 289

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 160 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 219
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 220 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 278
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 279 QRPSFRDL 286

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 218
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 219 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 277
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 278 QRPSFRDL 285

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 162 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 221
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 222 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 280
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 281 QRPSFRDL 288

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 62  DFGMMRYSQNDCYVMTERKP--LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +    D    T R     P  W   E +   +FS  SD W +GVT+WE  ++G +
Sbjct: 153 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 212
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFST----LKDCL 175
           P+  + G +++  I+ +G+R+  P  CP E+YALM  CW     +RP F T    ++ C 
Sbjct: 213 PYKKMKGPEVMAFIE-QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271
Query: 176 YRLTPAV 182
           Y L   V
Sbjct: 272 YSLASKV 278

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 77.0 bits (188), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 18/128 (14%)
Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP--WCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +    D      ++P   P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 187 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 246
Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ +   G RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 247 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNG-RLPRPDGCPDEIYMIMTECWNNNVN 305
Query: 164 ERPKFSTL 171
           +RP F  L
Sbjct: 306 QRPSFRDL 313

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 7/127 (5%)
Query: 62  DFGMMRYSQNDCYVMTERKP--LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           DFG+ +    D    T R     P  W   E +   +FS  SD W +GVT+WE  ++G +
Sbjct: 479 DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQK 538
Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFST----LKDCL 175
           P+  + G +++  I+ +G+R+  P  CP E+YALM  CW     +RP F T    ++ C 
Sbjct: 539 PYKKMKGPEVMAFIE-QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 597
Query: 176 YRLTPAV 182
           Y L   V
Sbjct: 598 YSLASKV 604

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+ +     ++ Y + E    P  W   E LK  +F  ASD W FGVT++E+ T   
Sbjct: 159 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD 218
Query: 119 EP---------WVGLNGMQI----LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
                       +G+   Q+    L ++   GERLPRP+ CP EVY LM+ CW    + R
Sbjct: 219 SSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFR 278
Query: 166 PKFSTL 171
           P F  L
Sbjct: 279 PTFENL 284

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/126 (35%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+ +     ++ Y + E    P  W   E LK  +F  ASD W FGVT++E+ T   
Sbjct: 159 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD 218
Query: 119 EP---------WVGLNGMQI----LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
                       +G+   Q+    L ++   GERLPRP+ CP EVY LM+ CW    + R
Sbjct: 219 SSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFR 278
Query: 166 PKFSTL 171
           P F  L
Sbjct: 279 PTFENL 284

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 63/114 (55%), Gaps = 5/114 (4%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ + + +      +   LP  W   E+L+   FS  SD W FG+ +WE+++FG  P+
Sbjct: 151 DFGLTKEASS----TQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
             +    ++ ++++ G ++  P+ CP  VY +M+ CW  + A RP F  L++ L
Sbjct: 207 PRIPLKDVVPRVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQL 259

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 241 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 301 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 360
Query: 181 A 181
           A
Sbjct: 361 A 361

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 243 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 303 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 362
Query: 181 A 181
           A
Sbjct: 363 A 363

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 234 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 294 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 353
Query: 181 A 181
           A
Sbjct: 354 A 354

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 236 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 296 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355
Query: 181 A 181
           A
Sbjct: 356 A 356

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 187 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 246
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 247 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 306
Query: 181 A 181
           A
Sbjct: 307 A 307

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 228 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 287
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 288 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 347
Query: 181 A 181
           A
Sbjct: 348 A 348

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 193 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 252
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 253 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 312
Query: 181 A 181
           A
Sbjct: 313 A 313

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 181 A 181
           A
Sbjct: 302 A 302

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 182 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 181 A 181
           A
Sbjct: 302 A 302

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 191 DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 181 A 181
           A
Sbjct: 311 A 311

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +     ++ Y + E    P  W   E LK  +F  ASD W FGVT++E+ T+  
Sbjct: 153 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCD 212
Query: 117 -------GAEPWVGLNGMQI----LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
                       +G    Q+    L ++   GERLPRP+ CP E+Y LM+ CW    + R
Sbjct: 213 SNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFR 272
Query: 166 PKFSTL 171
           P F  L
Sbjct: 273 PTFQNL 278

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +     ++ Y + E    P  W   E LK  +F  ASD W FGVT++E+ T+  
Sbjct: 154 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCD 213
Query: 117 -------GAEPWVGLNGMQI----LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
                       +G    Q+    L ++   GERLPRP+ CP E+Y LM+ CW    + R
Sbjct: 214 SNQSPHTKFTELIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFR 273
Query: 166 PKFSTL 171
           P F  L
Sbjct: 274 PTFQNL 279

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 74.7 bits (182), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 62/126 (49%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRYS--QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ +      D  V+ E    P  W   ESL  N FS+ SD W FGV ++E+FT+  
Sbjct: 153 ADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 212
Query: 119 EPWVGLNGMQILQKIDRE-------------GERLPRPEACPVEVYALMRQCWSKNPAER 165
           +          +   +R+             G+RLP P ACP EV+ LM+ CW+ +P +R
Sbjct: 213 KSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDR 272
Query: 166 PKFSTL 171
           P FS L
Sbjct: 273 PSFSAL 278

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D   V      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 181 A 181
           A
Sbjct: 311 A 311

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D   V      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 181 A 181
           A
Sbjct: 311 A 311

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D   V      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 191 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 181 A 181
           A
Sbjct: 311 A 311

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D   V      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 181 A 181
           A
Sbjct: 302 A 302

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D   V      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 182 DFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 241
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 242 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 301
Query: 181 A 181
           A
Sbjct: 302 A 302

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 62  DFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R   +D  YV+     LP  W   ESL    ++  SD W +G+ +WE+F+ G  P
Sbjct: 215 DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNP 274
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+       K+ + G ++ +P     E+Y +M+ CW+ +  +RP F  L   L
Sbjct: 275 YPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 62  DFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ R    D   V      LP  W   E++    ++  SD W FGV +WE+F+ GA P
Sbjct: 191 DFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L  
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310
Query: 181 A 181
           A
Sbjct: 311 A 311

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRYSQNDCYVMTER--KPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+ +  + D    T +  +  P  W   E L  ++F  ASD W FGVT+ E+ T+  
Sbjct: 168 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227
Query: 119 E-------------PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
                         P  G   +  L    +EG+RLP P  CP EVY LMR+CW   P+ R
Sbjct: 228 SDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNR 287
Query: 166 PKFSTL 171
             F  L
Sbjct: 288 TSFQNL 293

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 61  GDFGMMRYSQNDCYVMTER--KPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+ +  + D    T +  +  P  W   E L  ++F  ASD W FGVT+ E+ T+  
Sbjct: 156 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 215
Query: 119 E-------------PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
                         P  G   +  L    +EG+RLP P  CP EVY LMR+CW   P+ R
Sbjct: 216 SDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNR 275
Query: 166 PKFSTL 171
             F  L
Sbjct: 276 TSFQNL 281

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 86  WCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEA 145
           W   E ++ + FS+ SD W +GV +WE+ T G  P+ G++G+ +   +      LP P  
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVAYGVAMNKLALPIPST 238
Query: 146 CPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           CP     LM  CW+ +P  RP F+ + D L
Sbjct: 239 CPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 63.9 bits (154), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ R   +  ++ ++       W   E L+    ++ SD + FGV +WE+ T   +PW
Sbjct: 182 DFGLSRLKAS-TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPW 239
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA 181
             LN  Q++  +  + +RL  P     +V A++  CW+  P +RP F+T+ D L  L  +
Sbjct: 240 GNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
Query: 182 VM 183
            +
Sbjct: 300 AV 301

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 2/122 (1%)
Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG+ R   +  ++ ++       W   E L+    ++ SD + FGV +WE+ T   +PW
Sbjct: 182 DFGLSRLKAS-XFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATL-QQPW 239
Query: 122 VGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA 181
             LN  Q++  +  + +RL  P     +V A++  CW+  P +RP F+T+ D L  L  +
Sbjct: 240 GNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299
Query: 182 VM 183
            +
Sbjct: 300 AV 301

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 99  QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCW 158
           +++D W F V +WE+ T    P+  L+ M+I  K+  EG R   P      V  LM+ C 
Sbjct: 190 RSADMWSFAVLLWELVTREV-PFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICM 248
Query: 159 SKNPAERPKFSTLKDCLYRL 178
           +++PA+RPKF  +   L ++
Sbjct: 249 NEDPAKRPKFDMIVPILEKM 268

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 85  PWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP 143
           PW P E +++    + A+D W FG T+WE+ + G +P   L+  + LQ  + +  +LP P
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQLPAP 240
Query: 144 EACPVEVYALMRQCWSKNPAERPKF-STLKDCLYRLTPAVM 183
           +A   E+  L+  C    P  RP F + ++D     TP ++
Sbjct: 241 KAA--ELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 50.8 bits (120), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 85  PWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP 143
           PW P E +++    + A+D W FG T+WE+ + G +P   L+  + LQ  + +  +LP P
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQLPAP 240
Query: 144 EACPVEVYALMRQCWSKNPAERPKF-STLKDCLYRLTPAVM 183
           +A   E+  L+  C    P  RP F + ++D     TP ++
Sbjct: 241 KAA--ELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score = 47.0 bits (110), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 99  QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCW 158
           +++D W F V +WE+ T    P+  L+  +I  K+  EG R   P      V  L + C 
Sbjct: 190 RSADXWSFAVLLWELVTREV-PFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICX 248
Query: 159 SKNPAERPKFSTLKDCLYR 177
           +++PA+RPKF  +   L +
Sbjct: 249 NEDPAKRPKFDXIVPILEK 267

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 86  WCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW--VGLNGMQILQKIDREGERLPRP 143
           W   E  + + +S+  D + +G+ +WE+ T   +P+  +G    +I+  +   G R P  
Sbjct: 170 WMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAV-HNGTRPPLI 227
Query: 144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +  P  + +LM +CWSK+P++RP    +   +  L
Sbjct: 228 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 44.3 bits (103), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 86  WCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW--VGLNGMQILQKIDREGERLPRP 143
           W   E  + + +S+  D + +G+ +WE+ T   +P+  +G    +I+  +   G R P  
Sbjct: 169 WMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAV-HNGTRPPLI 226
Query: 144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +  P  + +LM +CWSK+P++RP    +   +  L
Sbjct: 227 KNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 97  FSQASDAWMFGVTIWEMFTFGAEPW--VGLNGMQILQKIDREGERLPRPEACPVEVYALM 154
           +++ +D + F + ++ + T G  P+       ++ +  I  EG R   PE CP  +  ++
Sbjct: 205 YTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVI 263
Query: 155 RQCWSKNPAERPKFSTLKDCLYRL 178
             CWS +P +RP FS +   L  L
Sbjct: 264 ELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 97  FSQASDAWMFGVTIWEMFTFGAEPW--VGLNGMQILQKIDREGERLPRPEACPVEVYALM 154
           +++ +D + F + ++ + T G  P+       ++ +  I  EG R   PE CP  +  ++
Sbjct: 205 YTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVI 263
Query: 155 RQCWSKNPAERPKFSTLKDCLYRL 178
             CWS +P +RP FS +   L  L
Sbjct: 264 ELCWSGDPKKRPHFSYIVKELSEL 287

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 43.1 bits (100), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 97  FSQASDAWMFGVTIWEMFTFGAEPW--VGLNGMQILQKIDREGERLPRPEACPVEVYALM 154
           +++ +D + F + ++ + T G  P+       ++ +  I  EG R   PE CP  +  ++
Sbjct: 205 YTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVI 263
Query: 155 RQCWSKNPAERPKFSTLKDCLYRL 178
             CWS +P +RP FS +   L  L
Sbjct: 264 ELCWSGDPKKRPHFSYIVKELSEL 287

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	251
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	1e-56
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-51
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-50
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-49
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	1e-49
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	5e-49
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	4e-48
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	7e-48
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-45
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-45
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-45
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-45
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	5e-45
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-45
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-44
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-43
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-43
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	3e-43
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	7e-43
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	1e-42
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-42
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-42
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-42
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	5e-42
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	1e-41
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	1e-41
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-41
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-41
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	3e-41
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-41
4aoj_A	329	High affinity nerve growth factor receptor; transf	4e-41
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	5e-41
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	6e-41
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-41
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	7e-41
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	1e-40
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-40
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	5e-40
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	5e-40
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	1e-39
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-39
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	2e-39
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-39
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-39
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-38
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-38
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-38
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-38
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	5e-38
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-37
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	4e-37
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	9e-36
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-34
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	3e-31
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-28
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	4e-25
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-25
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-23
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-23
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-22
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	4e-22
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-21
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	7e-11
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-10
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	2e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	4e-10
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	4e-10
3q4u_A	301	Activin receptor type-1; structural genomics conso	4e-10
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	8e-10
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-09
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	5e-09
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	8e-09
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	3e-08
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-08
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	7e-08
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	8e-08
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-07
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-07
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	3e-07
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	3e-07
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	4e-07
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	4e-07
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	5e-07
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	5e-07
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	6e-07
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	6e-07
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	7e-07
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	1e-06
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	1e-06
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	2e-06
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	2e-06
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	2e-06
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	2e-06
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	2e-06
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	3e-06
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	3e-06
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	3e-06
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	3e-06
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-06
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	4e-06
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	4e-06
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	5e-06
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	5e-06
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	6e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	9e-06
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	9e-06
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	9e-06
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-05
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	2e-05
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	2e-05
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	2e-05
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	2e-05
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	3e-05
1awj_A	77	ITK; transferase, regulatory intramolecular comple	4e-05
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	4e-05
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	5e-05
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	5e-05
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	5e-05
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	5e-05
2a19_B	284	Interferon-induced, double-stranded RNA-activated	6e-05
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	6e-05
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	7e-05
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	9e-05
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	9e-05
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	9e-05
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	1e-04
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	1e-04
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	1e-04
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	1e-04
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	1e-04
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	2e-04
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-04
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	2e-04
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-04
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	2e-04
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	2e-04
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	2e-04
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-04
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	3e-04
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	3e-04
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	3e-04
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	3e-04
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	3e-04
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	4e-04
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	4e-04
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	4e-04
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	4e-04
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	4e-04
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	5e-04
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	5e-04
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	5e-04
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	5e-04
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-04
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	6e-04
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	6e-04
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	6e-04
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	7e-04
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	8e-04
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	8e-04
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	9e-04
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	9e-04
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	9e-04

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score =  181 bits (462), Expect = 1e-56
 Identities = 74/127 (58%), Positives = 89/127 (70%), Gaps = 2/127 (1%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+MR     +D YVM E + +P  WC  ESLK   FS ASD WMFGVT+WEMFT+G 
Sbjct: 163 GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQ 222

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           EPW+GLNG QIL KID+EGERLPRPE CP ++Y +M QCW+  P +RP F  L+D L   
Sbjct: 223 EPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282

Query: 179 TPAVMKA 185
            P  M+A
Sbjct: 283 QPTDMRA 289

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score =  170 bits (432), Expect = 1e-51
 Identities = 41/119 (34%), Positives = 68/119 (57%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++
Sbjct: 159 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+   +I   +++ GERLP+P  C ++VY +MR+CW  +   RPKF  L     ++
Sbjct: 219 PYDGIPASEISSILEK-GERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score =  165 bits (421), Expect = 2e-50
 Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 1/118 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY +++ Y       LP  W   ES+   +F+ ASD WMF V +WE+ +FG +P
Sbjct: 155 GDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQP 214

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +  L    ++  +++ G+RLP+P+ CP  +Y LM +CW  +P++RP+F+ L   L  +
Sbjct: 215 FFWLENKDVIGVLEK-GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score =  163 bits (415), Expect = 1e-49
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 3/133 (2%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ +   + +  Y        P  W   E +   +FS  SD W +GVT+WE  ++G 
Sbjct: 152 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 211

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +P+  + G +++  I++ G+R+  P  CP E+YALM  CW     +RP F T++  +   
Sbjct: 212 KPYKKMKGPEVMAFIEQ-GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270

Query: 179 TPAVMKATQNCHE 191
             ++    +  H 
Sbjct: 271 YYSLASKVEGHHH 283

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score =  163 bits (415), Expect = 1e-49
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 3/132 (2%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ +   +  + Y        P  W   E + + +FS  SD W FGV +WE F++G 
Sbjct: 159 SDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 218

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +P+ G+ G ++   +++ GER+  P  CP E+Y LM  CW+ +   RP F+ ++  L   
Sbjct: 219 KPYRGMKGSEVTAMLEK-GERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277

Query: 179 TPAVMKATQNCH 190
              V+    + H
Sbjct: 278 YYDVVNEGHHHH 289

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score =  163 bits (414), Expect = 5e-49
 Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+      +D  ++      P  W  +ES+   +++  SD W +GVT+WE+ TFGAE
Sbjct: 157 ADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAE 216

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ GL   ++   +++ GERL +P+ C ++VY +M +CW  +   RP F  L +   R+
Sbjct: 217 PYAGLRLAEVPDLLEK-GERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score =  160 bits (408), Expect = 4e-48
 Identities = 40/119 (33%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++
Sbjct: 159 TDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK 218

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+   +I   +++ GERLP+P  C ++VY +M +CW  +   RPKF  L     ++
Sbjct: 219 PYDGIPASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score =  158 bits (403), Expect = 7e-48
 Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 1/118 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 158 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 217

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L  +
Sbjct: 218 FQGVKNNDVIGRIEN-GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 274

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score =  159 bits (403), Expect = 2e-45
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 3/117 (2%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ +   + +  Y        P  W   E +   +FS  SD W +GVT+WE  ++G 
Sbjct: 478 SDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQ 537

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           +P+  + G +++  I++ G+R+  P  CP E+YALM  CW     +RP F T++  +
Sbjct: 538 KPYKKMKGPEVMAFIEQ-GKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRM 593

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score =  152 bits (385), Expect = 4e-45
 Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 18/135 (13%)

Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +      + + + E    P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 156 GDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 215

Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ + +   RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 216 KSKSPPAEFMRMIGNDKQGQMIVFHLIELL-KNNGRLPRPDGCPDEIYMIMTECWNNNVN 274

Query: 164 ERPKFSTLKDCLYRL 178
           +RP F  L   + ++
Sbjct: 275 QRPSFRDLALRVDQI 289

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score =  152 bits (387), Expect = 4e-45
 Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 15/133 (11%)

Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ +      D YV+ E    P  W   ESL  N FS+ SD W FGV ++E+FT+  
Sbjct: 169 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 228

Query: 119 EPWVGLNGM-------------QILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER 165
           +                       L ++  EG+RLP P ACP EV+ LM+ CW+ +P +R
Sbjct: 229 KSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDR 288

Query: 166 PKFSTLKDCLYRL 178
           P FS L   L  L
Sbjct: 289 PSFSALGPQLDML 301

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score =  152 bits (386), Expect = 4e-45
 Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 17/134 (12%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+ +     ++ Y + E    P  W   E LK  +F  ASD W FGVT++E+ T   
Sbjct: 176 GDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCD 235

Query: 119 EPWV--------------GLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAE 164
                              +  +++ + +   GERLPRP+ CP EVY LM+ CW    + 
Sbjct: 236 SSQSPPTKFLELIGIAQGQMTVLRLTELL-ERGERLPRPDKCPAEVYHLMKNCWETEASF 294

Query: 165 RPKFSTLKDCLYRL 178
           RP F  L   L  +
Sbjct: 295 RPTFENLIPILKTV 308

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score =  152 bits (387), Expect = 5e-45
 Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 18/135 (13%)

Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTF-- 116
           GDFG+ +      + Y + E    P  W   ESL  ++FS ASD W FGV ++E+FT+  
Sbjct: 187 GDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 246

Query: 117 -------------GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPA 163
                        G +    +    +++ + +   RLPRP+ CP E+Y +M +CW+ N  
Sbjct: 247 KSKSPPAEFMRMIGNDKQGQMIVFHLIELL-KNNGRLPRPDGCPDEIYMIMTECWNNNVN 305

Query: 164 ERPKFSTLKDCLYRL 178
           +RP F  L   + ++
Sbjct: 306 QRPSFRDLALRVDQI 320

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score =  158 bits (402), Expect = 6e-45
 Identities = 47/118 (39%), Positives = 72/118 (61%), Gaps = 1/118 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV +WE+   G +P
Sbjct: 533 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKP 592

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+    ++ +I+  GERLP P  CP  +Y+LM +CW+ +P+ RP+F+ LK  L  +
Sbjct: 593 FQGVKNNDVIGRIEN-GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score =  152 bits (385), Expect = 1e-44
 Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 5/132 (3%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ R      D    T    +P  W   E++    FS ASD W FGV +WE+  +G 
Sbjct: 193 SDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+  +    ++  ++  G RLP P  CP  ++ LM  CW K+ A+RP+FS +   L  L
Sbjct: 253 RPYWNMTNRDVISSVEE-GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311

Query: 179 --TPAVMKATQN 188
             +P  ++AT  
Sbjct: 312 IRSPESLRATAT 323

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score =  146 bits (372), Expect = 2e-43
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFGM RY  +D YV +     P  W   E   + ++S  SD W FG+ +WE+F+ G  P
Sbjct: 146 SDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMP 205

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +      +++ K+ + G RL RP      +Y +M  CW + P +RP F  L   +  L
Sbjct: 206 YDLYTNSEVVLKVSQ-GHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score =  146 bits (371), Expect = 3e-43
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFGM R+  +D Y  +     P  W   E    +++S  SD W FGV +WE+F+ G  P
Sbjct: 146 SDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIP 205

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +   +  ++++ I   G RL +P      VY +M  CW + P +RP FS L   L  +
Sbjct: 206 YENRSNSEVVEDIST-GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score =  149 bits (378), Expect = 3e-43
 Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 5/132 (3%)

Query: 61  GDFGMMRY--SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ R      +    T    +P  W   E++ + +F+ ASD W +G+ +WE+ ++G 
Sbjct: 189 SDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+  ++   +++ +D  G RLP P  CP  +Y LM  CW K+   RPKF  +   L +L
Sbjct: 249 RPYWEMSNQDVIKAVDE-GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307

Query: 179 --TPAVMKATQN 188
              P  +K   +
Sbjct: 308 IRNPGSLKIITS 319

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score =  146 bits (370), Expect = 7e-43
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 5/135 (3%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 153 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 212

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G++  Q+ + +++   R+ RPE CP +VY LMR CW  NP++RP F+ +      +  
Sbjct: 213 YPGIDLSQVYELLEK-DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM-- 269

Query: 181 AVMKATQNCHEIDEE 195
              + +    E+++E
Sbjct: 270 --FQESSISDEVEKE 282

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score =  147 bits (372), Expect = 1e-42
 Identities = 48/120 (40%), Positives = 74/120 (61%), Gaps = 4/120 (3%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ R  YS  D Y       +P  W P ES+ +N+++  SD W +GV +WE+F++G 
Sbjct: 216 ADFGLSRNIYS-ADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGL 274

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +P+ G+   +++  + R+G  L  PE CP+E+Y LMR CWSK PA+RP F ++   L R+
Sbjct: 275 QPYYGMAHEEVIYYV-RDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score =  145 bits (367), Expect = 1e-42
 Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 1/118 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ RY  +D Y  +     P  W P E L +++FS  SD W FGV +WE+++ G  P
Sbjct: 162 SDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP 221

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +      +  + I + G RL RP     +VY +M  CW +   ERP F  L   +  +
Sbjct: 222 YERFTNSETAEHIAQ-GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV 278

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score =  149 bits (377), Expect = 2e-42
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 322 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 382 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 435

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score =  147 bits (372), Expect = 3e-42
 Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 2/120 (1%)

Query: 61  GDFGMMRYSQNDCYVMTE-RKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFGM R   +  Y  +   + +P  W   E+L + ++S  SD W FG+ +WE F+ GA 
Sbjct: 255 SDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGAS 314

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+  L+  Q  + +++ G RLP PE CP  V+ LM QCW+  P +RP FST+   L  + 
Sbjct: 315 PYPNLSNQQTREFVEK-GGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score =  144 bits (366), Expect = 5e-42
 Identities = 51/138 (36%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R     D Y       LP  W  +ESL  N ++  SD W FGVT+WE+ T G  
Sbjct: 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQT 238

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL- 178
           P+ G+   +I   +   G RL +P  C  EVY LM QCWS +P +RP F+ L+  L  + 
Sbjct: 239 PYAGIENAEIYNYL-IGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297

Query: 179 -TPAVMKATQNCHEIDEE 195
              +V+  +Q+   I+ E
Sbjct: 298 GHLSVLSTSQDPLYINIE 315

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score =  143 bits (362), Expect = 1e-41
 Identities = 46/119 (38%), Positives = 66/119 (55%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R     D Y +     LP  W P ES+ + +F+  SD W FGV +WE+FT+G +
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           PW  L+  ++++ I  +G  L RP  CP EVY +M  CW + P +R     +   L+ L
Sbjct: 235 PWFQLSNTEVIECI-TQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHAL 292

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score =  142 bits (361), Expect = 1e-41
 Identities = 42/117 (35%), Positives = 68/117 (58%), Gaps = 4/117 (3%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            D G+ R  Y+  D Y +     LP  W   E++ + +FS  SD W +GV +WE+F++G 
Sbjct: 170 SDLGLFREVYA-ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL 228

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           +P+ G +   +++ I R  + LP P+ CP  VYALM +CW++ P+ RP+F  +   L
Sbjct: 229 QPYCGYSNQDVVEMI-RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRL 284

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score =  143 bits (362), Expect = 1e-41
 Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 17/134 (12%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFG+ +   +  + Y + + +  P  W   E L  ++F  ASD W FGVT+ E+ T+  
Sbjct: 168 GDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227

Query: 119 EPWV--------------GLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAE 164
                              +   +++  + +EG+RLP P  CP EVY LMR+CW   P+ 
Sbjct: 228 SDSSPMALFLKMIGPTHGQMTVTRLVNTL-KEGKRLPCPPNCPDEVYQLMRKCWEFQPSN 286

Query: 165 RPKFSTLKDCLYRL 178
           R  F  L +    L
Sbjct: 287 RTSFQNLIEGFEAL 300

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score =  143 bits (363), Expect = 1e-41
 Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ +  YS  D Y       +P  W  +ESL    ++  SD W FGVT+WE+ T G 
Sbjct: 189 ADFGLSKKIYS-GDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGM 247

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+ G+   ++   +   G RL +PE C  E+Y +M  CW  +P +RP FS L+  L +L
Sbjct: 248 TPYPGVQNHEMYDYL-LHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306

Query: 179 TPA 181
             +
Sbjct: 307 LES 309

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score =  147 bits (372), Expect = 3e-41
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 405 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 464

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 465 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 518

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score =  141 bits (358), Expect = 4e-41
 Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 1/118 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++ +  F+  SD W FG+ + E+ T G  P
Sbjct: 151 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   +++Q ++R G R+ RP+ CP E+Y LMR CW + P +RP F  L+  L   
Sbjct: 211 YPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score =  142 bits (361), Expect = 4e-41
 Identities = 50/119 (42%), Positives = 67/119 (56%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFGM R     D Y +  R  LP  W P ES+ + +F+  SD W FGV +WE+FT+G +
Sbjct: 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ 259

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           PW  L+  + +  I  +G  L RP ACP EVYA+MR CW + P +R     +   L  L
Sbjct: 260 PWYQLSNTEAIDCI-TQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score =  142 bits (360), Expect = 5e-41
 Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 4/121 (3%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  Y     Y       LP  W P E+     F+  +D W FGV +WE+F+ G 
Sbjct: 185 GDFGMARDIYR-ASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 243

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ + + +   
Sbjct: 244 MPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302

Query: 179 T 179
           T
Sbjct: 303 T 303

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score =  142 bits (359), Expect = 6e-41
 Identities = 51/140 (36%), Positives = 69/140 (49%), Gaps = 6/140 (4%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  Y   D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   
Sbjct: 180 GDFGMTRDIYE-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAE 238

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +P+ GL+  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F  +   +   
Sbjct: 239 QPYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297

Query: 179 TPAVMKATQNCHEIDEEGKL 198
                +     +   EE KL
Sbjct: 298 MEPGFREVSFYYS--EENKL 315

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score =  142 bits (359), Expect = 6e-41
 Identities = 45/132 (34%), Positives = 72/132 (54%), Gaps = 5/132 (3%)

Query: 61  GDFGMMRYSQND--CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ R  ++D      T    +P  W   E++ + +F+ ASD W FG+ +WE+ T+G 
Sbjct: 189 SDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGE 248

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+  L+  ++++ I+  G RLP P  CP  +Y LM QCW +  A RPKF+ +   L +L
Sbjct: 249 RPYWELSNHEVMKAIND-GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307

Query: 179 T--PAVMKATQN 188
              P  +K   +
Sbjct: 308 IRAPDSLKTLAD 319

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score =  142 bits (361), Expect = 7e-41
 Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 6/134 (4%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
           GDFGM R  Y     Y       LP  W P E+     F+  +D W FGV +WE+F+ G 
Sbjct: 226 GDFGMARDIYR-AGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGY 284

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+   +  ++L+ +   G R+  P+ CP  VY +M QCW   P +RP F+ + + +   
Sbjct: 285 MPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343

Query: 179 T--PAVMKATQNCH 190
           T  P V+       
Sbjct: 344 TQDPDVINTALPIE 357

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score =  140 bits (356), Expect = 1e-40
 Identities = 42/120 (35%), Positives = 66/120 (55%), Gaps = 4/120 (3%)

Query: 61  GDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+ R  Y   D YV   +  +P  W  +ESL  + ++  SD W FGV +WE+ T G 
Sbjct: 192 SDFGLSRDVYE-EDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 250

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            P+ G+   ++   + + G R+ RP+ C  E+Y LM QCW + P +RP F+ +   L ++
Sbjct: 251 NPYPGIPPERLFNLL-KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score =  142 bits (361), Expect = 4e-40
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   E    P  W   E++    F+  SD W FG+ + E+ T+G  P
Sbjct: 326 ADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G++  ++++ ++R G R+PRPE CP E+Y +M +CW   P ERP F  ++  L   
Sbjct: 386 YPGMSNPEVIRALER-GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score =  138 bits (351), Expect = 5e-40
 Identities = 43/121 (35%), Positives = 61/121 (50%), Gaps = 4/121 (3%)

Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 170 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 229

Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L   +  
Sbjct: 230 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288

Query: 178 L 178
           +
Sbjct: 289 I 289

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score =  139 bits (353), Expect = 5e-40
 Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 6/136 (4%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R  +  D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+   ++ + + +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+ 
Sbjct: 259 PYPGIPVEELFKLL-KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI- 316

Query: 180 PAVMKATQNCHEIDEE 195
              +  T N   +D  
Sbjct: 317 ---LTLTTNEEYLDLS 329

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score =  137 bits (347), Expect = 1e-39
 Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 5/118 (4%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ +    +     +   LP  W   E+L+  +FS  SD W FG+ +WE+++FG  P
Sbjct: 159 SDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +  +    ++ ++++ G ++  P+ CP  VY +M+ CW  + A RP F  L++ L  +
Sbjct: 215 YPRIPLKDVVPRVEK-GYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score =  142 bits (359), Expect = 1e-39
 Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 5/135 (3%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    D Y        P  W   ESL +N+FS  SD W FGV +WE+ T+G  P
Sbjct: 360 ADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP 419

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           + G++  Q+ + +++   R+ RPE CP +VY LMR CW  NP++RP F+ +      +  
Sbjct: 420 YPGIDLSQVYELLEK-DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM-- 476

Query: 181 AVMKATQNCHEIDEE 195
              + +    E+++E
Sbjct: 477 --FQESSISDEVEKE 489

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score =  139 bits (352), Expect = 2e-39
 Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R  +  D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 304

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+   ++ + + +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 305 PYPGIPVEELFKLL-KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score =  139 bits (352), Expect = 2e-39
 Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 4/121 (3%)

Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  +     K    LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 293

Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
           A P+  +N   I   +  +G RL +PE CP  +Y +M +CW      RP FS L   +  
Sbjct: 294 APPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352

Query: 178 L 178
           +
Sbjct: 353 I 353

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score =  137 bits (347), Expect = 2e-39
 Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 8/136 (5%)

Query: 61  GDFGMMRYSQNDCYVMTERKP---LPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
            DFG+ R   +  Y   ++     LP  W  +ESL+  +F+  SD W FGV +WE+ T G
Sbjct: 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG 225

Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR 177
           A P+  ++   +   +  +G RLP+PE CP  +Y +M+QCW  +PA RP F  L   + +
Sbjct: 226 APPYRHIDPFDLTHFL-AQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284

Query: 178 LTPAVMKATQNCHEID 193
           +    + A    H + 
Sbjct: 285 I----VSALLGDHYVQ 296

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score =  136 bits (344), Expect = 1e-38
 Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 3/118 (2%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R    + YV      LP  W  +ESL ++ ++  SD W +GV +WE+ + G  P
Sbjct: 184 ADFGLSRG--QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   ++ +K+  +G RL +P  C  EVY LMRQCW + P ERP F+ +   L R+
Sbjct: 242 YCGMTCAELYEKL-PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score =  135 bits (341), Expect = 1e-38
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 9/119 (7%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAE 119
            D G+             ++ +P  W P E +++    + A+D W FG T+WE+ + G +
Sbjct: 163 SDPGISITVLPKDI---LQERIP--WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDK 217

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P   L+  + LQ  +    +LP P+A    +  L+  C    P  RP F  +   L  L
Sbjct: 218 PLSALDSQRKLQFYED-RHQLPAPKAAE--LANLINNCMDYEPDHRPSFRAIIRDLNSL 273

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score =  136 bits (345), Expect = 2e-38
 Identities = 43/119 (36%), Positives = 64/119 (53%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R     D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  
Sbjct: 233 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGS 292

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+   ++ + + +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 293 PYPGVPVEELFKLL-KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score =  137 bits (347), Expect = 4e-38
 Identities = 35/115 (30%), Positives = 63/115 (54%), Gaps = 5/115 (4%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ +    +     +   LP  W   E+L+  +FS  SD W FG+ +WE+++FG  P
Sbjct: 331 SDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           +  +    ++ ++++ G ++  P+ CP  VY +M+ CW  + A RP F  L++ L
Sbjct: 387 YPRIPLKDVVPRVEK-GYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQL 440

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score =  134 bits (339), Expect = 5e-38
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 3/120 (2%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   ++  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA 
Sbjct: 190 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249

Query: 120 PWVGL-NGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+    +  +++ +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L
Sbjct: 250 PYPGVKIDEEFCRRL-KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score =  131 bits (333), Expect = 3e-37
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R    +  YV+     LP  W   ES+ +  ++  SD W +G+ +WE+F+ G+ 
Sbjct: 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSS 246

Query: 120 PWVGL-NGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+    +  + I +EG R+  PE  P E+Y +M+ CW  +P +RP F  +   + + 
Sbjct: 247 PYPGMPVDSKFYKMI-KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score =  132 bits (334), Expect = 4e-37
 Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R    +  YV+     LP  W   ESL    ++  SD W +G+ +WE+F+ G  
Sbjct: 214 CDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVN 273

Query: 120 PWVGL-NGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+       + I + G ++ +P     E+Y +M+ CW+ +  +RP F  L   L   
Sbjct: 274 PYPGIPVDANFYKLI-QNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score =  128 bits (325), Expect = 9e-36
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 3/120 (2%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
           GDFG+ R    +  Y++     LP  W   ES+    ++  SD W +G+ +WE+F+ G  
Sbjct: 206 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLN 265

Query: 120 PWVG-LNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G L   +  + + ++G ++ +P   P  +Y++M+ CW+  P  RP F  +   L   
Sbjct: 266 PYPGILVNSKFYKLV-KDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score =  126 bits (317), Expect = 2e-34
 Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 1/120 (0%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R   ++  YV      LP  W   E++    ++  SD W FGV +WE+F+ GA 
Sbjct: 235 CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 294

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT 179
           P+ G+   +   +  +EG R+  P+    E+Y  M  CW   P++RP FS L + L  L 
Sbjct: 295 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  115 bits (289), Expect = 3e-31
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R   +    M+        W   E ++ + FS+ SD W +GV +WE+ T G  P
Sbjct: 158 TDFGLARE-WHRTTKMSAAGAYA--WMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVP 213

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G++G+ +   +      LP P  CP     LM  CW+ +P  RP F+ + D L
Sbjct: 214 FRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL 268

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  107 bits (270), Expect = 5e-28
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 2/123 (1%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R   +           P  W   E L+    ++ SD + FGV +WE+ T   +P
Sbjct: 181 CDFGLSRLKASTFLSSKSAAGTPE-WMAPEVLRDEPSNEKSDVYSFGVILWELAT-LQQP 238

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           W  LN  Q++  +  + +RL  P     +V A++  CW+  P +RP F+T+ D L  L  
Sbjct: 239 WGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298

Query: 181 AVM 183
           + +
Sbjct: 299 SAV 301

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 99.2 bits (248), Expect = 4e-25
 Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 10/118 (8%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH---NQFSQASDAWMFGVTIWEMFTFG 117
               +    Q+   +          W   E+L+    +   +++D W F V +WE+ T  
Sbjct: 155 SMADVKFSFQSPGRMYAPA------WVAPEALQKKPEDTNRRSADMWSFAVLLWELVT-R 207

Query: 118 AEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
             P+  L+ M+I  K+  EG R   P      V  LM+ C +++PA+RPKF  +   L
Sbjct: 208 EVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 98.9 bits (247), Expect = 9e-25
 Identities = 23/129 (17%), Positives = 43/129 (33%), Gaps = 15/129 (11%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP-------------WCPMESLKHNQFSQASDAWMFG 107
            DFG+ R   ++       + L  P             W   E +    + +  D + FG
Sbjct: 150 ADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFG 209

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKID-REGERLPRPEACPVEVYALMRQCWSKNPAERP 166
           + + E+               +   ++ R       P  CP   + +  +C   +P +RP
Sbjct: 210 IVLCEIIGRV-NADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRP 268

Query: 167 KFSTLKDCL 175
            F  L+  L
Sbjct: 269 SFVKLEHWL 277

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 94.3 bits (235), Expect = 4e-23
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 8/120 (6%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG     Q     MT  K     W   E  + + +S+  D + +G+ +WE+ T   +P
Sbjct: 148 CDFGTACDIQTH---MTNNKGSAA-WMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKP 202

Query: 121 WVGLNG--MQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +  + G   +I+  +   G R P  +  P  + +LM +CWSK+P++RP    +   +  L
Sbjct: 203 FDEIGGPAFRIMWAV-HNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 92.4 bits (230), Expect = 2e-22
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 11/127 (8%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPM--ESLKH---NQFSQASDAWMFGVTIWEMFT 115
           GDFG+            + + L      M  E ++    N +S  SD + FG+ ++E+ T
Sbjct: 162 GDFGLATEKSR-WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT 220

Query: 116 FGAEPWVGLNGM-QILQKIDREGER---LPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
            G  P+  +N   QI++ + R             CP  +  LM +C  K   ERP F  +
Sbjct: 221 -GQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRI 279

Query: 172 KDCLYRL 178
              +  L
Sbjct: 280 LAEIEEL 286

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 91.2 bits (227), Expect = 4e-22
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 9/119 (7%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESL--KHNQFSQASDAWMFGVTIWEMFTFGA 118
            DFG+   SQ   + ++        W   E++  +   +++ +D + F + ++ + T G 
Sbjct: 171 ADFGL---SQQSVHSVSGLLGNFQ-WMAPETIGAEEESYTEKADTYSFAMILYTILT-GE 225

Query: 119 EPWVGLNG--MQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
            P+   +   ++ +  I  EG R   PE CP  +  ++  CWS +P +RP FS +   L
Sbjct: 226 GPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKEL 284

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 89.3 bits (222), Expect = 4e-21
 Identities = 25/133 (18%), Positives = 45/133 (33%), Gaps = 18/133 (13%)

Query: 61  GDFGMMR-----YSQNDCYVMTERKPLPCPW---------CPMESLKHNQFSQASDAWMF 106
            DFG+        +      +  +    C            P        FS+ SD +  
Sbjct: 171 TDFGLFSISGVLQAGRREDKLRIQNGWLC-HLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229

Query: 107 GVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEA-CPVEVYALMRQCWSKNPAER 165
           G   +E+      P+       I+ ++   G +    +     E+  ++  CW+    ER
Sbjct: 230 GTIWYELHA-REWPFKTQPAEAIIWQMGT-GMKPNLSQIGMGKEISDILLFCWAFEQEER 287

Query: 166 PKFSTLKDCLYRL 178
           P F+ L D L +L
Sbjct: 288 PTFTKLMDMLEKL 300

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 60.1 bits (146), Expect = 7e-11
 Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 30/147 (20%)

Query: 61  GDFGMMR----YSQNDCYVMTERKPLPCPWCPMESL------KHNQFSQASDAWMFGVTI 110
            D G+       +         R      + P E L       H Q    +D + FG+ +
Sbjct: 184 ADLGLAVKFISDTNEVDIPPNTRVGTK-RYMPPEVLDESLNRNHFQSYIMADMYSFGLIL 242

Query: 111 WEMFT---------FGAEPWVGLNGMQ-----ILQKIDREGERLPRPEA-----CPVEVY 151
           WE+               P+  L         + + +  +  R   P       C  ++ 
Sbjct: 243 WEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMG 302

Query: 152 ALMRQCWSKNPAERPKFSTLKDCLYRL 178
            LM +CW+ NPA R     +K  L ++
Sbjct: 303 KLMTECWAHNPASRLTALRVKKTLAKM 329

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 23/139 (16%), Positives = 36/139 (25%), Gaps = 14/139 (10%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPM----ESLKHNQFSQASDAWMFGVTIWEMFTFG 117
           DFG     Q D    +       P        E +         D W     +  M   G
Sbjct: 194 DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN-G 252

Query: 118 AEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVYALMRQCWSKNPAERP--------KF 168
             PW       +  KI  E       P +C       +++   K P  R           
Sbjct: 253 CHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312

Query: 169 STLKDCLYRLTPAVMKATQ 187
             L++     +P   +  +
Sbjct: 313 KALQEVGGLKSPWKGEYKE 331

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1 Length = 78

 Score = 54.6 bits (131), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 27/45 (60%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
             G L ++ GD + + + + E +WW+G+N +T  +G FP N + P
Sbjct: 31  FGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHP 75

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 57.9 bits (140), Expect = 4e-10
 Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 19/106 (17%)

Query: 92  LKHNQFSQASDAWMFGVTIWEMFTFGAE---------PWVGLNGM-----QILQKIDREG 137
           +KH +  + +D +  G+  WE+    +          P+  L        ++ + +  + 
Sbjct: 229 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK 288

Query: 138 ERLPRPEA-----CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            R   P           +  +MR+CW  N A R     +K  L +L
Sbjct: 289 LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A Length = 70

 Score = 53.4 bits (128), Expect = 4e-10
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 183 MKATQNCH-----EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD 237
           M+  Q  +            L ++ GD + + + + E +WW+G+N +T  +G FP N + 
Sbjct: 7   MEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVH 66

Query: 238 P 238
           P
Sbjct: 67  P 67

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 57.7 bits (140), Expect = 4e-10
 Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 19/106 (17%)

Query: 92  LKHNQFSQASDAWMFGVTIWEMFT---------FGAEPWVGLNG-----MQILQKIDREG 137
           +      +  D W FG+ +WE+               P+  +         + + +  + 
Sbjct: 195 VDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQ 254

Query: 138 ERLPRPEA-----CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           +R   P           +  LM++CW +NP+ R     +K  L ++
Sbjct: 255 QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 56.1 bits (136), Expect = 1e-09
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 8/130 (6%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ R   +D          P    P E +    +++ SD W  G  ++E+      P
Sbjct: 158 GDFGLARILNHDTSFAKTFVGTPYYMSP-EQMNRMSYNEKSDIWSLGCLLYELCA-LMPP 215

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP 180
           +   +  ++  KI REG+    P     E+  ++ +  +     RP   ++++ L    P
Sbjct: 216 FTAFSQKELAGKI-REGKFRRIPYRYSDELNEIITRMLNLKDYHRP---SVEEILEN--P 269

Query: 181 AVMKATQNCH 190
            +++   + H
Sbjct: 270 LILEHHHHHH 279

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 55.1 bits (132), Expect = 5e-09
 Identities = 22/136 (16%), Positives = 38/136 (27%), Gaps = 21/136 (15%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPW-----CPMESLKHNQFSQASDAWMFGVTIWEMFT 115
             F  +            R   P         P         + A D W  G+ I+ ++ 
Sbjct: 253 TGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312

Query: 116 FGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAER---------P 166
               P      +   + I R  + +P+P      V AL+         +R         P
Sbjct: 313 -ADLPNTDDAALGGSEWIFRSCKNIPQP------VRALLEGFLRYPKEDRLLPLQAMETP 365

Query: 167 KFSTLKDCLYRLTPAV 182
           ++  L+  L    P  
Sbjct: 366 EYEQLRTELSAALPLY 381

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 54.3 bits (131), Expect = 7e-09
 Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 9/143 (6%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GDFG+ R   +   +       P    P E  ++  ++  SD W  G  ++E+ T     
Sbjct: 167 GDFGIARVLNSTVELARACIGTPYYLSP-EICENKPYNNKSDIWALGCVLYELCT-LKHA 224

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP------KFSTLKDC 174
           +   +   ++ KI   G   P       ++ +L+ Q + +NP +RP      +   +   
Sbjct: 225 FEAGSMKNLVLKI-ISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283

Query: 175 LYRLTPAVMKATQNCHEIDEEGK 197
           + +     + A + C +   +  
Sbjct: 284 IEKFLSPQLIAEEFCLKTFSKFG 306

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 54.1 bits (130), Expect = 8e-09
 Identities = 24/164 (14%), Positives = 44/164 (26%), Gaps = 37/164 (22%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPC-------PWCPMESLK-------HNQFSQASDAWMF 106
            DFG+      +  V    +            +   E L+            +  D +  
Sbjct: 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYAL 221

Query: 107 GVTIWEMFT--FGAEPWVGLNGMQI---------------LQKIDREGERLPRPEACPVE 149
           G+  WE+F       P   +   Q+                  + RE +R   PEA    
Sbjct: 222 GLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKEN 281

Query: 150 VYA------LMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKATQ 187
             A       +  CW ++   R      ++ +  L     +   
Sbjct: 282 SLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKS 325

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae} Length = 71

 Score = 48.4 bits (116), Expect = 3e-08
 Identities = 13/53 (24%), Positives = 28/53 (52%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD 246
            + +L I +GD++ I++      WW  Q + +   G+ P   ++P+R K+  +
Sbjct: 19  SQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRDKKHTE 71

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 51.1 bits (123), Expect = 7e-08
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 98  SQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQKIDREGERLPRPEACPVEVYALMRQ 156
            +A+D W  G TI EM T G  P+  L      + K+         PE+   E  A + +
Sbjct: 203 GKAADIWSLGCTIIEMAT-GKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILK 261

Query: 157 CWSKNPAERP 166
           C+  +P +R 
Sbjct: 262 CFEPDPDKRA 271

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 51.2 bits (123), Expect = 7e-08
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 95  NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR-PEACPVEVYAL 153
            ++ ++ D + FG+ + EM T    P+        + +    G +     +    EV  +
Sbjct: 204 EKYDESVDVYAFGMCMLEMAT-SEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262

Query: 154 MRQCWSKNPAERPKFSTL 171
           +  C  +N  ER     L
Sbjct: 263 IEGCIRQNKDERYSIKDL 280

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 51.4 bits (123), Expect = 8e-08
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 2/88 (2%)

Query: 85  PWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQKIDREGERLPRP 143
                     ++ S  SD W  G  ++ M   G  P+  + N +  L  I      +  P
Sbjct: 232 SSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIIDPNHEIEFP 290

Query: 144 EACPVEVYALMRQCWSKNPAERPKFSTL 171
           +    ++  +++ C  ++P +R     L
Sbjct: 291 DIPEKDLQDVLKCCLKRDPKQRISIPEL 318

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 10/105 (9%), Positives = 31/105 (29%), Gaps = 20/105 (19%)

Query: 94  HNQFSQASDAWMFGVTIWEMFT---------------FGAEPWVGLNGMQILQKIDREGE 138
                   D +  G+ +WE+ +               F  E     +   + + +  + +
Sbjct: 212 QRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKK 271

Query: 139 RLPRPEACPVE-----VYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           R    +          +   + +CW  +   R     + + + ++
Sbjct: 272 RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 50.1 bits (120), Expect = 2e-07
 Identities = 16/92 (17%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 85  PWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQKIDREGERLPRP 143
                     ++ S  SD W  G  ++ M   G  P+  + N +  L  I      +  P
Sbjct: 185 SSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIIDPNHEIEFP 243

Query: 144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           +    ++  +++ C  ++P +R    ++ + L
Sbjct: 244 DIPEKDLQDVLKCCLKRDPKQRI---SIPELL 272

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 49.2 bits (118), Expect = 3e-07
 Identities = 19/114 (16%), Positives = 40/114 (35%), Gaps = 7/114 (6%)

Query: 85  PWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQKIDREGERLPRP 143
                     ++ S  SD W  G  ++ M   G  P+  + N +  L  I      +  P
Sbjct: 204 SSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIIDPNHEIEFP 262

Query: 144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR--LTPAVMKATQNCHEIDEE 195
           +    ++  +++ C  ++P +R    ++ + L    +        Q      EE
Sbjct: 263 DIPEKDLQDVLKCCLKRDPKQRI---SIPELLAHPYVQIQTHPVNQMAKGTTEE 313

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 45.8 bits (109), Expect = 3e-07
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 1/41 (2%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
               L    G++  I+E      WW+ ++L+T   G  P N
Sbjct: 19  RWTDLSFHKGEKFQILE-FGPGDWWEARSLTTGETGYIPSN 58

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 45.4 bits (108), Expect = 4e-07
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            +G L  + G+Q+ I+E   E  WWK Q+L+T   G  P N
Sbjct: 19  HDGDLGFEKGEQLRILEQSGE--WWKAQSLTTGQEGFIPFN 57

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 48.8 bits (117), Expect = 4e-07
 Identities = 27/109 (24%), Positives = 46/109 (42%), Gaps = 6/109 (5%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GD G+ R+  +           P    P E +  N ++  SD W  G  ++EM      P
Sbjct: 178 GDLGLGRFFSSKTTAAHSLVGTPYYMSP-ERIHENGYNFKSDIWSLGCLLYEMAA-LQSP 235

Query: 121 WVG--LNGMQILQKIDREGERLPRPEAC-PVEVYALMRQCWSKNPAERP 166
           + G  +N   + +KI  + +  P P      E+  L+  C + +P +RP
Sbjct: 236 FYGDKMNLYSLCKKI-EQCDYPPLPSDHYSEELRQLVNMCINPDPEKRP 283

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} Length = 67

 Score = 45.0 bits (107), Expect = 5e-07
 Identities = 13/52 (25%), Positives = 21/52 (40%)

Query: 183 MKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           +KA  +    D    L    GD I ++  +    W  G++  T   G FP +
Sbjct: 10  VKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFS 61

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 45.1 bits (107), Expect = 6e-07
 Identities = 8/42 (19%), Positives = 19/42 (45%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            + G+L    GD + I+E      W++ ++ ++   G+    
Sbjct: 29  PKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAG 70

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 45.0 bits (107), Expect = 6e-07
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD 246
            E  L    G++  I+    E  WW+ ++L+T   G  P   + P+ R    D
Sbjct: 18  TEDDLSFHKGEKFQILN-SSEGDWWEARSLTTGETGYIPSIYLAPVDRLDYKD 69

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A Length = 60

 Score = 44.5 bits (106), Expect = 7e-07
 Identities = 11/46 (23%), Positives = 24/46 (52%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 239
            + +L I +GD++ I++      WW  Q + +   G+ P   ++P+
Sbjct: 15  SQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV 60

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A Length = 71

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 193 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP 244
             E +L  + G+ + +IE  + +  WWK +N     +G+ P+N +  +     
Sbjct: 18  VTEEELNFEKGETMEVIEKPENDPEWWKCKNARG-QVGLVPKNYVVVLSDGPA 69

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 44.2 bits (105), Expect = 1e-06
 Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            E  L    G++  I+    E  WW+ ++L+T   G  P N
Sbjct: 28  TEDDLSFHKGEKFQILN-SSEGDWWEARSLTTGETGYIPSN 67

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 43.8 bits (104), Expect = 2e-06
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD 246
           E   L ++ G + +I+E   + HWW+ ++    + G  P N +   +    D 
Sbjct: 15  EAHDLRLERGQEYIILE-KNDLHWWRARDKYG-SEGYIPSNYVTGKKSNNLDQ 65

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 44.0 bits (104), Expect = 2e-06
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
               L    GDQ+V++E   E  WWK ++L+T   G  P N
Sbjct: 38  HHEDLSFQKGDQMVVLEESGE--WWKARSLATRKEGYIPSN 76

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 47.3 bits (112), Expect = 2e-06
 Identities = 15/112 (13%), Positives = 28/112 (25%), Gaps = 13/112 (11%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLP------CPWCPMESLKHNQFSQASDAWMFGVTIWEMF 114
             F  +            R   P               +    + + DAW  G+ I+ ++
Sbjct: 248 TGFEHLVRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIW 307

Query: 115 TFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP 166
                P      +   + I          +  P  V AL+         +R 
Sbjct: 308 C-ADLPITKDAALGGSEWI------FRSCKNIPQPVRALLEGFLRYPKEDRL 352

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 43.4 bits (103), Expect = 2e-06
 Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 180 PAVMKATQNC-HEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           P+  +           E  L    GD + I+    + +W+K +N      G+ P N
Sbjct: 9   PSGTECIAKYNFHGTAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPAN 63

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1 Length = 72

 Score = 43.5 bits (103), Expect = 2e-06
 Identities = 10/52 (19%), Positives = 22/52 (42%)

Query: 183 MKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           +K        + +  L    GD + ++  + +  W  G++ +T   G FP +
Sbjct: 10  VKTIFPHTAGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSS 61

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens} Length = 67

 Score = 43.1 bits (102), Expect = 3e-06
 Identities = 10/58 (17%), Positives = 21/58 (36%)

Query: 177 RLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            +    +K          +  L    GD I ++  + +  W  G++  +   G FP +
Sbjct: 3   HMKKQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSS 60

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           ++E  L    GD + I +  PE  WW  ++      GM P  
Sbjct: 13  NDEEDLPFKKGDILRIRD-KPEEQWWNAEDSEG-KRGMIPVP 52

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 19/119 (15%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPW------------CPMESLKHNQFSQASDAWMFGV 108
           GDFG++     D    T   P+P                P E +  N +S   D +  G+
Sbjct: 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP-EQIHGNSYSHKVDIFSLGL 218

Query: 109 TIWEMFT-FGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP 166
            ++E+   F  +       ++ L  + R  +  P         Y +++   S +P ERP
Sbjct: 219 ILFELLYPFSTQM----ERVRTLTDV-RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERP 272

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 42.6 bits (101), Expect = 3e-06
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           ++E  L    GD + I +   E  WW  ++      GM P  
Sbjct: 15  NDEEDLPFKKGDILRIRDKPEE-QWWNAEDSEG-KRGMIPVP 54

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 46.2 bits (110), Expect = 3e-06
 Identities = 24/110 (21%), Positives = 40/110 (36%), Gaps = 15/110 (13%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPC--P-WCPMESLKHNQFSQASDAWMFGVTIWEMFTFG 117
           GDFG++           +        P +   E L+   +  A+D +  G+TI E+    
Sbjct: 199 GDFGLLVELGTAGAGEVQ-----EGDPRYMAPELLQ-GSYGTAADVFSLGLTILEVAC-N 251

Query: 118 AEPWVGLNGMQILQKIDREGERLPR-PEACPVEVYALMRQCWSKNPAERP 166
            E   G  G Q L    R+G   P        E+ +++      +P  R 
Sbjct: 252 MELPHGGEGWQQL----RQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRA 297

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 46.2 bits (110), Expect = 4e-06
 Identities = 17/113 (15%), Positives = 32/113 (28%), Gaps = 23/113 (20%)

Query: 61  GDFGMMRYSQN------DCYVMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEM 113
           GD G +    +      D             +   E L+ N      +D +   +T+   
Sbjct: 176 GDLGHVTRISSPQVEEGDSR-----------FLANEVLQENYTHLPKADIFALALTVVCA 224

Query: 114 FTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP 166
                      +    +    R+G     P+    E   L++     +P  RP
Sbjct: 225 AG-AEPLPRNGDQWHEI----RQGRLPRIPQVLSQEFTELLKVMIHPDPERRP 272

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 43.2 bits (102), Expect = 4e-06
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
               L    GDQ+V++E   E  WWK ++L+T   G  P N
Sbjct: 16  SPDDLSFQKGDQMVVLEESGE--WWKARSLATRKEGYIPSN 54

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 58

 Score = 42.2 bits (100), Expect = 5e-06
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            ++ ++ I  GD+I ++  D    W K  N +T   G+ P  
Sbjct: 13  KDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTT 54

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 42.8 bits (101), Expect = 5e-06
 Identities = 12/53 (22%), Positives = 25/53 (47%), Gaps = 2/53 (3%)

Query: 193 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP 244
             E +L  + G+ + +IE  + +  WWK +N     +G+ P+N +  +     
Sbjct: 29  VTEEELNFEKGETMEVIEKPENDPEWWKCKNARG-QVGLVPKNYVVVLSDGPA 80

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            E+ +L     D+I+ IE   +  WW G+     + G+FP N
Sbjct: 12  AEDNELTFVENDKIINIEFVDD-DWWLGELEKDGSKGLFPSN 52

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 45.3 bits (107), Expect = 9e-06
 Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 19/119 (15%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPW------------CPMESLKHNQFSQASDAWMFGV 108
           GDFG++     D    T   P+P                P E +  N +S   D +  G+
Sbjct: 206 GDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSP-EQIHGNNYSHKVDIFSLGL 264

Query: 109 TIWEMFT-FGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP 166
            ++E+   F       +  ++I+  + R  +          + + +++   S +P ERP
Sbjct: 265 ILFELLYSFST----QMERVRIITDV-RNLKFPLLFTQKYPQEHMMVQDMLSPSPTERP 318

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 41.5 bits (98), Expect = 9e-06
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
               L +  GD+  I+E +    WW+ ++      G  P N
Sbjct: 21  NANDLQLRKGDEYFILE-ESNLPWWRARD-KNGQEGYIPSN 59

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 41.5 bits (98), Expect = 9e-06
 Identities = 12/41 (29%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           + G L    G+ +++IE  P+  WW  ++    N G+ PR 
Sbjct: 23  QVGDLTFKKGEILLVIEKKPD-GWWIAKDAKG-NEGLVPRT 61

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 44.7 bits (105), Expect = 1e-05
 Identities = 14/122 (11%), Positives = 34/122 (27%), Gaps = 13/122 (10%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GD   +          +             +     F+ A +AW  G++I+ ++     P
Sbjct: 236 GDVSALWKVGTRGPASSVPVTYAPR--EFLNASTATFTHALNAWQLGLSIYRVWC-LFLP 292

Query: 121 WVGLNG-------MQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKD 173
           +  +            L+    +          P  V  L+ +  + +   R       +
Sbjct: 293 FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRL---LPLE 349

Query: 174 CL 175
            +
Sbjct: 350 AM 351

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 41.3 bits (97), Expect = 2e-05
 Identities = 9/50 (18%), Positives = 18/50 (36%), Gaps = 2/50 (4%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ 243
           +        G+++ +I  +    WWK  +LST      P   +  +    
Sbjct: 30  DISPPIFRRGEKLRVISDEGG--WWKAISLSTGRESYIPGICVARVSGPS 77

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus} Length = 71

 Score = 40.7 bits (96), Expect = 2e-05
 Identities = 11/56 (19%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDIS 248
           DE   L ++  D +++     + +W++  N+ T   G+FP      + + +P+ ++
Sbjct: 21  DE---LELEVDDPLLVELQAED-YWYEAYNMRTGARGVFPAYYAIEVTK-EPEHMA 71

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 41.2 bits (97), Expect = 2e-05
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 5/55 (9%)

Query: 193 DEEGKLYIDAGDQIVIIE----GDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ 243
           + E ++ +  GD + I+        +  WWK +  +  NIG  P N ++ ++R++
Sbjct: 27  NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG-NIGYIPYNYIEIIKRRK 80

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A Length = 58

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 7/51 (13%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRNIMDPMRR 241
            EE +L   +G+ + +++      WW G      +  +G+FP N + PM R
Sbjct: 13  LEEDELGFRSGEVVEVLDSSNP-SWWTG----RLHNKLGLFPANYVAPMMR 58

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 40.5 bits (95), Expect = 3e-05
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           D E +L    G+ I +I    E +W++G+   T   G+FP +
Sbjct: 29  DLEVELSFRKGEHICLIRKVNE-NWYEGRITGTGRQGIFPAS 69

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 40.0 bits (94), Expect = 4e-05
 Identities = 8/41 (19%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           +  +L +   ++  +++   E HWW+ Q+    + G  P +
Sbjct: 33  DPQELALRCDEEYYLLD-SSEIHWWRVQD-KNGHEGYAPSS 71

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 43.2 bits (102), Expect = 4e-05
 Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 16/138 (11%)

Query: 50  ILFFSSSSSSSG-----DFGMMRYSQNDCYVMTERKPL---PCPWCPMESLK---HNQFS 98
           IL    ++         DFG+ +      +  + R  +      W   E L        +
Sbjct: 149 ILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEG-WIAPEMLSEDCKENPT 207

Query: 99  QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR-EGERLPRPEACPVEVYALMRQC 157
              D +  G   + + + G+ P+      Q    +     + L   +   V    L+ + 
Sbjct: 208 YTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKM 267

Query: 158 WSKNPAERPKFSTLKDCL 175
            + +P +RP   + K  L
Sbjct: 268 IAMDPQKRP---SAKHVL 282

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            +E ++    GD IV ++   +  W  G    T   GM P N
Sbjct: 18  QDEDEVSFRDGDYIVNVQPIDDG-WMYGTVQRTGRTGMLPAN 58

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 1/51 (1%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP 244
           +  +L I+  + + +IE      W K +N     +G  P   +       P
Sbjct: 26  QPDELTIEEHEVLEVIEDGDMEDWVKARNKVG-QVGYVPEKYLQFPTSSGP 75

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 39.6 bits (93), Expect = 5e-05
 Identities = 8/41 (19%), Positives = 17/41 (41%), Gaps = 1/41 (2%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            EG + +  G+ + ++E D    W + +       G  P +
Sbjct: 20  SEGTISMAEGEDLSLMEEDKGDGWTRVRR-KEGGEGYVPTS 59

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 39.5 bits (93), Expect = 5e-05
 Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           D + ++    G++I ++    E +W++G+   T   G+FP  
Sbjct: 19  DTQVEMSFRKGERITLLRQVDE-NWYEGRIPGTSRQGIFPIT 59

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 42.3 bits (100), Expect = 6e-05
 Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 17/115 (14%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPC--PW--CPMESLKHNQFSQASDAWMFGVTIWEMFTF 116
           GDFG++   +ND                   P E +    + +  D +  G+ + E+   
Sbjct: 164 GDFGLVTSLKNDGKRTRS-----KGTLRYMSP-EQISSQDYGKEVDLYALGLILAELLHV 217

Query: 117 GAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTL 171
                      +    + R+G      +    +   L+++  SK P +RP  S +
Sbjct: 218 CDTA---FETSKFFTDL-RDG---IISDIFDKKEKTLLQKLLSKKPEDRPNTSEI 265

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 40.1 bits (94), Expect = 6e-05
 Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD-----IS 248
               L    G++  II  + E  WW+ ++++T   G  P N + P    Q ++     + 
Sbjct: 40  TTEDLSFKKGERFQIIN-NTEGDWWEARSIATGKSGYIPSNYVVPADSIQAEEWYFGKMG 98

Query: 249 R 249
           R
Sbjct: 99  R 99

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A* Length = 62

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           DE   L ++  D +++     + +W++  N+ T   G+FP  
Sbjct: 18  DE---LELEVDDPLLVELQAED-YWYEAYNMRTGARGVFPAY 55

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 38.4 bits (90), Expect = 9e-05
 Identities = 11/42 (26%), Positives = 15/42 (35%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
               +L +  GD I I   +P   W  G+ L     G  P  
Sbjct: 13  GSPSELPLKKGDVIYITREEPS-GWSLGKLLDGSKEGWVPTA 53

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 39.3 bits (92), Expect = 9e-05
 Identities = 8/41 (19%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           +  +L +   ++  +++   E HWW+ Q+ +  + G  P +
Sbjct: 32  DPQELALRRNEEYCLLD-SSEIHWWRVQDRNG-HEGYVPSS 70

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 38.8 bits (91), Expect = 9e-05
 Identities = 10/42 (23%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           D + ++    G++I ++    E +W++G+   T   G+FP  
Sbjct: 18  DTQVEMSFRKGERITLLRQVDE-NWYEGRIPGTSRQGIFPIT 58

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D Length = 60

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            E+ +L   AGD++  +  + E  W +G+ L +  +G++P N
Sbjct: 15  QEQDELSFKAGDELTKLGEEDEQGWCRGR-LDSGQLGLYPAN 55

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 38.8 bits (91), Expect = 1e-04
 Identities = 8/42 (19%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
               +L +  G+ I +   +    W +G+N +    G+ P +
Sbjct: 22  PGNNELTVTEGEIITVTNPNVGGGWLEGKN-NKGEQGLVPTD 62

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           + + +L +  GD + I     +  W   +N S    G+ P  
Sbjct: 13  ENDNELRLAEGDIVFISYKHGQ-GWLVAENESGSKTGLVPEE 53

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           + + +L +  GD + I     +  W   +N S    G+ P  
Sbjct: 17  ENDNELRLAEGDIVFISYKHGQ-GWLVAENESGSKTGLVPEE 57

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 38.6 bits (90), Expect = 1e-04
 Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 8/48 (16%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNI-------GMFPRN 234
               L   AGD++ +++      WW  ++L            G  P N
Sbjct: 20  TAEDLSFRAGDKLQVLD-TSHEGWWLARHLEKKGTGLGQQLQGYIPSN 66

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 4/51 (7%)

Query: 191 EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR 241
           + DE   +    GD  ++   + E  W    NL T   G+   ++++ + R
Sbjct: 19  DTDE---ISFLKGDMFIVHN-ELEDGWMWVTNLRTDEQGLIVEDLVEEVGR 65

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 13/89 (14%), Positives = 29/89 (32%), Gaps = 7/89 (7%)

Query: 98  SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GERLPRPEA----CPVEVYA 152
           +   D    G +++ +      P         L   +R+   +   P       P ++ A
Sbjct: 180 NPQDDIRGIGASLYALLV-NRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISA 238

Query: 153 LMRQCWSKNPAERPKFSTLKDCLYRLTPA 181
           +  +    +   R   STL + + + T  
Sbjct: 239 VAARSVQGDGGIRSA-STLLNLMQQATAV 266

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae} Length = 54

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 234
             + ++ ID GD I +I GD    W  G      +   G+FP +
Sbjct: 12  QGDDEISIDPGDIITVIRGDDGSGWTYG----ECDGLKGLFPTS 51

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 3/84 (3%)

Query: 90  ESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKI-DREGERLPRPEACP 147
                  +   +D W  G+++ E+ T G  P+       ++L K+   E   LP      
Sbjct: 199 PDPTKPDYDIRADVWSLGISLVELAT-GQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFS 257

Query: 148 VEVYALMRQCWSKNPAERPKFSTL 171
            +  + ++ C +K+  +RPK++ L
Sbjct: 258 GDFQSFVKDCLTKDHRKRPKYNKL 281

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 38.7 bits (90), Expect = 2e-04
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 193 DEEGKLYIDAGDQIVIIEGD----PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP 244
           + E ++ +  GD + I+        +  WWK +  +  NIG  P N ++ ++R++ 
Sbjct: 27  NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNG-NIGYIPYNYIEIIKRRKK 81

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 9/42 (21%), Positives = 14/42 (33%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
               +L +  GD + I   +P   W   + L     G  P  
Sbjct: 15  GSSSELPLKKGDIVFISRDEPS-GWSLAKLLDGSKEGWVPTA 55

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 69

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            E G L    G++I++ + D E  WW G        G+FP N
Sbjct: 20  VEPGDLTFTEGEEILVTQKDGE--WWTGS--IGDRSGIFPSN 57

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 40.9 bits (96), Expect = 2e-04
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 9/79 (11%)

Query: 90  ESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR---PEAC 146
           E L+ N + +A D W  GV ++EM   G  P+   +  ++ + I  E  R PR   PEA 
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELILMEEIRFPRTLGPEAK 377

Query: 147 PVEVYALMRQCWSKNPAER 165
                +L+     K+P +R
Sbjct: 378 -----SLLSGLLKKDPKQR 391

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ 243
               +L +  G+ I ++    +  W KG +L T   G+FP + + P+    
Sbjct: 19  HRPEELDLQKGEGIRVLGKYQD-GWLKGLSLLTGRTGIFPSDYVIPVSGPS 68

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1 Length = 62

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            E+ +L    G+ I +++ D + +WW+G+N      G+FP N
Sbjct: 17  VEDNELTFKHGELITVLD-DSDANWWQGENHR--GTGLFPSN 55

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens} Length = 72

 Score = 37.7 bits (88), Expect = 3e-04
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 234
            E+ +L   AG+ I +++     +WWKG      +  IG+FP N
Sbjct: 29  AEDNELTFKAGEIITVLDDSDP-NWWKG----ETHQGIGLFPSN 67

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 94

 Score = 37.9 bits (88), Expect = 3e-04
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 17/81 (20%)

Query: 159 SKNPAERPKFSTLKDC--LYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECH 216
             + +   +F+  +    +Y  TP            DE   L +  GD I +   +    
Sbjct: 4   GSSGSRDIRFANHETLQVIYPYTP---------QNDDE---LELVPGDFIFMSPMEQTST 51

Query: 217 ---WWKGQNLSTFNIGMFPRN 234
              W  G +L+T   G+ P N
Sbjct: 52  SEGWIYGTSLTTGCSGLLPEN 72

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens} Length = 83

 Score = 37.5 bits (87), Expect = 3e-04
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKG----QNLSTFNIGMFPRNIMDPMRRK 242
            +   L + AGD I ++E  P+   WKG        T  IG FP  I++ + ++
Sbjct: 31  HDPTALNVRAGDVITVLEQHPD-GRWKGHIHESQRGTDRIGYFPPGIVEVVSKR 83

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A Length = 58

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 234
            E+G+L    GD I +++     +WWKG      +   GMFPRN
Sbjct: 14  QEDGELGFRRGDFIHVMDNSDP-NWWKG----ACHGQTGMFPRN 52

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
             E +L +  GD++ +++   +  W+ G +  T   G FP N
Sbjct: 19  QNEDELELREGDRVDVMQQCDD-GWFVGVSRRTQKFGTFPGN 59

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 3/48 (6%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR 241
              +L +   D + +++   +  WWK ++ +    G  P NI+ P   
Sbjct: 21  NSSELSVKQRDVLEVLDDSRK--WWKVRDPAG-QEGYVPYNILTPYPA 65

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A Length = 76

 Score = 36.9 bits (86), Expect = 4e-04
 Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQ-NLSTFNIGMFPRN 234
           D + +L    G+ I++   + +  WW G         G+FP +
Sbjct: 22  DNDDELTFIEGEVIIVTGEEDQ-EWWIGHIEGQPERKGVFPVS 63

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 7/41 (17%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            +  L I  G+++ ++  +    W + Q  +    G  P  
Sbjct: 18  GDNTLSITKGEKLRVLGYNHNGEWCEAQTKN--GQGWVPSA 56

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 7/47 (14%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN------IGMFPRN 234
              ++ +  GD + ++       WWK +   T N       G  P  
Sbjct: 14  SPREVTMKKGDILTLLN-STNKDWWKVEVKITVNGKTYERQGFVPAA 59

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 36.5 bits (85), Expect = 5e-04
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 8/70 (11%)

Query: 180 PAVMKATQN-CHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRNIM 236
           P   KA Q       ++  L ++ GD + +   +     W+G+     N   G+FP   +
Sbjct: 1   PVFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNIN-GQWEGE----VNGRKGLFPFTHV 55

Query: 237 DPMRRKQPDD 246
                + PD+
Sbjct: 56  KIFDPQNPDE 65

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 39.8 bits (94), Expect = 5e-04
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 90  ESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR---PEAC 146
           E L  +  ++A D W  G  +++M T GA P+ G N  + + KI +    LP     EA 
Sbjct: 191 EILMRSGHNRAVDWWSLGALMYDMLT-GAPPFTGENRKKTIDKILKCKLNLPPYLTQEAR 249

Query: 147 PVEVYALMRQCWSKNPAER 165
                 L+++   +N A R
Sbjct: 250 -----DLLKKLLKRNAASR 263

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A Length = 58

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 7/44 (15%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 234
            ++G L +  GD++ ++E      W+KG    + N   G+FP N
Sbjct: 14  QQDGDLGLKPGDKVQLLEKLSP-EWYKG----SCNGRTGIFPAN 52

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 39.5 bits (93), Expect = 5e-04
 Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 9/79 (11%)

Query: 90  ESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR---PEAC 146
           E L+ N + +A D W  GV ++EM   G  P+   +  ++ + I  E  R PR   PEA 
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELILMEEIRFPRTLSPEAK 233

Query: 147 PVEVYALMRQCWSKNPAER 165
                +L+     K+P +R
Sbjct: 234 -----SLLAGLLKKDPKQR 247

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A Length = 60

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 7/45 (15%)

Query: 193 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFN--IGMFPRN 234
           +E G L    GD I I++  D +  WW G      N   G+FP N
Sbjct: 15  EESGDLPFRKGDVITILKKSDSQNDWWTG----RVNGREGIFPAN 55

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 36.5 bits (85), Expect = 6e-04
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 4/50 (8%)

Query: 190 HEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 239
            + DE   +    GD  ++   + E  W    NL T   G+   ++++ +
Sbjct: 20  PDTDE---ISFLKGDMFIVHN-ELEDGWMWVTNLRTDEQGLIVEDLVEEV 65

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 36.6 bits (85), Expect = 6e-04
 Identities = 9/42 (21%), Positives = 19/42 (45%), Gaps = 5/42 (11%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           DE   + +   D +++++ +    W  G+ L     G FP +
Sbjct: 32  DE---VTLQQADVVLVLQQED--GWLYGERLRDGETGWFPED 68

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A Length = 62

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 6/44 (13%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 234
             + +L I  G+ I  ++   E  W +G      N   GMFP N
Sbjct: 13  VHDDELTIRVGEIIRNVKKLQEEGWLEG----ELNGRRGMFPDN 52

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 80

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 7/45 (15%)

Query: 193 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFN--IGMFPRN 234
            + G L   AGD+I +I   D    WW+G          G+FP N
Sbjct: 29  QQPGDLNFQAGDRITVISKTDSHFDWWEG----KLRGQTGIFPAN 69

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A Length = 58

 Score = 35.6 bits (83), Expect = 8e-04
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 7/44 (15%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRN 234
            E G+L    GD I +I  D   +WW+G      N   G+FP N
Sbjct: 14  QESGELAFKRGDVITLINKDDP-NWWEG----QLNNRRGIFPSN 52

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 36.2 bits (84), Expect = 9e-04
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           +   +L I  GD I +   D E  WW G  +     G FP N
Sbjct: 18  NRSDELTIHRGDIIRVFFKDNE-DWWYGS-IGKGQEGYFPAN 57

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus} Length = 142

 Score = 37.7 bits (87), Expect = 9e-04
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 6/49 (12%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFN--IGMFPRNIMDPMR 240
           +  +L +  GD I I+    +  WW+G         IG FP N ++   
Sbjct: 18  DRSELSLKEGDIIKILNKKGQQGWWRG----EIYGRIGWFPSNYVEEDY 62

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens} Length = 89

 Score = 36.7 bits (85), Expect = 9e-04
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 194 EEGKLYIDAGDQIVIIEGDPECH----WWKGQNLSTFNIGMFPRN 234
            + +L +  GD++ ++  D        WW GQ L +  +G+FP N
Sbjct: 42  GDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQ-LPSGRVGVFPSN 85

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	251
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.98
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.98
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.98
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.98
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.98
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.98
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.98
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.98
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.98
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.98
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.98
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.98
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.98
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.98
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.98
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.98
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.98
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.98
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.98
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.98
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.98
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.98
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.98
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.98
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.98
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.98
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.98
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.98
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.98
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.97
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.97
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.97
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.97
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.97
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.97
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.97
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.97
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.97
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.97
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.97
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.97
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.97
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.97
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.97
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.97
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.97
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.97
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.97
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.97
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.97
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.97
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.97
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.97
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.97
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.97
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.97
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.97
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.97
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.97
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.97
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.97
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.97
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.97
3bhy_A	283	Death-associated protein kinase 3; death associate	99.97
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.97
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.97
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.97
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.97
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.97
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.97
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.97
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.97
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.97
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.97
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.97
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.97
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.97
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.97
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.97
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.97
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.97
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.97
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.97
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.97
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.97
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.97
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.97
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.97
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.97
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.97
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.97
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.97
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.97
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.97
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.97
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.96
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.96
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.96
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.96
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.96
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.95
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.95
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.94
3uqc_A	286	Probable conserved transmembrane protein; structur	99.93
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.93
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.87
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.72
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.5
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.17
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.67
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	97.58
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	97.5
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	96.37
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.18
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	96.08
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	95.87
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	95.72
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	95.54
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	95.46
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	95.24
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	95.15
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	95.15
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	94.99
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	94.78
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	94.43
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	94.43
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	94.26
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	94.21
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	94.18
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	94.12
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	94.06
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	94.06
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	94.02
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	93.85
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	93.77
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	93.72
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	93.67
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	93.66
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	93.61
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	93.49
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	93.43
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	93.34
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	93.16
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	93.0
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	92.98
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	92.86
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	92.84
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	92.76
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	92.75
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	92.73
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	92.73
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	92.71
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	92.7
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	92.59
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	92.58
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	92.56
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	92.54
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	92.51
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	92.46
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	92.46
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	92.45
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	92.43
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	92.42
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	92.41
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	92.39
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	92.37
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	92.3
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	92.25
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	92.21
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	92.07
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	92.01
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	91.88
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	91.88
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	91.8
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	91.78
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	91.76
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	91.74
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	91.74
1wxb_A	68	Epidermal growth factor receptor pathway substrate	91.65
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	91.65
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	91.64
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	91.61
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	91.59
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	91.56
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	91.52
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	91.5
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	91.5
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	91.44
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	91.41
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	91.23
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	91.16
1i07_A	60	Epidermal growth factor receptor kinase substrate	91.16
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	91.16
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	91.15
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	91.05
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	91.04
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	91.03
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	90.89
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	90.88
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	90.85
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	90.74
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	90.69
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	90.64
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	90.56
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	90.55
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	90.54
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	90.46
3ats_A	357	Putative uncharacterized protein; hypothetical pro	90.44
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	90.3
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	90.28
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	90.22
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	90.17
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	90.15
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	90.13
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	90.1
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	90.0
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	90.0
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	90.0
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	89.99
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	89.93
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	89.89
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	89.72
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	89.66
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	89.59
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	89.51
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	89.45
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	89.41
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	89.25
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	89.21
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	89.14
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	89.07
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	88.95
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	88.92
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	88.92
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	88.89
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	88.86
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	88.64
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	88.57
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	88.49
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	88.43
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	88.13
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	88.11
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	88.09
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	87.91
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	87.9
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	87.9
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	87.88
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	87.85
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	87.8
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	87.79
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	87.79
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	87.7
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	87.69
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	87.67
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	87.62
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	87.61
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	87.58
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	87.57
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	87.44
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	87.43
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	87.4
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	87.38
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	87.35
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	87.28
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	87.22
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	87.15
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	87.08
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	87.0
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	86.96
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	86.87
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	86.68
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	86.56
1awj_A	77	ITK; transferase, regulatory intramolecular comple	86.48
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	86.4
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	86.33
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	86.32
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	86.29
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	86.06
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	85.74
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	85.7
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	85.4
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	85.03
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	84.98
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	84.7
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	84.69
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	84.67
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	84.16
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	84.08
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	84.02
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	83.88
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	83.82
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	83.42
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	83.21
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	82.88
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	82.71
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	82.68
3u23_A	65	CD2-associated protein; structural genomics, struc	82.06
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	81.77
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	81.6
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	81.45
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	81.37
3mes_A	424	Choline kinase; malaria, structural genomics, stru	81.24
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	81.17
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	80.95
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	80.61

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.3e-45  Score=307.88  Aligned_cols=175  Identities=25%  Similarity=0.564  Sum_probs=152.7

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      |++||++.|+|.+++....                       ..++.|+++||+|||+++||||||||+|  ||+++++.
T Consensus       106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~N--ILl~~~~~  183 (308)
T 4gt4_A          106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRN--VLVYDKLN  183 (308)
T ss_dssp             EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGC
T ss_pred             EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccc--eEECCCCC
Confidence            4789999999999874321                       1245688999999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+|+...... ........||+.|||||++.+..++.++|||||||++|||+|.|..||.+.+..++...+. .
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~-~  262 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR-N  262 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH-T
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-c
Confidence            9999999998754332 3334566899999999999999999999999999999999987899999999888888874 5


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +.+++.|..+|.++.+++.+||+.||++|||+.+|+++|+..
T Consensus       263 ~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          263 RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            677788889999999999999999999999999999999764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=1.5e-45  Score=312.81  Aligned_cols=179  Identities=25%  Similarity=0.467  Sum_probs=153.5

Q ss_pred             CcccccchhHHHHHhcCCCC-----------------------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPCR-----------------------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~-----------------------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      |++||++.|+|.+++.....                       .++.|+++||+|||+++||||||||+|  ||+++++.
T Consensus       146 iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~N--ILl~~~~~  223 (353)
T 4ase_A          146 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN--ILLSEKNV  223 (353)
T ss_dssp             EEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGC
T ss_pred             EEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccc--eeeCCCCC
Confidence            46899999999997753211                       234588999999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCC-CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+|+.... ..+.......||+.|||||++.+..|+.++|||||||++|||+|+|..||.+....+....+...
T Consensus       224 vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~  303 (353)
T 4ase_A          224 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  303 (353)
T ss_dssp             EEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHH
T ss_pred             EEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHc
Confidence            99999999997533 33445566789999999999999999999999999999999998789999987655544444567


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +.+++.|..+++++.+++.+||+.||++|||+.+|+++|..+.+.
T Consensus       304 g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          304 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            788888899999999999999999999999999999999887653

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.8e-45  Score=307.80  Aligned_cols=177  Identities=29%  Similarity=0.564  Sum_probs=146.1

Q ss_pred             CcccccchhHHHHHhcCCC----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCce
Q psy2787           1 MSANFAELNAFQENYTEPC----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSS   58 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~   58 (251)
                      |++||++.|+|.+++....                      ..++.|+++||+|||+++||||||||+|  ||++.++.+
T Consensus       120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~N--ILl~~~~~~  197 (329)
T 4aoj_A          120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRN--CLVGQGLVV  197 (329)
T ss_dssp             EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEEETTTEE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhh--EEECCCCcE
Confidence            4789999999999765432                      2356688899999999999999999999  999999999


Q ss_pred             EEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC
Q psy2787          59 SSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG  137 (251)
Q Consensus        59 kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~  137 (251)
                      ||+|||+|+...... ........||+.|||||++.+..++.++|||||||++|||+|+|+.||.+.+..++...+. .+
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~-~g  276 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT-QG  276 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH-HT
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cC
Confidence            999999999754332 3334556799999999999999999999999999999999987899999998888888875 56


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .+++.|..+|+++.+|+.+||+.||++|||+.+|+++|+.+.+
T Consensus       277 ~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~  319 (329)
T 4aoj_A          277 RELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ  319 (329)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence            6778888999999999999999999999999999999987754

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=9.2e-46  Score=307.65  Aligned_cols=177  Identities=27%  Similarity=0.543  Sum_probs=153.7

Q ss_pred             CcccccchhHHHHHhcCC--------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEE
Q psy2787           1 MSANFAELNAFQENYTEP--------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSS   60 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl   60 (251)
                      |++||++.|+|.+++...                    +..++.|+++||+|||+++||||||||+|  ||++.++.+||
T Consensus        92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~N--ILl~~~~~~Ki  169 (299)
T 4asz_A           92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRN--CLVGENLLVKI  169 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGCEEE
T ss_pred             EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhh--EEECCCCcEEE
Confidence            478999999999877532                    12356788899999999999999999999  99999999999


Q ss_pred             ccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC
Q psy2787          61 GDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER  139 (251)
Q Consensus        61 ~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~  139 (251)
                      +|||+|+...... ........||+.|||||++.+..++.++|||||||++|||+|+|+.||.+.+..++...+. .+.+
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~-~~~~  248 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT-QGRV  248 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-HTCC
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCC
Confidence            9999998754333 3344556789999999999999999999999999999999987899999999888888875 5666


Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         140 LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       140 ~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ++.|..+|+++.+++.+||+.||++|||+.+|++.|+.+.+
T Consensus       249 ~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~  289 (299)
T 4asz_A          249 LQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAK  289 (299)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            77888999999999999999999999999999998887654

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.6e-44  Score=299.34  Aligned_cols=178  Identities=20%  Similarity=0.327  Sum_probs=141.9

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |++||++.|+|.+++.....        .++.|+++||+|||+++||||||||+|  ||+++++.+||+|||+|+.....
T Consensus       108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~N--ILl~~~~~~Ki~DFGla~~~~~~  185 (307)
T 3omv_A          108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNN--IFLHEGLTVKIGDFGLATVKSRW  185 (307)
T ss_dssp             EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSS--EEEETTEEEEECCCSSCBC----
T ss_pred             EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHH--EEECCCCcEEEeeccCceecccC
Confidence            47899999999998754322        345678899999999999999999999  99999999999999999875432


Q ss_pred             -ceeecCCCCcCcccCCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC----CCCC
Q psy2787          73 -CYVMTERKPLPCPWCPMESLKH---NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL----PRPE  144 (251)
Q Consensus        73 -~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~  144 (251)
                       .........||+.|||||++.+   +.|+.++|||||||++|||++ |+.||.+.+.......+...+...    ..+.
T Consensus       186 ~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ellt-g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  264 (307)
T 3omv_A          186 SGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMT-GELPYSHINNRDQIIFMVGRGYASPDLSKLYK  264 (307)
T ss_dssp             --------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHH-SSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCT
T ss_pred             CcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHH-CCCCCCCCChHHHHHHHHhcCCCCCCcccccc
Confidence             2223455689999999999864   458999999999999999999 999999877655554444444333    2346


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .+|.++.+++.+||+.||++|||+.+|+++|+.+..+
T Consensus       265 ~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~  301 (307)
T 3omv_A          265 NCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS  301 (307)
T ss_dssp             TSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred             cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcc
Confidence            7999999999999999999999999999999877543

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5e-44  Score=300.53  Aligned_cols=178  Identities=16%  Similarity=0.189  Sum_probs=147.6

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~~~~   72 (251)
                      |+|||++.|+|.+.+...       ...++.|++.||+|||+++||||||||+|  ||++.+| .+||+|||+|+.....
T Consensus       127 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N--ILl~~~g~~vKl~DFGla~~~~~~  204 (336)
T 4g3f_A          127 IFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADN--VLLSSDGSRAALCDFGHALCLQPD  204 (336)
T ss_dssp             EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGG--EEECTTSCCEEECCCTTCEEC---
T ss_pred             EEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHH--EEEeCCCCEEEEeeCCCCeEccCC
Confidence            478999999999876532       23457788999999999999999999999  9999988 6999999999975433


Q ss_pred             ce----eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-CCCCCCc
Q psy2787          73 CY----VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-PRPEACP  147 (251)
Q Consensus        73 ~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~  147 (251)
                      ..    .......||+.|||||++.+..++.++||||+||++|||++ |+.||.+.+..++...+....... ..++.++
T Consensus       205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s  283 (336)
T 4g3f_A          205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLN-GCHPWTQYFRGPLCLKIASEPPPIREIPPSCA  283 (336)
T ss_dssp             ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSC
T ss_pred             CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CcCCCCCCCHHHHHHHHHcCCCCchhcCccCC
Confidence            21    12344679999999999999999999999999999999999 999999887777777776554332 3567899


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +++.+++.+||+.||++|||+.+++++|......
T Consensus       284 ~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~  317 (336)
T 4g3f_A          284 PLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE  317 (336)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence            9999999999999999999999999998766544

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=9.6e-44  Score=300.17  Aligned_cols=172  Identities=15%  Similarity=0.204  Sum_probs=148.1

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |+|||++.|+|.+++....         ..++.|++.||+|||++|||||||||+|  ||++.++.+||+|||+|+....
T Consensus       100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N--ILl~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A          100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQN--IFLTKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGG--EEECTTCCEEECSTTEESCCCH
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHH--EEECCCCCEEEcccccceeecC
Confidence            5799999999999874322         2356788899999999999999999999  9999999999999999987543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .. .......||+.|||||++.+..|+.++||||+||++|||++ |+.||.+.+..++...+... ..++.+..++.++.
T Consensus       178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemlt-G~~PF~~~~~~~~~~~i~~~-~~~~~~~~~s~~~~  254 (350)
T 4b9d_A          178 TV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT-LKHAFEAGSMKNLVLKIISG-SFPPVSLHYSYDLR  254 (350)
T ss_dssp             HH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHT-CCCCCCTTSCHHHH
T ss_pred             Cc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHcC-CCCCCCccCCHHHH
Confidence            21 12234579999999999999999999999999999999999 99999999988888888654 34556778999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +||.+||+.||++|||+.++++|-+-
T Consensus       255 ~li~~~L~~dP~~R~s~~e~l~hp~~  280 (350)
T 4b9d_A          255 SLVSQLFKRNPRDRPSVNSILEKGFI  280 (350)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHHh
Confidence            99999999999999999999998653

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.3e-43  Score=298.83  Aligned_cols=174  Identities=16%  Similarity=0.234  Sum_probs=148.1

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      |++||++.|+|.+.+...      ...++.|++.||+|||++|||||||||+|  ||++.++.+||+|||+|+.......
T Consensus       148 ivmEy~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N--ILl~~~g~vKl~DFGla~~~~~~~~  225 (346)
T 4fih_A          148 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS--ILLTHDGRVKLSDFGFCAQVSKEVP  225 (346)
T ss_dssp             EEECCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTCCEEECCCTTCEECCSSSC
T ss_pred             EEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHH--EEECCCCCEEEecCcCceecCCCCC
Confidence            578999999998866532      23457788899999999999999999999  9999999999999999997654322


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-CCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-RLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~l  153 (251)
                       ...+..||+.|||||++.+..|+.++||||+||++|||++ |..||.+.+..+....+..... ..+.+..+++++.+|
T Consensus       226 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~-G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dl  303 (346)
T 4fih_A          226 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF  303 (346)
T ss_dssp             -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHH
T ss_pred             -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHH
Confidence             3456789999999999999999999999999999999999 9999999888888887754322 233445789999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +.+||..||++|||+.++++|-+-.
T Consensus       304 i~~~L~~dP~~R~ta~e~l~Hp~~~  328 (346)
T 4fih_A          304 LDRLLVRDPAQRATAAELLKHPFLA  328 (346)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             HHHHcCCChhHCcCHHHHhcCHhhc
Confidence            9999999999999999999986643

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.1e-43  Score=295.18  Aligned_cols=173  Identities=14%  Similarity=0.133  Sum_probs=149.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-   72 (251)
                      |++||++.|+|.+++...       +..++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+|+..... 
T Consensus       109 ivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeN--ILl~~~g~vKl~DFGla~~~~~~~  186 (311)
T 4aw0_A          109 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN--ILLNEDMHIQITDFGTAKVLSPES  186 (311)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTSCEEECCCTTCEECCTTT
T ss_pred             EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHH--eEEcCCCCEEEEEcCCceecCCCC
Confidence            578999999999876532       34467788999999999999999999999  99999999999999999986433 


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      ......+.+||+.|||||++.+..++.++||||+||++|||++ |..||.+.+..++...+.....  ..|..+++++.+
T Consensus       187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~-G~~PF~~~~~~~~~~~i~~~~~--~~p~~~s~~~~d  263 (311)
T 4aw0_A          187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEGLIFAKIIKLEY--DFPEKFFPKARD  263 (311)
T ss_dssp             TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCC--CCCTTCCHHHHH
T ss_pred             CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC--CCCcccCHHHHH
Confidence            2234556789999999999999999999999999999999999 9999999998889888876543  456789999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      |+.+||..||++|||+++++.+-+-+
T Consensus       264 li~~lL~~dp~~R~t~~e~~~~~~i~  289 (311)
T 4aw0_A          264 LVEKLLVLDATKRLGCEEMEGYGPLK  289 (311)
T ss_dssp             HHHHHSCSSGGGSTTSGGGTCHHHHH
T ss_pred             HHHHHccCCHhHCcChHHHcCCHHHH
Confidence            99999999999999999976654433

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=3.7e-43  Score=290.31  Aligned_cols=170  Identities=15%  Similarity=0.225  Sum_probs=139.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCC--cccCCCCCCCceEEEcc-CCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFFS-SSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~~-~~~~kl~DFGla~~~~   70 (251)
                      |++||++.|+|.+++...       +..++.|++.||+|||+++  ||||||||+|  ||++. ++.+||+|||+|+...
T Consensus       106 lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~N--ILl~~~~g~vKl~DFGla~~~~  183 (290)
T 3fpq_A          106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN--IFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGG--EEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhh--eeEECCCCCEEEEeCcCCEeCC
Confidence            468999999999876532       2345678899999999998  9999999999  99974 7899999999998654


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      ...   ..+..||+.|||||++.+ .++.++|||||||++|||++ |+.||.+... ..+...+.....+...+..++++
T Consensus       184 ~~~---~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyellt-g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  258 (290)
T 3fpq_A          184 ASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMAT-SEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE  258 (290)
T ss_dssp             TTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHH-SSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred             CCc---cCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHH-CCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHH
Confidence            432   234579999999999875 69999999999999999999 9999987554 44555554333333445678899


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+++.+||+.||++|||+.++++|.+-
T Consensus       259 ~~~li~~~L~~dP~~R~s~~e~l~Hp~~  286 (290)
T 3fpq_A          259 VKEIIEGCIRQNKDERYSIKDLLNHAFF  286 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            9999999999999999999999988653

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.1e-42  Score=300.05  Aligned_cols=173  Identities=16%  Similarity=0.238  Sum_probs=148.5

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      |+|||++.|+|.+.+...      ...++.|++.||+|||++|||||||||+|  ||++.+|.+||+|||+|+.......
T Consensus       225 iVmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~N--ILl~~~g~vKl~DFGla~~~~~~~~  302 (423)
T 4fie_A          225 VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDS--ILLTHDGRVKLSDFGFCAQVSKEVP  302 (423)
T ss_dssp             EEEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTT--EEECTTCCEEECCCTTCEECCSSCC
T ss_pred             EEEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHH--EEEcCCCCEEEecCccceECCCCCc
Confidence            579999999999876532      23457788899999999999999999999  9999999999999999987654322


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-CCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-RLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~l  153 (251)
                       .....+||+.|||||++.+..|+.++||||+||++|||++ |..||.+.+..+.+..+..... ..+.+..+++++.+|
T Consensus       303 -~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~-G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dl  380 (423)
T 4fie_A          303 -RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD-GEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF  380 (423)
T ss_dssp             -CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHH
T ss_pred             -cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHH
Confidence             3456789999999999999999999999999999999999 9999999888888887755432 234456799999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      |.+||..||++|||+.++++|-+-
T Consensus       381 i~~~L~~dP~~R~ta~ell~Hp~~  404 (423)
T 4fie_A          381 LDRLLVRDPAQRATAAELLKHPFL  404 (423)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred             HHHHcCCChhHCcCHHHHhcCHHh
Confidence            999999999999999999998664

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.2e-42  Score=285.08  Aligned_cols=169  Identities=13%  Similarity=0.179  Sum_probs=135.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||+. |+|++.+...       ...++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+|+......
T Consensus        90 ivmEy~~-g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~N--ILl~~~~~vkl~DFGla~~~~~~~  166 (275)
T 3hyh_A           90 MVIEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPEN--LLLDEHLNVKIADFGLSNIMTDGN  166 (275)
T ss_dssp             EEEECCC-EEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTT--EEECTTCCEEECCSSCC-------
T ss_pred             EEEeCCC-CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHH--eEECCCCCEEEeecCCCeecCCCC
Confidence            4689994 7888866432       23457788899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        ...+..||+.|||||++.+..+ +.++||||+||++|+|++ |+.||.+.+..++...+....  .+.+..+++++.+
T Consensus       167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~llt-g~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~  241 (275)
T 3hyh_A          167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC-RRLPFDDESIPVLFKNISNGV--YTLPKFLSPGAAG  241 (275)
T ss_dssp             ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTC--CCCCTTSCHHHHH
T ss_pred             --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHH
Confidence              2345689999999999998776 579999999999999999 999999988888888886553  4456789999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+||+.||++|||++++++|-+-
T Consensus       242 li~~~L~~dP~~R~s~~eil~hpw~  266 (275)
T 3hyh_A          242 LIKRMLIVNPLNRISIHEIMQDDWF  266 (275)
T ss_dssp             HHHHHSCSSGGGSCCHHHHHHCHHH
T ss_pred             HHHHHccCChhHCcCHHHHHcCccc
Confidence            9999999999999999999998764

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=2.9e-43  Score=292.42  Aligned_cols=171  Identities=19%  Similarity=0.256  Sum_probs=145.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.|+|.+++...       ...++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+|+......
T Consensus       103 ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N--ILl~~~g~vKl~DFGla~~~~~~~  180 (304)
T 3ubd_A          103 LILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPEN--ILLDEEGHIKLTDFGLSKESIDHE  180 (304)
T ss_dssp             EEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGG--EEECTTSCEEEESSEEEEC-----
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHH--eEEcCCCCEEecccccceeccCCC
Confidence            578999999999876532       23467788999999999999999999999  999999999999999998643322


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       ....+..||+.|||||++.+..++.++||||+||++|||++ |..||.+.+..++...+....  ++.|..+++++.++
T Consensus       181 -~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemlt-G~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~l  256 (304)
T 3ubd_A          181 -KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT-GTLPFQGKDRKETMTMILKAK--LGMPQFLSPEAQSL  256 (304)
T ss_dssp             -CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHH
T ss_pred             -ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHh-CCCCCCCcCHHHHHHHHHcCC--CCCCCcCCHHHHHH
Confidence             23345689999999999999999999999999999999999 999999999888888887653  45567899999999


Q ss_pred             HHHHhccCCCCCCCH-----HHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKF-----STLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~-----~~il~~l~~  177 (251)
                      +.+||+.||++|||+     +++++|-+-
T Consensus       257 i~~~L~~dP~~R~ta~~~~~~eil~Hp~f  285 (304)
T 3ubd_A          257 LRMLFKRNPANRLGAGPDGVEEIKRHSFF  285 (304)
T ss_dssp             HHHHTCSSGGGSTTCSTTTHHHHHTSGGG
T ss_pred             HHHHcccCHHHCCCCCcCCHHHHHcCccc
Confidence            999999999999984     688877653

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=7e-41  Score=279.33  Aligned_cols=177  Identities=16%  Similarity=0.231  Sum_probs=135.7

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhC--------CcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVN--------NICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~--------~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      |++||++.|+|.+.+...      ..+++.|+++||+|||++        +||||||||+|  ||++.++.+||+|||+|
T Consensus        78 lV~Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~N--ILl~~~~~~Ki~DFGla  155 (303)
T 3hmm_A           78 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN--ILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGG--EEECTTSCEEECCCTTC
T ss_pred             EEecCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCccc--EEECCCCCEEEEeCCCC
Confidence            468999999999877542      224566888999999987        99999999999  99999999999999999


Q ss_pred             cccCCCcee---ecCCCCcCcccCCCcccCCC------CCCchhHHHHHHHHHHHHHhCCCCCCC----------CC---
Q psy2787          67 RYSQNDCYV---MTERKPLPCPWCPMESLKHN------QFSQASDAWMFGVTIWEMFTFGAEPWV----------GL---  124 (251)
Q Consensus        67 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~S~G~il~el~~~g~~pf~----------~~---  124 (251)
                      +........   ......||+.|||||++.+.      .++.++|||||||++|||++ |..||.          +.   
T Consensus       156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~t-g~~~~~~~~~~~~p~~~~~~~  234 (303)
T 3hmm_A          156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPYYDLVPS  234 (303)
T ss_dssp             EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH-TBCBTTBCCCCCCTTTTTSCS
T ss_pred             ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHH-CCCCCCccccccccchhcccc
Confidence            875433221   22346799999999998754      35679999999999999999 876542          21   


Q ss_pred             --ChhHHHHHHHhcCCCCCCCCC-----CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         125 --NGMQILQKIDREGERLPRPEA-----CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       125 --~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                        ...++...+...+.++..|..     ++..+.+|+.+||+.||++|||+.+|++.|+.+.+
T Consensus       235 ~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~  297 (303)
T 3hmm_A          235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ  297 (303)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHH
Confidence              223444555555556555432     34578899999999999999999999999987754

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=7.9e-41  Score=278.18  Aligned_cols=169  Identities=14%  Similarity=0.222  Sum_probs=125.1

Q ss_pred             CcccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      |.+||++.|+|.+.+....          ..++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+|+...
T Consensus        92 ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~N--ILl~~~~~vKl~DFGla~~~~  169 (299)
T 4g31_A           92 IQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSN--IFFTMDDVVKVGDFGLVTAMD  169 (299)
T ss_dssp             EEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTCCEEECCCCCC----
T ss_pred             EEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHH--eEECCCCcEEEccCccceecC
Confidence            4689999999998775432          2356788999999999999999999999  999999999999999998754


Q ss_pred             CCce-----------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCC
Q psy2787          71 NDCY-----------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGE  138 (251)
Q Consensus        71 ~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~  138 (251)
                      ....           .......||+.|||||++.+..|+.++||||+||++|||++    ||.+... ......+. ...
T Consensus       170 ~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~----Pf~~~~~~~~~~~~~~-~~~  244 (299)
T 4g31_A          170 QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY----PFSTQMERVRTLTDVR-NLK  244 (299)
T ss_dssp             ----------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS----CCSSHHHHHHHHHHHH-TTC
T ss_pred             CCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc----CCCCccHHHHHHHHHh-cCC
Confidence            3221           11234579999999999999999999999999999999996    7765322 12233332 222


Q ss_pred             CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         139 RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .++.....++...+++.+||+.||++|||+.++++|-+
T Consensus       245 ~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~  282 (299)
T 4g31_A          245 FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAV  282 (299)
T ss_dssp             CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHh
Confidence            22222334567789999999999999999999998744

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.5e-39  Score=278.78  Aligned_cols=174  Identities=17%  Similarity=0.140  Sum_probs=140.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++ |+|.+.+...       ...++.|++.||+|||++|||||||||+|  ||++.++.+||+|||+|+......
T Consensus       136 ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~N--Il~~~~~~~Ki~DFGla~~~~~~~  212 (398)
T 4b99_A          136 VVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSN--LLVNENCELKIGDFGMARGLCTSP  212 (398)
T ss_dssp             EEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTCCEEECCCTTCBCC----
T ss_pred             EEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccc--cccCCCCCEEEeecceeeecccCc
Confidence            4689997 6788876543       23457788999999999999999999999  999999999999999998754322


Q ss_pred             ---eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--------
Q psy2787          74 ---YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--------  141 (251)
Q Consensus        74 ---~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--------  141 (251)
                         .....+..||+.|||||++.+. .++.++||||+||++|||++ |+.||.+.+..+.+..|......++        
T Consensus       213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~-G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~  291 (398)
T 4b99_A          213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA-RRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVG  291 (398)
T ss_dssp             ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH-TSCSSCCSSHHHHHHHHHHHHCCCCGGGTC---
T ss_pred             cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHH-CCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhh
Confidence               2234567899999999998775 46899999999999999999 9999999888777776644211111        


Q ss_pred             ----------------C-----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         142 ----------------R-----PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       142 ----------------~-----~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                                      .     .+.+++++.+||.+||..||++|||+.++++|-+--
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~  349 (398)
T 4b99_A          292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLA  349 (398)
T ss_dssp             --CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGT
T ss_pred             hhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhC
Confidence                            0     135688999999999999999999999999987643

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.3e-39  Score=273.33  Aligned_cols=174  Identities=17%  Similarity=0.203  Sum_probs=132.3

Q ss_pred             CcccccchhHHHHHhcC----CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccCCCce-
Q psy2787           1 MSANFAELNAFQENYTE----PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQNDCY-   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~----~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~~~~~-   74 (251)
                      |++||++.++|.+.+..    ....++.|++.||+|||++||+||||||+|  ||++.+ +.+||+|||+|+....... 
T Consensus        97 lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeN--iLl~~~~~~~kl~DFGla~~~~~~~~~  174 (361)
T 4f9c_A           97 IAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSN--FLYNRRLKKYALVDFGLAQGTHDTKIE  174 (361)
T ss_dssp             EEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred             EEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHH--eEEeCCCCeEEECcCCCCcccCCcccc
Confidence            47899999999987643    234567888999999999999999999999  999876 7999999999986432210 


Q ss_pred             --------------------------eecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCC-Ch
Q psy2787          75 --------------------------VMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGL-NG  126 (251)
Q Consensus        75 --------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~-~~  126 (251)
                                                .......||+.|+|||++.+. .++.++||||+||++|||++ |+.||... +.
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~-G~~Pf~~~~~~  253 (361)
T 4f9c_A          175 LLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLS-GRYPFYKASDD  253 (361)
T ss_dssp             GGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH-TCSSSSCCSSH
T ss_pred             ccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHH-CCCCCCCCCCH
Confidence                                      112345799999999999875 48999999999999999999 99999543 33


Q ss_pred             hHHHHHHHhc--------------------------------------C--------------CCCCCCCCCcHHHHHHH
Q psy2787         127 MQILQKIDRE--------------------------------------G--------------ERLPRPEACPVEVYALM  154 (251)
Q Consensus       127 ~~~~~~i~~~--------------------------------------~--------------~~~~~~~~~~~~~~~li  154 (251)
                      .+.+..+...                                      .              ........+++++.+|+
T Consensus       254 ~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl  333 (361)
T 4f9c_A          254 LTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLL  333 (361)
T ss_dssp             HHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHH
T ss_pred             HHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHH
Confidence            3333322110                                      0              00011245788999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHh
Q psy2787         155 RQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       155 ~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .+||..||++|+|++++++|.+-
T Consensus       334 ~~lL~~dP~~R~ta~eaL~Hp~f  356 (361)
T 4f9c_A          334 DKLLDLNPASRITAEEALLHPFF  356 (361)
T ss_dssp             HHHTCSCTTTSCCHHHHHTSGGG
T ss_pred             HHHCcCChhHCcCHHHHhcCccc
Confidence            99999999999999999998653

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.1e-38  Score=285.47  Aligned_cols=169  Identities=11%  Similarity=0.140  Sum_probs=142.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.|+|...+...       +..++.|++.||+|||++|||||||||+|  ||++.+|.+||+|||+|+..... 
T Consensus       269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeN--ILld~~G~vKL~DFGlA~~~~~~-  345 (689)
T 3v5w_A          269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN--ILLDEHGHVRISDLGLACDFSKK-  345 (689)
T ss_dssp             EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGG--EEECTTSCEEECCCTTCEECSSC-
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHH--eEEeCCCCEEecccceeeecCCC-
Confidence            579999999999876532       34467788999999999999999999999  99999999999999999876544 


Q ss_pred             eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---hhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLN---GMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                        ...+.+||+.|||||++.. ..|+.++||||+||++|||++ |..||.+.+   ..++...+...  ....|..++++
T Consensus       346 --~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLt-G~~PF~~~~~~~~~~i~~~i~~~--~~~~p~~~S~~  420 (689)
T 3v5w_A          346 --KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPFRQHKTKDKHEIDRMTLTM--AVELPDSFSPE  420 (689)
T ss_dssp             --CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCGGGCCCHHHHHHHHHHC--CCCCCTTSCHH
T ss_pred             --CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCC--CCCCCccCCHH
Confidence              2456789999999999964 579999999999999999999 999997643   33455555443  34556789999


Q ss_pred             HHHHHHHHhccCCCCCCC-----HHHHHHHHHh
Q psy2787         150 VYALMRQCWSKNPAERPK-----FSTLKDCLYR  177 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps-----~~~il~~l~~  177 (251)
                      +.+||.+||..||++|++     +.+|++|.+.
T Consensus       421 a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF  453 (689)
T 3v5w_A          421 LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF  453 (689)
T ss_dssp             HHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGG
T ss_pred             HHHHHHHHccCCHhHCCCCCCCCHHHHhcCccc
Confidence            999999999999999998     7899988764

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=7.4e-38  Score=281.44  Aligned_cols=171  Identities=14%  Similarity=0.195  Sum_probs=146.8

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC--CceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS--SSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~--~~~kl~DFGla~~~~   70 (251)
                      |.+||++.|+|.+++...        ...++.|++.||+|||+++|+||||||+|  ||++.+  +.+||+|||+|+...
T Consensus       231 iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~N--ill~~~~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          231 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN--IMFTTKRSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             EEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEESSSSCCCEEECCCSSCEECC
T ss_pred             EEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhh--ccccCCCCCCEEEeeccceeEcc
Confidence            578999999999877533        23457888999999999999999999999  888754  899999999999865


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~  148 (251)
                      ....  .....||+.|||||++.+..|+.++||||+||++|||++ |..||.+.+..+.+..+......++.  ...++.
T Consensus       309 ~~~~--~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  385 (573)
T 3uto_A          309 PKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE  385 (573)
T ss_dssp             TTSE--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCH
T ss_pred             CCCc--eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCH
Confidence            5432  233578999999999999999999999999999999999 99999999988888888665544432  357899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+||.+||..||++|||+.++++|-+
T Consensus       386 ~~~dli~~~L~~dp~~R~t~~e~l~Hpw  413 (573)
T 3uto_A          386 DGKDFIRKLLLADPNTRMTIHQALEHPW  413 (573)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence            9999999999999999999999999865

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=2.9e-36  Score=258.28  Aligned_cols=178  Identities=27%  Similarity=0.555  Sum_probs=150.0

Q ss_pred             CcccccchhHHHHHhcCCCC-----------------------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPCR-----------------------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~-----------------------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+++.....                       .++.|++.||+|||++||+||||||+|  |+++.++.
T Consensus       164 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~~~  241 (370)
T 2psq_A          164 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN--VLVTENNV  241 (370)
T ss_dssp             EEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEECTTCC
T ss_pred             EEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhh--EEECCCCC
Confidence            46899988888887654321                       135688899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+++...... ........+|+.|+|||++.+..++.++|||||||++|||+++|..||.+....++...+ ..
T Consensus       242 ~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~-~~  320 (370)
T 2psq_A          242 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-KE  320 (370)
T ss_dssp             EEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-HT
T ss_pred             EEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-hc
Confidence            9999999998754332 223344567788999999999899999999999999999998799999998877777666 45


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +.+...+..++.++.+++.+||+.||++|||+.+++++|+.+...
T Consensus       321 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~  365 (370)
T 2psq_A          321 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTL  365 (370)
T ss_dssp             TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            566677788999999999999999999999999999999988654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=5.3e-36  Score=254.97  Aligned_cols=158  Identities=28%  Similarity=0.516  Sum_probs=134.6

Q ss_pred             CchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC-CceeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          23 LPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        23 ~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                      +.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.... ..........+|+.|+|||++.+..++.++
T Consensus       199 ~~ql~~aL~~LH~~~ivH~Dikp~N--Ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  276 (359)
T 3vhe_A          199 SFQVAKGMEFLASRKCIHRDLAARN--ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS  276 (359)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHH
T ss_pred             HHHHHHHHHHHHHCCcccCCCChhh--EEEcCCCcEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchh
Confidence            4578899999999999999999999  9999999999999999986433 333344566788899999999988999999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         102 DAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       102 Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ||||||+++|||+++|..||.+....+........+.....+..+++++.+++.+||+.||++|||+.+++++|+.+...
T Consensus       277 Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          277 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence            99999999999997699999887655555444456667777788999999999999999999999999999999988765


Q ss_pred             H
Q psy2787         182 V  182 (251)
Q Consensus       182 ~  182 (251)
                      .
T Consensus       357 ~  357 (359)
T 3vhe_A          357 N  357 (359)
T ss_dssp             H
T ss_pred             h
Confidence            3

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2.6e-36  Score=265.12  Aligned_cols=178  Identities=26%  Similarity=0.564  Sum_probs=152.9

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+++...         ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++....
T Consensus       259 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N--ill~~~~~~kl~DFG~a~~~~~  336 (454)
T 1qcf_A          259 IITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAAN--ILVSASLVCKIADFGLARVIED  336 (454)
T ss_dssp             EEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGG--EEECTTCCEEECSTTGGGGBCC
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHH--EEECCCCcEEEeeCCCceEcCC
Confidence            468999988888876532         12356788899999999999999999999  9999999999999999987655


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........+|..|+|||++.+..++.++||||||+++|||+++|..||.+.+..++...+. .+.+.+.+..++.++.
T Consensus       337 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~  415 (454)
T 1qcf_A          337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMPRPENCPEELY  415 (454)
T ss_dssp             HHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-HTCCCCCCTTSCHHHH
T ss_pred             CceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHH
Confidence            443344455678889999999988999999999999999999987999999988888877774 5667777888999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +++.+||+.||++|||+.+|++.|+.+...
T Consensus       416 ~li~~cl~~dp~~RPt~~~i~~~L~~~~~~  445 (454)
T 1qcf_A          416 NIMMRCWKNRPEERPTFEYIQSVLDDFYTA  445 (454)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred             HHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence            999999999999999999999999887643

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=1.7e-35  Score=243.95  Aligned_cols=179  Identities=28%  Similarity=0.615  Sum_probs=138.1

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~  169 (281)
T 1mp8_A           92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN--VLVSSNDCVKLGDFGLSRYMEDS  169 (281)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEEEETTEEEECC----------
T ss_pred             EEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHH--EEECCCCCEEECccccccccCcc
Confidence            3578998888888765322        1235678899999999999999999999  99999999999999999876554


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........+++.|+|||++.+..++.++||||||+++|||++.|..||.+....+....+. .+...+.+..++.++.+
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~  248 (281)
T 1mp8_A          170 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYS  248 (281)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTCCHHHHH
T ss_pred             cccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH-cCCCCCCCCCCCHHHHH
Confidence            43344455667889999999988899999999999999999965899999888777777764 45556677889999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ++.+||+.||++|||+.+++++|..+....
T Consensus       249 li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          249 LMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            999999999999999999999999886553

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=1.3e-35  Score=248.33  Aligned_cols=178  Identities=22%  Similarity=0.402  Sum_probs=142.5

Q ss_pred             CcccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCC--cccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      +.+||++.++|.+.+....          ..++.|++.||+|||++|  |+||||||+|  |+++.++.+||+|||+++.
T Consensus       111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~N--Ill~~~~~~kL~Dfg~a~~  188 (309)
T 3p86_A          111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPN--LLVDKKYTVKVCDFGLSRL  188 (309)
T ss_dssp             EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGG--EEECTTCCEEECCCC----
T ss_pred             EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhh--EEEeCCCcEEECCCCCCcc
Confidence            3689998888888665421          235668889999999999  9999999999  9999999999999999986


Q ss_pred             cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcH
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      ..... .......||+.|+|||++.+..++.++||||||+++|+|++ |..||.+.+..+....+.........+..+++
T Consensus       189 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (309)
T 3p86_A          189 KASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELAT-LQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNP  266 (309)
T ss_dssp             --------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHH-CCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCH
T ss_pred             ccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCCCccCCH
Confidence            43322 22345678899999999999989999999999999999999 99999998888877777667777778889999


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ++.+++.+||+.||++|||+.++++.|+.+....
T Consensus       267 ~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          267 QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence            9999999999999999999999999998876654

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.1e-35  Score=251.75  Aligned_cols=181  Identities=22%  Similarity=0.432  Sum_probs=149.4

Q ss_pred             CcccccchhHHHHHhcCCCCC------------------------------CCchhhHHhhhhhhCCcccCCCCCCCceE
Q psy2787           1 MSANFAELNAFQENYTEPCRK------------------------------PLPPERRGYGTFSVNNICSCQFSSSSLLI   50 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~------------------------------~~~~~~~gl~~lH~~~iiHrdlkp~ni~i   50 (251)
                      +.+||++.++|.+.+......                              ++.|++.||+|||++||+||||||+|  |
T Consensus       126 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N--I  203 (344)
T 1rjb_A          126 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN--V  203 (344)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG--E
T ss_pred             EEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh--E
Confidence            468999888888877654321                              45688899999999999999999999  9


Q ss_pred             EEccCCceEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHH
Q psy2787          51 LFFSSSSSSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQI  129 (251)
Q Consensus        51 l~~~~~~~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~  129 (251)
                      +++.++.+||+|||++...... .........+|+.|+|||++.+..++.++||||||+++|+|++.|..||.+......
T Consensus       204 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~  283 (344)
T 1rjb_A          204 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  283 (344)
T ss_dssp             EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             EEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHH
Confidence            9999999999999999874332 223345566788899999999888999999999999999999769999988776555


Q ss_pred             HHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         130 LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       130 ~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      ...+...+...+.+..++.++.+++.+||+.||++|||+.+++++|+.+.....
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  337 (344)
T 1rjb_A          284 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE  337 (344)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred             HHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence            555556676777778899999999999999999999999999999998876654

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=4.5e-36  Score=257.65  Aligned_cols=177  Identities=27%  Similarity=0.547  Sum_probs=149.0

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+++...        ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus       189 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N--il~~~~~~~kl~DfG~s~~~~~~  266 (377)
T 3cbl_A          189 IVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARN--CLVTEKNVLKISDFGMSREEADG  266 (377)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCCEEECCGGGCEECTTS
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHH--EEEcCCCcEEECcCCCceecCCC
Confidence            468999888888765432        22356678899999999999999999999  99999999999999999875544


Q ss_pred             ceeec-CCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CYVMT-ERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .+... ....++..|+|||++.+..++.++|||||||++|||++.|..||.+....+....+ ..+.+.+.+..++.++.
T Consensus       267 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  345 (377)
T 3cbl_A          267 VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFV-EKGGRLPCPELCPDAVF  345 (377)
T ss_dssp             EEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHH-HTTCCCCCCTTCCHHHH
T ss_pred             ceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHH
Confidence            33322 23346778999999998889999999999999999998799999998877776666 45667777888999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +++.+||+.||++|||+.++++.|+.+..
T Consensus       346 ~li~~cl~~dP~~Rps~~~i~~~L~~i~~  374 (377)
T 3cbl_A          346 RLMEQCWAYEPGQRPSFSTIYQELQSIRK  374 (377)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999988764

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=2.7e-35  Score=261.19  Aligned_cols=177  Identities=28%  Similarity=0.563  Sum_probs=152.6

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |.+||++.++|.+++.....         .++.|++.||+|||+++|+||||||+|  ||++.++.+||+|||+++....
T Consensus       293 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~N--Ill~~~~~~kl~DFG~a~~~~~  370 (495)
T 1opk_A          293 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARN--CLVGENHLVKVADFGLSRLMTG  370 (495)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECGGGCEEECCTTCEECCTT
T ss_pred             EEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh--EEECCCCcEEEeecccceeccC
Confidence            46899999999887754222         234578899999999999999999999  9999999999999999998765


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||++.+..++.++|||||||++|||+++|..||.+.+..++...+ ..+.+.+.+..++.++.
T Consensus       371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  449 (495)
T 1opk_A          371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-EKDYRMERPEGCPEKVY  449 (495)
T ss_dssp             CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-HTTCCCCCCTTCCHHHH
T ss_pred             CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHH
Confidence            55555555667889999999998889999999999999999998789999998877777666 46667777889999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +++.+||+.||++|||+.++++.|+.+..
T Consensus       450 ~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          450 ELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             HHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence            99999999999999999999999988753

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.2e-35  Score=249.87  Aligned_cols=179  Identities=25%  Similarity=0.540  Sum_probs=147.3

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.+...        ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N--il~~~~~~~kl~Dfg~a~~~~~~~  169 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARN--VLLKSPSQVQVADFGVADLLPPDD  169 (325)
T ss_dssp             EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTT--EEESSSSCEEECSCSGGGGSCCCT
T ss_pred             EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchhe--EEECCCCeEEECCCCcccccCccc
Confidence            57899988888876543        12345678899999999999999999999  999999999999999998754332


Q ss_pred             -eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 -YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                       ........+|..|+|||++.+..++.++||||||+++|+|+++|..||.+....++...+ ..+.....+..++.++.+
T Consensus       170 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  248 (325)
T 3kex_A          170 KQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLL-EKGERLAQPQICTIDVYM  248 (325)
T ss_dssp             TCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHH-HTTCBCCCCTTBCTTTTH
T ss_pred             ccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHH-HcCCCCCCCCcCcHHHHH
Confidence             222344567788999999998899999999999999999998899999988777776666 455566667778889999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      ++.+||..||++|||+.+++++|..+.....
T Consensus       249 li~~~l~~dp~~Rps~~el~~~l~~~~~~~~  279 (325)
T 3kex_A          249 VMVKCWMIDENIRPTFKELANEFTRMARDPP  279 (325)
T ss_dssp             HHHHHTCSCTTTSCCHHHHHHHHHHHTTSHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence            9999999999999999999999998876543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=2.3e-35  Score=258.91  Aligned_cols=178  Identities=24%  Similarity=0.467  Sum_probs=144.9

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+++...         ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++....
T Consensus       255 iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~N--ill~~~~~~kl~DfG~a~~~~~  332 (452)
T 1fmk_A          255 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN--ILVGENLVCKVADFGLARLIED  332 (452)
T ss_dssp             EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGCEEECCCCTTC----
T ss_pred             EEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhh--EEECCCCCEEECCCccceecCC
Confidence            468999988888876532         12345678899999999999999999999  9999999999999999987654


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||++.+..++.++||||||+++|||++.|..||.+....++...+ ..+.+.+.+..++..+.
T Consensus       333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~  411 (452)
T 1fmk_A          333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLH  411 (452)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTSCHHHH
T ss_pred             CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHH
Confidence            44334445567788999999998899999999999999999998789999998888887776 45667777889999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +++.+||+.||++|||+.++++.|+.+...
T Consensus       412 ~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~  441 (452)
T 1fmk_A          412 DLMCQCWRKEPEERPTFEYLQAFLEDYFTS  441 (452)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence            999999999999999999999999887643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=9.8e-36  Score=254.69  Aligned_cols=180  Identities=24%  Similarity=0.492  Sum_probs=147.6

Q ss_pred             CcccccchhHHHHHhcCCC--------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC---ceEEccC
Q psy2787           1 MSANFAELNAFQENYTEPC--------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS---SSSSGDF   63 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~---~~kl~DF   63 (251)
                      +.+||++.++|.+.+....              ..++.|++.||+|||++||+||||||+|  |+++.++   .+||+||
T Consensus       151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~~~~~~~kL~DF  228 (367)
T 3l9p_A          151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN--CLLTCPGPGRVAKIGDF  228 (367)
T ss_dssp             EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEESCSSTTCCEEECCC
T ss_pred             EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhh--EEEecCCCCceEEECCC
Confidence            4689998888887665321              1245688899999999999999999999  9998554   5999999


Q ss_pred             CCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC
Q psy2787          64 GMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR  142 (251)
Q Consensus        64 Gla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~  142 (251)
                      |+++..... .........+|+.|+|||++.+..++.++|||||||++|||+++|..||.+....++...+. .+.....
T Consensus       229 G~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~-~~~~~~~  307 (367)
T 3l9p_A          229 GMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-SGGRMDP  307 (367)
T ss_dssp             HHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TTCCCCC
T ss_pred             ccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCC
Confidence            999863221 11223345678899999999988999999999999999999976999999988888877774 4555666


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      +..++.++.+++.+||+.||++|||+.+++++|+.+.....
T Consensus       308 ~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~  348 (367)
T 3l9p_A          308 PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  348 (367)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence            77899999999999999999999999999999998876543

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.3e-35  Score=240.68  Aligned_cols=177  Identities=24%  Similarity=0.501  Sum_probs=150.4

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+.....        .++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~N--il~~~~~~~kl~Dfg~~~~~~~~  159 (269)
T 4hcu_A           82 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN--CLVGENQVIKVSDFGMTRFVLDD  159 (269)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECGGGCEEECCTTGGGGBCCH
T ss_pred             EEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchhe--EEEcCCCCEEecccccccccccc
Confidence            35799988888887654322        245677899999999999999999999  99999999999999999876554


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........++..|+|||++.+..++.++||||+|+++|+|++.|..||.+....+....+. .+.....+..++.++.+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  238 (269)
T 4hcu_A          160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQ  238 (269)
T ss_dssp             HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTSCHHHHH
T ss_pred             ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh-cCccCCCCCcCCHHHHH
Confidence            44445556678889999999988999999999999999999987899999988888777764 45566667778999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ++.+||+.||++|||+.+++++|..+..
T Consensus       239 li~~~l~~~p~~Rps~~~ll~~l~~l~~  266 (269)
T 4hcu_A          239 IMNHCWRERPEDRPAFSRLLRQLAEIAE  266 (269)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence            9999999999999999999999988764

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.3e-35  Score=251.92  Aligned_cols=178  Identities=26%  Similarity=0.552  Sum_probs=149.9

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +++||++.++|.+.+....                       ..++.|++.||+|||+++|+||||||+|  |+++.++.
T Consensus       152 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~  229 (382)
T 3tt0_A          152 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN--VLVTEDNV  229 (382)
T ss_dssp             EEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTCC
T ss_pred             EEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce--EEEcCCCc
Confidence            4689998888888665432                       2335678899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+++...... ........+|+.|+|||++.+..++.++|||||||++|+|++.|..||.+....++...+ ..
T Consensus       230 ~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~-~~  308 (382)
T 3tt0_A          230 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KE  308 (382)
T ss_dssp             EEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HT
T ss_pred             EEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-Hc
Confidence            9999999998754332 223344567888999999999899999999999999999998789999998887777766 45


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +.....+..++.++.+++.+||+.||++|||+.+++++|+.+...
T Consensus       309 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          309 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            556667788999999999999999999999999999999888644

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=6e-35  Score=245.83  Aligned_cols=178  Identities=27%  Similarity=0.526  Sum_probs=147.1

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.+++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N--Ill~~~~~~kl~Dfg~a~~~~~~  204 (325)
T 3kul_A          127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARN--VLVDSNLVCKVSDFGLSRVLEDD  204 (325)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCCEEECCCSSCEECC--
T ss_pred             EEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce--EEECCCCCEEECCCCcccccccC
Confidence            4689998888888765332        2345677799999999999999999999  99999999999999999875433


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .  ........+|+.|+|||++.+..++.++||||||+++|+|+++|..||.+....+....+. .+...+.+..++.++
T Consensus       205 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  283 (325)
T 3kul_A          205 PDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-EGYRLPAPMGCPHAL  283 (325)
T ss_dssp             --CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCHHH
T ss_pred             ccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-cCCCCCCCCCcCHHH
Confidence            2  2223344567789999999988899999999999999999987999999988888777764 556677778899999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .+++.+||..||++|||+.++++.|+.+...
T Consensus       284 ~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          284 HQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999887643

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=6.1e-35  Score=256.09  Aligned_cols=174  Identities=22%  Similarity=0.545  Sum_probs=146.4

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |.+||++.++|.+++....         ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++....
T Consensus       264 iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N--ill~~~~~~kl~DfG~a~~~~~  341 (450)
T 1k9a_A          264 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN--VLVSEDNVAKVSDFGLTKEASS  341 (450)
T ss_dssp             EEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEECTTSCEEECCCTTCEECC-
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhh--EEECCCCCEEEeeCCCcccccc
Confidence            4689998888887665432         2345677899999999999999999999  9999999999999999986433


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .    .....++..|+|||++.+..++.++||||||+++|||+++|..||.+.+..+....+ ..+.+++.+..+++++.
T Consensus       342 ~----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~~p~~~~~~l~  416 (450)
T 1k9a_A          342 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVY  416 (450)
T ss_dssp             ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHH-HTTCCCCCCTTCCHHHH
T ss_pred             c----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCcCCHHHH
Confidence            2    122356788999999999999999999999999999998799999988877777776 45677778889999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +++.+||+.||++|||+.++++.|+.+...
T Consensus       417 ~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          417 DVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            999999999999999999999999887643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=2.4e-35  Score=248.66  Aligned_cols=170  Identities=14%  Similarity=0.207  Sum_probs=144.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        91 lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~N--Ill~~~~~~kl~DFG~a~~~~~~~  168 (328)
T 3fe3_A           91 LIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAEN--LLLDADMNIKIADFGFSNEFTVGG  168 (328)
T ss_dssp             EEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTSCEEECSTTCCGGGSSSC
T ss_pred             EEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHH--EEEcCCCCEEEeeccCceecCCCC
Confidence            468999988888765322       23456788999999999999999999999  999999999999999998754332


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFS-QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        ......||+.|+|||++.+..+. .++||||+||++|+|++ |..||.+.+..++...+.....  ..|..++.++.+
T Consensus       169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~  243 (328)
T 3fe3_A          169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS-GSLPFDGQNLKELRERVLRGKY--RIPFYMSTDCEN  243 (328)
T ss_dssp             --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHH
T ss_pred             --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHH
Confidence              23456789999999999887765 79999999999999999 9999999988888888866544  445678999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+||..||++|||+.++++|.+-
T Consensus       244 li~~~L~~dP~~R~t~~eil~h~~~  268 (328)
T 3fe3_A          244 LLKRFLVLNPIKRGTLEQIMKDRWI  268 (328)
T ss_dssp             HHHHHCCSSTTTSCCHHHHTTCTTT
T ss_pred             HHHHHCCCChhHCcCHHHHhcCHhh
Confidence            9999999999999999999998664

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2.9e-35  Score=247.91  Aligned_cols=178  Identities=24%  Similarity=0.528  Sum_probs=146.0

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+..++|.+.+....        ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~N--Ill~~~~~~kl~Dfg~a~~~~~~~  171 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN--VLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEEEETTEEEECCTTHHHHHTTTC
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChhe--EEECCCCCEEEccCcceeEccCCc
Confidence            467888888888665432        2346678899999999999999999999  999999999999999998754332


Q ss_pred             -eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 -YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                       ........+|..|+|||++.+..++.++|||||||++|||+++|..||.+....++...+ ..+...+.+..++.++.+
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  250 (327)
T 3poz_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGERLPQPPICTIDVYM  250 (327)
T ss_dssp             C-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-HTTCCCCCCTTBCHHHHH
T ss_pred             ccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHH-HcCCCCCCCccCCHHHHH
Confidence             222334456788999999999999999999999999999998789999988777766655 455666777889999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ++.+||+.||++|||+.+++++|..+....
T Consensus       251 li~~~l~~~p~~Rps~~ell~~l~~~~~~~  280 (327)
T 3poz_A          251 IMVKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             HHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred             HHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence            999999999999999999999998876543

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=2.4e-35  Score=241.27  Aligned_cols=178  Identities=23%  Similarity=0.479  Sum_probs=150.3

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...        ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++......
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N--il~~~~~~~~l~Dfg~~~~~~~~  157 (268)
T 3sxs_A           80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARN--CLVDRDLCVKVSDFGMTRYVLDD  157 (268)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGG--EEECTTCCEEECCTTCEEECCTT
T ss_pred             EEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcce--EEECCCCCEEEccCccceecchh
Confidence            357888888777755432        23456778899999999999999999999  99999999999999999886666


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........+|..|+|||++.+..++.++||||+|+++|+|++.|..||.+....+....+. .+.....+..++..+.+
T Consensus       158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~  236 (268)
T 3sxs_A          158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHRLYRPHLASDTIYQ  236 (268)
T ss_dssp             CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTSCHHHHH
T ss_pred             hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH-cCCCCCCCCcChHHHHH
Confidence            55555666778889999999988889999999999999999987899999888777777664 45555666778999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ++.+||+.||++|||+.+++++|+.+...
T Consensus       237 li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          237 IMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            99999999999999999999999988754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=3.8e-35  Score=248.11  Aligned_cols=180  Identities=27%  Similarity=0.560  Sum_probs=146.8

Q ss_pred             CcccccchhHHHHHhcCCC-------------------------------CCCCchhhHHhhhhhhCCcccCCCCCCCce
Q psy2787           1 MSANFAELNAFQENYTEPC-------------------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLL   49 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------------------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~   49 (251)
                      +.+||++.++|.+++....                               ..++.|++.||+|||++||+||||||+|  
T Consensus       127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N--  204 (343)
T 1luf_A          127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRN--  204 (343)
T ss_dssp             EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--
T ss_pred             EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcce--
Confidence            3578888888887665421                               1146678899999999999999999999  


Q ss_pred             EEEccCCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH
Q psy2787          50 ILFFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ  128 (251)
Q Consensus        50 il~~~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~  128 (251)
                      |+++.++.+||+|||+++...... ........+|+.|+|||++.+..++.++||||||+++|+|+++|..||.+....+
T Consensus       205 Il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  284 (343)
T 1luf_A          205 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEE  284 (343)
T ss_dssp             EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             EEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCChHH
Confidence            999999999999999998743322 1233445678899999999988899999999999999999987899999988877


Q ss_pred             HHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         129 ILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       129 ~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      +...+. .+.....+..++.++.+++.+||+.||++|||+.+++++|..+.....
T Consensus       285 ~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~  338 (343)
T 1luf_A          285 VIYYVR-DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE  338 (343)
T ss_dssp             HHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred             HHHHHh-CCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence            777764 455556677899999999999999999999999999999998876543

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=2e-35  Score=245.71  Aligned_cols=173  Identities=16%  Similarity=0.229  Sum_probs=143.6

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.+...      ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++........
T Consensus        94 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~~  171 (297)
T 3fxz_A           94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN--ILLGMDGSVKLTDFGFCAQITPEQS  171 (297)
T ss_dssp             EEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EEEECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHH--EEECCCCCEEEeeCCCceecCCccc
Confidence            468999888888876543      23456778899999999999999999999  9999999999999999987544322


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-CCCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~l  153 (251)
                       ......||+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+.......+... ......+..++..+.++
T Consensus       172 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  249 (297)
T 3fxz_A          172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF  249 (297)
T ss_dssp             -CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHH
T ss_pred             -ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHH
Confidence             3345678999999999999999999999999999999999 99999888766655554333 33344566789999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+||+.||++|||+.++++|.+-
T Consensus       250 i~~~l~~dp~~Rps~~ell~h~~~  273 (297)
T 3fxz_A          250 LNRCLEMDVEKRGSAKELLQHQFL  273 (297)
T ss_dssp             HHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred             HHHHccCChhHCcCHHHHhhChhh
Confidence            999999999999999999987653

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=5.6e-35  Score=244.06  Aligned_cols=177  Identities=25%  Similarity=0.567  Sum_probs=147.8

Q ss_pred             CcccccchhHHHHHhcCCCC-------------------------------CCCchhhHHhhhhhhCCcccCCCCCCCce
Q psy2787           1 MSANFAELNAFQENYTEPCR-------------------------------KPLPPERRGYGTFSVNNICSCQFSSSSLL   49 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~-------------------------------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~   49 (251)
                      +.+||++.++|.+.+.....                               .++.|++.||+|||++||+||||||+|  
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N--  180 (314)
T 2ivs_A          103 LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN--  180 (314)
T ss_dssp             EEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--
T ss_pred             EEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchhe--
Confidence            35788888888876654321                               245688899999999999999999999  


Q ss_pred             EEEccCCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH
Q psy2787          50 ILFFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ  128 (251)
Q Consensus        50 il~~~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~  128 (251)
                      |+++.++.+||+|||+++...... ........+++.|+|||++.+..++.++||||+|+++|+|++.|..||.+.....
T Consensus       181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~  260 (314)
T 2ivs_A          181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER  260 (314)
T ss_dssp             EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence            999999999999999998754332 2233445677889999999988899999999999999999987899999888777


Q ss_pred             HHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         129 ILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       129 ~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +...+ ..+.....+..++.++.+++.+||+.||++|||+.+++++|+.+..
T Consensus       261 ~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~  311 (314)
T 2ivs_A          261 LFNLL-KTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV  311 (314)
T ss_dssp             HHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHh-hcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            77666 3555666777899999999999999999999999999999988754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=9.3e-35  Score=239.56  Aligned_cols=177  Identities=24%  Similarity=0.484  Sum_probs=150.0

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N--ili~~~~~~kl~Dfg~~~~~~~~  173 (283)
T 3gen_A           96 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN--CLVNDQGVVKVSDFGLSRYVLDD  173 (283)
T ss_dssp             EEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGG--EEECTTSCEEECSTTGGGGBCCH
T ss_pred             EEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccce--EEEcCCCCEEEcccccccccccc
Confidence            3578998888888765421        2346677899999999999999999999  99999999999999999876554


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........+|+.|+|||++.+..++.++||||+|+++|+|++.|..||.+....+....+. .+.....+..++..+.+
T Consensus       174 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~  252 (283)
T 3gen_A          174 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYRPHLASEKVYT  252 (283)
T ss_dssp             HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCHHHHH
T ss_pred             ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHh-cccCCCCCCcCCHHHHH
Confidence            44444556677889999999988899999999999999999976999999988877777764 45556666788999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ++.+||+.||++|||+.+++++|..+..
T Consensus       253 li~~~l~~~p~~Rps~~~ll~~L~~~~~  280 (283)
T 3gen_A          253 IMYSCWHEKADERPTFKILLSNILDVMD  280 (283)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence            9999999999999999999999988764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=1.1e-34  Score=245.54  Aligned_cols=172  Identities=16%  Similarity=0.205  Sum_probs=145.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|...+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        82 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~g~vkL~DFG~a~~~~~~~  159 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN--LMLDKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTSCEEECCCTTCBCSCCTT
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHH--EEECCCCCEEEeeccchhhcccCC
Confidence            468999998888765432       22346788899999999999999999999  999999999999999998633221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+.....  ..+..+++++.++
T Consensus       160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~l  235 (337)
T 1o6l_A          160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELILMEEI--RFPRTLSPEAKSL  235 (337)
T ss_dssp             -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHH
T ss_pred             -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhc-CCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHH
Confidence             12345678999999999999899999999999999999999 9999999888888888766543  4456789999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~~  178 (251)
                      +.+||+.||++||     ++.++++|.+..
T Consensus       236 i~~lL~~dP~~R~g~~~~~~~ei~~h~~f~  265 (337)
T 1o6l_A          236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFFL  265 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred             HHHHhhcCHHHhcCCCCCCHHHHHcCCCcC
Confidence            9999999999999     899999987654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=1.1e-34  Score=239.11  Aligned_cols=179  Identities=27%  Similarity=0.565  Sum_probs=144.4

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~  167 (281)
T 3cc6_A           90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRN--ILVASPECVKLGDFGLSRYIEDED  167 (281)
T ss_dssp             EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG--EEEEETTEEEECCCCGGGCC----
T ss_pred             EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccce--EEECCCCcEEeCccCCCccccccc
Confidence            578888777777654321        2335688899999999999999999999  999999999999999998765544


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      ........++..|+|||++.+..++.++||||||+++|+|+++|..||......+....+. .+...+.+..+++.+.++
T Consensus       168 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l  246 (281)
T 3cc6_A          168 YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLE-KGDRLPKPDLCPPVLYTL  246 (281)
T ss_dssp             -----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHH-HTCCCCCCTTCCHHHHHH
T ss_pred             ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHh-cCCCCCCCCCCCHHHHHH
Confidence            3344455678889999999988899999999999999999976999998877766666654 445566677899999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      +.+||+.||++|||+.+++++|+.+.....
T Consensus       247 i~~~l~~~p~~Rps~~ell~~L~~~~~~~~  276 (281)
T 3cc6_A          247 MTRCWDYDPSDRPRFTELVCSLSDVYQMEK  276 (281)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence            999999999999999999999998876544

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=8.5e-35  Score=243.20  Aligned_cols=179  Identities=26%  Similarity=0.470  Sum_probs=147.4

Q ss_pred             cccccchhHHHHHhcCCCC-----------------------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCce
Q psy2787           2 SANFAELNAFQENYTEPCR-----------------------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSS   58 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~~-----------------------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~   58 (251)
                      .+||++.++|.+.+.....                       .++.|++.||+|||++||+||||||+|  |+++.++.+
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~N--il~~~~~~~  187 (316)
T 2xir_A          110 IVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN--ILLSEKNVV  187 (316)
T ss_dssp             EEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGCE
T ss_pred             EEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccce--EEECCCCCE
Confidence            5789988888887764332                       134578899999999999999999999  999999999


Q ss_pred             EEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC
Q psy2787          59 SSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG  137 (251)
Q Consensus        59 kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~  137 (251)
                      ||+|||+++..... .........+|+.|+|||++.+..++.++||||||+++|+|+++|..||.+....+........+
T Consensus       188 kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~  267 (316)
T 2xir_A          188 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEG  267 (316)
T ss_dssp             EECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHT
T ss_pred             EECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccC
Confidence            99999999874332 23344456678889999999988899999999999999999976999998866544443333455


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      .....+..+++++.+++.+||+.||++|||+.+++++|..+....
T Consensus       268 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  312 (316)
T 2xir_A          268 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  312 (316)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence            566667789999999999999999999999999999999887553

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=9.9e-35  Score=242.46  Aligned_cols=179  Identities=24%  Similarity=0.515  Sum_probs=147.7

Q ss_pred             CcccccchhHHHHHhcCCCC-------------------------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC
Q psy2787           1 MSANFAELNAFQENYTEPCR-------------------------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS   55 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~-------------------------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~   55 (251)
                      +.+||++.++|.+.+.....                         .++.|++.||+|||++||+||||||+|  |+++.+
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--il~~~~  181 (313)
T 1t46_A          104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN--ILLTHG  181 (313)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEEETT
T ss_pred             EEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce--EEEcCC
Confidence            35789888888876654321                         234577899999999999999999999  999999


Q ss_pred             CceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy2787          56 SSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKID  134 (251)
Q Consensus        56 ~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~  134 (251)
                      +.+||+|||+++...... ........+|..|+|||++.+..++.++||||||+++|+|+++|..||.+...........
T Consensus       182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  261 (313)
T 1t46_A          182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (313)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHh
Confidence            999999999998754432 2334455678889999999988899999999999999999987899998876555555554


Q ss_pred             hcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         135 REGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ........+..++.++.+++.+||+.||.+|||+.+++++|..+...
T Consensus       262 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            56666666778999999999999999999999999999999887654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-34  Score=248.06  Aligned_cols=178  Identities=24%  Similarity=0.474  Sum_probs=138.2

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+++.....        .++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       168 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~~~~kL~DFG~a~~~~~~  245 (373)
T 3c1x_A          168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARN--CMLDEKFTVKVADFGLARDMYDK  245 (373)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTCCEEECCC---------
T ss_pred             EEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchhe--EEECCCCCEEEeecccccccccc
Confidence            36799999999887764332        234578899999999999999999999  99999999999999999865433


Q ss_pred             cee---ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          73 CYV---MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        73 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      ...   ......+|..|+|||++.+..++.++||||||+++|||+++|.+||.+.+..+....+. .+.+...+..++.+
T Consensus       246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~-~~~~~~~p~~~~~~  324 (373)
T 3c1x_A          246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDP  324 (373)
T ss_dssp             ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH-TTCCCCCCTTCCHH
T ss_pred             ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHH
Confidence            211   22334567889999999988999999999999999999996778888877666666553 45566667789999


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +.+++.+||+.||++|||+.+++++|..+...
T Consensus       325 l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~  356 (373)
T 3c1x_A          325 LYEVMLKCWHPKAEMRPSFSELVSRISAIFST  356 (373)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999999999887654

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=7.2e-35  Score=260.73  Aligned_cols=178  Identities=24%  Similarity=0.467  Sum_probs=152.0

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+++...         ...++.|++.||+|||+++|+||||||+|  ||++.++.+||+|||+++....
T Consensus       338 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~N--Ill~~~~~~kl~DFG~a~~~~~  415 (535)
T 2h8h_A          338 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN--ILVGENLVCKVADFGLARLIED  415 (535)
T ss_dssp             EEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGCEEECCTTSTTTCCC
T ss_pred             EeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhh--EEEcCCCcEEEcccccceecCC
Confidence            468999988888876532         12345688899999999999999999999  9999999999999999987654


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||++.+..++.++|||||||++|||++.|..||.+....++...+ ..+.+.+.+..++.++.
T Consensus       416 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~  494 (535)
T 2h8h_A          416 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLH  494 (535)
T ss_dssp             HHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCHHHH
T ss_pred             CceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHH
Confidence            43333445567788999999998899999999999999999999789999998888887777 45667777888999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ++|.+||+.||++|||+.+|++.|+.+...
T Consensus       495 ~li~~cl~~dP~~RPt~~~l~~~L~~~~~~  524 (535)
T 2h8h_A          495 DLMCQCWRKEPEERPTFEYLQAFLEDYFTS  524 (535)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred             HHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence            999999999999999999999999887643

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.4e-34  Score=262.57  Aligned_cols=179  Identities=24%  Similarity=0.518  Sum_probs=147.7

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.++|.+++.....        .++.|++.||+|||+++|+||||||+|  ||++.++.+||+|||+++.....
T Consensus       412 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~N--ILl~~~~~vkL~DFGla~~~~~~  489 (613)
T 2ozo_A          412 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARN--VLLVNRHYAKISDFGLSKALGAD  489 (613)
T ss_dssp             EEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEEEETTEEEECCCSTTTTCC--
T ss_pred             EEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHH--EEEcCCCcEEEeeccCcccccCC
Confidence            46899999999987754322        345678899999999999999999999  99999999999999999875432


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .  ........+|+.|+|||++.+..++.++|||||||++|||+++|..||.+.+..++...+. .+.+.+.+..++.++
T Consensus       490 ~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~~~~l  568 (613)
T 2ozo_A          490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPECPPEL  568 (613)
T ss_dssp             ------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH-TTCCCCCCTTCCHHH
T ss_pred             CceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCCCcCCHHH
Confidence            2  1222334456789999999988999999999999999999977999999988888877774 566777888899999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      .+++.+||..||++||++.++++.|..+....
T Consensus       569 ~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~  600 (613)
T 2ozo_A          569 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  600 (613)
T ss_dssp             HHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence            99999999999999999999999998876554

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=2.7e-34  Score=238.69  Aligned_cols=172  Identities=19%  Similarity=0.220  Sum_probs=141.4

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      |.+||++.++|.+.....      ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.......
T Consensus       115 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~~  192 (298)
T 2zv2_A          115 MVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSN--LLVGEDGHIKIADFGVSNEFKGSDA  192 (298)
T ss_dssp             EEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTSCEEECCCTTCEECSSSSC
T ss_pred             EEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH--EEECCCCCEEEecCCCccccccccc
Confidence            357888888776643321      12245678899999999999999999999  9999999999999999987554322


Q ss_pred             eecCCCCcCcccCCCcccCCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQ---FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                       ......+|+.|+|||++.+..   ++.++|||||||++|+|++ |..||.+.........+.......+....++.++.
T Consensus       193 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  270 (298)
T 2zv2_A          193 -LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVF-GQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLK  270 (298)
T ss_dssp             -EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHH
T ss_pred             -cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHH-CCCCCCCccHHHHHHHHhcccCCCCCccccCHHHH
Confidence             234457899999999998765   3788999999999999999 99999988877777777666555555667999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +++.+||+.||++|||+.++++|.+
T Consensus       271 ~li~~~l~~dp~~R~s~~e~l~hp~  295 (298)
T 2zv2_A          271 DLITRMLDKNPESRIVVPEIKLHPW  295 (298)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHTTCHH
T ss_pred             HHHHHHhhcChhhCCCHHHHhcCcc
Confidence            9999999999999999999998765

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=3.8e-34  Score=250.40  Aligned_cols=173  Identities=13%  Similarity=0.199  Sum_probs=145.6

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc---cCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF---SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~---~~~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++   .++.+||+|||+++...
T Consensus        87 lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~N--Ill~~~~~~~~vkL~DFG~a~~~~  164 (444)
T 3soa_A           87 LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPEN--LLLASKLKGAAVKLADFGLAIEVE  164 (444)
T ss_dssp             EEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTT--EEESBSSTTCCEEECCCSSCBCCC
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH--EEEeccCCCCcEEEccCceeEEec
Confidence            468999999998866432       23356788899999999999999999999  8887   45789999999998755


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      .... ......||+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..++...+.......+.+  ..+++
T Consensus       165 ~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  242 (444)
T 3soa_A          165 GEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV-GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP  242 (444)
T ss_dssp             TTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCH
T ss_pred             CCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHh-CCCCCCCccHHHHHHHHHhCCCCCCccccccCCH
Confidence            4322 2345678999999999999899999999999999999999 999999998888888887665554433  57899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+++.+||+.||++|||+.++++|.+-
T Consensus       243 ~~~~li~~~L~~dP~~Rpta~e~L~hp~~  271 (444)
T 3soa_A          243 EAKDLINKMLTINPSKRITAAEALKHPWI  271 (444)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSCTT
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHhcCccc
Confidence            99999999999999999999999998654

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3.6e-35  Score=247.53  Aligned_cols=181  Identities=21%  Similarity=0.484  Sum_probs=148.2

Q ss_pred             CcccccchhHHHHHhcCC---------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceE
Q psy2787           1 MSANFAELNAFQENYTEP---------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSS   59 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~k   59 (251)
                      +.+||++.++|.+.+...                     ...++.|++.||+|||++||+||||||+|  |+++.++.+|
T Consensus       127 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N--Il~~~~~~~k  204 (333)
T 2i1m_A          127 VITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARN--VLLTNGHVAK  204 (333)
T ss_dssp             EEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--CEEEGGGEEE
T ss_pred             EEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccce--EEECCCCeEE
Confidence            357888888887755421                     12245688899999999999999999999  9999999999


Q ss_pred             EccCCCCcccCC-CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC
Q psy2787          60 SGDFGMMRYSQN-DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE  138 (251)
Q Consensus        60 l~DFGla~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~  138 (251)
                      |+|||+++.... ..........+|..|+|||++.+..++.++||||||+++|+|+++|..||.+.........+...+.
T Consensus       205 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~  284 (333)
T 2i1m_A          205 IGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGY  284 (333)
T ss_dssp             BCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTC
T ss_pred             ECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCC
Confidence            999999986432 2233344566788899999999888999999999999999999878899988766555555556666


Q ss_pred             CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         139 RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      ....+..++..+.+++.+||+.||++|||+.+++++|..+.....
T Consensus       285 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  329 (333)
T 2i1m_A          285 QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR  329 (333)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence            666777889999999999999999999999999999988766543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3.9e-35  Score=254.11  Aligned_cols=175  Identities=15%  Similarity=0.177  Sum_probs=148.1

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      |++||++.|+|.+.+...      ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.......
T Consensus       146 lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~N--ILl~~~g~ikL~DFG~a~~~~~~~~  223 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDN--MLLDKSGHLKLADFGTCMKMNKEGM  223 (410)
T ss_dssp             EEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECCTTSE
T ss_pred             EEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHH--eeECCCCCEEEeccceeEeeccCCc
Confidence            468999999998866532      22346678899999999999999999999  9999999999999999988766555


Q ss_pred             eecCCCCcCcccCCCcccCCCC----CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC--CCCCCCCCCcH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQ----FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG--ERLPRPEACPV  148 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~----~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~  148 (251)
                      .......||+.|+|||++.+..    ++.++|||||||++|||++ |..||.+.+..+....+....  ...+....++.
T Consensus       224 ~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~  302 (410)
T 3v8s_A          224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV-GDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISK  302 (410)
T ss_dssp             EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCH
T ss_pred             ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHh-CCCCCCCCChhhHHHHHHhccccccCCCcccccH
Confidence            5566778999999999998655    7889999999999999999 999999988888888876543  33344457999


Q ss_pred             HHHHHHHHHhccCCCC--CCCHHHHHHHHHhh
Q psy2787         149 EVYALMRQCWSKNPAE--RPKFSTLKDCLYRL  178 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~--Rps~~~il~~l~~~  178 (251)
                      ++.+++.+||..+|.+  ||++.+|++|.+.-
T Consensus       303 ~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~  334 (410)
T 3v8s_A          303 EAKNLICAFLTDREVRLGRNGVEEIKRHLFFK  334 (410)
T ss_dssp             HHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGC
T ss_pred             HHHHHHHHHccChhhhCCCCCHHHHhcCcccc
Confidence            9999999999999988  99999999997653

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=4.3e-35  Score=250.29  Aligned_cols=178  Identities=13%  Similarity=0.086  Sum_probs=136.3

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc--cCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF--SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~--~~~~~kl~DFGla~~~~   70 (251)
                      |.+||+ .++|.+.+....        ..++.|++.||+|||+++|+||||||+|  |+++  .++.+||+|||+++...
T Consensus       129 lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~N--ill~~~~~~~~kl~DFG~a~~~~  205 (364)
T 3op5_A          129 MIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASN--LLLNYKNPDQVYLVDYGLAYRYC  205 (364)
T ss_dssp             EEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEEESSCTTCEEECCCTTCEESS
T ss_pred             EEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHH--EEEecCCCCeEEEEECCcceecc
Confidence            467888 788887665421        2346678899999999999999999999  8888  88999999999998754


Q ss_pred             CCcee------ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC----
Q psy2787          71 NDCYV------MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL----  140 (251)
Q Consensus        71 ~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~----  140 (251)
                      .....      ......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.................    
T Consensus       206 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  284 (364)
T 3op5_A          206 PEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLT-GHLPWEDNLKDPKYVRDSKIRYRENIAS  284 (364)
T ss_dssp             GGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SCCTTGGGTTCHHHHHHHHHHHHHCHHH
T ss_pred             cCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHh-CCCCccccccCHHHHHHHHHHhhhhHHH
Confidence            32211      1133458999999999999999999999999999999999 999998632221111110100000    


Q ss_pred             -----CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         141 -----PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       141 -----~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                           .....++.++.+++..||+.+|++||++.++++.|..+....
T Consensus       285 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~  331 (364)
T 3op5_A          285 LMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI  331 (364)
T ss_dssp             HHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence                 012567899999999999999999999999999998877654

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=2e-35  Score=251.52  Aligned_cols=172  Identities=16%  Similarity=0.179  Sum_probs=141.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|...+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus       101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N--ILl~~~g~ikL~DFG~a~~~~~~~  178 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDN--VLLDHEGHCKLADFGMCKEGICNG  178 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTSCEEECCCTTCBCSCC--
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHH--EEECCCCCEEEccccceeecccCC
Confidence            468999999988766432       23356788899999999999999999999  999999999999999998633221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+.....  ..+..++.++.++
T Consensus       179 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~l  254 (353)
T 3txo_A          179 -VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC-GHAPFEAENEDDLFEAILNDEV--VYPTWLHEDATGI  254 (353)
T ss_dssp             --------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHH
T ss_pred             -ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHHHH
Confidence             23345678999999999998889999999999999999999 9999999998888888876543  3456789999999


Q ss_pred             HHHHhccCCCCCCCH------HHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERPKF------STLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rps~------~~il~~l~~~  178 (251)
                      +.+||..||++||++      .++++|.+.-
T Consensus       255 i~~lL~~dP~~R~~~~~~~~~~~il~hp~f~  285 (353)
T 3txo_A          255 LKSFMTKNPTMRLGSLTQGGEHAILRHPFFK  285 (353)
T ss_dssp             HHHHTCSSGGGSTTSGGGTCTHHHHTSGGGT
T ss_pred             HHHHhhhCHHHccCCcccCCHHHHhhCCccc
Confidence            999999999999998      8888876643

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.2e-34  Score=237.29  Aligned_cols=172  Identities=26%  Similarity=0.505  Sum_probs=139.1

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCC---cccCCCCCCCceEEEcc--------CCceEEccC
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNN---ICSCQFSSSSLLILFFS--------SSSSSSGDF   63 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~---iiHrdlkp~ni~il~~~--------~~~~kl~DF   63 (251)
                      +.+||++.++|.+.....      ...++.|++.||+|||+++   |+||||||+|  |+++.        ++.+||+||
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~N--il~~~~~~~~~~~~~~~kl~Df  160 (271)
T 3dtc_A           83 LVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSN--ILILQKVENGDLSNKILKITDF  160 (271)
T ss_dssp             EEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGG--EEESSCCSSSCCSSCCEEECCC
T ss_pred             EEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHH--EEEecccccccccCcceEEccC
Confidence            367899988888876532      1234567789999999999   8999999999  99886        678999999


Q ss_pred             CCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC
Q psy2787          64 GMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP  143 (251)
Q Consensus        64 Gla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  143 (251)
                      |++.......   .....+++.|+|||++.+..++.++||||+|+++|+|++ |..||.+.+.......+.......+.+
T Consensus       161 g~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~  236 (271)
T 3dtc_A          161 GLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT-GEVPFRGIDGLAVAYGVAMNKLALPIP  236 (271)
T ss_dssp             CC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH-CCCTTTTSCHHHHHHHHHTSCCCCCCC
T ss_pred             Cccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHhhhcCCCCCCCC
Confidence            9998654432   234568889999999998889999999999999999999 999999988777777776667777778


Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       144 ~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ..++.++.+++.+||+.||++|||+.+++++|+.+
T Consensus       237 ~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          237 STCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             cccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            88999999999999999999999999999999754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=8.8e-35  Score=264.64  Aligned_cols=178  Identities=25%  Similarity=0.551  Sum_probs=147.3

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+++....       ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus       446 lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~N--ILl~~~~~~kL~DFGla~~~~~~~  523 (635)
T 4fl3_A          446 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN--VLLVTQHYAKISDFGLSKALRADE  523 (635)
T ss_dssp             EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEEEETTEEEECCTTHHHHTTC--
T ss_pred             EEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHh--EEEeCCCCEEEEEcCCccccccCc
Confidence            4689999999988765332       2456688899999999999999999999  999999999999999998754332


Q ss_pred             --eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          74 --YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        74 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                        ........+|+.|+|||++.+..++.++|||||||++|||+++|..||.+....++...+ ..+.+...+..++.++.
T Consensus       524 ~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i-~~~~~~~~p~~~~~~l~  602 (635)
T 4fl3_A          524 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-EKGERMGCPAGCPREMY  602 (635)
T ss_dssp             -----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCHHHH
T ss_pred             cccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHH
Confidence              222334456788999999999899999999999999999997799999998888877776 45667777889999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +++.+||+.||++||++.++++.|..+...
T Consensus       603 ~li~~cl~~dP~~RPs~~~l~~~L~~~~~~  632 (635)
T 4fl3_A          603 DLMNLCWTYDVENRPGFAAVELRLRNYYYD  632 (635)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            999999999999999999999999887654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.1e-34  Score=247.65  Aligned_cols=173  Identities=12%  Similarity=0.165  Sum_probs=145.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC----ceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS----SSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~----~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++    .+||+|||+++..
T Consensus        92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~N--Ill~~~~~~~~~vkl~DFG~a~~~  169 (361)
T 2yab_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN--IMLLDKNIPIPHIKLIDFGLAHEI  169 (361)
T ss_dssp             EEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEESCTTSSSCCEEECCCSSCEEC
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEEeCCCCCccCEEEEecCCceEc
Confidence            468999999999877542       22356778899999999999999999999  9998776    7999999999875


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCc
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACP  147 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~  147 (251)
                      ....  ......||+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+....+.......+.  ...++
T Consensus       170 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  246 (361)
T 2yab_A          170 EDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANITAVSYDFDEEFFSQTS  246 (361)
T ss_dssp             CTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred             CCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC
Confidence            5432  2345678999999999999899999999999999999999 99999998888888887654443322  25688


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .++.+++.+||..||++|||+.++++|.+-.
T Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          247 ELAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (361)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence            9999999999999999999999999987643

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.4e-34  Score=242.39  Aligned_cols=179  Identities=25%  Similarity=0.536  Sum_probs=141.8

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+..++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N--Il~~~~~~~kL~DfG~a~~~~~~~  171 (327)
T 3lzb_A           94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN--VLVKTPQHVKITDFGLAKLLGAEE  171 (327)
T ss_dssp             EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEEEETTEEEECCTTC--------
T ss_pred             EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHH--EEEcCCCCEEEccCcceeEccCcc
Confidence            467788888887664322        2346678899999999999999999999  999999999999999998754332


Q ss_pred             -eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 -YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                       ........+|..|+|||++.+..++.++||||||+++|+|+++|..||.+....++...+ ..+...+.+..++.++.+
T Consensus       172 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~  250 (327)
T 3lzb_A          172 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGERLPQPPICTIDVYM  250 (327)
T ss_dssp             --------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHH-HTTCCCCCCTTBCHHHHH
T ss_pred             ccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH-HcCCCCCCCccCCHHHHH
Confidence             122334456778999999999999999999999999999998799999988877776665 456666777889999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      ++.+||..||++|||+.++++.|..+.....
T Consensus       251 li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  281 (327)
T 3lzb_A          251 IMRKCWMIDADSRPKFRELIIEFSKMARDPQ  281 (327)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHTSHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHHhCcC
Confidence            9999999999999999999999998875543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=9.8e-35  Score=247.19  Aligned_cols=171  Identities=18%  Similarity=0.240  Sum_probs=144.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N--Ill~~~g~vkL~DFG~a~~~~~~~  175 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN--VMLDSEGHIKIADFGMCKENIWDG  175 (353)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH--EEEcCCCcEEEEeCCcccccccCC
Confidence            468999988888766531       23356788899999999999999999999  999999999999999998633221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+.....  ..+..++.++.++
T Consensus       176 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~~--~~p~~~s~~~~~l  251 (353)
T 2i0e_A          176 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSIMEHNV--AYPKSMSKEAVAI  251 (353)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHHH
T ss_pred             -cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCCC--CCCCCCCHHHHHH
Confidence             13445678999999999999899999999999999999999 9999999988888888876543  4456899999999


Q ss_pred             HHHHhccCCCCCCC-----HHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPK-----FSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps-----~~~il~~l~~  177 (251)
                      +.+||..||++||+     +.++++|.+.
T Consensus       252 i~~lL~~dP~~R~~~~~~~~~~i~~h~~f  280 (353)
T 2i0e_A          252 CKGLMTKHPGKRLGCGPEGERDIKEHAFF  280 (353)
T ss_dssp             HHHHTCSCTTSCTTCSTTHHHHHHTSGGG
T ss_pred             HHHHhhcCHHHcCCCCCCCHHHHhcCccc
Confidence            99999999999995     5888887654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=1.7e-34  Score=237.52  Aligned_cols=179  Identities=27%  Similarity=0.565  Sum_probs=151.7

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+...         ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.....
T Consensus        84 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N--il~~~~~~~kl~Dfg~~~~~~~  161 (279)
T 1qpc_A           84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN--ILVSDTLSCKIADFGLARLIED  161 (279)
T ss_dssp             EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTSCEEECCCTTCEECSS
T ss_pred             EEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhh--EEEcCCCCEEECCCcccccccC
Confidence            357899888888876532         12346778899999999999999999999  9999999999999999988665


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||++.+..++.++||||||+++|+|++.|..||.+....+....+. .+.....+..++.++.
T Consensus       162 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  240 (279)
T 1qpc_A          162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELY  240 (279)
T ss_dssp             SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHHHH
T ss_pred             cccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHh-cccCCCCcccccHHHH
Confidence            554445556678889999999888899999999999999999987899999888777777664 4555666778999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      +++.+||+.||++|||+.++++.|+.+....
T Consensus       241 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          241 QLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence            9999999999999999999999998886553

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.4e-34  Score=246.63  Aligned_cols=178  Identities=26%  Similarity=0.548  Sum_probs=137.1

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~~kl~Dfg~a~~~~~~  200 (373)
T 2qol_A          123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN--ILINSNLVCKVSDFGLGRVLEDD  200 (373)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTCCEEECCC---------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce--EEEcCCCCEEECcCccccccccC
Confidence            4689998888888765432        2245677899999999999999999999  99999999999999999875433


Q ss_pred             cee--ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 CYV--MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ...  ......++..|+|||++.+..++.++||||||+++||+++.|..||.+....++...+. .+.+.+.+..++.++
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l  279 (373)
T 2qol_A          201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVD-EGYRLPPPMDCPAAL  279 (373)
T ss_dssp             -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHH-TTEECCCCTTCBHHH
T ss_pred             CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCccccHHH
Confidence            211  12223456789999999988999999999999999999976999999888877777663 555666677899999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .+++.+||+.||++||++.++++.|..+...
T Consensus       280 ~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          280 YQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999888654

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=1.5e-34  Score=239.84  Aligned_cols=177  Identities=13%  Similarity=0.187  Sum_probs=138.3

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc-----eEEccCCCCcc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS-----SSSGDFGMMRY   68 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~-----~kl~DFGla~~   68 (251)
                      .+||+ .++|.+.+...        ...++.|++.||+|||++||+||||||+|  |+++.++.     +||+|||+++.
T Consensus        84 v~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N--Il~~~~~~~~~~~~kl~Dfg~~~~  160 (298)
T 1csn_A           84 VIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDN--FLIGRPNSKNANMIYVVDFGMVKF  160 (298)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG--EEECCSSSTTTTCEEECCCTTCEE
T ss_pred             EEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH--EEeccCCCCCCCeEEEEECccccc
Confidence            56787 66777655432        22356778899999999999999999999  99977765     99999999987


Q ss_pred             cCCCce------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---hhHHHHHHHhcCCC
Q psy2787          69 SQNDCY------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN---GMQILQKIDREGER  139 (251)
Q Consensus        69 ~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~---~~~~~~~i~~~~~~  139 (251)
                      ......      .......||+.|+|||++.+..++.++||||||+++|+|++ |..||.+..   ..+....+......
T Consensus       161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~  239 (298)
T 1csn_A          161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR-GSLPWQGLKAATNKQKYERIGEKKQS  239 (298)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred             cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHc-CCCCcchhhccccHHHHHHHHhhccC
Confidence            544321      12345678999999999999899999999999999999999 999998743   33333333222211


Q ss_pred             CC---CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         140 LP---RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       140 ~~---~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      .+   ....++.++.+++.+||+.||++|||+.++++.|..+....
T Consensus       240 ~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~  285 (298)
T 1csn_A          240 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  285 (298)
T ss_dssp             SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhc
Confidence            21   23468899999999999999999999999999999886543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5e-34  Score=235.85  Aligned_cols=181  Identities=23%  Similarity=0.492  Sum_probs=151.1

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||.|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--ili~~~~~~kl~Dfg~~~~~~~~  163 (287)
T 1u59_A           86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARN--VLLVNRHYAKISDFGLSKALGAD  163 (287)
T ss_dssp             EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEEEETTEEEECCCTTCEECTTC
T ss_pred             EEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchhe--EEEcCCCCEEECcccceeeeccC
Confidence            3578998888888775332        2345677899999999999999999999  99999999999999999875433


Q ss_pred             ce--eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 CY--VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ..  .......+|+.|+|||++.+..++.++||||||+++|+|+++|..||.+....+....+. .+.+...+..++.++
T Consensus       164 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l  242 (287)
T 1u59_A          164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMECPPECPPEL  242 (287)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH-TTCCCCCCTTCCHHH
T ss_pred             cceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh-cCCcCCCCCCcCHHH
Confidence            22  223344568889999999888899999999999999999976999999888777777664 455666778899999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMK  184 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~~  184 (251)
                      .+++.+||+.||++||++.+++++|+.+..+...
T Consensus       243 ~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~  276 (287)
T 1u59_A          243 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS  276 (287)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence            9999999999999999999999999998876643

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=5e-34  Score=246.77  Aligned_cols=174  Identities=14%  Similarity=0.266  Sum_probs=135.4

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc---CCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS---SSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~---~~~~kl~DFGla~~   68 (251)
                      |.+||++.++|.+++....         ..++.|++.||+|||++||+||||||+|  |+++.   ++.+||+|||+++.
T Consensus       136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N--ill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN--LLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcce--EEEecCCCCccEEEEecccccc
Confidence            4689999999988776532         2346677899999999999999999999  99987   78999999999987


Q ss_pred             cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh----HHHHHHHhcCCCCCCC-
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM----QILQKIDREGERLPRP-  143 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~-  143 (251)
                      .....  ......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+....    .....+.......+.+ 
T Consensus       214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~  290 (400)
T 1nxk_A          214 TTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  290 (400)
T ss_dssp             CC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHH-SSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTT
T ss_pred             cCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHh-CCCCCCCCccccccHHHHHHHHcCcccCCCcc
Confidence            54322  2345678999999999999899999999999999999999 99999765432    2344444444443332 


Q ss_pred             -CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         144 -EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       144 -~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                       ..++.++.+++.+||..||++|||+.++++|.+-..
T Consensus       291 ~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  327 (400)
T 1nxk_A          291 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  327 (400)
T ss_dssp             TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             cccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence             568999999999999999999999999999987543

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=3.8e-34  Score=236.32  Aligned_cols=181  Identities=28%  Similarity=0.543  Sum_probs=152.8

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+.....         .++.+++.||+|||++||+||||||+|  |+++.++.+||+|||++.....
T Consensus        86 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~N--il~~~~~~~~l~Dfg~~~~~~~  163 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN--CLVGENHLVKVADFGLSRLMTG  163 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGG--EEECGGGCEEECCCCGGGTSCS
T ss_pred             EEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcce--EEEcCCCCEEEccCccceeccC
Confidence            35789888888887654222         234677899999999999999999999  9999999999999999988665


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........++..|+|||++.+..++.++||||+|+++|+|+++|..||.+.+..+....+ ........+..++.++.
T Consensus       164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~  242 (288)
T 3kfa_A          164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-EKDYRMERPEGCPEKVY  242 (288)
T ss_dssp             SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH-HTTCCCCCCTTCCHHHH
T ss_pred             CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-hccCCCCCCCCCCHHHH
Confidence            55445556677888999999998899999999999999999998788999988877776666 35556667788999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMK  184 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~~  184 (251)
                      +++.+||..||++|||+.++++.|..+......
T Consensus       243 ~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~  275 (288)
T 3kfa_A          243 ELMRACWQWNPSDRPSFAEIHQAFETMFQESSI  275 (288)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhCCChhhCcCHHHHHHHHHHHHHhccc
Confidence            999999999999999999999999988766543

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=9.4e-35  Score=243.99  Aligned_cols=178  Identities=28%  Similarity=0.520  Sum_probs=139.7

Q ss_pred             cccccchhHHHHHhcCC-------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           2 SANFAELNAFQENYTEP-------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .+||++.++|.+.+...             ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.
T Consensus       109 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~N--Ili~~~~~~kl~Dfg~a~~  186 (323)
T 3qup_A          109 ILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARN--CMLAEDMTVCVADFGLSRK  186 (323)
T ss_dssp             EEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECTTSCEEECCCCC---
T ss_pred             EEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcce--EEEcCCCCEEEeecccccc
Confidence            47888888887755321             22346678899999999999999999999  9999999999999999987


Q ss_pred             cCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCc
Q psy2787          69 SQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        69 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ...... .......+++.|+|||++.+..++.++|||||||++|+|++.|..||.+....+....+. .+.....+..++
T Consensus       187 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  265 (323)
T 3qup_A          187 IYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI-GGNRLKQPPECM  265 (323)
T ss_dssp             --------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTCC
T ss_pred             ccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHh-cCCCCCCCCccC
Confidence            543322 223344567789999999998999999999999999999997899999988877777764 455566677899


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      .++.+++.+||+.||++|||+.++++.|+.+....
T Consensus       266 ~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~  300 (323)
T 3qup_A          266 EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL  300 (323)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            99999999999999999999999999999886544

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=2.4e-34  Score=242.78  Aligned_cols=179  Identities=27%  Similarity=0.548  Sum_probs=149.4

Q ss_pred             CcccccchhHHHHHhcCCCC-----------------------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPCR-----------------------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~-----------------------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+++.....                       .++.|++.||+|||++||+||||||+|  |+++.++.
T Consensus       118 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~  195 (334)
T 2pvf_A          118 VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN--VLVTENNV  195 (334)
T ss_dssp             EEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCC
T ss_pred             EEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccce--EEEcCCCC
Confidence            36789988888887654321                       235578899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+++....... .......+++.|+|||++.+..++.++||||||+++|+|+++|..||.+....++...+. .
T Consensus       196 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~  274 (334)
T 2pvf_A          196 MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK-E  274 (334)
T ss_dssp             EEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-H
T ss_pred             EEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHh-c
Confidence            99999999987554332 233445667889999999888899999999999999999987899999988777776664 4


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      +.....+..++.++.+++.+||+.||.+|||+.+++++|..+....
T Consensus       275 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~  320 (334)
T 2pvf_A          275 GHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLT  320 (334)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            4556667789999999999999999999999999999999886543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=6.4e-35  Score=254.63  Aligned_cols=174  Identities=16%  Similarity=0.171  Sum_probs=145.6

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |++||++.|+|.+.+....        ..++.|++.||+|||+++|+||||||+|  ||++.++.+||+|||+|+.....
T Consensus       151 lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~N--ILl~~~g~vkL~DFGla~~~~~~  228 (437)
T 4aw2_A          151 LVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDN--ILMDMNGHIRLADFGSCLKLMED  228 (437)
T ss_dssp             EEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHH--eeEcCCCCEEEcchhhhhhcccC
Confidence            4689999999998876522        2246678899999999999999999999  99999999999999999876555


Q ss_pred             ceeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC---C
Q psy2787          73 CYVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP---E  144 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~---~  144 (251)
                      .........||+.|+|||++.     ...++.++||||+||++|||++ |..||.+.+..+....+.........|   .
T Consensus       229 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~  307 (437)
T 4aw2_A          229 GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLY-GETPFYAESLVETYGKIMNHKERFQFPTQVT  307 (437)
T ss_dssp             SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTHHHHCCCCSSCC
T ss_pred             CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHh-CCCCCCCCChhHHHHhhhhccccccCCcccc
Confidence            444555678999999999987     4568999999999999999999 999999988888888775433222222   4


Q ss_pred             CCcHHHHHHHHHHhccCCCC--CCCHHHHHHHHHh
Q psy2787         145 ACPVEVYALMRQCWSKNPAE--RPKFSTLKDCLYR  177 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~--Rps~~~il~~l~~  177 (251)
                      .+++++.+++.+||..+|++  |++++++++|.+-
T Consensus       308 ~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff  342 (437)
T 4aw2_A          308 DVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFF  342 (437)
T ss_dssp             CSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGG
T ss_pred             cCCHHHHHHHHHHhcccccccCCCCHHHHhCCCcc
Confidence            58999999999999888888  9999999998764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=3.3e-34  Score=237.40  Aligned_cols=183  Identities=25%  Similarity=0.532  Sum_probs=150.3

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+....       ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        94 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~N--il~~~~~~~kl~Dfg~~~~~~~~~  171 (291)
T 1xbb_A           94 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN--VLLVTQHYAKISDFGLSKALRADE  171 (291)
T ss_dssp             EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEEETTEEEECCCTTCEECCTTC
T ss_pred             EEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcce--EEEeCCCcEEEccCCcceeeccCC
Confidence            3578888888887665421       2356678899999999999999999999  999999999999999998754332


Q ss_pred             e--eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          74 Y--VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        74 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .  .......++..|+|||++.+..++.++||||||+++|+|++.|..||.+....++...+. .+.....+..++.++.
T Consensus       172 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  250 (291)
T 1xbb_A          172 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREMY  250 (291)
T ss_dssp             SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHHHH
T ss_pred             CcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHH
Confidence            2  222334567889999999888889999999999999999987999999988777776664 5556667788999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHHHHHhh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKAT  186 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~~~~  186 (251)
                      +++.+||+.||++|||+.++++.|..+........
T Consensus       251 ~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~  285 (291)
T 1xbb_A          251 DLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG  285 (291)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence            99999999999999999999999999987766544

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-34  Score=243.17  Aligned_cols=173  Identities=16%  Similarity=0.179  Sum_probs=145.3

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc--CCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS--SSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~--~~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.  ++.+||+|||+++...
T Consensus        78 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~N--Il~~~~~~~~~kl~Dfg~a~~~~  155 (321)
T 1tki_A           78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN--IIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEESSSSCCCEEECCCTTCEECC
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHH--EEEccCCCCCEEEEECCCCeECC
Confidence            4689999999998876532        2345678899999999999999999999  88887  7899999999998765


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~  148 (251)
                      ....  .....+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.+.+..+....+.......+.  ...++.
T Consensus       156 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  232 (321)
T 1tki_A          156 PGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQIIENIMNAEYTFDEEAFKEISI  232 (321)
T ss_dssp             TTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCH
T ss_pred             CCCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHh-CCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCH
Confidence            4322  223467889999999998888999999999999999999 99999998888888887665544432  246899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.+++.+||..||++|||+.++++|.+-.
T Consensus       233 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~  262 (321)
T 1tki_A          233 EAMDFVDRLLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence            999999999999999999999999988754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=4.4e-34  Score=239.96  Aligned_cols=169  Identities=18%  Similarity=0.237  Sum_probs=145.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++..... 
T Consensus        83 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~g~~kL~Dfg~a~~~~~~-  159 (318)
T 1fot_A           83 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPEN--ILLDKNGHIKITDFGFAKYVPDV-  159 (318)
T ss_dssp             EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG--EEECTTSCEEECCCSSCEECSSC-
T ss_pred             EEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhe--EEEcCCCCEEEeecCcceecCCc-
Confidence            468999988888876532       12346688899999999999999999999  99999999999999999875443 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         .....||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..+....+....  ...+..++.++.++
T Consensus       160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~l  233 (318)
T 1fot_A          160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFYDSNTMKTYEKILNAE--LRFPPFFNEDVKDL  233 (318)
T ss_dssp             ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHH
T ss_pred             ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHH
Confidence               345678999999999999899999999999999999999 999999988888888876654  34456789999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~~  178 (251)
                      +.+||..||++||     +++++++|.+-.
T Consensus       234 i~~lL~~dp~~R~~~~~~~~~~i~~hp~f~  263 (318)
T 1fot_A          234 LSRLITRDLSQRLGNLQNGTEDVKNHPWFK  263 (318)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHTSGGGS
T ss_pred             HHHHhccCHHHcCCCcCCCHHHHhcCcccc
Confidence            9999999999999     899999987654

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=3.2e-34  Score=244.88  Aligned_cols=172  Identities=15%  Similarity=0.222  Sum_probs=143.6

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC---CceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS---SSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~---~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+....       ..++.|++.||+|||++||+||||||+|  |+++.+   +.+||+|||++....
T Consensus       105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~N--Ill~~~~~~~~~kl~DfG~a~~~~  182 (362)
T 2bdw_A          105 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPEN--LLLASKAKGAAVKLADFGLAIEVN  182 (362)
T ss_dssp             EEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGG--EEESCSSTTCCEEECCCTTCBCCT
T ss_pred             EEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHH--EEEecCCCCCCEEEeecCcceEec
Confidence            4689999999988765432       2346688899999999999999999999  888765   459999999998755


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      ...  ......||+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..++...+.......+.+  ..++.
T Consensus       183 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  259 (362)
T 2bdw_A          183 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV-GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP  259 (362)
T ss_dssp             TCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCH
T ss_pred             CCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCH
Confidence            432  2344678999999999999899999999999999999999 999999988888888776655544433  46889


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+++.+||..||++|||+.++++|.+-
T Consensus       260 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~  288 (362)
T 2bdw_A          260 EAKSLIDSMLTVNPKKRITADQALKVPWI  288 (362)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTSHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence            99999999999999999999999988654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=1.1e-33  Score=233.54  Aligned_cols=171  Identities=22%  Similarity=0.419  Sum_probs=140.7

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCC--cccCCCCCCCceEEEccCCc-----eEEccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFFSSSS-----SSSGDFGM   65 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~~~~~-----~kl~DFGl   65 (251)
                      +.+||++.++|.+.+.....        .++.|++.||+|||+++  |+||||||+|  |+++.++.     +||+|||+
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~N--il~~~~~~~~~~~~kl~Dfg~  175 (287)
T 4f0f_A           98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPN--IFLQSLDENAPVCAKVADFGL  175 (287)
T ss_dssp             EEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGG--EEESCCCTTCSCCEEECCCTT
T ss_pred             EEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcce--EEEeccCCCCceeEEeCCCCc
Confidence            36899999999887654332        34667789999999999  9999999999  99987776     99999999


Q ss_pred             CcccCCCceeecCCCCcCcccCCCcccC--CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH--HHHHHHhcCCCCC
Q psy2787          66 MRYSQNDCYVMTERKPLPCPWCPMESLK--HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ--ILQKIDREGERLP  141 (251)
Q Consensus        66 a~~~~~~~~~~~~~~~~~~~y~aPE~~~--~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~--~~~~i~~~~~~~~  141 (251)
                      ++.....    .....+|+.|+|||++.  ...++.++||||+|+++|+|++ |..||.+.....  ....+...+..+.
T Consensus       176 ~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  250 (287)
T 4f0f_A          176 SQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILT-GEGPFDEYSYGKIKFINMIREEGLRPT  250 (287)
T ss_dssp             CBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHH-SSCTTTTCCCCHHHHHHHHHHSCCCCC
T ss_pred             ccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHc-CCCCCccccccHHHHHHHHhccCCCCC
Confidence            9864432    23456788999999984  4457899999999999999999 999998765433  3455556677777


Q ss_pred             CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         142 RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+..+++++.+++.+||+.||++|||+.++++.|+.+
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            7888999999999999999999999999999998763

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=5.4e-35  Score=248.05  Aligned_cols=171  Identities=16%  Similarity=0.202  Sum_probs=144.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~g~vkL~DFG~a~~~~~~~  172 (345)
T 1xjd_A           95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN--ILLDKDGHIKIADFGMCKENMLGD  172 (345)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhh--EEECCCCCEEEeEChhhhhcccCC
Confidence            468999999888766431       23456788899999999999999999999  999999999999999998633221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+....  ...+..++.++.++
T Consensus       173 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~l  248 (345)
T 1xjd_A          173 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI-GQSPFHGQDEEELFHSIRMDN--PFYPRWLEKEAKDL  248 (345)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHH
T ss_pred             -CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhc-CCCCCCCCCHHHHHHHHHhCC--CCCCcccCHHHHHH
Confidence             12455678999999999999899999999999999999999 999999988888888886553  34456789999999


Q ss_pred             HHHHhccCCCCCCCHH-HHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFS-TLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~-~il~~l~~  177 (251)
                      +.+||..||++||++. ++++|.+-
T Consensus       249 i~~lL~~dp~~R~~~~~~i~~hp~f  273 (345)
T 1xjd_A          249 LVKLFVREPEKRLGVRGDIRQHPLF  273 (345)
T ss_dssp             HHHHSCSSGGGSBTTBSCGGGSGGG
T ss_pred             HHHHhcCCHhHcCCChHHHHcCccc
Confidence            9999999999999998 88877653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=3.8e-34  Score=233.75  Aligned_cols=176  Identities=24%  Similarity=0.501  Sum_probs=147.6

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.+....        ...+.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N--ili~~~~~~kl~dfg~~~~~~~~~  158 (267)
T 3t9t_A           81 VTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN--CLVGENQVIKVSDFGMTRFVLDDQ  158 (267)
T ss_dssp             EECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGG--EEECGGGCEEECCTTGGGGBCCHH
T ss_pred             EEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchhe--EEECCCCCEEEccccccccccccc
Confidence            578888888877664322        2345677899999999999999999999  999999999999999998765443


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      ........++..|+|||++.+..++.++||||+|+++|+|++.|..||.+....+....+. .+.....+..++..+.++
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~l  237 (267)
T 3t9t_A          159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQI  237 (267)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTSCHHHHHH
T ss_pred             ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHh-cCCcCCCCccCcHHHHHH
Confidence            3344456677889999999988899999999999999999986799999888777777764 445555667789999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +.+||+.||++|||+.+++++|..+..
T Consensus       238 i~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (267)
T 3t9t_A          238 MNHCWRERPEDRPAFSRLLRQLAEIAE  264 (267)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            999999999999999999999988754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=1.3e-34  Score=240.11  Aligned_cols=178  Identities=25%  Similarity=0.499  Sum_probs=138.5

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N--il~~~~~~~kl~Dfg~~~~~~~~  167 (295)
T 3ugc_A           90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN--ILVENENRVKIGDFGLTKVLPQD  167 (295)
T ss_dssp             EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEEEETTEEEECCCCSCC-----
T ss_pred             EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhh--EEEcCCCeEEEccCcccccccCC
Confidence            3678998888887664322        2346688899999999999999999999  99999999999999999875433


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh----------------HHHHHHH
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM----------------QILQKID  134 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~----------------~~~~~i~  134 (251)
                      .  ........++..|+|||++.+..++.++||||||+++|+|++ |..||......                .....+ 
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  245 (295)
T 3ugc_A          168 KEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELL-  245 (295)
T ss_dssp             --------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHH-TTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHH-
T ss_pred             cceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHh-cccccCCChHHHHhhhcCccccchhHHHHHHHH-
Confidence            2  122334557778999999999899999999999999999999 99988643211                122222 


Q ss_pred             hcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         135 REGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ..+.+.+.+..++.++.+++.+||+.||++|||+.++++.|..+....
T Consensus       246 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          246 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             hccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            355566777889999999999999999999999999999999886543

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=1.7e-34  Score=242.14  Aligned_cols=182  Identities=26%  Similarity=0.490  Sum_probs=148.7

Q ss_pred             CcccccchhHHHHHhcCC-----------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccC
Q psy2787           1 MSANFAELNAFQENYTEP-----------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDF   63 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DF   63 (251)
                      +.+||++.++|.+.+...                 ...++.|++.||+|||++||+||||||+|  |+++.++.+||+||
T Consensus       105 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~N--Ili~~~~~~kl~Df  182 (322)
T 1p4o_A          105 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN--CMVAEDFTVKIGDF  182 (322)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGG--EEECTTCCEEECCT
T ss_pred             EEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccce--EEEcCCCeEEECcC
Confidence            357888887777755421                 12346688899999999999999999999  99999999999999


Q ss_pred             CCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC
Q psy2787          64 GMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR  142 (251)
Q Consensus        64 Gla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~  142 (251)
                      |+++...... ........+|+.|+|||++.+..++.++||||+|+++|+|+++|..||.+....+....+. .+.....
T Consensus       183 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~  261 (322)
T 1p4o_A          183 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM-EGGLLDK  261 (322)
T ss_dssp             TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH-TTCCCCC
T ss_pred             ccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH-cCCcCCC
Confidence            9998754332 2233445668889999999988899999999999999999997789999888777777764 4445556


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHHHh
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMKA  185 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~~~  185 (251)
                      +..++..+.+++.+||+.||++|||+.+++++|..........
T Consensus       262 ~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~  304 (322)
T 1p4o_A          262 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  304 (322)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcc
Confidence            6789999999999999999999999999999999876654433

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=2.5e-34  Score=238.04  Aligned_cols=179  Identities=14%  Similarity=0.152  Sum_probs=138.4

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEE---ccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILF---FSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~---~~~~~~kl~DFGla~~~   69 (251)
                      +.+||+ .++|.+.+...        ...++.|++.||+|||++||+||||||+|  |++   +.++.+||+|||+++..
T Consensus        82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N--Il~~~~~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A           82 MVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDN--FLMGLGKKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             EEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--eeeeccCCCCeEEEecCccceec
Confidence            357787 66666655421        22346678899999999999999999999  999   78899999999999875


Q ss_pred             CCCce------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh---HHHHHHHhcCCCC
Q psy2787          70 QNDCY------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM---QILQKIDREGERL  140 (251)
Q Consensus        70 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~---~~~~~i~~~~~~~  140 (251)
                      .....      .......+|..|+|||++.+..++.++|||||||++|+|++ |..||.+....   +....+.......
T Consensus       159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  237 (296)
T 4hgt_A          159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL-GSLPWQGLKAATKRQKYERISEKKMST  237 (296)
T ss_dssp             BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCCSSSSSHHHHHHHHHHHS
T ss_pred             cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhc-CCCCCcccchhhhhhhhhhhhcccccc
Confidence            44321      22345678999999999999999999999999999999999 99999764321   2222222221111


Q ss_pred             C---CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         141 P---RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       141 ~---~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      +   ....++.++.+++.+||+.||++|||+.++++.|..+.....
T Consensus       238 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          238 PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence            1   125678999999999999999999999999999998876653

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.6e-34  Score=245.61  Aligned_cols=169  Identities=16%  Similarity=0.178  Sum_probs=145.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++..... 
T Consensus       118 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~g~~kL~DFg~a~~~~~~-  194 (350)
T 1rdq_E          118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN--LLIDQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECSSC-
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccce--EEECCCCCEEEcccccceeccCC-
Confidence            468999888888766432       23356788899999999999999999999  99999999999999999876543 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         .....||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+....  ...+..++.++.++
T Consensus       195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~l  268 (350)
T 1rdq_E          195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDL  268 (350)
T ss_dssp             ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCC--CCCCTTCCHHHHHH
T ss_pred             ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhh-CCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHHH
Confidence               245678999999999999899999999999999999999 999999988888888886653  34566899999999


Q ss_pred             HHHHhccCCCCCCC-----HHHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERPK-----FSTLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rps-----~~~il~~l~~~  178 (251)
                      +.+||..||++||+     +.++++|.+..
T Consensus       269 i~~lL~~dp~~R~~~~~~~~~ei~~h~~f~  298 (350)
T 1rdq_E          269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWFA  298 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHTSGGGT
T ss_pred             HHHHhhcCHHhccCCccCCHHHHHhCcCcC
Confidence            99999999999998     89999887653

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-33  Score=238.51  Aligned_cols=179  Identities=30%  Similarity=0.568  Sum_probs=142.0

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N--Il~~~~~~~kl~Dfg~~~~~~~~  200 (333)
T 1mqb_A          123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARN--ILVNSNLVCKVSDFGLSRVLEDD  200 (333)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTCCEEECCCCC-------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhe--EEECCCCcEEECCCCcchhhccc
Confidence            4688998888887665321        2345677899999999999999999999  99999999999999999875433


Q ss_pred             ce--eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 CY--VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ..  .......+|..|+|||++.+..++.++||||||+++|||+++|..||.+....++...+. .+.+.+.+..++.++
T Consensus       201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  279 (333)
T 1mqb_A          201 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTPMDCPSAI  279 (333)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTCBHHH
T ss_pred             cccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH-CCCcCCCcccCCHHH
Confidence            21  122234457789999999988899999999999999999987999999888877777764 555666777899999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      .+++.+||+.||++||++.++++.|+.+....
T Consensus       280 ~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  311 (333)
T 1mqb_A          280 YQLMMQCWQQERARRPKFADIVSILDKLIRAP  311 (333)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            99999999999999999999999998876543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=2.8e-34  Score=237.35  Aligned_cols=179  Identities=42%  Similarity=0.864  Sum_probs=146.8

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.+...        ...++.|++.||.|||+++|+||||||+|  |+++.++.+||+|||++.......
T Consensus        98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~N--ili~~~~~~kl~Dfg~~~~~~~~~  175 (291)
T 1u46_A           98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN--LLLATRDLVKIGDFGLMRALPQND  175 (291)
T ss_dssp             EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEEEETTEEEECCCTTCEECCC-C
T ss_pred             eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchhe--EEEcCCCCEEEccccccccccccc
Confidence            57888888887755421        23356688899999999999999999999  999999999999999998754332


Q ss_pred             --eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          74 --YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        74 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                        ........+|..|+|||++.+..++.++||||||+++|+|+++|..||.+.+..+....+.......+.+..++.++.
T Consensus       176 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  255 (291)
T 1u46_A          176 DHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY  255 (291)
T ss_dssp             CEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHH
T ss_pred             cchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHH
Confidence              223344567788999999988888999999999999999998789999998888888887767777777788999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      +++.+||+.||++|||+.++++.|..+.+..
T Consensus       256 ~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          256 NVMVQCWAHKPEDRPTFVALRDFLLEAQPTD  286 (291)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             HHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence            9999999999999999999999998877543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=2.7e-34  Score=240.20  Aligned_cols=178  Identities=26%  Similarity=0.502  Sum_probs=140.0

Q ss_pred             cccccchhHHHHHhcCC-------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787           2 SANFAELNAFQENYTEP-------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .+||++.++|.+.+...             ...++.|++.||.|||++||+||||||+|  |+++.++.+||+|||+++.
T Consensus       119 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~N--Ili~~~~~~kl~Dfg~~~~  196 (313)
T 3brb_A          119 ILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN--CMLRDDMTVCVADFGLSKK  196 (313)
T ss_dssp             EEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGG--EEECTTSCEEECSCSCC--
T ss_pred             EEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcce--EEEcCCCcEEEeecCccee
Confidence            56888877877765211             12245677899999999999999999999  9999999999999999987


Q ss_pred             cCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCc
Q psy2787          69 SQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        69 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ...... .......+++.|+|||++.+..++.++||||||+++|+|++.|..||.+....+....+. .+.....+..++
T Consensus       197 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~  275 (313)
T 3brb_A          197 IYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL-HGHRLKQPEDCL  275 (313)
T ss_dssp             --------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCCCCCBTTCC
T ss_pred             cccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH-cCCCCCCCcccc
Confidence            543322 223345667889999999998899999999999999999997788999888777776664 455666677899


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      .++.+++.+||+.||++|||+.+++++|..+....
T Consensus       276 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          276 DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999886543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.8e-34  Score=246.43  Aligned_cols=172  Identities=15%  Similarity=0.167  Sum_probs=133.7

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc-
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC-   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~-   73 (251)
                      |.+||++ ++|.......      ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+|+...... 
T Consensus        88 lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~N--Ill~~~~~~kl~DFG~a~~~~~~~~  164 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSN--ILLNAECHVKVADFGLSRSFVNIRR  164 (388)
T ss_dssp             EEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCTTCEESSSCCC
T ss_pred             EEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHH--eEEcCCCCEEecCCccccccccccc
Confidence            3578887 5676655432      12346688999999999999999999999  999999999999999998643211 


Q ss_pred             -------------------eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy2787          74 -------------------YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKI  133 (251)
Q Consensus        74 -------------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i  133 (251)
                                         ........||+.|+|||++.+ ..++.++||||+||++|||++ |..||.+.+..+....+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i  243 (388)
T 3oz6_A          165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILC-GKPIFPGSSTMNQLERI  243 (388)
T ss_dssp             CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHH
T ss_pred             ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHH
Confidence                               112234578999999999876 578999999999999999999 99999998877666555


Q ss_pred             HhcCCCCC---------------------------------------------CCCCCcHHHHHHHHHHhccCCCCCCCH
Q psy2787         134 DREGERLP---------------------------------------------RPEACPVEVYALMRQCWSKNPAERPKF  168 (251)
Q Consensus       134 ~~~~~~~~---------------------------------------------~~~~~~~~~~~li~~cl~~dP~~Rps~  168 (251)
                      ......+.                                             .+..+++++.+|+.+||..||++|||+
T Consensus       244 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~  323 (388)
T 3oz6_A          244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISA  323 (388)
T ss_dssp             HHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred             HHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCH
Confidence            32111100                                             112678899999999999999999999


Q ss_pred             HHHHHHHH
Q psy2787         169 STLKDCLY  176 (251)
Q Consensus       169 ~~il~~l~  176 (251)
                      .++++|.+
T Consensus       324 ~e~l~Hp~  331 (388)
T 3oz6_A          324 NDALKHPF  331 (388)
T ss_dssp             HHHTTSTT
T ss_pred             HHHhCCHH
Confidence            99999865

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=5e-34  Score=260.57  Aligned_cols=178  Identities=28%  Similarity=0.622  Sum_probs=146.6

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~N--ILl~~~~~vkL~DFG~a~~~~~~  544 (656)
T 2j0j_A          467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN--VLVSSNDCVKLGDFGLSRYMEDS  544 (656)
T ss_dssp             EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEEEETTEEEECCCCCCCSCCC-
T ss_pred             EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHh--EEEeCCCCEEEEecCCCeecCCC
Confidence            4689999999988765332        1345678899999999999999999999  99999999999999999876554


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........+|+.|+|||++.+..++.++||||||+++|||++.|..||.+....+....+. .+.+.+.+..++..+.+
T Consensus       545 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~  623 (656)
T 2j0j_A          545 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYS  623 (656)
T ss_dssp             ---------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-HTCCCCCCTTCCHHHHH
T ss_pred             cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-cCCCCCCCccccHHHHH
Confidence            44344455677889999999988999999999999999999965999999988888777774 45566677889999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ++.+||+.||++|||+.++++.|..+...
T Consensus       624 li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          624 LMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999987654

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=2.7e-34  Score=238.54  Aligned_cols=175  Identities=17%  Similarity=0.323  Sum_probs=135.6

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhh--------hCCcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFS--------VNNICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH--------~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      +.+||++.++|.+.+...      ...++.|++.||+|||        +++|+||||||+|  |+++.++.+||+|||++
T Consensus        83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~N--ill~~~~~~kl~Dfg~a  160 (301)
T 3q4u_A           83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKN--ILVKKNGQCCIADLGLA  160 (301)
T ss_dssp             EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGG--EEECTTSCEEECCCTTC
T ss_pred             EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHh--EEEcCCCCEEEeeCCCe
Confidence            368999999999877532      1235667889999999        9999999999999  99999999999999999


Q ss_pred             cccCCCcee---ecCCCCcCcccCCCcccCCC------CCCchhHHHHHHHHHHHHHhCC----------CCCCCCCC--
Q psy2787          67 RYSQNDCYV---MTERKPLPCPWCPMESLKHN------QFSQASDAWMFGVTIWEMFTFG----------AEPWVGLN--  125 (251)
Q Consensus        67 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~------~~~~~~Di~S~G~il~el~~~g----------~~pf~~~~--  125 (251)
                      +........   ......||+.|+|||++.+.      .++.++|||||||++|||++ |          ..||.+..  
T Consensus       161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~t-g~~~~~~~~~~~~pf~~~~~~  239 (301)
T 3q4u_A          161 VMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVAR-RMVSNGIVEDYKPPFYDVVPN  239 (301)
T ss_dssp             EEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT-TBCBTTBCCCCCCTTTTTSCS
T ss_pred             eecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHh-hhcCccccccccccccccCCC
Confidence            874433222   23345789999999999876      34579999999999999999 8          88885532  


Q ss_pred             ---hhHHHHHHHhcCCCCCCC-----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         126 ---GMQILQKIDREGERLPRP-----EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       126 ---~~~~~~~i~~~~~~~~~~-----~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                         .......+......+..+     ..++.++.+++.+||+.||++|||+.++++.|+.+
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          240 DPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             CcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence               122333333333333333     22567899999999999999999999999999876

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=5.7e-34  Score=239.97  Aligned_cols=174  Identities=13%  Similarity=0.154  Sum_probs=144.0

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC----ceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS----SSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~----~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+.+....       ..++.|++.||+|||++||+||||||+|  |+++.++    .+||+|||+++..
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~N--Ill~~~~~~~~~~kl~Dfg~a~~~  168 (326)
T 2y0a_A           91 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN--IMLLDRNVPKPRIKIIDFGLAHKI  168 (326)
T ss_dssp             EEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHH--EEEecCCCCCCCEEEEECCCCeEC
Confidence            4689999899988765421       2346678899999999999999999999  9998877    7999999999875


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCc
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACP  147 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~  147 (251)
                      ....  ......+|+.|+|||++.+..++.++||||+||++|+|++ |..||.+....+....+.......+.  ...++
T Consensus       169 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (326)
T 2y0a_A          169 DFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANVSAVNYEFEDEYFSNTS  245 (326)
T ss_dssp             CTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSC
T ss_pred             CCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHH-CcCCCCCCCHHHHHHHHHhcCCCcCccccccCC
Confidence            4332  2334578999999999998899999999999999999999 99999988877777776554433322  25688


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ..+.+++.+||..||++|||+.++++|.+-..
T Consensus       246 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  277 (326)
T 2y0a_A          246 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKP  277 (326)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcCCCccC
Confidence            99999999999999999999999999876543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=3.1e-34  Score=251.36  Aligned_cols=172  Identities=16%  Similarity=0.198  Sum_probs=143.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +++||++.++|...+...       ...++.|++.||+|||+ +||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       225 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~N--Ill~~~~~~kl~DFG~a~~~~~~  302 (446)
T 4ejn_A          225 FVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLEN--LMLDKDGHIKITDFGLCKEGIKD  302 (446)
T ss_dssp             EEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGG--EEECSSSCEEECCCCCCCTTCC-
T ss_pred             EEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHH--EEECCCCCEEEccCCCceeccCC
Confidence            468999988887765432       22356788899999998 999999999999  99999999999999999864332


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      . .......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..++...+.....  ..+..+++++.+
T Consensus       303 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~~  378 (446)
T 4ejn_A          303 G-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHEKLFELILMEEI--RFPRTLGPEAKS  378 (446)
T ss_dssp             -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCC--CCCTTSCHHHHH
T ss_pred             C-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhh-CCCCCCCCCHHHHHHHHHhCCC--CCCccCCHHHHH
Confidence            2 12345678999999999999999999999999999999999 9999999888888887765543  345678999999


Q ss_pred             HHHHHhccCCCCCC-----CHHHHHHHHHhh
Q psy2787         153 LMRQCWSKNPAERP-----KFSTLKDCLYRL  178 (251)
Q Consensus       153 li~~cl~~dP~~Rp-----s~~~il~~l~~~  178 (251)
                      ++.+||+.||++||     ++.++++|.+.-
T Consensus       379 li~~~L~~dP~~R~~~~~~t~~ell~hp~f~  409 (446)
T 4ejn_A          379 LLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA  409 (446)
T ss_dssp             HHHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred             HHHHHcccCHHHhCCCCCCCHHHHHhCcccc
Confidence            99999999999999     999999987654

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=3.4e-34  Score=241.15  Aligned_cols=176  Identities=28%  Similarity=0.576  Sum_probs=144.5

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.++|.+.+....                       ..++.|++.||+|||++||+||||||+|  |+++.++.
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N--Il~~~~~~  180 (327)
T 1fvr_A          103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN--ILVGENYV  180 (327)
T ss_dssp             EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECGGGC
T ss_pred             EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccce--EEEcCCCe
Confidence            3678998888888765432                       2346677899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC
Q psy2787          58 SSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG  137 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~  137 (251)
                      +||+|||+++....  ........++..|+|||++.+..++.++||||||+++|+|+++|..||.+....++...+. .+
T Consensus       181 ~kL~Dfg~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~-~~  257 (327)
T 1fvr_A          181 AKIADFGLSRGQEV--YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QG  257 (327)
T ss_dssp             EEECCTTCEESSCE--ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG-GT
T ss_pred             EEEcccCcCccccc--cccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhh-cC
Confidence            99999999874321  1122344567789999999888889999999999999999976999999988877777764 45


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .....+..++.++.+++.+||+.||++|||+.+++++|..+...
T Consensus       258 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          258 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            55666778999999999999999999999999999999887654

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=7.6e-34  Score=243.35  Aligned_cols=170  Identities=16%  Similarity=0.206  Sum_probs=141.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus       116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N--Ill~~~g~ikL~DFG~a~~~~~~~  193 (373)
T 2r5t_A          116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPEN--ILLDSQGHIVLTDFGLCKENIEHN  193 (373)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTSCEEECCCCBCGGGBCCC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH--EEECCCCCEEEeeCccccccccCC
Confidence            468999998888765432       22356788899999999999999999999  999999999999999998633221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++|+|||||++|||++ |..||.+.+..++...+....  ...+..++.++.++
T Consensus       194 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-G~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~l  269 (373)
T 2r5t_A          194 -STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLY-GLPPFYSRNTAEMYDNILNKP--LQLKPNITNSARHL  269 (373)
T ss_dssp             -CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCCSBHHHHHHHHHHSC--CCCCSSSCHHHHHH
T ss_pred             -CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHhcc--cCCCCCCCHHHHHH
Confidence             13445678999999999999999999999999999999999 999999998888888886653  34456789999999


Q ss_pred             HHHHhccCCCCCCCHH----HHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFS----TLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~----~il~~l~  176 (251)
                      +.+||..||.+||++.    ++++|.+
T Consensus       270 i~~lL~~dp~~R~~~~~~~~~i~~h~~  296 (373)
T 2r5t_A          270 LEGLLQKDRTKRLGAKDDFMEIKSHVF  296 (373)
T ss_dssp             HHHHTCSSGGGSTTTTTTHHHHHTSGG
T ss_pred             HHHHcccCHHhCCCCCCCHHHHhCCcc
Confidence            9999999999999974    5555543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-33  Score=231.87  Aligned_cols=178  Identities=28%  Similarity=0.549  Sum_probs=145.1

Q ss_pred             cccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+..++|.+.+.....        .++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus       101 v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~N--ili~~~~~~kl~Dfg~~~~~~~~~  178 (298)
T 3pls_A          101 LLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARN--CMLDESFTVKVADFGLARDILDRE  178 (298)
T ss_dssp             EECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECTTCCEEECCTTSSCTTTTGG
T ss_pred             EEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcce--EEEcCCCcEEeCcCCCcccccCCc
Confidence            5788888888887764322        334577899999999999999999999  999999999999999998654332


Q ss_pred             e---eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          74 Y---VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        74 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .   .......++..|+|||.+.+..++.++||||+|+++|+|+++|.+||.+.+..+....+ ..+...+.+..++..+
T Consensus       179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l  257 (298)
T 3pls_A          179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFL-AQGRRLPQPEYCPDSL  257 (298)
T ss_dssp             GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHH-HTTCCCCCCTTCCHHH
T ss_pred             ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHh-hcCCCCCCCccchHHH
Confidence            1   12334567889999999999899999999999999999999445556666666666655 4555666777899999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      .+++.+||+.||++|||+.++++.|..+....
T Consensus       258 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          258 YQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence            99999999999999999999999998886653

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=4.7e-34  Score=236.59  Aligned_cols=177  Identities=14%  Similarity=0.151  Sum_probs=137.0

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEE---ccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILF---FSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~---~~~~~~kl~DFGla~~~~   70 (251)
                      .+||+ .++|.+.+...        ...++.|++.||+|||++||+||||||+|  |++   +.++.+||+|||+++...
T Consensus        83 v~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N--Il~~~~~~~~~~kl~Dfg~~~~~~  159 (296)
T 3uzp_A           83 VMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDN--FLMGLGKKGNLVYIIDFGLAKKYR  159 (296)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEECCGGGTTCEEECCCTTCEECB
T ss_pred             EEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH--eEEecCCCCCeEEEeeCCCccccc
Confidence            57887 56666655421        12346678899999999999999999999  988   588899999999998754


Q ss_pred             CCce------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh---hHHHHHHHhcCCCCC
Q psy2787          71 NDCY------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG---MQILQKIDREGERLP  141 (251)
Q Consensus        71 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~---~~~~~~i~~~~~~~~  141 (251)
                      ....      .......+|..|+|||++.+..++.++||||||+++|+|++ |..||.+...   .+....+.......+
T Consensus       160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~  238 (296)
T 3uzp_A          160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL-GSLPWQGLKAATKRQKYERISEKKMSTP  238 (296)
T ss_dssp             CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred             ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHh-CCCCCCCcCchhhhhhhhhhcccccCCc
Confidence            4322      12345678999999999999899999999999999999999 9999976432   222333222211111


Q ss_pred             ---CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         142 ---RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       142 ---~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                         .+..++.++.+++.+||+.||++|||+.++++.|..+....
T Consensus       239 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~  282 (296)
T 3uzp_A          239 IEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ  282 (296)
T ss_dssp             HHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence               22568899999999999999999999999999998876554

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.1e-34  Score=249.65  Aligned_cols=173  Identities=17%  Similarity=0.170  Sum_probs=141.1

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.++|.+.+...        ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       138 lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~N--ILld~~g~vkL~DFGla~~~~~~  215 (412)
T 2vd5_A          138 LVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDN--ILLDRCGHIRLADFGSCLKLRAD  215 (412)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECCTT
T ss_pred             EEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHH--eeecCCCCEEEeechhheeccCC
Confidence            468999988888876532        12346678899999999999999999999  99999999999999999886555


Q ss_pred             ceeecCCCCcCcccCCCcccC-------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC---CC
Q psy2787          73 CYVMTERKPLPCPWCPMESLK-------HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL---PR  142 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~-------~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~---~~  142 (251)
                      .........||+.|+|||++.       ...++.++|||||||++|||++ |+.||.+.+..+....+.......   ..
T Consensus       216 ~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~  294 (412)
T 2vd5_A          216 GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY-GQTPFYADSTAETYGKIVHYKEHLSLPLV  294 (412)
T ss_dssp             SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTHHHHCCCC--
T ss_pred             CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHh-CCCCCCCCCHHHHHHHHHhcccCcCCCcc
Confidence            444445668999999999987       3568899999999999999999 999999988888877775432222   22


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCC---CCHHHHHHHHHh
Q psy2787         143 PEACPVEVYALMRQCWSKNPAER---PKFSTLKDCLYR  177 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~R---ps~~~il~~l~~  177 (251)
                      +..++.++.+++.+||. +|++|   |+++++++|-+.
T Consensus       295 ~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff  331 (412)
T 2vd5_A          295 DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFF  331 (412)
T ss_dssp             --CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGG
T ss_pred             ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCc
Confidence            35799999999999999 99998   589999988654

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=7.7e-34  Score=235.03  Aligned_cols=176  Identities=20%  Similarity=0.370  Sum_probs=130.6

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.......        .++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++......
T Consensus        96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~  173 (289)
T 3og7_A           96 IVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNN--IFLHEDNTVKIGDFGLATEKSRW  173 (289)
T ss_dssp             EEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEEETTTEEEECCCC--------
T ss_pred             EEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccce--EEECCCCCEEEccceeccccccc
Confidence            35789998888887753322        345677899999999999999999999  99999999999999999864321


Q ss_pred             -ceeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHH-HHHHHhcCCCCC---CCC
Q psy2787          73 -CYVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQI-LQKIDREGERLP---RPE  144 (251)
Q Consensus        73 -~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~-~~~i~~~~~~~~---~~~  144 (251)
                       .........+|..|+|||++.   +..++.++||||+|+++|+|++ |..||.+....+. ...+........   ...
T Consensus       174 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (289)
T 3og7_A          174 SGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIEMVGRGSLSPDLSKVRS  252 (289)
T ss_dssp             ----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHH-SSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCT
T ss_pred             cccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHH-CCCCccccchHHHHHHHhcccccCcchhhccc
Confidence             122234456889999999986   5668889999999999999999 9999988655443 344333322222   235


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      .++.++.+++.+||+.||++|||+.++++.|+.+.
T Consensus       253 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          253 NCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence            78899999999999999999999999999998775

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.2e-33  Score=243.73  Aligned_cols=171  Identities=15%  Similarity=0.205  Sum_probs=138.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.++|...+...       ...++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+++......
T Consensus       130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~N--ILl~~~g~ikL~DFGla~~~~~~~  207 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN--VLLDSEGHIKLTDYGMCKEGLRPG  207 (396)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH--EEECCCCCEEEeecceeeecccCC
Confidence            468999999988765432       23456788899999999999999999999  999999999999999998632221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---------hhHHHHHHHhcCCCCCCCC
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN---------GMQILQKIDREGERLPRPE  144 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~---------~~~~~~~i~~~~~~~~~~~  144 (251)
                       .......||+.|+|||++.+..++.++||||+||++|||++ |..||.+..         ...+...+...  ....|.
T Consensus       208 -~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~-G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~  283 (396)
T 4dc2_A          208 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPR  283 (396)
T ss_dssp             -CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSTTTTC------CCHHHHHHHHHHC--CCCCCT
T ss_pred             -CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHh-CCCCCcccccccccchhhHHHHHHHHhcc--ccCCCC
Confidence             13455689999999999999999999999999999999999 999996431         23344555443  344566


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCH------HHHHHHHHh
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKF------STLKDCLYR  177 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~------~~il~~l~~  177 (251)
                      .++.++.+++.+||+.||++||++      .++++|.+.
T Consensus       284 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff  322 (396)
T 4dc2_A          284 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  322 (396)
T ss_dssp             TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred             cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence            799999999999999999999985      688887654

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3.3e-34  Score=237.99  Aligned_cols=177  Identities=16%  Similarity=0.182  Sum_probs=137.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        88 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~  165 (294)
T 4eqm_A           88 LVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQN--ILIDSNKTLKIFDFGIAKALSETS  165 (294)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTSCEEECCCSSSTTC----
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEECCCCCEEEEeCCCcccccccc
Confidence            367899888888765432       23356688899999999999999999999  999999999999999998765544


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC---CCCCCCcHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL---PRPEACPVEV  150 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~  150 (251)
                      ........||+.|+|||++.+..++.++||||+|+++|+|++ |..||.+....+............   ..+..++..+
T Consensus       166 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  244 (294)
T 4eqm_A          166 LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLV-GEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSL  244 (294)
T ss_dssp             ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHH-SSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHH
T ss_pred             ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHH
Confidence            334455678999999999999889999999999999999999 999999887766555443332221   1246789999


Q ss_pred             HHHHHHHhccCCCCCC-CHHHHHHHHHhhcH
Q psy2787         151 YALMRQCWSKNPAERP-KFSTLKDCLYRLTP  180 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rp-s~~~il~~l~~~~~  180 (251)
                      .+++.+||+.||++|| +++++.+.|..+..
T Consensus       245 ~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~  275 (294)
T 4eqm_A          245 SNVILRATEKDKANRYKTIQEMKDDLSSVLH  275 (294)
T ss_dssp             HHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred             HHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence            9999999999999998 88888888877654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=4.2e-34  Score=235.14  Aligned_cols=174  Identities=22%  Similarity=0.548  Sum_probs=139.7

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+...         ...++.+++.||+|||++||+||||||+|  |+++.++.+||+|||++.....
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A           92 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN--VLVSEDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECTTSCEEECCCCC------
T ss_pred             EEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcce--EEEeCCCcEEEeeccccccccc
Confidence            357888877777655421         23456788899999999999999999999  9999999999999999986443


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .    .....++..|+|||++.+..++.++||||||+++|+|+++|..||.+....+....+. .+.....+..+++.+.
T Consensus       170 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~  244 (278)
T 1byg_A          170 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVY  244 (278)
T ss_dssp             ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT-TTCCCCCCTTCCHHHH
T ss_pred             c----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCcccCCHHHH
Confidence            2    2233567789999999988899999999999999999976999999887777776663 4555666778999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +++.+||+.||++|||+.++++.|+.+...
T Consensus       245 ~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          245 EVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            999999999999999999999999887654

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=9.1e-34  Score=236.55  Aligned_cols=170  Identities=17%  Similarity=0.163  Sum_probs=136.2

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||+. ++|.+.+....         ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        97 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~N--il~~~~~~~kl~Dfg~a~~~~~~  173 (308)
T 3g33_A           97 VFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPEN--ILVTSGGTVKLADFGLARIYSYQ  173 (308)
T ss_dssp             EEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTT--EEECTTSCEEECSCSCTTTSTTC
T ss_pred             Eehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEEcCCCCEEEeeCccccccCCC
Confidence            567776 47776655432         2346778899999999999999999999  99999999999999999875433


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC-----------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP-----------  141 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~-----------  141 (251)
                      .  ......+|+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+....+......++           
T Consensus       174 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  250 (308)
T 3g33_A          174 M--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP  250 (308)
T ss_dssp             C--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTT-SSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSC
T ss_pred             c--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcc
Confidence            2  2234567889999999998889999999999999999999 9999999887776665543211100           


Q ss_pred             --------------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         142 --------------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       142 --------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                    ..+.++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~  300 (308)
T 3g33_A          251 RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL  300 (308)
T ss_dssp             GGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC
T ss_pred             ccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccc
Confidence                          013578899999999999999999999999988654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.1e-33  Score=233.05  Aligned_cols=178  Identities=24%  Similarity=0.481  Sum_probs=144.1

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+.....        .++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~N--il~~~~~~~kl~Dfg~a~~~~~~  181 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARN--CMLDEKFTVKVADFGLARDMYDK  181 (298)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECTTCCEEECSCGGGCCCSCG
T ss_pred             EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchhe--EEECCCCCEEECccccccccccc
Confidence            35789988898887754322        234577899999999999999999999  99999999999999999875433


Q ss_pred             ce---eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          73 CY---VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        73 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      ..   .......+|+.|+|||++.+..++.++||||+|+++|+|+++|.+||.+....+....+. .+.....+..++.+
T Consensus       182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~  260 (298)
T 3f66_A          182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDP  260 (298)
T ss_dssp             GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH-TTCCCCCCTTCCHH
T ss_pred             chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-cCCCCCCCccCCHH
Confidence            21   123345677889999999988999999999999999999996667787776666666553 45555666789999


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +.+++.+||+.||++|||+.++++.|..+...
T Consensus       261 l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~  292 (298)
T 3f66_A          261 LYEVMLKCWHPKAEMRPSFSELVSRISAIFST  292 (298)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            99999999999999999999999999887653

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=1.7e-34  Score=242.71  Aligned_cols=178  Identities=13%  Similarity=0.173  Sum_probs=136.7

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhC----------CcccCCCCCCCceEEEccCCceEEccCC
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVN----------NICSCQFSSSSLLILFFSSSSSSSGDFG   64 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~----------~iiHrdlkp~ni~il~~~~~~~kl~DFG   64 (251)
                      +.+||++.++|.+.+...      ...++.|++.||+|||+.          +|+||||||+|  |+++.++.+||+|||
T Consensus        99 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~N--ill~~~~~~kL~DFg  176 (322)
T 3soc_A           99 LITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKN--VLLKNNLTACIADFG  176 (322)
T ss_dssp             EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGG--EEECTTCCEEECCCT
T ss_pred             EEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHh--EEECCCCeEEEccCC
Confidence            368999888888876542      233566788999999999          99999999999  999999999999999


Q ss_pred             CCcccCCCce-eecCCCCcCcccCCCcccCCC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCCC-------------
Q psy2787          65 MMRYSQNDCY-VMTERKPLPCPWCPMESLKHN-----QFSQASDAWMFGVTIWEMFTFGAEPWVGLN-------------  125 (251)
Q Consensus        65 la~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~-----~~~~~~Di~S~G~il~el~~~g~~pf~~~~-------------  125 (251)
                      +++....... .......+|+.|+|||++.+.     .++.++|||||||++|||++ |..||.+..             
T Consensus       177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~  255 (322)
T 3soc_A          177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS-RCTAADGPVDEYMLPFEEEIGQ  255 (322)
T ss_dssp             TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHT-TBTTSSSCCCCCCCTTHHHHCS
T ss_pred             cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHh-CCCCCCCCcchhccchhhhhcc
Confidence            9987544322 223446789999999999863     35568899999999999999 999996532             


Q ss_pred             ---hhHHHHHHHhcCCCCCCCC-----CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         126 ---GMQILQKIDREGERLPRPE-----ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       126 ---~~~~~~~i~~~~~~~~~~~-----~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                         ...+...+.....++..+.     .++.++.+++.+||+.||++|||+.++++.|+.+...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          256 HPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence               2233333333333333222     2345699999999999999999999999999988653

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=9.6e-34  Score=239.78  Aligned_cols=153  Identities=17%  Similarity=0.225  Sum_probs=125.2

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC--ceEEccCCCCcccCC---CceeecCCCCcCcccCCCcccCC--
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS--SSSSGDFGMMRYSQN---DCYVMTERKPLPCPWCPMESLKH--   94 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~--~~kl~DFGla~~~~~---~~~~~~~~~~~~~~y~aPE~~~~--   94 (251)
                      ++.|++.||+|||+++|+||||||+|  |+++.++  .+||+|||+++....   ..........+|+.|+|||++.+  
T Consensus       173 i~~qi~~~l~~LH~~~ivH~Dlkp~N--Ill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  250 (345)
T 3hko_A          173 IMRQIFSALHYLHNQGICHRDIKPEN--FLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN  250 (345)
T ss_dssp             HHHHHHHHHHHHHHTTEECCCCCGGG--EEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS
T ss_pred             HHHHHHHHHHHHHHCCccccCCChhh--EEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC
Confidence            56788899999999999999999999  8897766  899999999986432   22223445678999999999875  


Q ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy2787          95 NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPVEVYALMRQCWSKNPAERPKFSTLK  172 (251)
Q Consensus        95 ~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~Rps~~~il  172 (251)
                      ..++.++||||||+++|+|++ |..||.+....+....+.......+.+  ..+++++.+++.+||+.||++|||+.+++
T Consensus       251 ~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l  329 (345)
T 3hko_A          251 ESYGPKCDAWSAGVLLHLLLM-GAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL  329 (345)
T ss_dssp             SCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHH-CCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHh
Confidence            568899999999999999999 999999988888777776665554433  34789999999999999999999999999


Q ss_pred             HHHHh
Q psy2787         173 DCLYR  177 (251)
Q Consensus       173 ~~l~~  177 (251)
                      +|.+-
T Consensus       330 ~hp~~  334 (345)
T 3hko_A          330 QHPWI  334 (345)
T ss_dssp             HSHHH
T ss_pred             cChhh
Confidence            98653

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=8.4e-34  Score=238.44  Aligned_cols=175  Identities=15%  Similarity=0.251  Sum_probs=143.3

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.....      ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++........
T Consensus       119 lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N--Ill~~~~~~kl~Dfg~~~~~~~~~~  196 (321)
T 2c30_A          119 VLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDS--ILLTLDGRVKLSDFGFCAQISKDVP  196 (321)
T ss_dssp             EEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTCCEEECCCTTCEECCSSSC
T ss_pred             EEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEECCCCcEEEeeeeeeeecccCcc
Confidence            468999888888876542      12346677899999999999999999999  9999999999999999987544321


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-CCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-LPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~l  153 (251)
                       ......||+.|+|||++.+..++.++||||||+++|+|++ |..||.+....+....+...... ...+..++.++.++
T Consensus       197 -~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  274 (321)
T 2c30_A          197 -KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD-GEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDF  274 (321)
T ss_dssp             -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHH
T ss_pred             -ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHH
Confidence             2345678999999999999889999999999999999999 99999988777776666443222 22334688999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +.+||+.||++|||+.++++|.+-..
T Consensus       275 i~~~l~~dp~~Rps~~ell~hp~~~~  300 (321)
T 2c30_A          275 LERMLVRDPQERATAQELLDHPFLLQ  300 (321)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGGG
T ss_pred             HHHHccCChhhCcCHHHHhcChhhcc
Confidence            99999999999999999999876543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=5.6e-34  Score=260.96  Aligned_cols=171  Identities=17%  Similarity=0.244  Sum_probs=145.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.++|...+...       ...++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+++......
T Consensus       419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~N--ILl~~~g~ikL~DFGla~~~~~~~  496 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN--VMLDSEGHIKIADFGMCKENIWDG  496 (674)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTT--EEECSSSCEEECCCTTCEECCCTT
T ss_pred             EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhh--EEEcCCCcEEEeecceeeccccCC
Confidence            468999999998866532       23456788899999999999999999999  999999999999999998633222


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..++...+....  ...+..++.++.+|
T Consensus       497 ~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyellt-G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~l  572 (674)
T 3pfq_A          497 V-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLA-GQAPFEGEDEDELFQSIMEHN--VAYPKSMSKEAVAI  572 (674)
T ss_dssp             C-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHSSC--CCCCTTSCHHHHHH
T ss_pred             c-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHc-CCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHHHH
Confidence            1 3455679999999999999999999999999999999999 999999999888888886554  44556899999999


Q ss_pred             HHHHhccCCCCCCCH-----HHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKF-----STLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~-----~~il~~l~~  177 (251)
                      +.+||+.||++||++     .+|++|.+.
T Consensus       573 i~~lL~~dP~~R~~~~~~~~~ei~~h~ff  601 (674)
T 3pfq_A          573 CKGLMTKHPGKRLGCGPEGERDIKEHAFF  601 (674)
T ss_dssp             HHHHSCSSSTTCTTCSTTHHHHHHSSGGG
T ss_pred             HHHHccCCHHHCCCCCCCcHHHHhcCccc
Confidence            999999999999997     888877553

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=4.4e-33  Score=227.66  Aligned_cols=171  Identities=22%  Similarity=0.353  Sum_probs=145.2

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCC--cccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+.+.....         .++.|++.||+|||+++  |+||||||+|  |+++.++.++|+|||++...
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~N--il~~~~~~~~l~~~~~~~~~  163 (271)
T 3kmu_A           86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRS--VMIDEDMTARISMADVKFSF  163 (271)
T ss_dssp             EEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGG--EEECTTSCEEEEGGGSCCTT
T ss_pred             eeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccce--EEEcCCcceeEEeccceeee
Confidence            35799998899887765432         23556779999999999  9999999999  99999999999988887543


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCC---chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFS---QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEAC  146 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  146 (251)
                      ..      ....+|+.|+|||++.+..++   .++||||||+++|+|++ |..||.+....+....+...+..+..+..+
T Consensus       164 ~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (271)
T 3kmu_A          164 QS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT-REVPFADLSNMEIGMKVALEGLRPTIPPGI  236 (271)
T ss_dssp             SC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHH-CSCTTTTSCHHHHHHHHHHSCCCCCCCTTC
T ss_pred             cc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHh-CCCCccccChHHHHHHHHhcCCCCCCCCCC
Confidence            22      335678899999999875544   48999999999999999 999999988888777777777788888899


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +.++.+++.+||+.||++|||+.++++.|..+..
T Consensus       237 ~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          237 SPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            9999999999999999999999999999988753

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=9.6e-34  Score=238.38  Aligned_cols=180  Identities=24%  Similarity=0.493  Sum_probs=145.0

Q ss_pred             CcccccchhHHHHHhcCCC--------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc---CCceEEccC
Q psy2787           1 MSANFAELNAFQENYTEPC--------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS---SSSSSSGDF   63 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~---~~~~kl~DF   63 (251)
                      +.+||++.++|.+++....              ..++.|++.||.|||++||+||||||+|  |+++.   +..+||+||
T Consensus       110 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~N--Ili~~~~~~~~~kl~Df  187 (327)
T 2yfx_A          110 ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARN--CLLTCPGPGRVAKIGDF  187 (327)
T ss_dssp             EEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEESCSSTTCCEEECCC
T ss_pred             EEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhH--EEEecCCCcceEEECcc
Confidence            3578988888887665432              1235678899999999999999999999  99984   446999999


Q ss_pred             CCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC
Q psy2787          64 GMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR  142 (251)
Q Consensus        64 Gla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~  142 (251)
                      |+++...... ........+++.|+|||++.+..++.++||||||+++|+|+++|..||.+....+....+. .+.....
T Consensus       188 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~~~~~~  266 (327)
T 2yfx_A          188 GMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT-SGGRMDP  266 (327)
T ss_dssp             HHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TTCCCCC
T ss_pred             ccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh-cCCCCCC
Confidence            9998643322 2223345678889999999888899999999999999999976899999888777777664 4455566


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      +..++..+.+++.+||+.||++|||+.+++++|+.+.....
T Consensus       267 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~  307 (327)
T 2yfx_A          267 PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  307 (327)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence            77899999999999999999999999999999998866543

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=1.5e-33  Score=239.54  Aligned_cols=169  Identities=17%  Similarity=0.258  Sum_probs=138.1

Q ss_pred             CcccccchhHHHHHhcC---C-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTE---P-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~---~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||+. |++.+.+..   .     ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       131 lv~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~~kL~DfG~a~~~~~~  207 (348)
T 1u5q_A          131 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN--ILLSEPGLVKLGDFGSASIMAPA  207 (348)
T ss_dssp             EEEECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGG--EEEETTTEEEECCCTTCBSSSSB
T ss_pred             EEEecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH--EEECCCCCEEEeeccCceecCCC
Confidence            3578886 455554321   1     22356678899999999999999999999  99999999999999999865432


Q ss_pred             ceeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                           ....||+.|+|||++.   ...++.++|||||||++|||++ |..||.+.+.......+.........+..++..
T Consensus       208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (348)
T 1u5q_A          208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNESPALQSGHWSEY  281 (348)
T ss_dssp             -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHH
T ss_pred             -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHH
Confidence                 3457889999999984   5678999999999999999999 999999887776666665555544455678999


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +.+++.+||+.||++|||+.+++++.+-.
T Consensus       282 l~~li~~~l~~dP~~Rps~~~ll~h~~~~  310 (348)
T 1u5q_A          282 FRNFVDSCLQKIPQDRPTSEVLLKHRFVL  310 (348)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHHHHHcccChhhCcCHHHHhhChhhh
Confidence            99999999999999999999999987754

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=9.4e-35  Score=245.71  Aligned_cols=170  Identities=13%  Similarity=0.191  Sum_probs=137.6

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||+ .|++++.+..       ....++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        86 lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~N--Ill~~~~~~kl~DFG~s~~~~~~~  162 (336)
T 3h4j_B           86 MVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPEN--LLLDDNLNVKIADFGLSNIMTDGN  162 (336)
T ss_dssp             EEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTT--EEECTTCCEEECCSSCTBTTTTSB
T ss_pred             EEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhh--EEEcCCCCEEEEEeccceeccCCc
Confidence            467888 4677775432       123457788899999999999999999999  999999999999999998755432


Q ss_pred             eeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        ......||+.|+|||++.+..+ +.++||||+||++|+|++ |..||.+.....+...+  .......+..+++++.+
T Consensus       163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~-g~~Pf~~~~~~~~~~~i--~~~~~~~p~~~s~~~~~  237 (336)
T 3h4j_B          163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLV-GRLPFDDEFIPNLFKKV--NSCVYVMPDFLSPGAQS  237 (336)
T ss_dssp             --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHH-SSCSSBCSSSTTCBCCC--CSSCCCCCTTSCHHHHH
T ss_pred             --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHh-CCCCCCCccHHHHHHHH--HcCCCCCcccCCHHHHH
Confidence              2345578999999999988775 689999999999999999 99999876554443333  12233456778999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.+||..||.+|||+.++++|.+-.
T Consensus       238 li~~~L~~dP~~Rpt~~eil~hp~~~  263 (336)
T 3h4j_B          238 LIRRMIVADPMQRITIQEIRRDPWFN  263 (336)
T ss_dssp             HHHTTSCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHHhChhhc
Confidence            99999999999999999999987753

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.2e-34  Score=242.18  Aligned_cols=175  Identities=15%  Similarity=0.207  Sum_probs=139.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-   72 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++..... 
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~N--Ill~~~~~~kl~Dfg~a~~~~~~~  159 (323)
T 3tki_A           82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN--LLLDERDNLKISDFGLATVFRYNN  159 (323)
T ss_dssp             EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCCEEECCCTTCEECEETT
T ss_pred             EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHH--EEEeCCCCEEEEEeeccceeccCC
Confidence            468999999988876543       23456788899999999999999999999  99999999999999999874322 


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChh-HHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGM-QILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .........||+.|+|||++.+..+ +.++||||+||++|+|++ |..||.+.... ..................++.++
T Consensus       160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (323)
T 3tki_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP  238 (323)
T ss_dssp             EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHH-SSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred             cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHh-CCCCCCCCchHHHHHHHHhcccccCCccccCCHHH
Confidence            2223445678999999999987765 678999999999999999 99999876543 23333333333333346688999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+++.+||+.||++|||+.+++++.+..
T Consensus       239 ~~li~~~L~~dP~~R~t~~eil~h~~~~  266 (323)
T 3tki_A          239 LALLHKILVENPSARITIPDIKKDRWYN  266 (323)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             HHHHHHHccCChhhCcCHHHHhhChhhc
Confidence            9999999999999999999999887643

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.9e-33  Score=240.97  Aligned_cols=177  Identities=14%  Similarity=0.122  Sum_probs=144.9

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEE--ccCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILF--FSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~--~~~~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+...        ...++.|++.||+|||+++|+||||||+|  |++  +.++.+||+|||+++...
T Consensus       163 lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~~~~kl~DFG~a~~~~  240 (373)
T 2x4f_A          163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPEN--ILCVNRDAKQIKIIDFGLARRYK  240 (373)
T ss_dssp             EEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEEEETTTTEEEECCCSSCEECC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHH--EEEecCCCCcEEEEeCCCceecC
Confidence            468999888887755432        12345688899999999999999999999  776  667899999999998765


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~  148 (251)
                      ...  ......||+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+.......+.  ...+++
T Consensus       241 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  317 (373)
T 2x4f_A          241 PRE--KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLS-GLSPFLGDNDAETLNNILACRWDLEDEEFQDISE  317 (373)
T ss_dssp             TTC--BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCH
T ss_pred             Ccc--ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhccCCCChhhhccCCH
Confidence            432  2334568999999999998889999999999999999999 99999998888777777665444332  256899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ++.+++.+||..||++|||+.++++|.+-.....
T Consensus       318 ~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~~  351 (373)
T 2x4f_A          318 EAKEFISKLLIKEKSWRISASEALKHPWLSDHKL  351 (373)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCch
Confidence            9999999999999999999999999877655443

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2e-33  Score=236.75  Aligned_cols=172  Identities=19%  Similarity=0.240  Sum_probs=139.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~N--ill~~~~~~kl~Dfg~~~~~~~~~  175 (327)
T 3a62_A           98 LILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPEN--IMLNHQGHVKLTDFGLCKESIHDG  175 (327)
T ss_dssp             EEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTT--EEECTTSCEEECCCSCC-------
T ss_pred             EEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHH--eEECCCCcEEEEeCCcccccccCC
Confidence            468999888888765432       22346688899999999999999999999  999999999999999998643222


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++||||+|+++|+|++ |..||.+.+..+....+....  ...+..++.++.++
T Consensus       176 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~l  251 (327)
T 3a62_A          176 -TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLT-GAPPFTGENRKKTIDKILKCK--LNLPPYLTQEARDL  251 (327)
T ss_dssp             ----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHTC--CCCCTTSCHHHHHH
T ss_pred             -ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHH
Confidence             12345678999999999998889999999999999999999 999999988888777776543  34456789999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~~  178 (251)
                      +.+||..||++||     ++.++++|.+--
T Consensus       252 i~~~L~~dp~~R~~~~~~~~~e~l~hp~f~  281 (327)
T 3a62_A          252 LKKLLKRNAASRLGAGPGDAGEVQAHPFFR  281 (327)
T ss_dssp             HHHHSCSCGGGSTTSSTTTHHHHHHSGGGS
T ss_pred             HHHHHhcCHhhccCCCCCCHHHHHcCCccc
Confidence            9999999999999     788999987653

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1.3e-33  Score=248.66  Aligned_cols=170  Identities=12%  Similarity=0.224  Sum_probs=144.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+++...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        93 lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~N--Ill~~~~~vkL~DFG~a~~~~~~~  170 (476)
T 2y94_A           93 MVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPEN--VLLDAHMNAKIADFGLSNMMSDGE  170 (476)
T ss_dssp             EEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGG--EEECTTCCEEECCCSSCEECCTTC
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHH--EEEecCCCeEEEeccchhhccccc
Confidence            468999999999877543       22356788899999999999999999999  999999999999999998755432


Q ss_pred             eeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        ......||+.|+|||++.+..+ +.++||||+||++|+|++ |..||.+.....+...+...  ....+..+++++.+
T Consensus       171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ellt-G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~  245 (476)
T 2y94_A          171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC-GTLPFDDDHVPTLFKKICDG--IFYTPQYLNPSVIS  245 (476)
T ss_dssp             --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH-SSCSSCCSSSHHHHHHHHTT--CCCCCTTCCHHHHH
T ss_pred             --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhh-CCCCCCCCCHHHHHHHHhcC--CcCCCccCCHHHHH
Confidence              2345578999999999988765 689999999999999999 99999998887887777543  33455678999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+||..||++|||+.++++|.+-
T Consensus       246 Li~~~L~~dP~~Rpt~~eil~hp~~  270 (476)
T 2y94_A          246 LLKHMLQVDPMKRATIKDIREHEWF  270 (476)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTCHHH
T ss_pred             HHHHHcCCCchhCcCHHHHHhCHHh
Confidence            9999999999999999999998664

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=4e-34  Score=238.94  Aligned_cols=177  Identities=15%  Similarity=0.202  Sum_probs=138.3

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           84 FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHN--CLVRENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             EEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTS--EEECTTSCEEECCCTTCEECC--
T ss_pred             EEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCe--EEECCCCCEEEeecccceecccc
Confidence            3679998888888765422        2345678899999999999999999999  99999999999999999875433


Q ss_pred             cee-------------ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH-----HHHHHH
Q psy2787          73 CYV-------------MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ-----ILQKID  134 (251)
Q Consensus        73 ~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~-----~~~~i~  134 (251)
                      ...             ......||+.|+|||++.+..++.++||||||+++|+|++ |..||.......     ......
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~-g~~~~~~~~~~~~~~~~~~~~~~  240 (310)
T 3s95_A          162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG-RVNADPDYLPRTMDFGLNVRGFL  240 (310)
T ss_dssp             ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-TCCSSTTTSCBCTTSSBCHHHHH
T ss_pred             cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhc-CCCCCcchhhhHHHHhhhhhccc
Confidence            211             1124578999999999999999999999999999999999 999986532211     011111


Q ss_pred             hcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHHH
Q psy2787         135 REGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMK  184 (251)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~~  184 (251)
                      .    ...+..+++++.+++.+||+.||++|||+.++++.|+.+......
T Consensus       241 ~----~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~  286 (310)
T 3s95_A          241 D----RYCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG  286 (310)
T ss_dssp             H----HTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             c----ccCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence            1    123456888999999999999999999999999999998876654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=1.8e-33  Score=242.18  Aligned_cols=172  Identities=15%  Similarity=0.223  Sum_probs=142.5

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc--CCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS--SSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~--~~~~kl~DFGla~~~~   70 (251)
                      |.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.  .+.+||+|||+++...
T Consensus       125 lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~N--Ill~~~~~~~vkL~DFG~a~~~~  202 (387)
T 1kob_A          125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN--IMCETKKASSVKIIDFGLATKLN  202 (387)
T ss_dssp             EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHH--eEEecCCCCceEEEecccceecC
Confidence            4689999999998776432        2346678899999999999999999999  88874  4689999999998765


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~  148 (251)
                      ....  .....+|+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+....+.......+  ....++.
T Consensus       203 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  279 (387)
T 1kob_A          203 PDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP  279 (387)
T ss_dssp             TTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCH
T ss_pred             CCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCCccccccCCH
Confidence            4322  123468899999999999889999999999999999999 9999999888777777765544332  2356899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+++.+||..||++|||+.++++|.+-
T Consensus       280 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~  308 (387)
T 1kob_A          280 EAKDFIKNLLQKEPRKRLTVHDALEHPWL  308 (387)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHTSTTT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhhCccc
Confidence            99999999999999999999999998653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=8.8e-34  Score=233.35  Aligned_cols=169  Identities=14%  Similarity=0.236  Sum_probs=139.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.....       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++...... 
T Consensus        86 lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~N--ili~~~~~~~l~Dfg~~~~~~~~-  162 (279)
T 3fdn_A           86 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN--LLLGSAGELKIADFGWSVHAPSS-  162 (279)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGG--EEECTTSCEEECSCCEESCC----
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHh--EEEcCCCCEEEEeccccccCCcc-
Confidence            357899888887765432       22456788899999999999999999999  99999999999999998654333 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                        ......++..|+|||++.+..++.++||||+|+++|+|++ |..||.+....+....+...  ....+..++..+.++
T Consensus       163 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l  237 (279)
T 3fdn_A          163 --RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFEANTYQETYKRISRV--EFTFPDFVTEGARDL  237 (279)
T ss_dssp             -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHH
T ss_pred             --cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHH-CCCCCCCCcHHHHHHHHHhC--CCCCCCcCCHHHHHH
Confidence              2234567889999999999889999999999999999999 99999998887777776543  334456789999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+||+.||++|||+.++++|.+-
T Consensus       238 i~~~l~~~p~~Rps~~e~l~h~~~  261 (279)
T 3fdn_A          238 ISRLLKHNPSQRPMLREVLEHPWI  261 (279)
T ss_dssp             HHHHCCSSGGGSCCHHHHHHCHHH
T ss_pred             HHHHhccChhhCCCHHHHhhCccc
Confidence            999999999999999999998764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=8.1e-34  Score=240.89  Aligned_cols=171  Identities=15%  Similarity=0.205  Sum_probs=138.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        87 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~g~~kL~DFG~a~~~~~~~  164 (345)
T 3a8x_A           87 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN--VLLDSEGHIKLTDYGMCKEGLRPG  164 (345)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTSCEEECCGGGCBCSCCTT
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH--EEECCCCCEEEEeccccccccCCC
Confidence            468999988888765432       23356788899999999999999999999  999999999999999998632221


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---------ChhHHHHHHHhcCCCCCCCC
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL---------NGMQILQKIDREGERLPRPE  144 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~---------~~~~~~~~i~~~~~~~~~~~  144 (251)
                       .......||+.|+|||++.+..++.++||||+||++|||++ |..||...         ....+...+...  ....+.
T Consensus       165 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~  240 (345)
T 3a8x_A          165 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA-GRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPR  240 (345)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTTTC-------CHHHHHHHHHHC--CCCCCT
T ss_pred             -CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHh-CCCCcCCcccccccccccHHHHHHHHHcC--CCCCCC
Confidence             12345678999999999999899999999999999999999 99999652         223445555444  344567


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCH------HHHHHHHHh
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKF------STLKDCLYR  177 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~------~~il~~l~~  177 (251)
                      .++.++.+++.+||..||++||++      .++++|.+.
T Consensus       241 ~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f  279 (345)
T 3a8x_A          241 SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  279 (345)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred             CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence            899999999999999999999995      788877654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=8.5e-34  Score=241.24  Aligned_cols=174  Identities=15%  Similarity=0.189  Sum_probs=138.4

Q ss_pred             CcccccchhHHHHHhcC-----------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc---eEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTE-----------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS---SSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-----------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~---~kl~DFGla   66 (251)
                      +.+||++.++|.+.+..           ....++.|++.||+|||+++|+||||||+|  |+++.++.   +||+|||++
T Consensus       103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~N--Il~~~~~~~~~vkl~Dfg~a  180 (351)
T 3c0i_A          103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHC--VLLASKENSAPVKLGGFGVA  180 (351)
T ss_dssp             EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECSSSTTCCEEECCCTTC
T ss_pred             EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHH--eEEecCCCCCcEEEecCcce
Confidence            46899998888664322           122356788999999999999999999999  99976554   999999999


Q ss_pred             cccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CC
Q psy2787          67 RYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PE  144 (251)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~  144 (251)
                      +....... ......||+.|+|||++.+..++.++||||+||++|+|++ |..||.+.. .++...+.........  ..
T Consensus       181 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~  257 (351)
T 3c0i_A          181 IQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS-GCLPFYGTK-ERLFEGIIKGKYKMNPRQWS  257 (351)
T ss_dssp             EECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCSSH-HHHHHHHHHTCCCCCHHHHT
T ss_pred             eEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHH-CCCCCCCcH-HHHHHHHHcCCCCCCccccc
Confidence            87654322 2345678999999999999889999999999999999999 999998754 4555555444333321  15


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      .++.++.+++.+||..||++|||+.++++|.+-..
T Consensus       258 ~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          258 HISESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            68899999999999999999999999999876543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=2.8e-34  Score=243.52  Aligned_cols=175  Identities=13%  Similarity=0.100  Sum_probs=134.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC--ceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS--SSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~--~~kl~DFGla~~~~~   71 (251)
                      +.+||+ .++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++  .+||+|||+++....
T Consensus       129 lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~~~~kL~Dfg~a~~~~~  205 (345)
T 2v62_A          129 MVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAAN--LLLGYKNPDQVYLADYGLSYRYCP  205 (345)
T ss_dssp             EEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEESSSTTSEEECCCTTCEESSG
T ss_pred             EEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHH--EEEccCCCCcEEEEeCCCceeccc
Confidence            357888 78888876542       23456788899999999999999999999  8898777  999999999987533


Q ss_pred             Cce------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--ChhHHHHHHHhcCCCCC--
Q psy2787          72 DCY------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL--NGMQILQKIDREGERLP--  141 (251)
Q Consensus        72 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~--~~~~~~~~i~~~~~~~~--  141 (251)
                      ...      .......+|..|+|||++.+..++.++|||||||++|||++ |..||.+.  ................+  
T Consensus       206 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  284 (345)
T 2v62_A          206 NGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLC-GKLPWEQNLKDPVAVQTAKTNLLDELPQS  284 (345)
T ss_dssp             GGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH-SSCTTGGGTTCHHHHHHHHHHHHHTTTHH
T ss_pred             ccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHh-CCCCccccccccHHHHHHHHhhcccccHH
Confidence            211      11234578999999999999889999999999999999999 99999652  22222111111000111  


Q ss_pred             -----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         142 -----RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       142 -----~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                           ....++.++.+++.+||..||++|||+.++++.|+.+.
T Consensus       285 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          285 VLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence                 11268899999999999999999999999999998754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=1.8e-33  Score=237.03  Aligned_cols=177  Identities=14%  Similarity=0.130  Sum_probs=136.1

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc-----eEEccCCCCc
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS-----SSSGDFGMMR   67 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~-----~kl~DFGla~   67 (251)
                      |.+||+ .++|.+.+...        ...++.|++.||+|||++||+||||||+|  |+++.++.     +||+|||+++
T Consensus        82 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~N--ill~~~~~~~~~~~kl~DFg~a~  158 (330)
T 2izr_A           82 MVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPEN--FLIGRPGNKTQQVIHIIDFALAK  158 (330)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECCGGGTCTTSEEECCCTTCE
T ss_pred             EEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHH--eeeccCCCCCCceEEEEEcccce
Confidence            357888 66666655432        12346678899999999999999999999  99988887     9999999998


Q ss_pred             ccCCCcee------ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh---hHHHHHHHhcCC
Q psy2787          68 YSQNDCYV------MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG---MQILQKIDREGE  138 (251)
Q Consensus        68 ~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~---~~~~~~i~~~~~  138 (251)
                      ........      ......||+.|+|||++.+..++.++|||||||++|||++ |..||.+...   .+....+.....
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~-g~~Pf~~~~~~~~~~~~~~i~~~~~  237 (330)
T 2izr_A          159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLR-GSLPWQGLKADTLKERYQKIGDTKR  237 (330)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTTTCCCSSHHHHHHHHHHHHH
T ss_pred             eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhc-CCCCccccccccHHHHHHHHHhhhc
Confidence            75433211      2345678999999999999999999999999999999999 9999987543   333444322211


Q ss_pred             CCCC---CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         139 RLPR---PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       139 ~~~~---~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ..+.   ...+| ++.+++..||+.||.+||++.++.+.|..+....
T Consensus       238 ~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          238 ATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             cCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            1111   13456 9999999999999999999999999998765543

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=3.8e-33  Score=233.41  Aligned_cols=171  Identities=19%  Similarity=0.208  Sum_probs=131.9

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++ +++.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        96 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~N--Il~~~~~~~kl~Dfg~a~~~~~~  172 (311)
T 3niz_A           96 LVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQN--LLINSDGALKLADFGLARAFGIP  172 (311)
T ss_dssp             EEEECCS-EEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCTTCEETTSC
T ss_pred             EEEcCCC-CCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHh--EEECCCCCEEEccCcCceecCCC
Confidence            3578887 46666554332        2246688899999999999999999999  99999999999999999875433


Q ss_pred             ceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-CCCCC---------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-GERLP---------  141 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~~~~~---------  141 (251)
                      .. ......+|+.|+|||++.+ ..++.++||||+||++|+|++ |..||.+....+....+... +...+         
T Consensus       173 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  250 (311)
T 3niz_A          173 VR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMIT-GKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQEL  250 (311)
T ss_dssp             CC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTS
T ss_pred             cc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhcc
Confidence            21 2334567889999999876 458999999999999999999 99999887665555444321 10000         


Q ss_pred             ------------------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         142 ------------------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       142 ------------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                        ..+.+++++.+++.+||+.||++|||+.++++|.+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~  303 (311)
T 3niz_A          251 PLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPY  303 (311)
T ss_dssp             HHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGG
T ss_pred             chhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcc
Confidence                              01346789999999999999999999999998754

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=4.9e-33  Score=232.28  Aligned_cols=174  Identities=19%  Similarity=0.399  Sum_probs=135.1

Q ss_pred             CcccccchhHHHHHhcCCCC----------CCCchhhHHhhhhhh---CCcccCCCCCCCceEEEccCCc-eEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR----------KPLPPERRGYGTFSV---NNICSCQFSSSSLLILFFSSSS-SSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~----------~~~~~~~~gl~~lH~---~~iiHrdlkp~ni~il~~~~~~-~kl~DFGla   66 (251)
                      +.+||++.++|.+.+.....          ..+.|+++||+|||+   +||+||||||+|  |+++.++. +||+|||++
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~N--Ill~~~~~~~kl~Dfg~~  153 (307)
T 2eva_A           76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN--LLLVAGGTVLKICDFGTA  153 (307)
T ss_dssp             EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGG--EEEETTTTEEEECCCCC-
T ss_pred             EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhH--EEEeCCCCEEEEcccccc
Confidence            36899999899887764321          223477799999999   899999999999  99988886 799999999


Q ss_pred             cccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh--hHHHHHHHhcCCCCCCCC
Q psy2787          67 RYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG--MQILQKIDREGERLPRPE  144 (251)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~  144 (251)
                      ......    .....+|..|+|||++.+..++.++||||||+++|+|++ |..||.....  ......+ ..+..++.+.
T Consensus       154 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~  227 (307)
T 2eva_A          154 CDIQTH----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT-RRKPFDEIGGPAFRIMWAV-HNGTRPPLIK  227 (307)
T ss_dssp             ---------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHH-TCCTTTTTCSSHHHHHHHH-HTTCCCCCBT
T ss_pred             cccccc----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHH-CCCCchhhCccHHHHHHHH-hcCCCCCccc
Confidence            764432    223468889999999999899999999999999999999 9999976433  2233333 3455666667


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      .++..+.+++.+||+.||++|||+.++++.|..+....
T Consensus       228 ~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  265 (307)
T 2eva_A          228 NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF  265 (307)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred             ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence            89999999999999999999999999999998876543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.1e-34  Score=246.64  Aligned_cols=169  Identities=12%  Similarity=0.127  Sum_probs=130.2

Q ss_pred             CcccccchhHHHHHhcC-------CCC-------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTE-------PCR-------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~-------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      |.+||++ ++|.+++..       ...       .++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++
T Consensus       165 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~N--Ill~~~~~~kL~DFG~a  241 (371)
T 3q60_A          165 LLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDN--LFIMPDGRLMLGDVSAL  241 (371)
T ss_dssp             EEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG--EEECTTSCEEECCGGGE
T ss_pred             EEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHH--EEECCCCCEEEEeccee
Confidence            3578877 777765542       111       223789999999999999999999999  99999999999999999


Q ss_pred             cccCCCceeecCCCCcCcccCCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHH--HHH---H--HhcC
Q psy2787          67 RYSQNDCYVMTERKPLPCPWCPMESLKH--NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQI--LQK---I--DREG  137 (251)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~--~~~---i--~~~~  137 (251)
                      +......    ....+|+.|+|||++.+  ..++.++|||||||++|||++ |..||.+......  ...   .  ....
T Consensus       242 ~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~  316 (371)
T 3q60_A          242 WKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWC-LFLPFGLVTPGIKGSWKRPSLRVPGTDS  316 (371)
T ss_dssp             EETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHH-SSCSTTBCCTTCTTCCCBCCTTSCCCCS
T ss_pred             eecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHh-CCCCCCCcCcccccchhhhhhhhccccc
Confidence            8764322    13345588999999987  678999999999999999999 9999987633210  000   0  0112


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ...+....++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       317 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f  356 (371)
T 3q60_A          317 LAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEF  356 (371)
T ss_dssp             CCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHH
T ss_pred             cchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHH
Confidence            2223335789999999999999999999999999987653

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.2e-33  Score=243.52  Aligned_cols=154  Identities=18%  Similarity=0.308  Sum_probs=123.0

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCC-----
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKH-----   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~-----   94 (251)
                      .++.|++.||+|||+++|+||||||+|  |+++ ++.+||+|||+++...... ........||+.|+|||++.+     
T Consensus       159 ~i~~qi~~aL~~lH~~~ivHrDlkp~N--Ill~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  235 (390)
T 2zmd_A          159 SYWKNMLEAVHTIHQHGIVHSDLKPAN--FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR  235 (390)
T ss_dssp             HHHHHHHHHHHHHHTTTCCCCCCCGGG--EEES-SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC----
T ss_pred             HHHHHHHHHHHHHHHCCeeecCCCHHH--EEEE-CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccc
Confidence            356788999999999999999999999  8885 6899999999998754332 223345679999999999865     


Q ss_pred             ------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCC
Q psy2787          95 ------NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK  167 (251)
Q Consensus        95 ------~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps  167 (251)
                            ..++.++|||||||++|||++ |..||.+... ......+.........+...+.++.+++.+||..||++|||
T Consensus       236 ~~~~~~~~~~~~~DiwSlGvil~ell~-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps  314 (390)
T 2zmd_A          236 ENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS  314 (390)
T ss_dssp             --------CCHHHHHHHHHHHHHHHHH-SSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             cccccccCCCChhhHHHHHHHHHHHHH-CCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCC
Confidence                  358899999999999999999 9999987543 34445555555555666777899999999999999999999


Q ss_pred             HHHHHHHHHhh
Q psy2787         168 FSTLKDCLYRL  178 (251)
Q Consensus       168 ~~~il~~l~~~  178 (251)
                      +.++++|.+..
T Consensus       315 ~~ell~hp~~~  325 (390)
T 2zmd_A          315 IPELLAHPYVQ  325 (390)
T ss_dssp             HHHHHTSHHHH
T ss_pred             HHHHhhCcCcc
Confidence            99999987654

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=4.2e-33  Score=229.61  Aligned_cols=173  Identities=15%  Similarity=0.222  Sum_probs=142.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc---eEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS---SSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~---~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.....       ...++.|++.||+|||++||+||||||+|  |+++.++.   +||+|||++....
T Consensus        82 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~N--il~~~~~~~~~~kl~Dfg~~~~~~  159 (284)
T 3kk8_A           82 LVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPEN--LLLASKAKGAAVKLADFGLAIEVN  159 (284)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHH--EEEecCCCCCcEEEeeceeeEEcc
Confidence            357888888887654322       22356788899999999999999999999  99976654   9999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      ...  ......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.+.........+.......+.+  ..+++
T Consensus       160 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T 3kk8_A          160 DSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLV-GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP  236 (284)
T ss_dssp             SSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCH
T ss_pred             cCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHH-CCCCCCCCchhHHHHHHHhccccCCchhhcccCH
Confidence            432  2344678899999999999889999999999999999999 999999988888877776655444433  46899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.+++.+||+.||++|||+.++++|.+-.
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  266 (284)
T 3kk8_A          237 EAKSLIDSMLTVNPKKRITADQALKVPWIC  266 (284)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTSHHHH
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcCcccc
Confidence            999999999999999999999999987643

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=1.2e-33  Score=239.62  Aligned_cols=174  Identities=15%  Similarity=0.217  Sum_probs=139.8

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC----CceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS----SSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~----~~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+.+....       ..++.|++.||+|||++||+||||||+|  |++...    +.+||+|||+++..
T Consensus        93 lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~N--Il~~~~~~~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A           93 VVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSN--ILYVDESGNPESIRICDFGFAKQL  170 (342)
T ss_dssp             EEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEESSSSCSGGGEEECCCTTCEEC
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHH--EEEecCCCCcCeEEEEECCCcccC
Confidence            4689999999988765432       2346677899999999999999999999  887433    35999999999875


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC---CChhHHHHHHHhcCCCCC--CCC
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVG---LNGMQILQKIDREGERLP--RPE  144 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~---~~~~~~~~~i~~~~~~~~--~~~  144 (251)
                      ..... ......+|+.|+|||++.+..++.++||||+||++|+|++ |..||.+   ....++...+.......+  .+.
T Consensus       171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~  248 (342)
T 2qr7_A          171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLT-GYTPFANGPDDTPEEILARIGSGKFSLSGGYWN  248 (342)
T ss_dssp             BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-SSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTT
T ss_pred             cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhc-CCCCCCCCCcCCHHHHHHHHccCCcccCccccc
Confidence            44321 2345678999999999988778899999999999999999 9999976   345566777755544433  235


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .++.++.+++.+||..||++|||+.++++|.+-.
T Consensus       249 ~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~  282 (342)
T 2qr7_A          249 SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV  282 (342)
T ss_dssp             TSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred             cCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence            6899999999999999999999999999987763

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.2e-33  Score=241.20  Aligned_cols=173  Identities=19%  Similarity=0.255  Sum_probs=129.1

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc--eEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS--SSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~--~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+....       ....++.|++.||+|||++||+||||||+|  |+++.++.  +||+|||+++....
T Consensus        93 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~N--ill~~~~~~~~kl~Dfg~a~~~~~  170 (361)
T 3uc3_A           93 IIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLEN--TLLDGSPAPRLKICDFGYSKSSVL  170 (361)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGG--EEECSSSSCCEEECCCCCC-----
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEEcCCCCceEEEeecCccccccc
Confidence            36899988888876532       223457788899999999999999999999  99987765  99999999985322


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCch-hHHHHHHHHHHHHHhCCCCCCCCCCh----hHHHHHHHhcCCCCCCCCCC
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQA-SDAWMFGVTIWEMFTFGAEPWVGLNG----MQILQKIDREGERLPRPEAC  146 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~-~Di~S~G~il~el~~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~  146 (251)
                      ..  ......||+.|+|||++.+..++.+ +||||+||++|+|++ |..||.+...    ......+.......+....+
T Consensus       171 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (361)
T 3uc3_A          171 HS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLV-GAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRI  247 (361)
T ss_dssp             ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHH-SSCSCC----CCCHHHHHHHHHTTCCCCCTTSCC
T ss_pred             cC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHh-CCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCC
Confidence            21  2334568999999999988777655 899999999999999 9999987443    34445554455555555678


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++++.+++.+||+.||++|||+.++++|.+-.
T Consensus       248 s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  279 (361)
T 3uc3_A          248 SPECCHLISRIFVADPATRISIPEIKTHSWFL  279 (361)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHhCcchh
Confidence            99999999999999999999999999997753

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=2.3e-33  Score=241.02  Aligned_cols=170  Identities=16%  Similarity=0.249  Sum_probs=137.7

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||+..++|...+....       ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        92 lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N--Ill~~~g~vkL~DFG~a~~~~~~~  169 (384)
T 4fr4_A           92 MVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDN--ILLDEHGHVHITDFNIAAMLPRET  169 (384)
T ss_dssp             EEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHH--eEECCCCCEEEeccceeeeccCCC
Confidence            4689999999988776432       2346688899999999999999999999  999999999999999998754332


Q ss_pred             eeecCCCCcCcccCCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCC---hhHHHHHHHhcCCCCCCCCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLKH---NQFSQASDAWMFGVTIWEMFTFGAEPWVGLN---GMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~S~G~il~el~~~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                        ......||+.|+|||++.+   ..++.++||||+||++|||++ |..||.+..   ..++...+...  ....+..++
T Consensus       170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~ellt-G~~Pf~~~~~~~~~~~~~~~~~~--~~~~p~~~s  244 (384)
T 4fr4_A          170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR-GRRPYHIRSSTSSKEIVHTFETT--VVTYPSAWS  244 (384)
T ss_dssp             --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHH-SSCSSCCCTTSCHHHHHHHHHHC--CCCCCTTSC
T ss_pred             --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHh-CCCCCCCCCCccHHHHHHHHhhc--ccCCCCcCC
Confidence              3455678999999999974   458899999999999999999 999997543   34444444333  344567799


Q ss_pred             HHHHHHHHHHhccCCCCCCC-HHHHHHHHHh
Q psy2787         148 VEVYALMRQCWSKNPAERPK-FSTLKDCLYR  177 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps-~~~il~~l~~  177 (251)
                      .++.+++.+||+.||++||+ +.+++.|.+.
T Consensus       245 ~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f  275 (384)
T 4fr4_A          245 QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYM  275 (384)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGG
T ss_pred             HHHHHHHHHHhcCCHhHhcccHHHHHcChhh
Confidence            99999999999999999998 7888776543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=8.4e-34  Score=239.31  Aligned_cols=179  Identities=15%  Similarity=0.211  Sum_probs=134.3

Q ss_pred             CcccccchhHHHHHhcCCC------CCCCchhhHHhhhhhhC---------CcccCCCCCCCceEEEccCCceEEccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC------RKPLPPERRGYGTFSVN---------NICSCQFSSSSLLILFFSSSSSSSGDFGM   65 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~------~~~~~~~~~gl~~lH~~---------~iiHrdlkp~ni~il~~~~~~~kl~DFGl   65 (251)
                      +.+||++.++|.+.+....      ..++.|++.||+|||++         +|+||||||+|  |+++.++.+||+|||+
T Consensus        89 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~N--ill~~~~~~kL~DFG~  166 (336)
T 3g2f_A           89 LVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRN--VLVKNDGTCVISDFGL  166 (336)
T ss_dssp             EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGG--EEECTTSCEEECCCTT
T ss_pred             EEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccce--EEEcCCCcEEEeeccc
Confidence            4689998888888765322      23567888999999999         99999999999  9999999999999999


Q ss_pred             CcccCCCc-------eeecCCCCcCcccCCCcccCC-------CCCCchhHHHHHHHHHHHHHhCCCCCCC-CCC-----
Q psy2787          66 MRYSQNDC-------YVMTERKPLPCPWCPMESLKH-------NQFSQASDAWMFGVTIWEMFTFGAEPWV-GLN-----  125 (251)
Q Consensus        66 a~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~Di~S~G~il~el~~~g~~pf~-~~~-----  125 (251)
                      ++......       ........||+.|+|||++.+       ..++.++|||||||++|||++ |..||. +..     
T Consensus       167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~-g~~p~~~~~~~~~~~  245 (336)
T 3g2f_A          167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM-RCTDLFPGESVPEYQ  245 (336)
T ss_dssp             CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHT-TBGGGSTTSCCCCCC
T ss_pred             eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHh-cCCcCCCccchhHHH
Confidence            98754322       112234578999999999986       345678999999999999999 766552 211     


Q ss_pred             ------------hhHHHHHHHhcCCCCCCCCC------CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         126 ------------GMQILQKIDREGERLPRPEA------CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       126 ------------~~~~~~~i~~~~~~~~~~~~------~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                                  .......+.....++..+..      ++.++.+++.+||+.||++|||+.++++.|..+....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          246 MAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             CTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             HhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence                        11222222233334433333      4558999999999999999999999999999887554

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=9.8e-35  Score=249.24  Aligned_cols=161  Identities=11%  Similarity=0.007  Sum_probs=125.9

Q ss_pred             CcccccchhHHHHHhcC--------------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTE--------------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~--------------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      |.+||+. |+|.+.+..              .+..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++
T Consensus       177 lv~E~~~-g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~N--Ill~~~~~~kL~DFG~a  253 (377)
T 3byv_A          177 FLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD--IVLDQRGGVFLTGFEHL  253 (377)
T ss_dssp             EEEECCS-EEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEECTTCCEEECCGGGC
T ss_pred             EEEeccC-CCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCCEEEEechhh
Confidence            3567774 677765542              122467889999999999999999999999  99999999999999999


Q ss_pred             cccCCCceeecCCCCcCcccCCCcccCCC-----------CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy2787          67 RYSQNDCYVMTERKPLPCPWCPMESLKHN-----------QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR  135 (251)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-----------~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~  135 (251)
                      +.....    .....| +.|+|||++.+.           .++.++|||||||++|||++ |..||.+.........+. 
T Consensus       254 ~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ellt-g~~Pf~~~~~~~~~~~~~-  326 (377)
T 3byv_A          254 VRDGAR----VVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWC-ADLPITKDAALGGSEWIF-  326 (377)
T ss_dssp             EETTCE----EECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHH-SSCCC------CCSGGGG-
T ss_pred             eecCCc----ccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHH-CCCCCcccccccchhhhh-
Confidence            864332    223455 789999999887           79999999999999999999 999997755433322221 


Q ss_pred             cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         136 EGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       136 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                           .....++.++.+++.+||+.||++|||+.++++|.+
T Consensus       327 -----~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~  362 (377)
T 3byv_A          327 -----RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPE  362 (377)
T ss_dssp             -----SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHH
T ss_pred             -----hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChH
Confidence                 123578899999999999999999999999998754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.98  E-value=3e-33  Score=237.04  Aligned_cols=172  Identities=16%  Similarity=0.260  Sum_probs=129.1

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+|+ ..++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++ ++.+||+|||+++.......
T Consensus        87 v~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~N--Ill~-~~~~kl~DFG~a~~~~~~~~  162 (343)
T 3dbq_A           87 VMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPAN--FLIV-DGMLKLIDFGIANQMQPDTT  162 (343)
T ss_dssp             EECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEEE-TTEEEECCCSSSCCC-----
T ss_pred             EEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcce--EEEE-CCcEEEeecccccccCcccc
Confidence            4563 345666554332       22456788899999999999999999999  8886 68899999999987544322


Q ss_pred             -eecCCCCcCcccCCCcccCC-----------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCC
Q psy2787          75 -VMTERKPLPCPWCPMESLKH-----------NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLP  141 (251)
Q Consensus        75 -~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~  141 (251)
                       .......||+.|+|||++.+           ..++.++|||||||++|+|++ |..||.+... ......+........
T Consensus       163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~  241 (343)
T 3dbq_A          163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIIDPNHEIE  241 (343)
T ss_dssp             -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHH-SSCTTTTCCSHHHHHHHHHCTTSCCC
T ss_pred             cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHh-CCCcchhhhhHHHHHHHHhcCCcccC
Confidence             22345678999999999864           568899999999999999999 9999987543 233444444455556


Q ss_pred             CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         142 RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+...+.++.+++.+||+.||++|||+.++++|.+..
T Consensus       242 ~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          242 FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  278 (343)
T ss_dssp             CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence            6777889999999999999999999999999998754

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.98  E-value=5.5e-34  Score=239.28  Aligned_cols=177  Identities=13%  Similarity=0.113  Sum_probs=135.0

Q ss_pred             CcccccchhHHHHHhcCCC-----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+.+....           ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++..
T Consensus       112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~N--il~~~~~~~kl~Dfg~~~~~  189 (321)
T 2qkw_B          112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSIN--ILLDENFVPKITDFGISKKG  189 (321)
T ss_dssp             EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTT--EEECTTCCEEECCCTTCEEC
T ss_pred             EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHH--EEECCCCCEEEeeccccccc
Confidence            3578998888888765432           1245667899999999999999999999  99999999999999999864


Q ss_pred             CCC-ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHH---HH---HHHhcC-----
Q psy2787          70 QND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQI---LQ---KIDREG-----  137 (251)
Q Consensus        70 ~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~---~~---~i~~~~-----  137 (251)
                      ... .........||..|+|||++.+..++.++||||||+++|||++ |+.||.+....+.   ..   .....+     
T Consensus       190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (321)
T 2qkw_B          190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC-ARSAIVQSLPREMVNLAEWAVESHNNGQLEQI  268 (321)
T ss_dssp             SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHH-CCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred             ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHh-CCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence            322 1222344568899999999988889999999999999999999 9999976432211   11   110111     


Q ss_pred             ----CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         138 ----ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       138 ----~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                          .....+..++..+.+++.+||+.||++|||+.+++++|+.+.+
T Consensus       269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence                0111223356788999999999999999999999999987753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.98  E-value=5.3e-33  Score=234.04  Aligned_cols=172  Identities=17%  Similarity=0.218  Sum_probs=139.1

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc---CCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS---SSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~---~~~~kl~DFGla~~   68 (251)
                      +.+||++.++|.+.......         .++.|++.||+|||++||+||||||+|  |+++.   ++.+||+|||+++.
T Consensus       106 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~N--Il~~~~~~~~~~kL~Dfg~a~~  183 (327)
T 3lm5_A          106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQN--ILLSSIYPLGDIKIVDFGMSRK  183 (327)
T ss_dssp             EEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEESCBTTBCCEEECCGGGCEE
T ss_pred             EEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHH--EEEecCCCCCcEEEeeCccccc
Confidence            36899999999887754332         235577899999999999999999999  99887   78999999999987


Q ss_pred             cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC--CCCCCC
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL--PRPEAC  146 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~--~~~~~~  146 (251)
                      .....  ......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.+.+..+....+.......  .....+
T Consensus       184 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  260 (327)
T 3lm5_A          184 IGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT-HTSPFVGEDNQETYLNISQVNVDYSEETFSSV  260 (327)
T ss_dssp             C-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred             cCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCchHHHHHHHhcccccCchhhccc
Confidence            54332  2234578999999999999999999999999999999999 999999988777776665544333  333578


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +..+.+++.+||+.||++|||+.++++|.+-
T Consensus       261 ~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~  291 (327)
T 3lm5_A          261 SQLATDFIQSLLVKNPEKRPTAEICLSHSWL  291 (327)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHTTCGGG
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhCCHhh
Confidence            9999999999999999999999999988654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=2.4e-33  Score=236.42  Aligned_cols=178  Identities=19%  Similarity=0.294  Sum_probs=135.5

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhC--------CcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVN--------NICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~--------~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      |.+||++.++|.+.+...      ...++.+++.||+|||++        +|+||||||+|  |+++.++.+||+|||++
T Consensus       112 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~N--ill~~~~~~kl~Dfg~a  189 (337)
T 3mdy_A          112 LITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKN--ILVKKNGTCCIADLGLA  189 (337)
T ss_dssp             EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGG--EEECTTSCEEECCCTTC
T ss_pred             EEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHH--EEECCCCCEEEEeCCCc
Confidence            468999888888876432      234567788999999999        99999999999  99999999999999999


Q ss_pred             cccCCCcee---ecCCCCcCcccCCCcccCCCCCCch------hHHHHHHHHHHHHHhCC----------CCCCCCCC--
Q psy2787          67 RYSQNDCYV---MTERKPLPCPWCPMESLKHNQFSQA------SDAWMFGVTIWEMFTFG----------AEPWVGLN--  125 (251)
Q Consensus        67 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~------~Di~S~G~il~el~~~g----------~~pf~~~~--  125 (251)
                      +........   ......||+.|+|||++.+...+..      +|||||||++|||++ |          ..||....  
T Consensus       190 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~t-g~~~~~~~~~~~~p~~~~~~~  268 (337)
T 3mdy_A          190 VKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVAR-RCVSGGIVEEYQLPYHDLVPS  268 (337)
T ss_dssp             EECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHT-TBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHh-ccCcccccccccccHhhhcCC
Confidence            875433211   2235578999999999987665544      999999999999999 9          77775432  


Q ss_pred             ---hhHHHHHHHhcCCCCCCC-----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         126 ---GMQILQKIDREGERLPRP-----EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       126 ---~~~~~~~i~~~~~~~~~~-----~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                         .......+.........+     ..++.++.+++.+||+.||++|||+.+++++|+.+...
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          269 DPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence               123333333333333333     25677899999999999999999999999999987654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.98  E-value=1.7e-32  Score=229.58  Aligned_cols=178  Identities=16%  Similarity=0.200  Sum_probs=137.1

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++ ++.+||+|||++......
T Consensus       106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~N--Il~~-~~~~~l~Dfg~~~~~~~~  182 (319)
T 2y4i_B          106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKN--VFYD-NGKVVITDFGLFSISGVL  182 (319)
T ss_dssp             EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTT--EEEC---CCEECCCSCCC-----
T ss_pred             EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhh--EEEe-CCCEEEeecCCccccccc
Confidence            3578999899988776532        1245677899999999999999999999  8887 689999999998764221


Q ss_pred             c----eeecCCCCcCcccCCCcccCC---------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC
Q psy2787          73 C----YVMTERKPLPCPWCPMESLKH---------NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER  139 (251)
Q Consensus        73 ~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~  139 (251)
                      .    ........++..|+|||++.+         ..++.++||||||+++|+|++ |..||.+.........+......
T Consensus       183 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~~~~~  261 (319)
T 2y4i_B          183 QAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA-REWPFKTQPAEAIIWQMGTGMKP  261 (319)
T ss_dssp             -----CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHH-SSCSSSSCCHHHHHHHHHTTCCC
T ss_pred             cccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHhccCCCC
Confidence            1    112234568889999999874         347899999999999999999 99999988877777766544333


Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         140 LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       140 ~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ...+..++.++.+++.+||+.||++|||+.++++.|+.+....
T Consensus       262 ~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~  304 (319)
T 2y4i_B          262 NLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN  304 (319)
T ss_dssp             CCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred             CCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence            3334568889999999999999999999999999999887654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.98  E-value=4.4e-33  Score=236.72  Aligned_cols=172  Identities=13%  Similarity=0.221  Sum_probs=130.5

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc---CCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS---SSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~---~~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+....       ..++.|++.||+|||++||+||||||+|  |+++.   ++.+||+|||+++...
T Consensus       125 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~N--Ill~~~~~~~~~kl~Dfg~a~~~~  202 (349)
T 2w4o_A          125 LVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPEN--LLYATPAPDAPLKIADFGLSKIVE  202 (349)
T ss_dssp             EEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEESSSSTTCCEEECCCC------
T ss_pred             EEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCccc--EEEecCCCCCCEEEccCccccccC
Confidence            4689999999988765432       2345678899999999999999999999  99975   8899999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhH-HHHHHHhcCCCCC--CCCCCc
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ-ILQKIDREGERLP--RPEACP  147 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~-~~~~i~~~~~~~~--~~~~~~  147 (251)
                      ...  ......||+.|+|||++.+..++.++|||||||++|||++ |..||.+....+ ....+........  ....++
T Consensus       203 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  279 (349)
T 2w4o_A          203 HQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC-GFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS  279 (349)
T ss_dssp             ------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSC
T ss_pred             ccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHh-CCCCCCCCcccHHHHHHHHhCCCccCCchhhhCC
Confidence            332  2334578999999999999889999999999999999999 999998765544 5555544433332  235689


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .++.+++.+||..||++|||+.++++|.+-
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~  309 (349)
T 2w4o_A          280 LNAKDLVRKLIVLDPKKRLTTFQALQHPWV  309 (349)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence            999999999999999999999999998654

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.98  E-value=4.1e-33  Score=231.63  Aligned_cols=176  Identities=28%  Similarity=0.484  Sum_probs=141.1

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++......
T Consensus       102 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~N--il~~~~~~~kl~Dfg~~~~~~~~  179 (302)
T 4e5w_A          102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARN--VLVESEHQVKIGDFGLTKAIETD  179 (302)
T ss_dssp             EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEEETTEEEECCCTTCEECCTT
T ss_pred             EEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchhe--EEEcCCCCEEECcccccccccCC
Confidence            3578888888887663221        2345678899999999999999999999  99999999999999999875443


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--------------ChhHHHHHHHhc
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL--------------NGMQILQKIDRE  136 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~--------------~~~~~~~~i~~~  136 (251)
                      .  ........+|..|+|||++.+..++.++||||+|+++|+|++ |..|+...              ............
T Consensus       180 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (302)
T 4e5w_A          180 KEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-YCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE  258 (302)
T ss_dssp             CCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT-TTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHT
T ss_pred             CcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHH-ccCCCcchhhHHhhccCCcccccCHHHHHHHHhc
Confidence            3  233455678888999999998888999999999999999999 98875321              112222223345


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +...+.+..++.++.+++.+||+.||++|||+.++++.|+.+.
T Consensus       259 ~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          259 GKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence            6667777889999999999999999999999999999998764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.98  E-value=1.1e-33  Score=236.63  Aligned_cols=173  Identities=16%  Similarity=0.229  Sum_probs=132.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        93 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N--il~~~~~~~kl~Dfg~a~~~~~~~  170 (311)
T 3ork_A           93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN--IMISATNAVKVMDFGIARAIADSG  170 (311)
T ss_dssp             EEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEEETTSCEEECCCSCC-------
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHH--EEEcCCCCEEEeeccCcccccccc
Confidence            367899888887765422       23456788899999999999999999999  999999999999999998754332


Q ss_pred             e--eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCcHH
Q psy2787          74 Y--VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACPVE  149 (251)
Q Consensus        74 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~  149 (251)
                      .  .......||+.|+|||++.+..++.++||||||+++|+|++ |..||.+....+...........++  ....++.+
T Consensus       171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (311)
T 3ork_A          171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD  249 (311)
T ss_dssp             -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHH
T ss_pred             cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHH
Confidence            1  22334568999999999999899999999999999999999 9999998887776665544443332  13568999


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+++.+||+.||++||++.+++.+-.
T Consensus       250 l~~li~~~l~~dP~~R~~~~~~l~~~l  276 (311)
T 3ork_A          250 LDAVVLKALAKNPENRYQTAAEMRADL  276 (311)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHH
T ss_pred             HHHHHHHHHhcCHhhChhhHHHHHHHH
Confidence            999999999999999998877776543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.98  E-value=5.3e-33  Score=245.97  Aligned_cols=171  Identities=15%  Similarity=0.259  Sum_probs=140.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc---cCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF---SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~---~~~~~kl~DFGla~~~~   70 (251)
                      +.+||+..++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++   .++.+||+|||+++...
T Consensus        98 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~N--il~~~~~~~~~~kl~Dfg~a~~~~  175 (486)
T 3mwu_A           98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPEN--ILLESKEKDCDIKIIDFGLSTCFQ  175 (486)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEESSSSTTCCEEECSCSCTTTBC
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHH--EEEecCCCCCCEEEEECCcCeECC
Confidence            357899888887755321       23457788899999999999999999999  9994   45679999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      ...  ......||+.|+|||++.+ .++.++||||+||++|+|++ |..||.+.+..++...+.......+.+  ..++.
T Consensus       176 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  251 (486)
T 3mwu_A          176 QNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD  251 (486)
T ss_dssp             CC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCH
T ss_pred             CCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCH
Confidence            432  2344578999999999986 58999999999999999999 999999998888888886665554433  46889


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+++.+||..||++|||+.++++|.+-
T Consensus       252 ~~~~li~~~L~~dp~~R~t~~~~l~hp~~  280 (486)
T 3mwu_A          252 DAKDLIRKMLTFHPSLRITATQCLEHPWI  280 (486)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHCHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCHhh
Confidence            99999999999999999999999998653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.98  E-value=6.8e-33  Score=232.44  Aligned_cols=172  Identities=16%  Similarity=0.153  Sum_probs=133.2

Q ss_pred             CcccccchhHHHHHhcCC-------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      +.+||++ ++|.+.+...             ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++
T Consensus        80 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~N--Il~~~~~~~kl~Dfg~~~  156 (317)
T 2pmi_A           80 LVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQN--LLINKRGQLKLGDFGLAR  156 (317)
T ss_dssp             EEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCSSCE
T ss_pred             EEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHH--eEEcCCCCEEECcCccce
Confidence            3578887 4666644321             11234488899999999999999999999  999999999999999998


Q ss_pred             ccCCCceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC------
Q psy2787          68 YSQNDCYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL------  140 (251)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~------  140 (251)
                      ....... ......+|+.|+|||++.+. .++.++||||+||++|+|++ |..||.+.+..+....+......+      
T Consensus       157 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          157 AFGIPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMIT-GKPLFPGTNDEEQLKLIFDIMGTPNESLWP  234 (317)
T ss_dssp             ETTSCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCSCCTTTCG
T ss_pred             ecCCCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhHhh
Confidence            7543321 23345778999999998764 58999999999999999999 999999887766665553210000      


Q ss_pred             --------------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         141 --------------------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       141 --------------------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                                ..+..++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f  297 (317)
T 2pmi_A          235 SVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF  297 (317)
T ss_dssp             GGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred             hhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhh
Confidence                                      0113578899999999999999999999999988553

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.98  E-value=3.3e-33  Score=245.89  Aligned_cols=171  Identities=15%  Similarity=0.152  Sum_probs=128.9

Q ss_pred             CcccccchhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           1 MSANFAELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      |.+||++.+ +.+.....     ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......  
T Consensus       144 lv~E~~~~~-l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~N--Ill~~~~~~kl~DFG~a~~~~~~~--  218 (464)
T 3ttj_A          144 LVMELMDAN-LCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN--IVVKSDCTLKILDFGLARTAGTSF--  218 (464)
T ss_dssp             EEEECCSEE-HHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTSCEEECCCCCC-----CC--
T ss_pred             EEEeCCCCC-HHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHh--EEEeCCCCEEEEEEEeeeecCCCc--
Confidence            357888765 44433322     23467788999999999999999999999  999999999999999998754432  


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC---------------
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL---------------  140 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~---------------  140 (251)
                      ......+|+.|+|||++.+..++.++||||+||++|||++ |+.||.+.+..+....+......+               
T Consensus       219 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~-g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~  297 (464)
T 3ttj_A          219 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNY  297 (464)
T ss_dssp             CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHH
T ss_pred             ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhH
Confidence            2344678999999999999999999999999999999999 999999988766655553311110               


Q ss_pred             -----CC---------CCC-----------CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         141 -----PR---------PEA-----------CPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       141 -----~~---------~~~-----------~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                           ..         +..           .+.++.+|+.+||..||++|||+.++++|.+-
T Consensus       298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~  359 (464)
T 3ttj_A          298 VENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI  359 (464)
T ss_dssp             HTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred             hhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhh
Confidence                 00         000           15678999999999999999999999998764

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.98  E-value=7.1e-33  Score=232.57  Aligned_cols=172  Identities=12%  Similarity=0.168  Sum_probs=142.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC----ceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS----SSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~----~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++    .+||+|||++...
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~N--Il~~~~~~~~~~~kl~Dfg~~~~~  169 (321)
T 2a2a_A           92 LILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPEN--IMLLDKNIPIPHIKLIDFGLAHEI  169 (321)
T ss_dssp             EEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEESCTTSSSCCEEECCCTTCEEC
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHH--EEEecCCCCcCCEEEccCccceec
Confidence            367899888888876532       23456778899999999999999999999  9998887    7999999999875


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCc
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACP  147 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~  147 (251)
                      ....  ......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.+....+....+.......+.  ...++
T Consensus       170 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  246 (321)
T 2a2a_A          170 EDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANITSVSYDFDEEFFSHTS  246 (321)
T ss_dssp             CTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCC
T ss_pred             Cccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhcccccChhhhcccC
Confidence            5432  2344568899999999998899999999999999999999 99999998887777776544332221  25688


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ..+.+++.+||..||++|||+.++++|.+-
T Consensus       247 ~~~~~li~~~l~~dp~~Rps~~e~l~hp~~  276 (321)
T 2a2a_A          247 ELAKDFIRKLLVKETRKRLTIQEALRHPWI  276 (321)
T ss_dssp             HHHHHHHHTTSCSSTTTSCCHHHHHHSTTT
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence            999999999999999999999999998764

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.98  E-value=6.2e-34  Score=239.25  Aligned_cols=175  Identities=17%  Similarity=0.194  Sum_probs=134.3

Q ss_pred             CcccccchhHHHHHhcCCC-----------CCCCchhhHHhhhhhhC---CcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEPC-----------RKPLPPERRGYGTFSVN---NICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------~~~~~~~~~gl~~lH~~---~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      +.+||++.++|.+.+....           ..++.+++.||+|||++   ||+||||||+|  |+++.++.+||+|||++
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~N--il~~~~~~~kl~Dfg~~  181 (326)
T 3uim_A          104 LVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN--ILLDEEFEAVVGDFGLA  181 (326)
T ss_dssp             EEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGG--EEECTTCCEEECCCSSC
T ss_pred             EEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhh--EEECCCCCEEeccCccc
Confidence            3578998888888765432           12456778999999999   99999999999  99999999999999999


Q ss_pred             cccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-----ChhHHHHHHHh---cC-
Q psy2787          67 RYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL-----NGMQILQKIDR---EG-  137 (251)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~-----~~~~~~~~i~~---~~-  137 (251)
                      +..............||+.|+|||++.+..++.++||||+|+++|+|++ |..||...     ........+..   .. 
T Consensus       182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  260 (326)
T 3uim_A          182 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKK  260 (326)
T ss_dssp             EECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHH-CCCSBCHHHHTTTSCSBHHHHHTTTTSSCC
T ss_pred             cccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHh-CCCcccccccccccchhHHHHHHHHhhchh
Confidence            8765444444555678999999999988889999999999999999999 99999521     11111111110   00 


Q ss_pred             --------CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         138 --------ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       138 --------~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                              .....+...+..+.+++.+||+.||++|||+.+++++|+..
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          261 LEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             STTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             hhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence                    00111122446799999999999999999999999999863

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.98  E-value=6e-33  Score=242.02  Aligned_cols=171  Identities=16%  Similarity=0.131  Sum_probs=133.6

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc--eEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS--SSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~--~kl~DFGla~~~   69 (251)
                      |.+||+. ++|.+.+....         ..++.|++.||+|||+++|+||||||+|  |+++.++.  +||+|||+++..
T Consensus       176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~N--ILl~~~~~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPEN--ILLKQQGRSGIKVIDFGSSCYE  252 (429)
T ss_dssp             EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGG--EEESSTTSCCEEECCCTTCEET
T ss_pred             EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--eEEccCCCcceEEeecccceec
Confidence            3567776 46666544322         2356788899999999999999999999  99999887  999999999765


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--------
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--------  141 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--------  141 (251)
                      ...    .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+......++        
T Consensus       253 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-G~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~  327 (429)
T 3kvw_A          253 HQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLT-GYPLLPGEDEGDQLACMIELLGMPSQKLLDASK  327 (429)
T ss_dssp             TCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBT
T ss_pred             CCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhh
Confidence            433    234577889999999999899999999999999999999 9999998877665554432100000        


Q ss_pred             -------------------------------------------------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy2787         142 -------------------------------------------------RPEACPVEVYALMRQCWSKNPAERPKFSTLK  172 (251)
Q Consensus       142 -------------------------------------------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il  172 (251)
                                                                       .+...++.+.+|+.+||+.||++|||+.+++
T Consensus       328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L  407 (429)
T 3kvw_A          328 RAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQAL  407 (429)
T ss_dssp             THHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             hhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHh
Confidence                                                             0123467899999999999999999999999


Q ss_pred             HHHHhhc
Q psy2787         173 DCLYRLT  179 (251)
Q Consensus       173 ~~l~~~~  179 (251)
                      +|.+-..
T Consensus       408 ~Hpw~~~  414 (429)
T 3kvw_A          408 RHPWLRR  414 (429)
T ss_dssp             TSTTTC-
T ss_pred             CChhhcc
Confidence            9877543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.98  E-value=9.3e-33  Score=227.77  Aligned_cols=169  Identities=12%  Similarity=0.149  Sum_probs=141.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++...... 
T Consensus        91 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~kl~Dfg~~~~~~~~-  167 (284)
T 2vgo_A           91 LMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN--LLMGYKGELKIADFGWSVHAPSL-  167 (284)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGG--EEECTTCCEEECCCTTCEECSSS-
T ss_pred             EEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH--EEEcCCCCEEEecccccccCccc-
Confidence            357888888887765432       22356688899999999999999999999  99999999999999999765432 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                        ......++..|+|||++.+..++.++||||+|+++|+|++ |..||.+....+....+...  ....+..++.++.++
T Consensus       168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l  242 (284)
T 2vgo_A          168 --RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLV-GMPPFDSPSHTETHRRIVNV--DLKFPPFLSDGSKDL  242 (284)
T ss_dssp             --CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTT--CCCCCTTSCHHHHHH
T ss_pred             --ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHH-CCCCCCCCCHhHHHHHHhcc--ccCCCCcCCHHHHHH
Confidence              2234578889999999999889999999999999999999 99999988877777666443  344556789999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+||+.||++|||+.++++|.+-
T Consensus       243 i~~~l~~~p~~Rps~~~ll~h~~~  266 (284)
T 2vgo_A          243 ISKLLRYHPPQRLPLKGVMEHPWV  266 (284)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTCHHH
T ss_pred             HHHHhhcCHhhCCCHHHHhhCHHH
Confidence            999999999999999999998654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.98  E-value=1.7e-32  Score=227.17  Aligned_cols=171  Identities=15%  Similarity=0.174  Sum_probs=130.0

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++. ++++.....        ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        78 lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~N--il~~~~~~~kl~Dfg~~~~~~~~  154 (292)
T 3o0g_A           78 LVFEFCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN--LLINRNGELKLANFGLARAFGIP  154 (292)
T ss_dssp             EEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECCSC
T ss_pred             EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCCEEEeecccceecCCc
Confidence            35788875 444433221        22356788899999999999999999999  99999999999999999875433


Q ss_pred             ceeecCCCCcCcccCCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCC-CCCCChhHHHHHHHhcCCCC----------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAEP-WVGLNGMQILQKIDREGERL----------  140 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~S~G~il~el~~~g~~p-f~~~~~~~~~~~i~~~~~~~----------  140 (251)
                      . .......+|..|+|||++.+.. ++.++||||+||++|+|++ |..| |.+.+..+....+......+          
T Consensus       155 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  232 (292)
T 3o0g_A          155 V-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN-AGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTK  232 (292)
T ss_dssp             C-SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTT-TSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGG
T ss_pred             c-ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHH-cCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcc
Confidence            2 2234457789999999998765 7999999999999999999 6666 66666555555543310000          


Q ss_pred             -----------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         141 -----------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       141 -----------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                       ...+.++.++.+++.+||+.||++|||+.++++|-+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~  285 (292)
T 3o0g_A          233 LPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY  285 (292)
T ss_dssp             STTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             cccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcc
Confidence                             112357889999999999999999999999998865

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.98  E-value=1.3e-33  Score=237.78  Aligned_cols=173  Identities=16%  Similarity=0.274  Sum_probs=118.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC---ceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS---SSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~---~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++   .+||+|||+++...
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N--Ill~~~~~~~~~kl~Dfg~a~~~~  160 (325)
T 3kn6_A           83 LVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN--LLFTDENDNLEIKIIDFGFARLKP  160 (325)
T ss_dssp             EEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEEEC----CEEEECCCTTCEECC
T ss_pred             EEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHH--EEEecCCCcccEEEeccccceecC
Confidence            468999888888866542       22356778899999999999999999999  8887655   89999999998654


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-------hhHHHHHHHhcCCCCCCC
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN-------GMQILQKIDREGERLPRP  143 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~-------~~~~~~~i~~~~~~~~~~  143 (251)
                      ... .......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.+..       ..++...+.......+.+
T Consensus       161 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  238 (325)
T 3kn6_A          161 PDN-QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS-GQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGE  238 (325)
T ss_dssp             C-----------------------CCCCHHHHHHHHHHHHHHHHH-SSCTTC-------CCCHHHHHHHHTTTCCCCCSH
T ss_pred             CCC-CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHh-CCCCCCCCccccccccHHHHHHHHHcCCCCCCcc
Confidence            332 12344567899999999999999999999999999999999 999997643       245555554333322211


Q ss_pred             --CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         144 --EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       144 --~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                        ..++.++.+++.+||..||++|||+.++++|.+-
T Consensus       239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~  274 (325)
T 3kn6_A          239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL  274 (325)
T ss_dssp             HHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGG
T ss_pred             cccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhh
Confidence              3588999999999999999999999999987654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.98  E-value=3.8e-33  Score=237.13  Aligned_cols=178  Identities=11%  Similarity=0.051  Sum_probs=137.2

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC--ceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS--SSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~--~~kl~DFGla~~~   69 (251)
                      +.+||+ .++|.+.+...         ...++.|++.||+|||++||+||||||+|  |+++.++  .+||+|||+++..
T Consensus       135 lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~N--Il~~~~~~~~~kl~Dfg~a~~~  211 (352)
T 2jii_A          135 LVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAEN--IFVDPEDQSQVTLAGYGFAFRY  211 (352)
T ss_dssp             EEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGG--EEEETTEEEEEEECCGGGCBCS
T ss_pred             EEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHH--EEEcCCCCceEEEecCcceeec
Confidence            357888 77777765532         23356778899999999999999999999  9999888  8999999999875


Q ss_pred             CCCcee------ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--hhHHHHHH---HhcCC
Q psy2787          70 QNDCYV------MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN--GMQILQKI---DREGE  138 (251)
Q Consensus        70 ~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~--~~~~~~~i---~~~~~  138 (251)
                      ......      ......+|+.|+|||++.+..++.++||||||+++|+|++ |..||.+..  ...+....   .....
T Consensus       212 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  290 (352)
T 2jii_A          212 CPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLY-GFLPWTNCLPNTEDIMKQKQKFVDKPG  290 (352)
T ss_dssp             SGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SCCTTGGGTTCHHHHHHHHHHHHHSCC
T ss_pred             cCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHh-CCCCcccCCcCHHHHHHHHHhccCChh
Confidence            432211      1234578999999999999899999999999999999999 999998753  22222222   11111


Q ss_pred             CCCC----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         139 RLPR----PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       139 ~~~~----~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ....    ...++.++.+++.+||+.||++|||+.++++.|..+....
T Consensus       291 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~  338 (352)
T 2jii_A          291 PFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDL  338 (352)
T ss_dssp             CEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             hhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhc
Confidence            1111    1256899999999999999999999999999998876554

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.98  E-value=1.1e-32  Score=227.93  Aligned_cols=171  Identities=13%  Similarity=0.119  Sum_probs=129.0

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++. ++.+.+...        ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~  154 (288)
T 1ob3_A           78 VFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN--LLINREGELKIADFGLARAFGIPV  154 (288)
T ss_dssp             EEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTSCEEECCTTHHHHHCC--
T ss_pred             EEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEEcCCCCEEEeECccccccCccc
Confidence            5677764 565554432        12346688899999999999999999999  999999999999999998754322


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL------------  140 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~------------  140 (251)
                      . ......+|+.|+|||++.+. .++.++||||+||++|+|++ |..||.+.+..+....+......+            
T Consensus       155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T 1ob3_A          155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELP  232 (288)
T ss_dssp             --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccc
Confidence            1 22345678899999998764 58999999999999999999 999999887666555443210000            


Q ss_pred             ---------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         141 ---------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       141 ---------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                     .....++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f  284 (288)
T 1ob3_A          233 KYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYF  284 (288)
T ss_dssp             TCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             ccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence                           0113578899999999999999999999999987653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.98  E-value=3.1e-33  Score=234.51  Aligned_cols=180  Identities=26%  Similarity=0.479  Sum_probs=144.9

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc-
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC-   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~-   73 (251)
                      +.+||++.++|.+.+...      ...++.+++.||+|||++||+||||||+|  |+++.++.+||+|||++....... 
T Consensus       112 lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~N--il~~~~~~~kl~Dfg~a~~~~~~~~  189 (318)
T 3lxp_A          112 LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARN--VLLDNDRLVKIGDFGLAKAVPEGHE  189 (318)
T ss_dssp             EEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCCEEECCGGGCEECCTTCS
T ss_pred             EEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchhe--EEEcCCCCEEECCcccccccccccc
Confidence            358999999998877543      22356678899999999999999999999  999999999999999998754432 


Q ss_pred             -eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh--------------HHHHHHHhcCC
Q psy2787          74 -YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM--------------QILQKIDREGE  138 (251)
Q Consensus        74 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~--------------~~~~~i~~~~~  138 (251)
                       ........+|..|+|||++.+..++.++||||+|+++|+|++ |..||......              .........+.
T Consensus       190 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (318)
T 3lxp_A          190 YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT-HCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGE  268 (318)
T ss_dssp             EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT-TTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTC
T ss_pred             ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHh-CCCcccccchhhhhhhcccccchhHHHHHHHHhccc
Confidence             223345567888999999998888999999999999999999 99999653211              11122234566


Q ss_pred             CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         139 RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       139 ~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      ..+.+..++.++.+++.+||+.||++|||+.++++.|+.+.....
T Consensus       269 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~  313 (318)
T 3lxp_A          269 RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQ  313 (318)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhc
Confidence            667778899999999999999999999999999999998876654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.98  E-value=5.2e-33  Score=231.54  Aligned_cols=171  Identities=15%  Similarity=0.206  Sum_probs=140.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEE---ccCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILF---FSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~---~~~~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |++   +.++.+||+|||++....
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~N--Il~~~~~~~~~~kl~Dfg~~~~~~  160 (304)
T 2jam_A           83 LVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPEN--LLYLTPEENSKIMITDFGLSKMEQ  160 (304)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGG--CEESSSSTTCCEEBCSCSTTCCCC
T ss_pred             EEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHH--EEEecCCCCCCEEEccCCcceecC
Confidence            357888888887755321       22356678899999999999999999999  888   778899999999997643


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~  148 (251)
                      ..   ......+++.|+|||++.+..++.++||||+|+++|+|++ |..||.+.....+...+.......+  ....++.
T Consensus       161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  236 (304)
T 2jam_A          161 NG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC-GYPPFYEETESKLFEKIKEGYYEFESPFWDDISE  236 (304)
T ss_dssp             CB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCH
T ss_pred             CC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHcCCCCCCccccccCCH
Confidence            32   1122357888999999999899999999999999999999 9999998888777777765544332  3367899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+++.+||..||++|||+.++++|.+-
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~  265 (304)
T 2jam_A          237 SAKDFICHLLEKDPNERYTCEKALSHPWI  265 (304)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcCccc
Confidence            99999999999999999999999998664

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.98  E-value=3e-33  Score=235.40  Aligned_cols=180  Identities=29%  Similarity=0.476  Sum_probs=141.4

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...        ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~N--Il~~~~~~~kl~Dfg~~~~~~~~  180 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARN--ILVESEAHVKIADFGLAKLLPLD  180 (327)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEEETTEEEECCGGGCEECCTT
T ss_pred             EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhh--EEECCCCCEEEcccccceecccC
Confidence            357888777777655421        23456688899999999999999999999  99999999999999999875433


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh--------------HHHHHHHhc
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM--------------QILQKIDRE  136 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~--------------~~~~~i~~~  136 (251)
                      .  ........+|..|+|||++.+..++.++||||+|+++|+|++ |..||......              .........
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (327)
T 3lxl_A          181 KDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT-YCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE  259 (327)
T ss_dssp             CSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHT-TTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred             CccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHh-CCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence            2  223445668888999999998888999999999999999999 99998543221              112222345


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      +...+.+..++.++.+++.+||+.||++|||+.+++++|+.+.....
T Consensus       260 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~  306 (327)
T 3lxl_A          260 GQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR  306 (327)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred             ccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence            66667778899999999999999999999999999999998865543

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.98  E-value=1.4e-33  Score=233.00  Aligned_cols=174  Identities=20%  Similarity=0.342  Sum_probs=134.0

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc--------eEEccCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS--------SSSGDFG   64 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~--------~kl~DFG   64 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||+++|+||||||+|  |+++.++.        +||+|||
T Consensus        89 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N--Ill~~~~~~~~~~~~~~kl~Dfg  166 (289)
T 4fvq_A           89 LVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKN--ILLIREEDRKTGNPPFIKLSDPG  166 (289)
T ss_dssp             EEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEEEECCBGGGTBCCEEEECCCC
T ss_pred             EEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcce--EEEecCCcccccccceeeeccCc
Confidence            4678998888887665432        2346688899999999999999999999  99988886        9999999


Q ss_pred             CCcccCCCceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC
Q psy2787          65 MMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP  143 (251)
Q Consensus        65 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  143 (251)
                      ++.......     ...++..|+|||++.+ ..++.++||||+|+++|+|+++|..||............ ..  ....+
T Consensus       167 ~~~~~~~~~-----~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~-~~--~~~~~  238 (289)
T 4fvq_A          167 ISITVLPKD-----ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY-ED--RHQLP  238 (289)
T ss_dssp             SCTTTSCHH-----HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-HT--TCCCC
T ss_pred             ccccccCcc-----ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh-hc--cCCCC
Confidence            987644321     2346778999999987 668999999999999999999445566555544444333 22  33334


Q ss_pred             CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHHH
Q psy2787         144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMK  184 (251)
Q Consensus       144 ~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~~  184 (251)
                      ...+.++.+++.+||+.||++|||+.+++++|..+..+...
T Consensus       239 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~  279 (289)
T 4fvq_A          239 APKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV  279 (289)
T ss_dssp             CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred             CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence            55677899999999999999999999999999999876543

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=2.3e-33  Score=238.97  Aligned_cols=174  Identities=16%  Similarity=0.202  Sum_probs=137.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus       136 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~~kl~DfG~a~~~~~~~  213 (355)
T 1vzo_A          136 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLEN--ILLDSNGHVVLTDFGLSKEFVADE  213 (355)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTSCEEESCSSEEEECCGGG
T ss_pred             EEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEECCCCcEEEeeCCCCeecccCC
Confidence            468999888888765432       22345688899999999999999999999  999999999999999998754433


Q ss_pred             eeecCCCCcCcccCCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCC----hhHHHHHHHhcCCCCCCCCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN--QFSQASDAWMFGVTIWEMFTFGAEPWVGLN----GMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~S~G~il~el~~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ........||+.|+|||++.+.  .++.++|||||||++|||++ |..||....    ...+...+...  .++.+..++
T Consensus       214 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  290 (355)
T 1vzo_A          214 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPFTVDGEKNSQAEISRRILKS--EPPYPQEMS  290 (355)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH-SSCTTSCTTSCCCHHHHHHHHHHC--CCCCCTTSC
T ss_pred             CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHH-CCCCCccCCccchHHHHHHHHhcc--CCCCCcccC
Confidence            3334456789999999999863  47889999999999999999 999996532    23444444332  344567789


Q ss_pred             HHHHHHHHHHhccCCCCCC-----CHHHHHHHHHhhc
Q psy2787         148 VEVYALMRQCWSKNPAERP-----KFSTLKDCLYRLT  179 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rp-----s~~~il~~l~~~~  179 (251)
                      ..+.+++.+||..||++||     ++.++++|.+...
T Consensus       291 ~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence            9999999999999999999     9999999887543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.98  E-value=1.6e-32  Score=243.46  Aligned_cols=172  Identities=15%  Similarity=0.229  Sum_probs=142.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC---CceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS---SSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~---~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++..   +.+||+|||+++...
T Consensus       113 lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N--il~~~~~~~~~~kl~DfG~a~~~~  190 (494)
T 3lij_A          113 LVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPEN--LLLESKEKDALIKIVDFGLSAVFE  190 (494)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEESCSSTTCCEEECCCTTCEECB
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhh--EEEeCCCCCCcEEEEECCCCeECC
Confidence            468999998888755432       23457788899999999999999999999  888664   469999999998765


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      ...  ......||+.|+|||++. ..++.++||||+||++|+|++ |..||.+.+..++...+.......+.+  ..++.
T Consensus       191 ~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  266 (494)
T 3lij_A          191 NQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLA-GYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE  266 (494)
T ss_dssp             TTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCH
T ss_pred             CCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCH
Confidence            442  234567899999999987 468999999999999999999 999999999888888887665554433  56899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.+++.+||+.||++|||+.++++|.+-.
T Consensus       267 ~~~~li~~~L~~dp~~R~s~~e~l~hp~~~  296 (494)
T 3lij_A          267 GAKDLIKQMLQFDSQRRISAQQALEHPWIK  296 (494)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             HHHHHHHHHCCCChhhCccHHHHhcCcccc
Confidence            999999999999999999999999986643

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.98  E-value=6.9e-33  Score=228.94  Aligned_cols=170  Identities=17%  Similarity=0.257  Sum_probs=132.2

Q ss_pred             CcccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEE---ccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILF---FSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~---~~~~~~kl~DFGla   66 (251)
                      +.+||++.++|.+.+...           ...++.|++.||+|||++||+||||||+|  |++   +.++.+||+|||++
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~N--Il~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A           97 IVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPEN--ILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             EEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG--EEESSSSTTCCEEECCCCCC
T ss_pred             EEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHH--EEEecCCCCCCEEEEeeecc
Confidence            357899888887755321           22456678899999999999999999999  888   45678999999999


Q ss_pred             cccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC-CCC
Q psy2787          67 RYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR-PEA  145 (251)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~  145 (251)
                      .......  ......+|..|+|||++. ..++.++||||+|+++|+|++ |..||.+....+....+......... ...
T Consensus       175 ~~~~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  250 (285)
T 3is5_A          175 ELFKSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLT-GCLPFTGTSLEEVQQKATYKEPNYAVECRP  250 (285)
T ss_dssp             CC------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCCCCCC--CC
T ss_pred             eecCCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHh-CCCCCCCCCHHHHHhhhccCCcccccccCc
Confidence            8754332  234456889999999986 468899999999999999999 99999998877777666544433332 244


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +++++.+++.+||+.||++|||+.++++|.+
T Consensus       251 ~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~  281 (285)
T 3is5_A          251 LTPQAVDLLKQMLTKDPERRPSAAQVLHHEW  281 (285)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHHTSGG
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcCHH
Confidence            7899999999999999999999999998754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.98  E-value=7.4e-33  Score=227.47  Aligned_cols=171  Identities=15%  Similarity=0.194  Sum_probs=140.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEE---ccCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILF---FSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~---~~~~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.....       ...++.|++.||+|||++||+||||||+|  |++   +.++.+||+|||++....
T Consensus        83 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~~~~~l~Dfg~~~~~~  160 (277)
T 3f3z_A           83 LVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPEN--FLFLTDSPDSPLKLIDFGLAARFK  160 (277)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEESSSSTTCCEEECCCTTCEECC
T ss_pred             EEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHH--EEEecCCCCCcEEEEecccceecc
Confidence            357899888887754332       23456778899999999999999999999  998   778899999999998755


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      ...  ......+|+.|+|||++.+. ++.++||||+|+++|+|++ |..||.+....+....+.......+..  ..+++
T Consensus       161 ~~~--~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (277)
T 3f3z_A          161 PGK--MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLC-GYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSP  236 (277)
T ss_dssp             TTS--CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCH
T ss_pred             Ccc--chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCH
Confidence            432  23445788899999998764 8999999999999999999 999999988888777776554433322  36889


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+++.+||+.||++|||+.++++|.+-
T Consensus       237 ~~~~li~~~l~~dp~~R~s~~~~l~h~~~  265 (277)
T 3f3z_A          237 QAESLIRRLLTKSPKQRITSLQALEHEWF  265 (277)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence            99999999999999999999999987654

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.98  E-value=3.5e-33  Score=237.83  Aligned_cols=168  Identities=15%  Similarity=0.155  Sum_probs=131.2

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-----------------
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-----------------   54 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-----------------   54 (251)
                      +.+||+ .++|.+.+....         ..++.|++.||+|||++||+||||||+|  |+++.                 
T Consensus       113 lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N--Ill~~~~~~~~~~~~~~~~~~~  189 (360)
T 3llt_A          113 LIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPEN--ILLDDPYFEKSLITVRRVTDGK  189 (360)
T ss_dssp             EEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEESCTTCCEEEEEEECTTTCC
T ss_pred             EEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCccc--EEEccccccccccchhcccccc
Confidence            356787 677777654332         2246678899999999999999999999  88865                 


Q ss_pred             --------CCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh
Q psy2787          55 --------SSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG  126 (251)
Q Consensus        55 --------~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~  126 (251)
                              ++.+||+|||+++.....    .....+|+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+.
T Consensus       190 ~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~  264 (360)
T 3llt_A          190 KIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT-GSLLFRTHEH  264 (360)
T ss_dssp             EEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCSCCCSSH
T ss_pred             cccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHH-CCCCCCCCcH
Confidence                    789999999999874432    234578899999999999999999999999999999999 9999998776


Q ss_pred             hHHHHHHHhcCCCCC------------------------CC--------------------CCCcHHHHHHHHHHhccCC
Q psy2787         127 MQILQKIDREGERLP------------------------RP--------------------EACPVEVYALMRQCWSKNP  162 (251)
Q Consensus       127 ~~~~~~i~~~~~~~~------------------------~~--------------------~~~~~~~~~li~~cl~~dP  162 (251)
                      .+....+.......+                        .+                    ...++.+.+++.+||+.||
T Consensus       265 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP  344 (360)
T 3llt_A          265 MEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDP  344 (360)
T ss_dssp             HHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSG
T ss_pred             HHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCCh
Confidence            665555433211111                        00                    0123678899999999999


Q ss_pred             CCCCCHHHHHHHHH
Q psy2787         163 AERPKFSTLKDCLY  176 (251)
Q Consensus       163 ~~Rps~~~il~~l~  176 (251)
                      ++|||+.++++|.+
T Consensus       345 ~~Rpta~elL~hp~  358 (360)
T 3llt_A          345 TLRPSPAELLKHKF  358 (360)
T ss_dssp             GGSCCHHHHTTSGG
T ss_pred             hhCCCHHHHhcCcc
Confidence            99999999998754

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.97  E-value=8.4e-33  Score=230.07  Aligned_cols=173  Identities=16%  Similarity=0.229  Sum_probs=144.1

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      +.+||++.++|.+.....      ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++........
T Consensus        97 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~kl~Dfg~~~~~~~~~~  174 (303)
T 3a7i_A           97 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAAN--VLLSEHGEVKLADFGVAGQLTDTQI  174 (303)
T ss_dssp             EEEECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECBTTBC
T ss_pred             EEEEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhe--EEECCCCCEEEeecccceecCcccc
Confidence            367899888888876532      22346677899999999999999999999  9999999999999999987554322


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALM  154 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li  154 (251)
                       ......++..|+|||++.+..++.++||||||+++|+|++ |..||...........+. .......+..++..+.+++
T Consensus       175 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li  251 (303)
T 3a7i_A          175 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAR-GEPPHSELHPMKVLFLIP-KNNPPTLEGNYSKPLKEFV  251 (303)
T ss_dssp             -CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHH-HSCCCCCCSSCCHHHHHHH
T ss_pred             -ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHcc-CCCCCCCcCHHHHHHHhh-cCCCCCCccccCHHHHHHH
Confidence             2345578889999999999889999999999999999999 999999887776666554 3444555678899999999


Q ss_pred             HHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         155 RQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       155 ~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+||..||++|||+.+++++.+..
T Consensus       252 ~~~l~~dp~~Rps~~~ll~~~~~~  275 (303)
T 3a7i_A          252 EACLNKEPSFRPTAKELLKHKFIL  275 (303)
T ss_dssp             HHHCCSSGGGSCCHHHHTTCHHHH
T ss_pred             HHHcCCChhhCcCHHHHhhChhhh
Confidence            999999999999999999987653

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.97  E-value=8.2e-33  Score=231.09  Aligned_cols=179  Identities=12%  Similarity=0.118  Sum_probs=130.6

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++........
T Consensus       112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~N--Il~~~~~~~kl~Dfg~~~~~~~~~~  189 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPEN--ILVSADDFAYLVDFGIASATTDEKL  189 (309)
T ss_dssp             EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTSCEEECSCCC---------
T ss_pred             EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHH--EEEcCCCCEEEecCccCcccccccc
Confidence            57888877777765432       22456778899999999999999999999  9999999999999999987655433


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-CCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-PRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~l  153 (251)
                      .......++..|+|||++.+..++.++||||||+++|+|++ |..||.+.....+...+......+ ..+..++.++.++
T Consensus       190 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  268 (309)
T 2h34_A          190 TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLT-GSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDAV  268 (309)
T ss_dssp             -------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHH-SSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHHH
T ss_pred             ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHH-CCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHHH
Confidence            34445678899999999998889999999999999999999 999998876655444443222211 2346789999999


Q ss_pred             HHHHhccCCCCCC-CHHHHHHHHHhhcHHHH
Q psy2787         154 MRQCWSKNPAERP-KFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       154 i~~cl~~dP~~Rp-s~~~il~~l~~~~~~~~  183 (251)
                      +.+||+.||++|| +++++++.|........
T Consensus       269 i~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          269 IARGMAKNPEDRYVTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             HHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred             HHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence            9999999999999 99999999988765543

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.97  E-value=1.6e-32  Score=242.29  Aligned_cols=177  Identities=14%  Similarity=0.159  Sum_probs=137.1

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEE---ccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILF---FSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~---~~~~~~kl~DFGla~~~   69 (251)
                      |.+||+ .++|.+.+...        ...++.|++.||+|||+++|+||||||+|  ||+   +.++.+||+|||+++..
T Consensus        80 lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~N--ILl~~~~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A           80 LVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDN--FLMGLGRRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             EEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECCGGGTTCEEECCCTTCEEC
T ss_pred             EEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcce--EEEecCCCCCeEEEEeCCcceec
Confidence            356777 66666655421        22346678899999999999999999999  999   68899999999999875


Q ss_pred             CCCce------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh---hHHHHHHHhcCCCC
Q psy2787          70 QNDCY------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG---MQILQKIDREGERL  140 (251)
Q Consensus        70 ~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~---~~~~~~i~~~~~~~  140 (251)
                      .....      .......||..|+|||++.+..++.++|||||||++|||++ |..||.+...   .+.+..+.......
T Consensus       157 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ellt-G~~Pf~~~~~~~~~~~~~~i~~~~~~~  235 (483)
T 3sv0_A          157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLR-GSLPWQGLKAGTKKQKYEKISEKKVAT  235 (483)
T ss_dssp             BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCCSSHHHHHHHHHHHHHHS
T ss_pred             cCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHh-CCCCCccccchhHHHHHHHHhhccccc
Confidence            44321      22335678999999999999999999999999999999999 9999987543   23333332221111


Q ss_pred             ---CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         141 ---PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       141 ---~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                         .....++.++.+++.+||+.+|++||++.+|++.|..+...
T Consensus       236 ~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~  279 (483)
T 3sv0_A          236 SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR  279 (483)
T ss_dssp             CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence               11256889999999999999999999999999999887543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.2e-32  Score=233.85  Aligned_cols=168  Identities=13%  Similarity=0.139  Sum_probs=132.7

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||+ .++|.+.....      ...++.|+++||+|||++||+||||||+|  |+++.++.+||+|||+++.....   
T Consensus       108 v~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~N--Ill~~~~~~kl~Dfg~a~~~~~~---  181 (367)
T 1cm8_A          108 VMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN--LAVNEDCELKILDFGLARQADSE---  181 (367)
T ss_dssp             EEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCTTCEECCSS---
T ss_pred             EEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHH--EEEcCCCCEEEEeeecccccccc---
Confidence            45666 45555544321      22356788999999999999999999999  99999999999999999875432   


Q ss_pred             ecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC--------------
Q psy2787          76 MTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL--------------  140 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~--------------  140 (251)
                       .....+|..|+|||++.+ ..++.++||||+||++|||++ |+.||.+.+..+....+......+              
T Consensus       182 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~  259 (367)
T 1cm8_A          182 -MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT-GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK  259 (367)
T ss_dssp             -CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             -cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHH
Confidence             234567889999999877 678999999999999999999 999999887666555443211110              


Q ss_pred             ---------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         141 ---------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       141 ---------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                     .....+++.+.+++.+||..||++|||+.++++|.+-
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f  311 (367)
T 1cm8_A          260 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF  311 (367)
T ss_dssp             HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHH
Confidence                           1124678899999999999999999999999998653

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.97  E-value=4.2e-33  Score=246.49  Aligned_cols=171  Identities=16%  Similarity=0.235  Sum_probs=142.8

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEE---ccCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILF---FSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~---~~~~~~kl~DFGla~~~~   70 (251)
                      +.+||+..++|.+.+....       ..++.|++.||+|||++||+||||||+|  |++   +.++.+||+|||+++...
T Consensus       103 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N--il~~~~~~~~~~kl~Dfg~a~~~~  180 (484)
T 3nyv_A          103 LVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN--LLLESKSKDANIRIIDFGLSTHFE  180 (484)
T ss_dssp             EEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEESSSSTTCCEEECCTTHHHHBC
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHH--EEEecCCCCCcEEEEeeeeeEEcc
Confidence            3679999999988765432       2356788899999999999999999999  999   567899999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      ...  ......||+.|+|||++.+ .++.++||||+||++|+|++ |..||.+.+..++...+.......+.+  ..+++
T Consensus       181 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  256 (484)
T 3nyv_A          181 ASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLS-GCPPFNGANEYDILKKVEKGKYTFELPQWKKVSE  256 (484)
T ss_dssp             CCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCH
T ss_pred             ccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCH
Confidence            432  1223468899999999876 68999999999999999999 999999999888888887665554433  56899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+++.+||+.||++|||+.++++|.+-
T Consensus       257 ~~~~li~~~L~~dp~~R~s~~e~l~h~~~  285 (484)
T 3nyv_A          257 SAKDLIRKMLTYVPSMRISARDALDHEWI  285 (484)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhhChhh
Confidence            99999999999999999999999988764

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.97  E-value=6.4e-33  Score=237.04  Aligned_cols=171  Identities=16%  Similarity=0.210  Sum_probs=140.3

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.....       ...++.|++.||.|||+.||+||||||+|  |+++.++.+||+|||++.......
T Consensus       177 lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~N--Il~~~~~~ikl~DfG~~~~~~~~~  254 (365)
T 2y7j_A          177 LVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPEN--ILLDDNMQIRLSDFGFSCHLEPGE  254 (365)
T ss_dssp             EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCCEEECCCTTCEECCTTC
T ss_pred             EEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEECCCCCEEEEecCcccccCCCc
Confidence            467899888887765432       23456788899999999999999999999  999999999999999998755432


Q ss_pred             eeecCCCCcCcccCCCcccCC------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CC
Q psy2787          74 YVMTERKPLPCPWCPMESLKH------NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EA  145 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~  145 (251)
                        ......||+.|+|||++.+      ..++.++|||||||++|+|++ |..||.+.........+.........+  ..
T Consensus       255 --~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  331 (365)
T 2y7j_A          255 --KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLA-GSPPFWHRRQILMLRMIMEGQYQFSSPEWDD  331 (365)
T ss_dssp             --CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCCCCCHHHHSS
T ss_pred             --ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhCCCCCCCccccc
Confidence              2345678999999999863      357889999999999999999 999999888777777775554443322  56


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++..+.+++.+||+.||++|||+.++++|.+
T Consensus       332 ~~~~~~~li~~~L~~dP~~Rps~~ell~hp~  362 (365)
T 2y7j_A          332 RSSTVKDLISRLLQVDPEARLTAEQALQHPF  362 (365)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence            8889999999999999999999999998754

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.97  E-value=1.3e-32  Score=236.81  Aligned_cols=174  Identities=16%  Similarity=0.186  Sum_probs=131.0

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.....
T Consensus       103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N--Ill~~~~~~kl~dfg~~~~~~~  180 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH--ILISVDGKVYLSGLRSNLSMIS  180 (389)
T ss_dssp             EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTCCEEECCGGGCEECEE
T ss_pred             EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEcCCCCEEEcccccceeecc
Confidence            3678988888887664331         2345678899999999999999999999  9999999999999999875322


Q ss_pred             Cce------eecCCCCcCcccCCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-----
Q psy2787          72 DCY------VMTERKPLPCPWCPMESLKH--NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-----  138 (251)
Q Consensus        72 ~~~------~~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-----  138 (251)
                      ...      .......+|..|+|||++.+  ..++.++||||+||++|+|++ |..||.+.+..+....+.....     
T Consensus       181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~  259 (389)
T 3gni_B          181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELAN-GHVPFKDMPATQMLLEKLNGTVPCLLD  259 (389)
T ss_dssp             TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHH-SSCTTTTCCSTTHHHHC----------
T ss_pred             ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHhcCCCCcccc
Confidence            111      11233478889999999987  578999999999999999999 9999987655443332211110     


Q ss_pred             ---------------------------------------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         139 ---------------------------------------RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       139 ---------------------------------------~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                                             ..+.+..+++++.+|+.+||+.||++|||+.++++|.+-
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f  337 (389)
T 3gni_B          260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFF  337 (389)
T ss_dssp             ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGG
T ss_pred             ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHH
Confidence                                                   011234578899999999999999999999999988543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.97  E-value=2.2e-32  Score=243.97  Aligned_cols=171  Identities=13%  Similarity=0.150  Sum_probs=139.9

Q ss_pred             CcccccchhHHHHHhcCCC-----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      |.+||++.++|...+....           ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++..
T Consensus       262 lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~N--ILl~~~g~vkL~DFGla~~~  339 (543)
T 3c4z_A          262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPEN--VLLDDDGNVRISDLGLAVEL  339 (543)
T ss_dssp             EEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTSCEEECCCTTCEEC
T ss_pred             EEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHH--EEEeCCCCEEEeecceeeec
Confidence            4689999999988765321           1235678899999999999999999999  99999999999999999875


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC----hhHHHHHHHhcCCCCCCCCC
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN----GMQILQKIDREGERLPRPEA  145 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~  145 (251)
                      ..... ......||+.|+|||++.+..++.++||||+||++|||++ |..||.+..    ..++...+...  ....+..
T Consensus       340 ~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyellt-G~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~  415 (543)
T 3c4z_A          340 KAGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIA-ARGPFRARGEKVENKELKQRVLEQ--AVTYPDK  415 (543)
T ss_dssp             CTTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTT
T ss_pred             cCCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHh-CCCCCCCCccchhHHHHHHHHhhc--ccCCCcc
Confidence            44321 2344578999999999999899999999999999999999 999998753    35566666544  3344578


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCH-----HHHHHHHHh
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKF-----STLKDCLYR  177 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~-----~~il~~l~~  177 (251)
                      ++.++.+++.+||..||++||++     .++++|.+.
T Consensus       416 ~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff  452 (543)
T 3c4z_A          416 FSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF  452 (543)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGG
T ss_pred             cCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccc
Confidence            99999999999999999999964     778877654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.97  E-value=7.1e-33  Score=232.32  Aligned_cols=174  Identities=16%  Similarity=0.189  Sum_probs=133.5

Q ss_pred             CcccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEE----ccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILF----FSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~----~~~~~~kl~DFGla   66 (251)
                      +.+||++.++|.+.+....          ..++.|++.||+|||++||+||||||+|  |++    +.++.+||+|||++
T Consensus        86 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N--Ill~~~~~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGN--IMRVIGEDGQSVYKLTDFGAA  163 (319)
T ss_dssp             EEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEEECTTSCEEEEECCCTTC
T ss_pred             EEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH--EEEeccCCCCceEEEccCCCc
Confidence            4689998888888765432          2345678899999999999999999999  776    66778999999999


Q ss_pred             cccCCCceeecCCCCcCcccCCCcccC--------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC----hhHHHHHHH
Q psy2787          67 RYSQNDCYVMTERKPLPCPWCPMESLK--------HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN----GMQILQKID  134 (251)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~y~aPE~~~--------~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~----~~~~~~~i~  134 (251)
                      +......  ......+|..|+|||++.        +..++.++|||||||++|||++ |..||....    ..+....+.
T Consensus       164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~  240 (319)
T 4euu_A          164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT-GSLPFRPFEGPRRNKEVMYKII  240 (319)
T ss_dssp             EECCTTC--CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHH-SSCSEECTTCGGGCHHHHHHHH
T ss_pred             eecCCCC--ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCccchhHHHHHHHh
Confidence            8755432  233456899999999886        4678899999999999999999 999996432    234444444


Q ss_pred             hcCCC-------------------CCC----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         135 REGER-------------------LPR----PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       135 ~~~~~-------------------~~~----~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      .....                   .+.    +..++..+.+++.+||+.||++|||+++++++..+..
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~  308 (319)
T 4euu_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL  308 (319)
T ss_dssp             HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred             cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence            32221                   111    1234567889999999999999999999999987643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.97  E-value=8.2e-33  Score=231.34  Aligned_cols=165  Identities=14%  Similarity=0.107  Sum_probs=125.4

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+ .+++.+.....        ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++.......
T Consensus       135 v~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N--Ill~~~~~~kl~DFG~a~~~~~~~  211 (311)
T 3p1a_A          135 QTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPAN--IFLGPRGRCKLGDFGLLVELGTAG  211 (311)
T ss_dssp             EEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECGGGCEEECCCTTCEECC---
T ss_pred             EEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHH--EEECCCCCEEEccceeeeecccCC
Confidence            56777 34555544321        22356688899999999999999999999  999999999999999998754332


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                        ......||+.|+|||++.+ .++.++|||||||++|||++ |..|+.+..   ....+.........+..++.++.++
T Consensus       212 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~-g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l  284 (311)
T 3p1a_A          212 --AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVAC-NMELPHGGE---GWQQLRQGYLPPEFTAGLSSELRSV  284 (311)
T ss_dssp             -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHH-TCCCCSSHH---HHHHHTTTCCCHHHHTTSCHHHHHH
T ss_pred             --CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHh-CCCCCCCcc---HHHHHhccCCCcccccCCCHHHHHH
Confidence              2344568999999999886 68999999999999999999 866654422   2333322222223346788999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+||+.||++|||+.+++++.+
T Consensus       285 i~~~L~~dP~~Rpt~~ell~hp~  307 (311)
T 3p1a_A          285 LVMMLEPDPKLRATAEALLALPV  307 (311)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             HHHHcCCChhhCcCHHHHHhCcc
Confidence            99999999999999999998765

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.97  E-value=9.3e-33  Score=230.54  Aligned_cols=179  Identities=15%  Similarity=0.240  Sum_probs=130.6

Q ss_pred             cccccchhHHHHHhcC-----------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTE-----------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~-----------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .+||++.++|.+.+..           ....++.+++.||.|||++||+||||||+|  |+++.++.+||+|||++....
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~N--Il~~~~~~~kl~Dfg~~~~~~  187 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN--VFITATGVVKLGDLGLGRFFS  187 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTSCEEECCC-------
T ss_pred             EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHH--EEEcCCCCEEEEeccceeeec
Confidence            5788877777665432           112356688899999999999999999999  999999999999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC--hhHHHHHHHhcCCCCCCCCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN--GMQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      .... ......++..|+|||++.+..++.++||||||+++|+|++ |..||.+..  .......+............++.
T Consensus       188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (310)
T 2wqm_A          188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA-LQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE  265 (310)
T ss_dssp             ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCH
T ss_pred             CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHh-CCCCCcccchhHHHHHHHhhcccCCCCcccccCH
Confidence            3321 2234567888999999999889999999999999999999 999997643  33444555433333333467899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVMK  184 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~~  184 (251)
                      ++.+++.+||+.||++|||+.++++.|..+......
T Consensus       266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~  301 (310)
T 2wqm_A          266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS  301 (310)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence            999999999999999999999999999998776543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.97  E-value=2.9e-32  Score=228.95  Aligned_cols=173  Identities=17%  Similarity=0.241  Sum_probs=133.0

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+....         ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.....
T Consensus       104 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N--Il~~~~~~~kl~Dfg~~~~~~~  181 (326)
T 2x7f_A          104 LVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQN--VLLTENAEVKLVDFGVSAQLDR  181 (326)
T ss_dssp             EEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG--EEECTTCCEEECCCTTTC----
T ss_pred             EEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHH--EEEcCCCCEEEeeCcCceecCc
Confidence            3578888877777654321         2345678899999999999999999999  9999999999999999987543


Q ss_pred             CceeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q psy2787          72 DCYVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEAC  146 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  146 (251)
                      .. .......++..|+|||++.     +..++.++|||||||++|+|++ |..||.+.........+.........+..+
T Consensus       182 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (326)
T 2x7f_A          182 TV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE-GAPPLCDMHPMRALFLIPRNPAPRLKSKKW  259 (326)
T ss_dssp             ----------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCCCCSCSCS
T ss_pred             Cc-cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHhhcCccccCCcccc
Confidence            21 1233456888999999987     4568899999999999999999 999998887766666555444444445678


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +..+.+++.+||..||++|||+.++++|.+-
T Consensus       260 ~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~  290 (326)
T 2x7f_A          260 SKKFQSFIESCLVKNHSQRPATEQLMKHPFI  290 (326)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHHTSHHH
T ss_pred             CHHHHHHHHHHhccChhhCCCHHHHhhChHH
Confidence            9999999999999999999999999997654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.97  E-value=1.1e-32  Score=246.80  Aligned_cols=171  Identities=14%  Similarity=0.164  Sum_probs=140.5

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |.+||++.++|.+.+.....         .++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++....
T Consensus       261 lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeN--ILld~~g~vKL~DFGla~~~~~  338 (576)
T 2acx_A          261 LVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPEN--ILLDDHGHIRISDLGLAVHVPE  338 (576)
T ss_dssp             EEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTSCEEECCCTTCEECCT
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchhe--EEEeCCCCeEEEecccceeccc
Confidence            46899999999887654322         235677899999999999999999999  9999999999999999987654


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC----hhHHHHHHHhcCCCCCCCCCCc
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLN----GMQILQKIDREGERLPRPEACP  147 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~  147 (251)
                      ...  .....||+.|+|||++.+..++.++||||+||++|||++ |..||.+..    ..++...+...  ....+..++
T Consensus       339 ~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLlt-G~~PF~~~~~~~~~~~i~~~i~~~--~~~~p~~~s  413 (576)
T 2acx_A          339 GQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA-GQSPFQQRKKKIKREEVERLVKEV--PEEYSERFS  413 (576)
T ss_dssp             TCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHH-SSCSSSCSSSCCCHHHHHHHHHHC--CCCCCTTSC
T ss_pred             Ccc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHh-CCCCCcccccchhHHHHHHHhhcc--cccCCccCC
Confidence            322  223578999999999998889999999999999999999 999998753    34455555433  334457799


Q ss_pred             HHHHHHHHHHhccCCCCCC-----CHHHHHHHHHhh
Q psy2787         148 VEVYALMRQCWSKNPAERP-----KFSTLKDCLYRL  178 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rp-----s~~~il~~l~~~  178 (251)
                      .++.+++.+||..||++||     ++.++++|.+--
T Consensus       414 ~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~  449 (576)
T 2acx_A          414 PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFK  449 (576)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGT
T ss_pred             HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhc
Confidence            9999999999999999999     789999886643

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.2e-32  Score=231.70  Aligned_cols=173  Identities=14%  Similarity=0.143  Sum_probs=130.7

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++ +++.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        77 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~N--Il~~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           77 LVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQN--LLINERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             EEEECCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGG--EEECTTCCEEECSSSEEECC---
T ss_pred             EEecccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHH--EEECCCCCEEEccCcccccccCC
Confidence            3578887 46666554322        2245688899999999999999999999  99999999999999999864432


Q ss_pred             ceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC----------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP----------  141 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~----------  141 (251)
                      . .......+|..|+|||++.+ ..++.++||||+||++|+|++ |..||.+.+..+....+......+.          
T Consensus       154 ~-~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  231 (324)
T 3mtl_A          154 T-KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMAT-GRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN  231 (324)
T ss_dssp             ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGC
T ss_pred             c-cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcc
Confidence            2 12334567889999999876 568999999999999999999 9999999887766655533111110          


Q ss_pred             ------------------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         142 ------------------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       142 ------------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                                        ..+.++.++.+++.+||+.||++|||+.++++|.+-.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  286 (324)
T 3mtl_A          232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFL  286 (324)
T ss_dssp             HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGG
T ss_pred             hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhh
Confidence                              1135678999999999999999999999999987654

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.97  E-value=2.9e-32  Score=237.10  Aligned_cols=152  Identities=16%  Similarity=0.168  Sum_probs=121.8

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-CCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFS   98 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~   98 (251)
                      .++.|+++||+|||++||+||||||+|  ||++.+ +.+||+|||+++......  ......+|..|+|||++.+. .++
T Consensus       160 ~~~~qi~~aL~~LH~~~ivHrDlkp~N--ILl~~~~~~~kl~DFG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~  235 (420)
T 1j1b_A          160 LYMYQLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSAKQLVRGE--PNVSYICSRYYRAPELIFGATDYT  235 (420)
T ss_dssp             HHHHHHHHHHHHHHTTTEECSCCSGGG--EEEETTTTEEEECCCTTCEECCTTC--CCCSCCSCTTSCCHHHHTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHCCccccCCChhh--EEEeCCCCeEEeccchhhhhcccCC--CceeeeeCCCcCCHHHHcCCCCCC
Confidence            346788999999999999999999999  999865 578999999998754332  22345678899999998764 689


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-C----------------CCCC----------CCCCCcHHHH
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-G----------------ERLP----------RPEACPVEVY  151 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-~----------------~~~~----------~~~~~~~~~~  151 (251)
                      .++|||||||++|||++ |+.||.+.+..+.+..+... +                ...+          .+..++.++.
T Consensus       236 ~~~DiwSlG~il~ell~-G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  314 (420)
T 1j1b_A          236 SSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI  314 (420)
T ss_dssp             THHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHH
T ss_pred             chhhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHH
Confidence            99999999999999999 99999988765554443321 0                0111          1245688999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +|+.+||..||++|||+.++++|.+.
T Consensus       315 ~Li~~~L~~dP~~R~t~~e~l~hp~f  340 (420)
T 1j1b_A          315 ALCSRLLEYTPTARLTPLEACAHSFF  340 (420)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHhccCChhHCCCHHHHhCCHhh
Confidence            99999999999999999999998664

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.97  E-value=1.5e-32  Score=225.80  Aligned_cols=172  Identities=15%  Similarity=0.187  Sum_probs=117.1

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.......        .++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++......
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N--ili~~~~~~kl~dfg~~~~~~~~  165 (278)
T 3cok_A           88 LVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSN--LLLTRNMNIKIADFGLATQLKMP  165 (278)
T ss_dssp             EEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGG--EEECTTCCEEECCCTTCEECC--
T ss_pred             EEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--EEEcCCCCEEEEeecceeeccCC
Confidence            35789988888887654322        346678899999999999999999999  99999999999999999875432


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .. ......+++.|+|||++.+..++.++||||+|+++|+|++ |..||......+....+...  ....+..++.++.+
T Consensus       166 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~  241 (278)
T 3cok_A          166 HE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI-GRPPFDTDTVKNTLNKVVLA--DYEMPSFLSIEAKD  241 (278)
T ss_dssp             ---------------------------CTHHHHHHHHHHHHHH-SSCSSCCCSCC-----CCSS--CCCCCTTSCHHHHH
T ss_pred             CC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHh-CCCCCCChhHHHHHHHHhhc--ccCCccccCHHHHH
Confidence            21 2234567889999999998888999999999999999999 99999877665555544222  23445678999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.+||..||++|||+.++++|.+-.
T Consensus       242 li~~~l~~dp~~Rps~~~~l~h~~~~  267 (278)
T 3cok_A          242 LIHQLLRRNPADRLSLSSVLDHPFMS  267 (278)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTTSTTTC
T ss_pred             HHHHHcccCHhhCCCHHHHhcCcccc
Confidence            99999999999999999999876543

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.97  E-value=1.6e-31  Score=222.30  Aligned_cols=172  Identities=15%  Similarity=0.199  Sum_probs=137.2

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.+ +.+.....         ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.....
T Consensus        85 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~N--Il~~~~~~~kl~dfg~~~~~~~  161 (305)
T 2wtk_C           85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGN--LLLTTGGTLKISALGVAEALHP  161 (305)
T ss_dssp             EEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCCEEECCCTTCEECCT
T ss_pred             EEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCccc--EEEcCCCcEEeeccccccccCc
Confidence            357888766 33332221         12245678899999999999999999999  9999999999999999987542


Q ss_pred             C-ceeecCCCCcCcccCCCcccCCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcH
Q psy2787          72 D-CYVMTERKPLPCPWCPMESLKHNQ--FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        72 ~-~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      . .........++..|+|||++.+..  ++.++||||+|+++|+|++ |..||.+.+..+....+...  ....+..++.
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~  238 (305)
T 2wtk_C          162 FAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT-GLYPFEGDNIYKLFENIGKG--SYAIPGDCGP  238 (305)
T ss_dssp             TCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHC--CCCCCSSSCH
T ss_pred             cccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHHHhcC--CCCCCCccCH
Confidence            2 122334556889999999988654  3779999999999999999 99999998877777777544  3345567899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+.+++.+||..||++|||+.++++|.+-.
T Consensus       239 ~l~~li~~~l~~dp~~Rps~~~ll~~~~~~  268 (305)
T 2wtk_C          239 PLSDLLKGMLEYEPAKRFSIRQIRQHSWFR  268 (305)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHSHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence            999999999999999999999999986643

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.97  E-value=2.6e-33  Score=235.41  Aligned_cols=170  Identities=12%  Similarity=0.193  Sum_probs=130.7

Q ss_pred             CcccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+....          ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++...
T Consensus       138 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~~kL~DfG~a~~~~  215 (332)
T 3qd2_B          138 IQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN--IFFTMDDVVKVGDFGLVTAMD  215 (332)
T ss_dssp             EEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCTTCEECS
T ss_pred             EEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCccc--EEEeCCCCEEEeecCcccccc
Confidence            3579998888888765432          2356788999999999999999999999  999999999999999998755


Q ss_pred             CCce-----------eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC
Q psy2787          71 NDCY-----------VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER  139 (251)
Q Consensus        71 ~~~~-----------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~  139 (251)
                      ....           .......||+.|+|||++.+..++.++||||+|+++|+|++ |..|+..  .......+. ....
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-~~~~~~~--~~~~~~~~~-~~~~  291 (332)
T 3qd2_B          216 QDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLY-SFSTQME--RVRIITDVR-NLKF  291 (332)
T ss_dssp             CC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHS-CCCCHHH--HHHHHHHHH-TTCC
T ss_pred             cchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHH-cCCChhH--HHHHHHHhh-ccCC
Confidence            4321           22344578999999999999899999999999999999999 8776532  122222222 2222


Q ss_pred             CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 ~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +......++++.+++.+||+.||++|||+.++++|.+
T Consensus       292 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~  328 (332)
T 3qd2_B          292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAI  328 (332)
T ss_dssp             CHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTT
T ss_pred             CcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchh
Confidence            2222345678899999999999999999999998743

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=5e-32  Score=229.78  Aligned_cols=172  Identities=13%  Similarity=0.115  Sum_probs=135.0

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++. ++...+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        90 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N--il~~~~~~~kl~Dfg~a~~~~~~~  166 (346)
T 1ua2_A           90 VFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNN--LLLDENGVLKLADFGLAKSFGSPN  166 (346)
T ss_dssp             EEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTCCEEECCCGGGSTTTSCC
T ss_pred             EEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHH--EEEcCCCCEEEEecccceeccCCc
Confidence            5678875 6666554322        2345677899999999999999999999  999999999999999998754332


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC-----------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP-----------  141 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~-----------  141 (251)
                       .......+|+.|+|||++.+. .++.++||||+||++|+|++ |..||.+.+..+....+......+.           
T Consensus       167 -~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  244 (346)
T 1ua2_A          167 -RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP  244 (346)
T ss_dssp             -CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             -ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCc
Confidence             123446788999999998764 47899999999999999999 9999998887766665543211100           


Q ss_pred             ----------C-----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         142 ----------R-----PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       142 ----------~-----~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                                .     ...++.++.+++.+||..||++|||+.++++|.+-.
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~  296 (346)
T 1ua2_A          245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS  296 (346)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGT
T ss_pred             ccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhh
Confidence                      0     145678999999999999999999999999987653

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.97  E-value=2.2e-32  Score=230.06  Aligned_cols=178  Identities=25%  Similarity=0.479  Sum_probs=141.8

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus       121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~N--Ili~~~~~~kL~Dfg~~~~~~~~  198 (326)
T 2w1i_A          121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN--ILVENENRVKIGDFGLTKVLPQD  198 (326)
T ss_dssp             EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEEEETTEEEECCCTTCEECCSS
T ss_pred             EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcce--EEEcCCCcEEEecCcchhhcccc
Confidence            3578888888887665432        2245678899999999999999999999  99999999999999999875443


Q ss_pred             ce--eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh----------------hHHHHHHH
Q psy2787          73 CY--VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG----------------MQILQKID  134 (251)
Q Consensus        73 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~----------------~~~~~~i~  134 (251)
                      ..  .......++..|+|||++.+..++.++||||||+++|+|++ |..||.....                ..+... .
T Consensus       199 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  276 (326)
T 2w1i_A          199 KEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT-YIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL-L  276 (326)
T ss_dssp             CSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHH-TTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH-H
T ss_pred             ccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHh-cCCCCCCCHHHHHHhhccccchhhhHHHHHHH-h
Confidence            22  22344567778999999988888999999999999999999 9998854211                011222 2


Q ss_pred             hcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         135 REGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      ..+.+.+.+..++.++.+++.+||+.||++|||+.++++.|+.+....
T Consensus       277 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l  324 (326)
T 2w1i_A          277 KNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQM  324 (326)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             hcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence            345556677889999999999999999999999999999999887654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.97  E-value=1.3e-32  Score=244.45  Aligned_cols=171  Identities=16%  Similarity=0.247  Sum_probs=142.6

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC---ceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS---SSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~---~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+...       +..++.|++.||+|||++||+||||||+|  |+++.++   .+||+|||++....
T Consensus       123 lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~N--il~~~~~~~~~~kl~Dfg~a~~~~  200 (504)
T 3q5i_A          123 LVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPEN--ILLENKNSLLNIKIVDFGLSSFFS  200 (504)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEESSTTCCSSEEECCCTTCEECC
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHH--EEEecCCCCccEEEEECCCCEEcC
Confidence            468999998888765422       23456788899999999999999999999  9998776   69999999998765


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      ...  ......||+.|+|||++.+ .++.++||||+||++|+|++ |..||.+.+..++...+.......+.+  ..++.
T Consensus       201 ~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  276 (504)
T 3q5i_A          201 KDY--KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLC-GYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISD  276 (504)
T ss_dssp             TTS--CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCH
T ss_pred             CCC--ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCH
Confidence            432  2345578999999999874 68999999999999999999 999999999888888886655444322  57899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+++.+||..||.+|||+.++++|.+-
T Consensus       277 ~~~~li~~~L~~dp~~R~t~~e~l~h~~~  305 (504)
T 3q5i_A          277 EAKELIKLMLTYDYNKRCTAEEALNSRWI  305 (504)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHhcCHhh
Confidence            99999999999999999999999998763

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.97  E-value=1.1e-32  Score=226.05  Aligned_cols=173  Identities=15%  Similarity=0.219  Sum_probs=136.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.....       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        82 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~kl~dfg~~~~~~~~~  159 (276)
T 2yex_A           82 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN--LLLDERDNLKISDFGLATVFRYNN  159 (276)
T ss_dssp             EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCCEEECCCTTCEECEETT
T ss_pred             EEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHH--EEEccCCCEEEeeCCCccccCCCc
Confidence            357888888888776542       12346677899999999999999999999  999999999999999998643222


Q ss_pred             -eeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChh-HHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          74 -YVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGM-QILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        74 -~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                       ........++..|+|||++.+..+ +.++||||+|+++|+|++ |..||.+.... .....+............++..+
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (276)
T 2yex_A          160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP  238 (276)
T ss_dssp             EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHH-SSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred             chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHh-CCCCCCCCchHHHHHHHhhhcccccCchhhcCHHH
Confidence             223345678899999999987665 678999999999999999 99999875543 23333333333333345688999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+++.+||+.||++|||+.++++|.+
T Consensus       239 ~~li~~~l~~~p~~Rps~~~il~~~~  264 (276)
T 2yex_A          239 LALLHKILVENPSARITIPDIKKDRW  264 (276)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred             HHHHHHHCCCCchhCCCHHHHhcCcc
Confidence            99999999999999999999998755

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.97  E-value=9.2e-33  Score=228.47  Aligned_cols=169  Identities=15%  Similarity=0.232  Sum_probs=133.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCC--cccCCCCCCCceEEEc-cCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFF-SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~-~~~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+...       ...++.+++.||+|||+++  |+||||||+|  |+++ .++.+||+|||++....
T Consensus       106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~N--il~~~~~~~~kl~Dfg~~~~~~  183 (290)
T 1t4h_A          106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN--IFITGPTGSVKIGDLGLATLKR  183 (290)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGG--EEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHH--EEEECCCCCEEEeeCCCccccc
Confidence            357888888887765431       1234678889999999999  9999999999  9997 78899999999997644


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      ...   .....+++.|+|||++.+ .++.++||||+|+++|+|++ |..||.+... ......+.........+...+++
T Consensus       184 ~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (290)
T 1t4h_A          184 ASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMAT-SEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE  258 (290)
T ss_dssp             TTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHH-SSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred             ccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHh-CCCCCCCcCcHHHHHHHHhccCCccccCCCCCHH
Confidence            432   223467888999998874 58999999999999999999 9999987544 44444443332333345667889


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+++.+||+.||++|||+.++++|.+
T Consensus       259 l~~li~~~l~~dp~~Rps~~ell~h~~  285 (290)
T 1t4h_A          259 VKEIIEGCIRQNKDERYSIKDLLNHAF  285 (290)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHHccCChhhCCCHHHHhhCcc
Confidence            999999999999999999999998765

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=9.7e-33  Score=233.23  Aligned_cols=178  Identities=16%  Similarity=0.239  Sum_probs=138.4

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhh--------hCCcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFS--------VNNICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH--------~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      +.+||++.++|.+.+...      ...++.|++.||+|||        +++|+||||||+|  |+++.++.+||+|||++
T Consensus       117 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~N--Ill~~~~~~kL~Dfg~~  194 (342)
T 1b6c_B          117 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN--ILVKKNGTCCIADLGLA  194 (342)
T ss_dssp             EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGG--EEECTTSCEEECCCTTC
T ss_pred             EEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHH--EEECCCCCEEEEECCCc
Confidence            367899888888876532      2245677889999999        8999999999999  99999999999999999


Q ss_pred             cccCCCcee---ecCCCCcCcccCCCcccCCCC------CCchhHHHHHHHHHHHHHhCC----------CCCCCCCC--
Q psy2787          67 RYSQNDCYV---MTERKPLPCPWCPMESLKHNQ------FSQASDAWMFGVTIWEMFTFG----------AEPWVGLN--  125 (251)
Q Consensus        67 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~------~~~~~Di~S~G~il~el~~~g----------~~pf~~~~--  125 (251)
                      +........   ......+|..|+|||++.+..      ++.++||||||+++|||++ |          ..||....  
T Consensus       195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~t-g~~~~~~~~~~~~p~~~~~~~  273 (342)
T 1b6c_B          195 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPYYDLVPS  273 (342)
T ss_dssp             EEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHT-TBCBTTBCCCCCCTTTTTSCS
T ss_pred             eeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHh-ccCcCCcccccccCccccCcC
Confidence            875443221   234567899999999988652      3368999999999999999 8          78886542  


Q ss_pred             ---hhHHHHHHHhcCCCCCCCC-----CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         126 ---GMQILQKIDREGERLPRPE-----ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       126 ---~~~~~~~i~~~~~~~~~~~-----~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                         ...+...+.....++..+.     .++..+.+++.+||+.||++|||+.+++++|+.+...
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          274 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence               2344444444444444332     3456899999999999999999999999999988654

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.97  E-value=1.7e-32  Score=238.47  Aligned_cols=178  Identities=12%  Similarity=0.116  Sum_probs=131.9

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC---ceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS---SSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~---~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+....       ..++.|++.||+|||+++|+||||||+|  |+++.++   .+||+|||+++...
T Consensus       216 lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~N--Ill~~~~~~~~~kl~DFG~a~~~~  293 (419)
T 3i6u_A          216 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPEN--VLLSSQEEDCLIKITDFGHSKILG  293 (419)
T ss_dssp             EEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEESSSSSSCCEEECCSSTTTSCC
T ss_pred             EEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHh--EEEecCCCcceEEEeecccceecC
Confidence            4689999999988765432       2345678899999999999999999999  9996544   59999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh-HHHHHHHhcCCCCC--CCC
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKH---NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM-QILQKIDREGERLP--RPE  144 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~-~~~~~i~~~~~~~~--~~~  144 (251)
                      ...  ......||+.|+|||++.+   ..++.++||||+||++|+|++ |..||.+.... .+...+........  ...
T Consensus       294 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~llt-g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~  370 (419)
T 3i6u_A          294 ETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS-GYPPFSEHRTQVSLKDQITSGKYNFIPEVWA  370 (419)
T ss_dssp             -------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHH-SSCSSCCCSSSCCHHHHHHTTCCCCCHHHHT
T ss_pred             CCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHH-CCCCCCCCcchHHHHHHHhcCCCCCCchhhc
Confidence            432  2344678999999999863   567889999999999999999 99999875433 33344432222221  125


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      .++..+.+++.+||+.||++|||+.++++|.+--.....
T Consensus       371 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~~  409 (419)
T 3i6u_A          371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK  409 (419)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHHHH
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChhHH
Confidence            688999999999999999999999999999876554443

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.97  E-value=1.3e-32  Score=229.28  Aligned_cols=175  Identities=20%  Similarity=0.262  Sum_probs=133.6

Q ss_pred             cccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           2 SANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      .+||++.++|.+.+....          ..++.+++.||+|||++||+||||||+|  |+++.++.+||+|||+++....
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~N--ili~~~~~~kl~Dfg~~~~~~~  185 (307)
T 2nru_A          108 VYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSAN--ILLDEAFTAKISDFGLARASEK  185 (307)
T ss_dssp             EEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEECTTCCEEECCCTTCEECCS
T ss_pred             EEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHH--EEEcCCCcEEEeeccccccccc
Confidence            578888888877654211          1245677899999999999999999999  9999999999999999987543


Q ss_pred             Cc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh----HHHHHHHhcC---------
Q psy2787          72 DC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM----QILQKIDREG---------  137 (251)
Q Consensus        72 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~----~~~~~i~~~~---------  137 (251)
                      .. ........+|..|+|||++.+ .++.++||||||+++|+|++ |..||.+....    .+...+....         
T Consensus       186 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (307)
T 2nru_A          186 FAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIIT-GLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDK  263 (307)
T ss_dssp             CSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHH-CCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCS
T ss_pred             ccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHH-CCCCcccCcchHHHHHHHHHhhhhhhhhhhhccc
Confidence            22 223445678999999998875 47899999999999999999 99999765432    2222221111         


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .....+..++..+.+++.+||+.||++|||+.+++++|+.+..
T Consensus       264 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            1112223456789999999999999999999999999988753

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=6.1e-32  Score=229.49  Aligned_cols=173  Identities=15%  Similarity=0.118  Sum_probs=132.7

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++. ++...+...        ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus       102 v~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~N--Il~~~~~~~kl~Dfg~a~~~~~~~  178 (351)
T 3mi9_A          102 VFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN--VLITRDGVLKLADFGLARAFSLAK  178 (351)
T ss_dssp             EEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECCCCS
T ss_pred             EEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHH--EEEcCCCCEEEccchhcccccccc
Confidence            5788874 444443332        22356678899999999999999999999  999999999999999998754221


Q ss_pred             ---eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCC--
Q psy2787          74 ---YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEA--  145 (251)
Q Consensus        74 ---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~--  145 (251)
                         ........+|+.|+|||++.+ ..++.++||||+||++|+|++ |..||.+.........+.......+  ..+.  
T Consensus       179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  257 (351)
T 3mi9_A          179 NSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPNVD  257 (351)
T ss_dssp             SSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGG
T ss_pred             cccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCChhhccccc
Confidence               222345678999999999876 457999999999999999999 9999999877666655533211111  1011  


Q ss_pred             --------------------------CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         146 --------------------------CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       146 --------------------------~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                                                .++.+.+++.+||+.||++|||+.++++|.+-.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  316 (351)
T 3mi9_A          258 NYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW  316 (351)
T ss_dssp             GCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGG
T ss_pred             cchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCCCCcC
Confidence                                      266799999999999999999999999987653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.97  E-value=1.5e-32  Score=235.13  Aligned_cols=170  Identities=14%  Similarity=0.140  Sum_probs=125.1

Q ss_pred             cccccchhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           2 SANFAELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      .+||++. ++.+.....     ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......  .
T Consensus       108 v~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~N--Il~~~~~~~kl~Dfg~a~~~~~~~--~  182 (371)
T 2xrw_A          108 VMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN--IVVKSDCTLKILDFGLARTAGTSF--M  182 (371)
T ss_dssp             EEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTSCEEECCCCC-----------
T ss_pred             EEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHH--EEEcCCCCEEEEEeeccccccccc--c
Confidence            5678874 566554432     22356788899999999999999999999  999999999999999998754331  2


Q ss_pred             cCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC----------------
Q psy2787          77 TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL----------------  140 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~----------------  140 (251)
                      .....+|+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+....+......+                
T Consensus       183 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  261 (371)
T 2xrw_A          183 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIK-GGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYV  261 (371)
T ss_dssp             -------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHH
T ss_pred             cCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHH
Confidence            334578889999999999889999999999999999999 999999887766665553321110                


Q ss_pred             ----CC--------------CC------CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         141 ----PR--------------PE------ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       141 ----~~--------------~~------~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                          ..              +.      ..+.++.+++.+||..||++|||+.++++|.+-
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~  322 (371)
T 2xrw_A          262 ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI  322 (371)
T ss_dssp             HSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHH
T ss_pred             hhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCCcch
Confidence                00              00      015678999999999999999999999998764

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=1.4e-32  Score=236.28  Aligned_cols=152  Identities=16%  Similarity=0.149  Sum_probs=123.4

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEc-cCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-CCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFF-SSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFS   98 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~   98 (251)
                      .++.|+++||+|||++||+||||||+|  |+++ .++.+||+|||+++......  ......+|..|+|||++.+. .++
T Consensus       145 ~i~~qi~~aL~~LH~~gi~H~Dikp~N--il~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~  220 (383)
T 3eb0_A          145 IYIYQLFRAVGFIHSLGICHRDIKPQN--LLVNSKDNTLKLCDFGSAKKLIPSE--PSVAYICSRFYRAPELMLGATEYT  220 (383)
T ss_dssp             HHHHHHHHHHHHHHTTTEECSCCCGGG--EEEETTTTEEEECCCTTCEECCTTS--CCCCCCCCSSCCCHHHHTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHCcCccCccCHHH--EEEcCCCCcEEEEECCCCcccCCCC--CCcCcccCCCccCHHHhcCCCCCC
Confidence            356788899999999999999999999  9997 67899999999998754332  23345678889999998765 489


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-----------------C----------CCCCCCcHHHH
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-----------------L----------PRPEACPVEVY  151 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-----------------~----------~~~~~~~~~~~  151 (251)
                      .++||||+||++|||++ |..||.+.+..+....+......                 .          ..+..++.++.
T Consensus       221 ~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (383)
T 3eb0_A          221 PSIDLWSIGCVFGELIL-GKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAI  299 (383)
T ss_dssp             THHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHH
T ss_pred             cchhhhhHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHH
Confidence            99999999999999999 99999988776655554321000                 0          02355888999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||+.||++|||+.++++|-+-
T Consensus       300 ~li~~~L~~dP~~R~t~~e~l~hp~f  325 (383)
T 3eb0_A          300 DLLEQILRYEPDLRINPYEAMAHPFF  325 (383)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHHccCChhhCCCHHHHhcCHHH
Confidence            99999999999999999999988653

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.97  E-value=2.6e-32  Score=230.55  Aligned_cols=171  Identities=15%  Similarity=0.200  Sum_probs=141.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.....       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus       118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~N--Il~~~~~~~kl~Dfg~~~~~~~~~  195 (335)
T 2owb_A          118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN--LFLNEDLEVKIGDFGLATKVEYDG  195 (335)
T ss_dssp             EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchh--EEEcCCCCEEEeeccCceecccCc
Confidence            357898888887755421       23456788899999999999999999999  999999999999999998754322


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......++..|+|||++.+..++.++||||||+++|+|++ |..||.+....+....+....  ...+..++..+.++
T Consensus       196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l  271 (335)
T 2owb_A          196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV-GKPPFETSCLKETYLRIKKNE--YSIPKHINPVAASL  271 (335)
T ss_dssp             C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHTC--CCCCTTSCHHHHHH
T ss_pred             c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHH-CcCCCCCCCHHHHHHHHhcCC--CCCCccCCHHHHHH
Confidence            1 2344568889999999998889999999999999999999 999999887777766665443  34456789999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+||+.||++|||+.+++++.+-
T Consensus       272 i~~~l~~dp~~Rps~~ell~~~~~  295 (335)
T 2owb_A          272 IQKMLQTDPTARPTINELLNDEFF  295 (335)
T ss_dssp             HHHHTCSSGGGSCCGGGGGGSHHH
T ss_pred             HHHHccCChhHCcCHHHHhcCccc
Confidence            999999999999999999988664

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.97  E-value=1.3e-32  Score=232.52  Aligned_cols=163  Identities=14%  Similarity=0.187  Sum_probs=131.6

Q ss_pred             cccccchh-HHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELN-AFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~-~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+..+ +|.+.....       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus       107 v~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N--Ill~~~~~~kL~Dfg~a~~~~~~~  184 (335)
T 3dls_A          107 VMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDEN--IVIAEDFTIKLIDFGSAAYLERGK  184 (335)
T ss_dssp             EEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTSCEEECCCTTCEECCTTC
T ss_pred             EEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHH--EEEcCCCcEEEeecccceECCCCC
Confidence            56777555 666655432       12356788899999999999999999999  999999999999999998755432


Q ss_pred             eeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        ......||+.|+|||++.+..+ +.++||||||+++|+|++ |..||.....        ........+..++.++.+
T Consensus       185 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~--------~~~~~~~~~~~~~~~l~~  253 (335)
T 3dls_A          185 --LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF-EENPFCELEE--------TVEAAIHPPYLVSKELMS  253 (335)
T ss_dssp             --CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH-SSCSCSSGGG--------GTTTCCCCSSCCCHHHHH
T ss_pred             --ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHh-CCCchhhHHH--------HHhhccCCCcccCHHHHH
Confidence              2233568899999999988776 789999999999999999 9999976332        112233445668999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+||+.||++|||+.+++++.+-
T Consensus       254 li~~~L~~dP~~Rps~~ell~hp~~  278 (335)
T 3dls_A          254 LVSGLLQPVPERRTTLEKLVTDPWV  278 (335)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHCTTT
T ss_pred             HHHHHccCChhhCcCHHHHhcCccc
Confidence            9999999999999999999998764

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.97  E-value=1.7e-33  Score=231.38  Aligned_cols=174  Identities=13%  Similarity=0.228  Sum_probs=139.3

Q ss_pred             CcccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhhhCC-----cccCCCCCCCceEEEccCCceEEccCC
Q psy2787           1 MSANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFSVNN-----ICSCQFSSSSLLILFFSSSSSSSGDFG   64 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH~~~-----iiHrdlkp~ni~il~~~~~~~kl~DFG   64 (251)
                      +.+||++.++|.+.....           ...++.|++.||+|||+++     |+||||||+|  |+++.++.+||+|||
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~N--Il~~~~~~~kl~dfg  161 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN--VFLDGKQNVKLGDFG  161 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGG--EEECSSSCEEECCCC
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhh--EEEcCCCCEEEecCc
Confidence            357888877777654321           2234667889999999999     9999999999  999999999999999


Q ss_pred             CCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q psy2787          65 MMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE  144 (251)
Q Consensus        65 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  144 (251)
                      +++....... ......++..|+|||++.+..++.++||||||+++|+|++ |..||.+.+..++...+.. +.....+.
T Consensus       162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~i~~-~~~~~~~~  238 (279)
T 2w5a_A          162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA-LMPPFTAFSQKELAGKIRE-GKFRRIPY  238 (279)
T ss_dssp             HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHH-TCCCCCCT
T ss_pred             hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHH-CCCCCcccCHHHHHHHHhh-cccccCCc
Confidence            9987543321 1122457888999999998889999999999999999999 9999999887777777643 44445667


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      .++.++.+++.+||+.||++|||+.+++++++...
T Consensus       239 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          239 RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             ccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence            89999999999999999999999999999876543

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.97  E-value=5.5e-32  Score=227.18  Aligned_cols=169  Identities=17%  Similarity=0.164  Sum_probs=134.9

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      .+||++ ++|.+.+....         ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        97 v~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~N--ili~~~~~~kl~Dfg~~~~~~~~  173 (326)
T 1blx_A           97 VFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN--ILVTSSGQIKLADFGLARIYSFQ  173 (326)
T ss_dssp             EEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTCCEEECSCCSCCCCCGG
T ss_pred             EEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHH--eEEcCCCCEEEecCcccccccCC
Confidence            567777 56666554322         2345678899999999999999999999  99999999999999999865432


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-------------  139 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-------------  139 (251)
                      .  ......++..|+|||++.+..++.++||||||+++|+|++ |..||.+....+....+......             
T Consensus       174 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  250 (326)
T 1blx_A          174 M--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP  250 (326)
T ss_dssp             G--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSC
T ss_pred             C--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHc-CCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccc
Confidence            2  2345678889999999998889999999999999999999 99999988776666555321000             


Q ss_pred             ------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 ------------LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 ------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                  ......++..+.+++.+||+.||++|||+.++++|.+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  299 (326)
T 1blx_A          251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY  299 (326)
T ss_dssp             GGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             hhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCcc
Confidence                        0112468899999999999999999999999998754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.97  E-value=1.7e-32  Score=227.26  Aligned_cols=172  Identities=15%  Similarity=0.199  Sum_probs=142.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.....       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~kl~dfg~~~~~~~~~  169 (294)
T 2rku_A           92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGN--LFLNEDLEVKIGDFGLATKVEYDG  169 (294)
T ss_dssp             EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCTTCEECCSTT
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHh--EEEcCCCCEEEEeccCceecccCc
Confidence            357888888887755421       23456788899999999999999999999  999999999999999998754322


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......++..|+|||++.+..++.++||||+|+++|+|++ |..||.+....+....+...  ....+..++..+.++
T Consensus       170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l  245 (294)
T 2rku_A          170 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV-GKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASL  245 (294)
T ss_dssp             C-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTT--CCCCCTTSCHHHHHH
T ss_pred             c-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHhhc--cCCCccccCHHHHHH
Confidence            1 2334568889999999998889999999999999999999 99999988777766666433  344566789999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +.+||+.||++|||+.+++++.+-.
T Consensus       246 i~~~l~~~p~~Rps~~~ll~~~~~~  270 (294)
T 2rku_A          246 IQKMLQTDPTARPTINELLNDEFFT  270 (294)
T ss_dssp             HHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             HHHHcccChhhCcCHHHHhhChhee
Confidence            9999999999999999999986643

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.97  E-value=2.1e-32  Score=233.08  Aligned_cols=172  Identities=19%  Similarity=0.224  Sum_probs=134.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.+...       ...++.+++.||+|||++ ||+||||||+|  |+++.++.+||+|||++......
T Consensus       108 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~  185 (360)
T 3eqc_A          108 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN--ILVNSRGEIKLCDFGVSGQLIDS  185 (360)
T ss_dssp             EEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGG--EEECTTCCEEECCCCCCHHHHHH
T ss_pred             EEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHH--EEECCCCCEEEEECCCCcccccc
Confidence            367899888887765432       224566788999999996 99999999999  99999999999999999764322


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHH---------------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQ---------------------  131 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~---------------------  131 (251)
                         ......+|+.|+|||++.+..++.++||||+||++|+|++ |..||...+..+...                     
T Consensus       186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (360)
T 3eqc_A          186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV-GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  261 (360)
T ss_dssp             ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHH-TSCCSSCCCHHHHHHHHC------------------
T ss_pred             ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence               2234578889999999999999999999999999999999 999998765443322                     


Q ss_pred             ---------------------HHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         132 ---------------------KIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       132 ---------------------~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                                           .+............++.++.+++.+||+.||++|||+.++++|.+-.
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  329 (360)
T 3eqc_A          262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIK  329 (360)
T ss_dssp             ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhh
Confidence                                 22222222222345788999999999999999999999999987743

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.97  E-value=5.7e-33  Score=232.31  Aligned_cols=174  Identities=11%  Similarity=0.154  Sum_probs=130.4

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc---eEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS---SSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~---~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++.   +||+|||++....
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~N--il~~~~~~~~~~kl~Dfg~~~~~~  165 (316)
T 2ac3_A           88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPEN--ILCEHPNQVSPVKICDFDLGSGIK  165 (316)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEESCSSSSCSEEECCTTCCC---
T ss_pred             EEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHH--EEEccCCCcCceEEEEccCccccc
Confidence            468999888888765432       22356778899999999999999999999  99987765   9999999998643


Q ss_pred             CCc------eeecCCCCcCcccCCCcccCC-----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-------------
Q psy2787          71 NDC------YVMTERKPLPCPWCPMESLKH-----NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-------------  126 (251)
Q Consensus        71 ~~~------~~~~~~~~~~~~y~aPE~~~~-----~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-------------  126 (251)
                      ...      ........+|..|+|||++.+     ..++.++||||+||++|+|++ |..||.+...             
T Consensus       166 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~  244 (316)
T 2ac3_A          166 LNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLS-GYPPFVGRCGSDCGWDRGEACPA  244 (316)
T ss_dssp             ----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHH-SSCSCCCCCCSCSCC----CCHH
T ss_pred             cCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHH-CCCCCcccccccccccccccchh
Confidence            211      111223468999999999875     457889999999999999999 9999977532             


Q ss_pred             --hHHHHHHHhcCCCCCCC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         127 --MQILQKIDREGERLPRP--EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       127 --~~~~~~i~~~~~~~~~~--~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                        ..+...+.......+..  ..++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       245 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~  299 (316)
T 2ac3_A          245 CQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV  299 (316)
T ss_dssp             HHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTC
T ss_pred             HHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhh
Confidence              23445554443333221  4688999999999999999999999999998664

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.97  E-value=1.5e-32  Score=229.35  Aligned_cols=173  Identities=18%  Similarity=0.272  Sum_probs=130.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.+.+.+.....       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~  156 (311)
T 4agu_A           79 LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPEN--ILITKHSVIKLCDFGFARLLTGPS  156 (311)
T ss_dssp             EEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhh--EEEcCCCCEEEeeCCCchhccCcc
Confidence            357899988887765432       12345677899999999999999999999  999999999999999998755332


Q ss_pred             eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc----------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE----------------  136 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~----------------  136 (251)
                      . ......+|..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+....+....+...                
T Consensus       157 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (311)
T 4agu_A          157 D-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLS-GVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ  234 (311)
T ss_dssp             ----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred             c-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence            2 2234567889999999876 567999999999999999999 99999988766554433221                


Q ss_pred             ---CCCCCCC----------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         137 ---GERLPRP----------EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       137 ---~~~~~~~----------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                         +...+.+          +.++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  288 (311)
T 4agu_A          235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYF  288 (311)
T ss_dssp             GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGG
T ss_pred             ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHH
Confidence               1111111          4578899999999999999999999999998653

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.97  E-value=1.4e-32  Score=231.44  Aligned_cols=172  Identities=13%  Similarity=0.166  Sum_probs=116.7

Q ss_pred             cccccchhHHHHHhcC---C-------CCCCCchhhHHhhhhhhCC--cccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           2 SANFAELNAFQENYTE---P-------CRKPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~---~-------~~~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      .+||+. |+|.+.+..   .       ...++.|++.||+|||+++  |+||||||+|  |+++.++.+||+|||+++..
T Consensus       112 v~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~N--Il~~~~~~~kl~Dfg~~~~~  188 (337)
T 3ll6_A          112 LTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVEN--LLLSNQGTIKLCDFGSATTI  188 (337)
T ss_dssp             EEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGG--CEECTTSCEEBCCCTTCBCC
T ss_pred             EEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCccc--EEECCCCCEEEecCccceec
Confidence            467776 566554432   1       2235667889999999999  9999999999  99999999999999999875


Q ss_pred             CCCcee-----------ecCCCCcCcccCCCccc---CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh
Q psy2787          70 QNDCYV-----------MTERKPLPCPWCPMESL---KHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR  135 (251)
Q Consensus        70 ~~~~~~-----------~~~~~~~~~~y~aPE~~---~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~  135 (251)
                      ......           ......+|+.|+|||++   .+..++.++||||||+++|+|++ |..||.+.....+.    .
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~-g~~p~~~~~~~~~~----~  263 (337)
T 3ll6_A          189 SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCF-RQHPFEDGAKLRIV----N  263 (337)
T ss_dssp             SSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHH-SSCCC--------------
T ss_pred             cccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHh-CCCCCcchhHHHhh----c
Confidence            432211           11244688899999998   45678899999999999999999 99999765543332    2


Q ss_pred             cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         136 EGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       136 ~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .....+.+..++..+.+++.+||+.||++|||+.+++++|+.+...
T Consensus       264 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          264 GKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             --CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            3334444566778899999999999999999999999999888654

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.97  E-value=9.1e-33  Score=232.79  Aligned_cols=172  Identities=16%  Similarity=0.139  Sum_probs=126.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEE-----ccCCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILF-----FSSSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~-----~~~~~~kl~DFGla~~   68 (251)
                      +.+||++ ++|.+.+...       ...++.|++.||+|||++||+||||||+|  |++     +..+.+||+|||+++.
T Consensus       110 lv~e~~~-~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~N--Ill~~~~~~~~~~~kl~Dfg~a~~  186 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQN--LLLSVSDASETPVLKIGDFGLARA  186 (329)
T ss_dssp             EEEECCS-EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEEEC-----CCEEEECCTTHHHH
T ss_pred             EEEecCC-CCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHH--EEEecCCCCccceEEECcCCCccc
Confidence            3578887 4777765432       22456788899999999999999999999  888     4455699999999987


Q ss_pred             cCCCceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC-----
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR-----  142 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~-----  142 (251)
                      ...... ......+|..|+|||++.+. .++.++||||+||++|+|++ |..||.+....+....+......+..     
T Consensus       187 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (329)
T 3gbz_A          187 FGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLM-KTPLFPGDSEIDQLFKIFEVLGLPDDTTWPG  264 (329)
T ss_dssp             HC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             cCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHH-CCCCcCCCCHHHHHHHHHHHhCCCchhhhhh
Confidence            543321 23345678899999999874 48999999999999999999 99999988776665555332111100     


Q ss_pred             -----------------------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         143 -----------------------PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       143 -----------------------~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                             +..++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f  322 (329)
T 3gbz_A          265 VTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYF  322 (329)
T ss_dssp             GGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             hhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCccc
Confidence                                   01167899999999999999999999999987653

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=4.4e-33  Score=241.81  Aligned_cols=148  Identities=12%  Similarity=0.072  Sum_probs=120.3

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCccc--------
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESL--------   92 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~--------   92 (251)
                      .++.|+++||+|||++||+||||||+|  ||++.++.+||+|||+++.....    .....| +.|+|||++        
T Consensus       215 ~i~~qi~~aL~~LH~~~iiHrDiKp~N--ILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~  287 (413)
T 3dzo_A          215 QLTLQVIRLLASLHHYGLVHTYLRPVD--IVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFG  287 (413)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGG--EEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTG
T ss_pred             HHHHHHHHHHHHHHhCCcccCCcccce--EEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccc
Confidence            345799999999999999999999999  99999999999999999864432    334455 889999999        


Q ss_pred             --CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHH
Q psy2787          93 --KHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFST  170 (251)
Q Consensus        93 --~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~  170 (251)
                        .+..++.++|||||||++|||++ |+.||.+....+....+.      .....+|.++.+++.+||+.||++||++.+
T Consensus       288 ~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~  360 (413)
T 3dzo_A          288 QHHPTLMTFAFDTWTLGLAIYWIWC-ADLPNTDDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQ  360 (413)
T ss_dssp             GGCCEEECHHHHHHHHHHHHHHHHH-SSCCCCTTGGGSCSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             cccCcCCCchhhHHHHHHHHHHHHH-CCCCCCCcchhhhHHHHH------hhcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence              55568889999999999999999 999998766544333332      122367899999999999999999999999


Q ss_pred             HHHH--HHhhcHHH
Q psy2787         171 LKDC--LYRLTPAV  182 (251)
Q Consensus       171 il~~--l~~~~~~~  182 (251)
                      ++++  +..+....
T Consensus       361 ~l~~~~~~~~~~~~  374 (413)
T 3dzo_A          361 AMETPEYEQLRTEL  374 (413)
T ss_dssp             HTTSHHHHHHHHHH
T ss_pred             HHhCHHHHHHHHHH
Confidence            9887  33444433

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.97  E-value=4.2e-32  Score=229.47  Aligned_cols=173  Identities=15%  Similarity=0.230  Sum_probs=113.8

Q ss_pred             CcccccchhHHHHHhcCCCC---------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc---CCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPCR---------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS---SSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~---------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~---~~~~kl~DFGla~~   68 (251)
                      +.+||++.++|.+.+.....         .++.|++.||+|||++||+||||||+|  |+++.   ++.+||+|||+++.
T Consensus       103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~N--Ill~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN--LLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH--EEEEecCCCceEEEecccccee
Confidence            36899999899887765432         345677899999999999999999999  88875   45699999999986


Q ss_pred             cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHH----HHHHhcCCC--CCC
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQIL----QKIDREGER--LPR  142 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~----~~i~~~~~~--~~~  142 (251)
                      ....   ......+|+.|+|||++.+..++.++||||+|+++|+|++ |..||.+.......    ..+......  .+.
T Consensus       181 ~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (336)
T 3fhr_A          181 TTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE  256 (336)
T ss_dssp             C-------------------------CHHHHHHHHHHHHHHHHHHHH-SSCCC---------------------CCCTTT
T ss_pred             cccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHH-CCCCCCCccchhhhhhHHHhhhccccccCchh
Confidence            5433   2334567889999999988888999999999999999999 99999776543331    122111112  222


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ...++.++.+++.+||+.||++|||+.++++|.+-..
T Consensus       257 ~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  293 (336)
T 3fhr_A          257 WSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ  293 (336)
T ss_dssp             STTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             hccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccc
Confidence            3578999999999999999999999999999877543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.97  E-value=5.1e-32  Score=222.28  Aligned_cols=170  Identities=12%  Similarity=0.210  Sum_probs=132.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~~l~dfg~~~~~~~~~  165 (276)
T 2h6d_A           88 MVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPEN--VLLDAHMNAKIADFGLSNMMSDGE  165 (276)
T ss_dssp             EEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGG--EEECTTSCEEECCCCGGGCCCC--
T ss_pred             EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhh--EEECCCCCEEEeecccccccCCCc
Confidence            357888777777655321       23456778899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                        ......+++.|+|||++.+..+ +.++||||+|+++|+|++ |..||.+.........+...  ....+..++.++.+
T Consensus       166 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~  240 (276)
T 2h6d_A          166 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC-GTLPFDDEHVPTLFKKIRGG--VFYIPEYLNRSVAT  240 (276)
T ss_dssp             -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHH
T ss_pred             --ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHh-CCCCCCCCcHHHHHHHhhcC--cccCchhcCHHHHH
Confidence              2234567888999999987765 589999999999999999 99999988877777776443  33445678999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+||+.||++|||+.++++|.+-
T Consensus       241 li~~~l~~~p~~Rps~~~~l~h~~~  265 (276)
T 2h6d_A          241 LLMHMLQVDPLKRATIKDIREHEWF  265 (276)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred             HHHHHccCChhhCCCHHHHHhChhh
Confidence            9999999999999999999998653

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.97  E-value=9.5e-32  Score=234.67  Aligned_cols=172  Identities=15%  Similarity=0.182  Sum_probs=123.9

Q ss_pred             cccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||++ ++|.+.+....       ..++.|+++||+|||++||+||||||+|  |+++.++.+||+|||+++.......
T Consensus       108 v~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~N--ILl~~~~~~kL~DFGla~~~~~~~~  184 (432)
T 3n9x_A          108 VLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPAN--CLLNQDCSVKVCDFGLARTINSEKD  184 (432)
T ss_dssp             EEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCTTCEEC-----
T ss_pred             EEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH--eEECCCCCEEEccCCCccccccccc
Confidence            567777 57777665432       2456788899999999999999999999  9999999999999999987543221


Q ss_pred             ---------------------eecCCCCcCcccCCCccc-CCCCCCchhHHHHHHHHHHHHHhCCCCC-----------C
Q psy2787          75 ---------------------VMTERKPLPCPWCPMESL-KHNQFSQASDAWMFGVTIWEMFTFGAEP-----------W  121 (251)
Q Consensus        75 ---------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~S~G~il~el~~~g~~p-----------f  121 (251)
                                           .......+|+.|+|||++ .+..++.++||||+||++|||++ |..|           |
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~-g~~p~~~~~~~~~p~f  263 (432)
T 3n9x_A          185 TNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN-MLQSHINDPTNRFPLF  263 (432)
T ss_dssp             --------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHT-TCTTTCSSGGGCCCSC
T ss_pred             ccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHh-cccccccccccccccC
Confidence                                 122456789999999986 55669999999999999999997 5443           3


Q ss_pred             CCCCh-----------------hHH------------------------HHHHHhcCCCCCCC-----CCCcHHHHHHHH
Q psy2787         122 VGLNG-----------------MQI------------------------LQKIDREGERLPRP-----EACPVEVYALMR  155 (251)
Q Consensus       122 ~~~~~-----------------~~~------------------------~~~i~~~~~~~~~~-----~~~~~~~~~li~  155 (251)
                      .+.+.                 .+.                        ...+.......+.+     +.+++++.+|+.
T Consensus       264 ~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~  343 (432)
T 3n9x_A          264 PGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLE  343 (432)
T ss_dssp             CCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred             CCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH
Confidence            33220                 111                        11111111111111     458899999999


Q ss_pred             HHhccCCCCCCCHHHHHHHHHh
Q psy2787         156 QCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       156 ~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +||..||++|||+.++++|.+-
T Consensus       344 ~mL~~dP~~R~ta~e~L~Hp~f  365 (432)
T 3n9x_A          344 SMLKFNPNKRITIDQALDHPYL  365 (432)
T ss_dssp             HHSCSSTTTSCCHHHHHTCGGG
T ss_pred             HHhcCCcccCCCHHHHhcChhh
Confidence            9999999999999999998654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.97  E-value=4.4e-32  Score=238.35  Aligned_cols=174  Identities=17%  Similarity=0.195  Sum_probs=122.6

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+. ++|.+.+...       +..++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+++.......
T Consensus       135 v~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~N--ILl~~~~~~kl~DFGla~~~~~~~~  211 (458)
T 3rp9_A          135 VLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPAN--CLVNQDCSVKVCDFGLARTVDYPEN  211 (458)
T ss_dssp             EECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTCCEEECCCTTCBCTTSCTT
T ss_pred             EEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhh--EEECCCCCEeecccccchhccCccc
Confidence            567765 5677665543       23456788899999999999999999999  9999999999999999987542210


Q ss_pred             --------------------------eecCCCCcCcccCCCccc-CCCCCCchhHHHHHHHHHHHHHhC----------C
Q psy2787          75 --------------------------VMTERKPLPCPWCPMESL-KHNQFSQASDAWMFGVTIWEMFTF----------G  117 (251)
Q Consensus        75 --------------------------~~~~~~~~~~~y~aPE~~-~~~~~~~~~Di~S~G~il~el~~~----------g  117 (251)
                                                .......||+.|+|||++ .+..++.++|||||||++|||+++          |
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~  291 (458)
T 3rp9_A          212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR  291 (458)
T ss_dssp             CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGC
T ss_pred             cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccc
Confidence                                      122345679999999976 456799999999999999999972          4


Q ss_pred             CCCCCCCCh--------------------hHHHHHHHhc-C-----------------------CCC-----CCCCCCcH
Q psy2787         118 AEPWVGLNG--------------------MQILQKIDRE-G-----------------------ERL-----PRPEACPV  148 (251)
Q Consensus       118 ~~pf~~~~~--------------------~~~~~~i~~~-~-----------------------~~~-----~~~~~~~~  148 (251)
                      .++|.+.+.                    .+.+..+... +                       ...     ...+.++.
T Consensus       292 ~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  371 (458)
T 3rp9_A          292 GPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSA  371 (458)
T ss_dssp             CCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCH
T ss_pred             cccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCH
Confidence            555655331                    1111111100 0                       000     01245688


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ++.+|+.+||..||++|||+.++++|.+--
T Consensus       372 ~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~  401 (458)
T 3rp9_A          372 DAIHLLKRMLVFNPNKRITINECLAHPFFK  401 (458)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSGGGT
T ss_pred             HHHHHHHHHhccCccccCCHHHHhcCHhhh
Confidence            999999999999999999999999987643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.97  E-value=7.5e-32  Score=227.02  Aligned_cols=167  Identities=16%  Similarity=0.194  Sum_probs=129.7

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc------------------
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS------------------   54 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~------------------   54 (251)
                      .+||+ .+++.+.+....         ..++.|++.||+|||++||+||||||+|  |+++.                  
T Consensus        95 v~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N--il~~~~~~~~~~~~~~~~~~~~~  171 (339)
T 1z57_A           95 VFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPEN--ILFVQSDYTEAYNPKIKRDERTL  171 (339)
T ss_dssp             EEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEESCCCEEEEEC----CEEEEE
T ss_pred             EEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHH--EEEeccccccccCCccccccccc
Confidence            57787 566666554322         2346678899999999999999999999  88877                  


Q ss_pred             -CCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHH
Q psy2787          55 -SSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKI  133 (251)
Q Consensus        55 -~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i  133 (251)
                       ++.+||+|||+++.....    .....+|..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+
T Consensus       172 ~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~~  246 (339)
T 1z57_A          172 INPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL-GFTVFPTHDSKEHLAMM  246 (339)
T ss_dssp             SCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHH-SSCSCCCSCHHHHHHHH
T ss_pred             cCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Confidence             668999999999874432    234578899999999999899999999999999999999 99999887765544433


Q ss_pred             HhcCCCC------------------------------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHH
Q psy2787         134 DREGERL------------------------------------------PRPEACPVEVYALMRQCWSKNPAERPKFSTL  171 (251)
Q Consensus       134 ~~~~~~~------------------------------------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~i  171 (251)
                      .......                                          ..+...+.++.+++.+||+.||++|||+.++
T Consensus       247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el  326 (339)
T 1z57_A          247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA  326 (339)
T ss_dssp             HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence            2211000                                          0112345788999999999999999999999


Q ss_pred             HHHHH
Q psy2787         172 KDCLY  176 (251)
Q Consensus       172 l~~l~  176 (251)
                      ++|.+
T Consensus       327 l~hp~  331 (339)
T 1z57_A          327 LKHPF  331 (339)
T ss_dssp             TTSGG
T ss_pred             hcCHH
Confidence            98744

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.97  E-value=8.6e-32  Score=221.53  Aligned_cols=172  Identities=13%  Similarity=0.241  Sum_probs=136.4

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.++|.+.+...         ...++.|++.||.|||++||+||||||+|  |+++.++.+||+|||++.....
T Consensus        97 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~  174 (284)
T 2a19_B           97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSN--IFLVDTKQVKIGDFGLVTSLKN  174 (284)
T ss_dssp             EEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEEETTEEEECCCTTCEESSC
T ss_pred             EEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHH--EEEcCCCCEEECcchhheeccc
Confidence            357888888888766422         12345678899999999999999999999  9999999999999999987554


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..  ......+++.|+|||++.+..++.++||||||+++|+|++ |..|+...  ......+. .   ...+..++.++.
T Consensus       175 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-~~~~~~~~--~~~~~~~~-~---~~~~~~~~~~~~  245 (284)
T 2a19_B          175 DG--KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH-VCDTAFET--SKFFTDLR-D---GIISDIFDKKEK  245 (284)
T ss_dssp             CS--CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHS-CCSSHHHH--HHHHHHHH-T---TCCCTTSCHHHH
T ss_pred             cc--cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHh-cCCcchhH--HHHHHHhh-c---ccccccCCHHHH
Confidence            32  2334568889999999998889999999999999999999 88887432  22333332 2   123456889999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      +++.+||+.||++|||+.+++++|+.+.....
T Consensus       246 ~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          246 TLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             HHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence            99999999999999999999999998876543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.97  E-value=3.9e-32  Score=223.73  Aligned_cols=171  Identities=13%  Similarity=0.190  Sum_probs=136.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC----ceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS----SSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~----~~kl~DFGla~~~   69 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++    .+||+|||++...
T Consensus        85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~~~~~kl~dfg~~~~~  162 (283)
T 3bhy_A           85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPEN--IMLLDKNVPNPRIKLIDFGIAHKI  162 (283)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHH--EEEecCCCCCCceEEEecccceec
Confidence            357888877777765421       23456788899999999999999999999  9998777    8999999999875


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCc
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACP  147 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~  147 (251)
                      ....  ......+++.|+|||++.+..++.++||||||+++|+|++ |..||.+....+....+.......+  ....++
T Consensus       163 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T 3bhy_A          163 EAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGETKQETLTNISAVNYDFDEEYFSNTS  239 (283)
T ss_dssp             C----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCC
T ss_pred             cCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHH-CCCCCCCcchHHHHHHhHhcccCCcchhcccCC
Confidence            4332  2234568889999999998889999999999999999999 9999999887777776644333222  125688


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ..+.+++.+||..||++|||+.++++|.+
T Consensus       240 ~~~~~li~~~l~~dp~~Rps~~~~l~h~~  268 (283)
T 3bhy_A          240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSW  268 (283)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHCHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHhCHH
Confidence            89999999999999999999999999764

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.97  E-value=4.3e-32  Score=231.68  Aligned_cols=172  Identities=15%  Similarity=0.145  Sum_probs=132.5

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||+. ++|.+.....      ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++........
T Consensus       108 v~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N--Il~~~~~~~kl~Dfg~a~~~~~~~~~  184 (364)
T 3qyz_A          108 VQDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN--LLLNTTCDLKICDFGLARVADPDHDH  184 (364)
T ss_dssp             EEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCTTCEECCGGGCB
T ss_pred             EEcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHh--EEECCCCCEEEEeCcceEecCCCCCc
Confidence            466766 4666544322      22356788899999999999999999999  99999999999999999875432211


Q ss_pred             --ecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-------------
Q psy2787          76 --MTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-------------  139 (251)
Q Consensus        76 --~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-------------  139 (251)
                        ......+|+.|+|||++.+ ..++.++||||+||++|+|++ |..||.+....+....+......             
T Consensus       185 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  263 (364)
T 3qyz_A          185 TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLK  263 (364)
T ss_dssp             CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHH-SSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHH
T ss_pred             cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHH-CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence              2344578999999998654 458999999999999999999 99999887766555544321000             


Q ss_pred             -----------CC-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         140 -----------LP-----RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       140 -----------~~-----~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                 ..     ..+.++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~  317 (364)
T 3qyz_A          264 ARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL  317 (364)
T ss_dssp             HHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             HHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcch
Confidence                       00     114578899999999999999999999999998764

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.97  E-value=9e-32  Score=232.17  Aligned_cols=152  Identities=14%  Similarity=0.130  Sum_probs=123.1

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEc-cCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-CCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFF-SSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFS   98 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~   98 (251)
                      .++.|+++||+|||++||+||||||+|  |+++ .++.+||+|||+++......  ......+|+.|+|||++.+. .++
T Consensus       145 ~~~~qi~~aL~~LH~~~ivHrDlkp~N--ill~~~~~~~kL~DFG~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~  220 (394)
T 4e7w_A          145 LYMYQLLRSLAYIHSIGICHRDIKPQN--LLLDPPSGVLKLIDFGSAKILIAGE--PNVSYICSRYYRAPELIFGATNYT  220 (394)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCSGGG--EEEETTTTEEEECCCTTCEECCTTC--CCCSSCSCGGGCCHHHHTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHCCccCCCCCHHH--EEEcCCCCcEEEeeCCCcccccCCC--CCcccccCcCccCHHHHcCCCCCC
Confidence            356788999999999999999999999  9998 78999999999998754332  23345678899999998764 589


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-----------------CC----------CCCCCCcHHHH
Q psy2787          99 QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-----------------RL----------PRPEACPVEVY  151 (251)
Q Consensus        99 ~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-----------------~~----------~~~~~~~~~~~  151 (251)
                      .++||||+||++|||++ |..||.+.+..+....+.....                 ..          ..+..+++++.
T Consensus       221 ~~~DiwSlG~il~ell~-g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (394)
T 4e7w_A          221 TNIDIWSTGCVMAELMQ-GQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAI  299 (394)
T ss_dssp             THHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHH
T ss_pred             cHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHH
Confidence            99999999999999999 9999998876655544432100                 00          01245788999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||+.||++|||+.++++|.+-
T Consensus       300 ~li~~~L~~dP~~R~t~~e~l~hp~f  325 (394)
T 4e7w_A          300 DLISRLLEYTPSARLTAIEALCHPFF  325 (394)
T ss_dssp             HHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHHhCCChhhCCCHHHHhcChhh
Confidence            99999999999999999999998653

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.97  E-value=1e-31  Score=227.66  Aligned_cols=169  Identities=17%  Similarity=0.253  Sum_probs=128.7

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEE-------------------
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILF-------------------   52 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~-------------------   52 (251)
                      +.+||+. +++++.+...         ...++.|++.||+|||++||+||||||+|  |++                   
T Consensus        99 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~N--Ill~~~~~~~~~~~~~~~~~~~  175 (355)
T 2eu9_A           99 IAFELLG-KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN--ILFVNSEFETLYNEHKSCEEKS  175 (355)
T ss_dssp             EEEECCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG--EEESCCCEEEEECCC-CCCEEE
T ss_pred             EEEeccC-CChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EEEecccccccccccccccccc
Confidence            3578884 4444443322         12346688899999999999999999999  888                   


Q ss_pred             ccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHH
Q psy2787          53 FSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQK  132 (251)
Q Consensus        53 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~  132 (251)
                      +.++.+||+|||+++.....    .....+|..|+|||++.+..++.++||||+||++|||++ |..||.+....+....
T Consensus       176 ~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~  250 (355)
T 2eu9_A          176 VKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR-GFTLFQTHENREHLVM  250 (355)
T ss_dssp             ESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHH
T ss_pred             cCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHh-CCCCCCCCCHHHHHHH
Confidence            56789999999999864432    234578899999999999899999999999999999999 9999998776554443


Q ss_pred             HHhcCCCCC------------------------------------------CCCCCcHHHHHHHHHHhccCCCCCCCHHH
Q psy2787         133 IDREGERLP------------------------------------------RPEACPVEVYALMRQCWSKNPAERPKFST  170 (251)
Q Consensus       133 i~~~~~~~~------------------------------------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~  170 (251)
                      +.......+                                          .....+.++.+++.+||+.||++|||+.+
T Consensus       251 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e  330 (355)
T 2eu9_A          251 MEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAE  330 (355)
T ss_dssp             HHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHH
Confidence            322111100                                          01123457889999999999999999999


Q ss_pred             HHHHHHh
Q psy2787         171 LKDCLYR  177 (251)
Q Consensus       171 il~~l~~  177 (251)
                      +++|.+-
T Consensus       331 ~l~hp~f  337 (355)
T 2eu9_A          331 ALLHPFF  337 (355)
T ss_dssp             HTTSGGG
T ss_pred             HhcChhh
Confidence            9987653

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.97  E-value=2e-31  Score=222.70  Aligned_cols=174  Identities=16%  Similarity=0.261  Sum_probs=139.6

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.++|.+.....        ...++.+++.||.|||++||+||||||+|  |+++.++.+||+|||++......
T Consensus       101 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~kl~dfg~~~~~~~~  178 (314)
T 3com_A          101 IVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGN--ILLNTEGHAKLADFGVAGQLTDT  178 (314)
T ss_dssp             EEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTCCEEECCCTTCEECBTT
T ss_pred             EEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHH--EEECCCCCEEEeecccchhhhhh
Confidence            357888887877765421        12346778899999999999999999999  99999999999999999875443


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCCcHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~  151 (251)
                      .. ......++..|+|||++.+..++.++||||||+++|+|++ |..||.+.........+.... .....+..++..+.
T Consensus       179 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  256 (314)
T 3com_A          179 MA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAE-GKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFT  256 (314)
T ss_dssp             BS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHH
T ss_pred             cc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHH
Confidence            22 2344578889999999998889999999999999999999 999998877655544443322 22233456789999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +++.+||..||++|||+.++++|.+-.
T Consensus       257 ~li~~~l~~dp~~Rpt~~~ll~~~~~~  283 (314)
T 3com_A          257 DFVKQCLVKSPEQRATATQLLQHPFVR  283 (314)
T ss_dssp             HHHHHHTCSCTTTSCCHHHHTTSHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHhCHHHh
Confidence            999999999999999999999986543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.97  E-value=5e-32  Score=231.96  Aligned_cols=168  Identities=13%  Similarity=0.143  Sum_probs=129.7

Q ss_pred             cccccchhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           2 SANFAELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      .+||+. ++|.+.....     ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....    
T Consensus       125 v~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N--Ill~~~~~~kL~Dfg~a~~~~~~----  197 (371)
T 4exu_A          125 VMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAE----  197 (371)
T ss_dssp             EEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTCCEEECSTTCC----------
T ss_pred             EEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHH--eEECCCCCEEEEecCcccccccC----
Confidence            467777 5666655432     22356688899999999999999999999  99999999999999999865432    


Q ss_pred             cCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC---------------
Q psy2787          77 TERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL---------------  140 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~---------------  140 (251)
                      .....+|+.|+|||++.+ ..++.++||||+||++|+|++ |..||.+.+..+....+......+               
T Consensus       198 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  276 (371)
T 4exu_A          198 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT-GKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS  276 (371)
T ss_dssp             --CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHH
T ss_pred             cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhh
Confidence            234567889999999887 678999999999999999999 999999887666555443211110               


Q ss_pred             --------C------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         141 --------P------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       141 --------~------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                              +      ..+.+++++.+++.+||+.||++|||+.++++|.+-
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  327 (371)
T 4exu_A          277 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF  327 (371)
T ss_dssp             HHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred             hhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcCccc
Confidence                    0      124578899999999999999999999999998664

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.97  E-value=1e-31  Score=234.65  Aligned_cols=172  Identities=15%  Similarity=0.172  Sum_probs=125.6

Q ss_pred             CcccccchhHHHHHhcCCC--------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-----------
Q psy2787           1 MSANFAELNAFQENYTEPC--------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-----------   55 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-----------   55 (251)
                      +++||++ ++|.+.+....              ..++.|++.||+|||++||+||||||+|  |+++.+           
T Consensus        86 lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~N--ILl~~~~~~~~~~~~~~  162 (434)
T 2rio_A           86 IALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQN--ILVSTSSRFTADQQTGA  162 (434)
T ss_dssp             EEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEEECCHHHHSCCTTCC
T ss_pred             EEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHh--EEEecCcccccccccCC
Confidence            4678886 57777654321              1257788999999999999999999999  888643           


Q ss_pred             --CceEEccCCCCcccCCCcee---ecCCCCcCcccCCCcccCC-------CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy2787          56 --SSSSSGDFGMMRYSQNDCYV---MTERKPLPCPWCPMESLKH-------NQFSQASDAWMFGVTIWEMFTFGAEPWVG  123 (251)
Q Consensus        56 --~~~kl~DFGla~~~~~~~~~---~~~~~~~~~~y~aPE~~~~-------~~~~~~~Di~S~G~il~el~~~g~~pf~~  123 (251)
                        +.+||+|||+++........   ......||+.|+|||++.+       ..++.++|||||||++|||++.|..||.+
T Consensus       163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~  242 (434)
T 2rio_A          163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD  242 (434)
T ss_dssp             CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence              48999999999875543211   2234578999999999875       56889999999999999999868999976


Q ss_pred             CChhHHHHHHHhcCCCCCC-----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         124 LNGMQILQKIDREGERLPR-----PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       124 ~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ....+  ..+.......+.     +..++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       243 ~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f  299 (434)
T 2rio_A          243 KYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF  299 (434)
T ss_dssp             TTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             chhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCcc
Confidence            54433  222233222221     12346789999999999999999999999988654

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.97  E-value=1.1e-31  Score=228.45  Aligned_cols=152  Identities=21%  Similarity=0.159  Sum_probs=122.8

Q ss_pred             CCchhhHHhhhhh--hCCcccCCCCCCCceEEEcc-CCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCC-C
Q psy2787          22 PLPPERRGYGTFS--VNNICSCQFSSSSLLILFFS-SSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQ-F   97 (251)
Q Consensus        22 ~~~~~~~gl~~lH--~~~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~   97 (251)
                      ++.|++.||+|||  ++||+||||||+|  |+++. ++.+||+|||+++......  ......+|..|+|||++.+.. +
T Consensus       134 ~~~qi~~al~~lH~~~~~ivH~Dlkp~N--Ill~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~  209 (360)
T 3e3p_A          134 FLFQLIRSIGCLHLPSVNVCHRDIKPHN--VLVNEADGTLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHY  209 (360)
T ss_dssp             HHHHHHHHHHHHTSTTTCCBCSCCCGGG--EEEETTTTEEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSC
T ss_pred             HHHHHHHHHHHHhCCCCCeecCcCCHHH--EEEeCCCCcEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCC
Confidence            4667889999999  9999999999999  99986 8999999999998755432  233456788999999987654 8


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC------------------------------CCCCCCCc
Q psy2787          98 SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER------------------------------LPRPEACP  147 (251)
Q Consensus        98 ~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~------------------------------~~~~~~~~  147 (251)
                      +.++|||||||++|+|++ |..||.+.+.......+......                              ...+...+
T Consensus       210 ~~~~Di~slG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (360)
T 3e3p_A          210 TTAVDIWSVGCIFAEMML-GEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDA  288 (360)
T ss_dssp             CTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTH
T ss_pred             CcHHHHHHHHHHHHHHHh-CCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhcccc
Confidence            999999999999999999 99999988776665555331100                              01122367


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .++.+++.+||+.||++|||+.++++|.+--
T Consensus       289 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~  319 (360)
T 3e3p_A          289 KEAYDLLSALLQYLPEERMKPYEALCHPYFD  319 (360)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHTTSGGGG
T ss_pred             HHHHHHHHHHhccCccccCCHHHHhcCcccc
Confidence            8999999999999999999999999986643

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.97  E-value=5e-32  Score=224.70  Aligned_cols=172  Identities=16%  Similarity=0.189  Sum_probs=140.7

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus       101 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~kl~dfg~~~~~~~~~  178 (298)
T 1phk_A          101 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN--ILLDDDMNIKLTDFGFSCQLDPGE  178 (298)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCCEEECCCTTCEECCTTC
T ss_pred             EEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcce--EEEcCCCcEEEecccchhhcCCCc
Confidence            357888888887765432       23456778899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccC------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CC
Q psy2787          74 YVMTERKPLPCPWCPMESLK------HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EA  145 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~------~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~  145 (251)
                        ......++..|+|||++.      ...++.++||||||+++|+|++ |..||.+....+....+.......+.+  ..
T Consensus       179 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (298)
T 1phk_A          179 --KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD  255 (298)
T ss_dssp             --CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCCCCCTTTGGG
T ss_pred             --ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHH-CCCCCcCccHHHHHHHHhcCCcccCcccccc
Confidence              234456888999999885      4567899999999999999999 999999888777777776655444333  46


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       256 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~  287 (298)
T 1phk_A          256 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF  287 (298)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHHhChHh
Confidence            88999999999999999999999999987553

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.97  E-value=1.4e-31  Score=221.47  Aligned_cols=173  Identities=19%  Similarity=0.200  Sum_probs=134.1

Q ss_pred             cccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-CCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-SSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-~~~~kl~DFGla~~~~   70 (251)
                      .+||++.++|.+......          ..++.|++.||+|||++||+||||||+|  |+++. ++.+||+|||++....
T Consensus        97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~~kl~Dfg~~~~~~  174 (295)
T 2clq_A           97 FMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDN--VLINTYSGVLKISDFGTSKRLA  174 (295)
T ss_dssp             EEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEEETTTCCEEECCTTTCEESC
T ss_pred             EEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhh--EEEECCCCCEEEeecccccccC
Confidence            578887777777654321          1235678899999999999999999999  99987 8899999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCC--CCchhHHHHHHHHHHHHHhCCCCCCCCCChhH-HHHHHHhcCCCCCCCCCCc
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQ--FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ-ILQKIDREGERLPRPEACP  147 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~  147 (251)
                      ... .......++..|+|||++.+..  ++.++||||||+++|+|++ |..||.+..... ...........+..+..++
T Consensus       175 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (295)
T 2clq_A          175 GIN-PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMAT-GKPPFYELGEPQAAMFKVGMFKVHPEIPESMS  252 (295)
T ss_dssp             C------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHH-TSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSC
T ss_pred             CCC-CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHH-CCCCccCCCchhHHHHhhccccccccccccCC
Confidence            322 1234457888999999987643  7899999999999999999 999997643322 2222223344556667899


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .++.+++.+||+.||++|||+.+++++-+-.
T Consensus       253 ~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~  283 (295)
T 2clq_A          253 AEAKAFILKCFEPDPDKRACANDLLVDEFLK  283 (295)
T ss_dssp             HHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence            9999999999999999999999999876543

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.97  E-value=9.5e-32  Score=226.64  Aligned_cols=177  Identities=22%  Similarity=0.272  Sum_probs=132.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||++.+.+.......       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus       101 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~  178 (331)
T 4aaa_A          101 LVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPEN--ILVSQSGVVKLCDFGFARTLAAPG  178 (331)
T ss_dssp             EEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTSCEEECCCTTC-------
T ss_pred             EEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChhe--EEEcCCCcEEEEeCCCceeecCCc
Confidence            357888888777754322       22456788899999999999999999999  999999999999999998754332


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc----------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE----------------  136 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~----------------  136 (251)
                      . ......++..|+|||++.+. .++.++||||+||++|+|++ |..||.+....+....+...                
T Consensus       179 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (331)
T 4aaa_A          179 E-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFM-GEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP  256 (331)
T ss_dssp             ------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred             c-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence            1 23345678899999999875 68899999999999999999 99999987765544433211                


Q ss_pred             ---CCCCCC----------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         137 ---GERLPR----------PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       137 ---~~~~~~----------~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                         +...+.          .+.++..+.+++.+||+.||++|||+.++++|.+--...
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred             ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccCC
Confidence               111110          135788999999999999999999999999987755443

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.97  E-value=2.3e-31  Score=225.43  Aligned_cols=171  Identities=16%  Similarity=0.264  Sum_probs=137.7

Q ss_pred             CcccccchhHHHHH------hcCC---------CCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCC
Q psy2787           1 MSANFAELNAFQEN------YTEP---------CRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFG   64 (251)
Q Consensus         1 ~~~e~~~l~~l~~~------~~~~---------~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFG   64 (251)
                      +.+||++.++|.+.      ....         ...++.|++.||+|||+ +||+||||||+|  |+++.++.+||+|||
T Consensus       120 lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~N--il~~~~~~~kl~dfg  197 (348)
T 2pml_X          120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSN--ILMDKNGRVKLSDFG  197 (348)
T ss_dssp             EEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGG--EEECTTSCEEECCCT
T ss_pred             EEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHh--EEEcCCCcEEEeccc
Confidence            35788888888776      4332         11245677899999999 999999999999  999999999999999


Q ss_pred             CCcccCCCceeecCCCCcCcccCCCcccCCC-CCCc-hhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCC
Q psy2787          65 MMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFSQ-ASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLP  141 (251)
Q Consensus        65 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~-~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~  141 (251)
                      ++......   ......++..|+|||++.+. .++. ++||||+|+++|+|++ |..||.+... .+....+.......+
T Consensus       198 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~i~~~~~~~~  273 (348)
T 2pml_X          198 ESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY-NVVPFSLKISLVELFNNIRTKNIEYP  273 (348)
T ss_dssp             TCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHH-SSCSSCCSSCSHHHHHHHTSCCCCCC
T ss_pred             cccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHhccCcCCc
Confidence            99875544   33456788999999999877 5665 9999999999999999 9999988766 666666644333322


Q ss_pred             CC-----------------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         142 RP-----------------EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       142 ~~-----------------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ..                 ..++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f  326 (348)
T 2pml_X          274 LDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL  326 (348)
T ss_dssp             CSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGG
T ss_pred             cchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccc
Confidence            11                 5688999999999999999999999999998654

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.97  E-value=4.5e-32  Score=223.36  Aligned_cols=166  Identities=15%  Similarity=0.171  Sum_probs=130.5

Q ss_pred             CcccccchhHHHHHhcCC-----------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc---------------
Q psy2787           1 MSANFAELNAFQENYTEP-----------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS---------------   54 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~---------------   54 (251)
                      +.+||++.++|.+.+...           ...++.|++.||+|||++||+||||||+|  |+++.               
T Consensus        88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~N--Il~~~~~~~~~~~~~~~~~~  165 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSN--IFISRTSIPNAASEEGDEDD  165 (289)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEC----------------
T ss_pred             EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHH--EEEcCCCCCccccccccccc
Confidence            357898877777755421           23456788899999999999999999999  88874               


Q ss_pred             ----CCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHH
Q psy2787          55 ----SSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQI  129 (251)
Q Consensus        55 ----~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~  129 (251)
                          ...+||+|||++......     ....+|..|+|||++.+. .++.++||||||+++|+|++ |..++....   .
T Consensus       166 ~~~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-~~~~~~~~~---~  236 (289)
T 1x8b_A          166 WASNKVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAG-AEPLPRNGD---Q  236 (289)
T ss_dssp             ----CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTT-CCCCCSSSH---H
T ss_pred             ccCCceEEEEcccccccccCCc-----cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhc-CCCCCcchh---H
Confidence                447999999999875543     234588899999999865 56689999999999999999 887765432   2


Q ss_pred             HHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         130 LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       130 ~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      ...+ ..+.....+..++.++.+++.+||+.||++|||+.++++|.+-.
T Consensus       237 ~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  284 (289)
T 1x8b_A          237 WHEI-RQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLL  284 (289)
T ss_dssp             HHHH-HTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC-
T ss_pred             HHHH-HcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhh
Confidence            3333 34445566778999999999999999999999999999886543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.97  E-value=2.1e-31  Score=226.44  Aligned_cols=168  Identities=13%  Similarity=0.141  Sum_probs=128.1

Q ss_pred             cccccchhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           2 SANFAELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      .+||+. ++|.+.....     ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++.....    
T Consensus       107 v~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~N--Il~~~~~~~kl~Dfg~~~~~~~~----  179 (353)
T 3coi_A          107 VMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCELKILDFGLARHADAE----  179 (353)
T ss_dssp             EEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGG--EEECTTCCEEECSTTCTTC--------
T ss_pred             Eecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHH--EeECCCCcEEEeecccccCCCCC----
Confidence            456666 4555544322     12356688899999999999999999999  99999999999999999864432    


Q ss_pred             cCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC------------------
Q psy2787          77 TERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG------------------  137 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~------------------  137 (251)
                      .....+|..|+|||++.+ ..++.++||||+|+++|+|++ |..||.+.+..+....+....                  
T Consensus       180 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  258 (353)
T 3coi_A          180 MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT-GKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKS  258 (353)
T ss_dssp             ----CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHH-SSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHH
T ss_pred             ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHH
Confidence            234567889999999876 678899999999999999999 999998877655444432210                  


Q ss_pred             --------CC---CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         138 --------ER---LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       138 --------~~---~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                              ..   ......++.++.+++.+||..||++|||+.++++|.+-
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f  309 (353)
T 3coi_A          259 YIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF  309 (353)
T ss_dssp             HHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGG
T ss_pred             HHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence                    00   11224678999999999999999999999999998664

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.97  E-value=3.3e-31  Score=227.69  Aligned_cols=169  Identities=17%  Similarity=0.155  Sum_probs=129.8

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhh--hCCcccCCCCCCCceEEEc--cCCceEEccCCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFS--VNNICSCQFSSSSLLILFF--SSSSSSSGDFGMMR   67 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH--~~~iiHrdlkp~ni~il~~--~~~~~kl~DFGla~   67 (251)
                      +.+||++ ++|.+.+....         ..++.|++.||.|||  ..||+||||||+|  |+++  .++.+||+|||+++
T Consensus       133 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~N--Ill~~~~~~~~kL~DFG~a~  209 (382)
T 2vx3_A          133 LVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPEN--ILLCNPKRSAIKIVDFGSSC  209 (382)
T ss_dssp             EEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGG--EEESSTTSCCEEECCCTTCE
T ss_pred             EEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCccc--EEEecCCCCcEEEEeccCce
Confidence            3567776 36666554322         235667889999999  4789999999999  8884  57789999999998


Q ss_pred             ccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC------
Q psy2787          68 YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP------  141 (251)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~------  141 (251)
                      .....    .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+.+..+....+......++      
T Consensus       210 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  284 (382)
T 2vx3_A          210 QLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT-GEPLFSGANEVDQMNKIVEVLGIPPAHILDQ  284 (382)
T ss_dssp             ETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred             ecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            76443    234578889999999999899999999999999999999 9999998877666655543111000      


Q ss_pred             ----------------------------CCCC----------------------------CcHHHHHHHHHHhccCCCCC
Q psy2787         142 ----------------------------RPEA----------------------------CPVEVYALMRQCWSKNPAER  165 (251)
Q Consensus       142 ----------------------------~~~~----------------------------~~~~~~~li~~cl~~dP~~R  165 (251)
                                                  .++.                            ...++.+|+.+||+.||++|
T Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R  364 (382)
T 2vx3_A          285 APKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTR  364 (382)
T ss_dssp             CTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTS
T ss_pred             hHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhC
Confidence                                        0000                            01378999999999999999


Q ss_pred             CCHHHHHHHHHh
Q psy2787         166 PKFSTLKDCLYR  177 (251)
Q Consensus       166 ps~~~il~~l~~  177 (251)
                      ||+.++++|.+-
T Consensus       365 pta~e~L~hp~f  376 (382)
T 2vx3_A          365 IQPYYALQHSFF  376 (382)
T ss_dssp             CCHHHHTTSGGG
T ss_pred             CCHHHHhcCccc
Confidence            999999998654

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.97  E-value=7e-32  Score=227.01  Aligned_cols=172  Identities=12%  Similarity=0.129  Sum_probs=130.8

Q ss_pred             CcccccchhHHHHHhcCC----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCcccCCCcee
Q psy2787           1 MSANFAELNAFQENYTEP----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~~~~~~~   75 (251)
                      +.+||++.++|.+.....    ...++.|++.||+|||++||+||||||+|  |+++.++ .+||+|||+++......  
T Consensus       110 lv~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N--il~~~~~~~~kl~Dfg~a~~~~~~~--  185 (330)
T 3nsz_A          110 LVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQ--  185 (330)
T ss_dssp             EEEECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEEETTTTEEEECCCTTCEECCTTC--
T ss_pred             EEEeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH--EEEcCCCCEEEEEeCCCceEcCCCC--
Confidence            357888888888765431    23456788899999999999999999999  9998777 89999999998754432  


Q ss_pred             ecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCC-ChhHHHHHH-------------HhcCCCC
Q psy2787          76 MTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQKI-------------DREGERL  140 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~-~~~~~~~~i-------------~~~~~~~  140 (251)
                      ......++..|+|||++.+ ..++.++||||+||++|+|++ |..||... ...+....+             .......
T Consensus       186 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~-g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  264 (330)
T 3nsz_A          186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF-RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL  264 (330)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-TCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred             ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHh-CCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhcccc
Confidence            2344578888999999877 668999999999999999999 99999543 222222111             1111100


Q ss_pred             ----------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         141 ----------------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       141 ----------------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                            ..+..++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f  323 (330)
T 3nsz_A          265 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF  323 (330)
T ss_dssp             CTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGG
T ss_pred             ccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccH
Confidence                                  1112378999999999999999999999999998653

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.97  E-value=1.2e-31  Score=224.27  Aligned_cols=155  Identities=18%  Similarity=0.304  Sum_probs=119.8

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce-eecCCCCcCcccCCCcccCC-----
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY-VMTERKPLPCPWCPMESLKH-----   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-----   94 (251)
                      .++.|++.||+|||+++|+||||||+|  |+++ ++.+||+|||+++....... .......+++.|+|||++.+     
T Consensus       131 ~i~~qi~~aL~~LH~~~ivH~dlkp~N--Il~~-~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  207 (313)
T 3cek_A          131 SYWKNMLEAVHTIHQHGIVHSDLKPAN--FLIV-DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR  207 (313)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGG--EEEE-TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC---
T ss_pred             HHHHHHHHHHHHHHHCCceecCCCccc--EEEE-CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhccccc
Confidence            346788899999999999999999999  8885 58999999999987543321 12334568999999999875     


Q ss_pred             ------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCC
Q psy2787          95 ------NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK  167 (251)
Q Consensus        95 ------~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps  167 (251)
                            ..++.++||||||+++|+|++ |..||.+... ......+.........+..++.++.+++.+||+.||++|||
T Consensus       208 ~~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  286 (313)
T 3cek_A          208 ENGKSKSKISPKSDVWSLGCILYYMTY-GKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS  286 (313)
T ss_dssp             -------CCCHHHHHHHHHHHHHHHHH-SSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC
T ss_pred             ccccccccCCchHHHHHHHHHHHHHHh-CCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcC
Confidence                  467889999999999999999 9999987543 33344444455555666778899999999999999999999


Q ss_pred             HHHHHHHHHhhc
Q psy2787         168 FSTLKDCLYRLT  179 (251)
Q Consensus       168 ~~~il~~l~~~~  179 (251)
                      +.+++++.+...
T Consensus       287 ~~ell~h~~~~~  298 (313)
T 3cek_A          287 IPELLAHPYVQI  298 (313)
T ss_dssp             HHHHHTSHHHHC
T ss_pred             HHHHhcCccccC
Confidence            999999876543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.97  E-value=1.4e-31  Score=228.07  Aligned_cols=170  Identities=14%  Similarity=0.121  Sum_probs=126.5

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++ +++.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus       112 v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~N--Il~~~~~~~kl~Dfg~~~~~~~~~  188 (362)
T 3pg1_A          112 VTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGN--ILLADNNDITICDFNLAREDTADA  188 (362)
T ss_dssp             EEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTCCEEECCTTC--------
T ss_pred             EEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHH--EEEcCCCCEEEEecCccccccccc
Confidence            578888 67777655432        2345678899999999999999999999  999999999999999998643322


Q ss_pred             eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL------------  140 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~------------  140 (251)
                        ......+|..|+|||++.+ ..++.++||||+||++|+|++ |..||.+....+....+......+            
T Consensus       189 --~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  265 (362)
T 3pg1_A          189 --NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN-RKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPS  265 (362)
T ss_dssp             ---------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHH
T ss_pred             --ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchh
Confidence              2334567888999999876 678999999999999999999 999999877666555543211100            


Q ss_pred             ------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         141 ------------------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       141 ------------------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                        ...+.+++.+.+++.+||+.||++|||+.++++|.+-
T Consensus       266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f  320 (362)
T 3pg1_A          266 ARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYF  320 (362)
T ss_dssp             HHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             hhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchh
Confidence                              0124567889999999999999999999999998653

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.97  E-value=3e-32  Score=228.03  Aligned_cols=176  Identities=15%  Similarity=0.218  Sum_probs=133.6

Q ss_pred             cccccchhHHHHHhcC---C--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccC
Q psy2787           2 SANFAELNAFQENYTE---P--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~---~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~   70 (251)
                      .+||++.++|.+.+..   .        ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||++....
T Consensus       108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~N--Il~~~~~~~kl~dfg~~~~~~  185 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTN--ILLGDEGQPVLMDLGSMNQAC  185 (317)
T ss_dssp             EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTSCEEECCCSSCEESC
T ss_pred             EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH--EEEcCCCCEEEEecCcchhcc
Confidence            5788888777765442   1        12346678899999999999999999999  999999999999999987643


Q ss_pred             CCcee--------ecCCCCcCcccCCCcccCCCC---CCchhHHHHHHHHHHHHHhCCCCCCCCCC--hhHHHHHHHhcC
Q psy2787          71 NDCYV--------MTERKPLPCPWCPMESLKHNQ---FSQASDAWMFGVTIWEMFTFGAEPWVGLN--GMQILQKIDREG  137 (251)
Q Consensus        71 ~~~~~--------~~~~~~~~~~y~aPE~~~~~~---~~~~~Di~S~G~il~el~~~g~~pf~~~~--~~~~~~~i~~~~  137 (251)
                      .....        ......+|..|+|||++.+..   ++.++||||||+++|+|++ |..||....  .......+ ...
T Consensus       186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~-g~~p~~~~~~~~~~~~~~~-~~~  263 (317)
T 2buj_A          186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF-GEGPYDMVFQKGDSVALAV-QNQ  263 (317)
T ss_dssp             EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHH-SSCTTHHHHHTTSCHHHHH-HCC
T ss_pred             cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHh-CCCChhhhhcccchhhHHh-hcc
Confidence            21100        011234588899999987654   6889999999999999999 999995421  11122222 334


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ...+.+..++.++.+++.+||+.||.+|||+.+++++|+.+.+.
T Consensus       264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence            44555667899999999999999999999999999999887644

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.97  E-value=3.5e-31  Score=218.67  Aligned_cols=153  Identities=20%  Similarity=0.295  Sum_probs=114.9

Q ss_pred             CCCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCccc----CCC
Q psy2787          21 KPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESL----KHN   95 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~   95 (251)
                      .++.|++.||+|||++ ||+||||||+|  |+++.++.+||+|||+++......  ......+|+.|+|||++    .+.
T Consensus       113 ~i~~qi~~~l~~lH~~~~i~H~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~  188 (290)
T 3fme_A          113 KIAVSIVKALEHLHSKLSVIHRDVKPSN--VLINALGQVKMCDFGISGYLVDDV--AKDIDAGCKPYMAPERINPELNQK  188 (290)
T ss_dssp             HHHHHHHHHHHHHHHHSCCCCCCCSGGG--CEECTTCCEEBCCC-----------------CCCCCCSCHHHHSCCTTC-
T ss_pred             HHHHHHHHHHHHHhhcCCeecCCCCHHH--EEECCCCCEEEeecCCcccccccc--cccccCCCccccChhhcChhhcCc
Confidence            3567888999999998 99999999999  999999999999999998754432  22334688899999996    456


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCC-hhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787          96 QFSQASDAWMFGVTIWEMFTFGAEPWVGLN-GMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus        96 ~~~~~~Di~S~G~il~el~~~g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                      .++.++||||+|+++|+|++ |..||.+.. .................+..++.++.+++.+||+.||++|||+.++++|
T Consensus       189 ~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~h  267 (290)
T 3fme_A          189 GYSVKSDIWSLGITMIELAI-LRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQH  267 (290)
T ss_dssp             -CCHHHHHHHHHHHHHHHHH-TSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred             CCCcHHHHHHHHHHHHHHHH-CCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhC
Confidence            78899999999999999999 999998633 3333444434444444446789999999999999999999999999998


Q ss_pred             HHhh
Q psy2787         175 LYRL  178 (251)
Q Consensus       175 l~~~  178 (251)
                      .+-.
T Consensus       268 p~f~  271 (290)
T 3fme_A          268 PFFT  271 (290)
T ss_dssp             HHHH
T ss_pred             cccc
Confidence            7654

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.97  E-value=2e-31  Score=226.25  Aligned_cols=172  Identities=15%  Similarity=0.123  Sum_probs=129.9

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||+. ++|.+.....      ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++........
T Consensus        92 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~N--il~~~~~~~kl~Dfg~a~~~~~~~~~  168 (353)
T 2b9h_A           92 IQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSN--LLINSNCDLKVCDFGLARIIDESAAD  168 (353)
T ss_dssp             EECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEECTTCCEEECCCTTCEECC-----
T ss_pred             EEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHH--eEEcCCCcEEEEeccccccccccccc
Confidence            467776 4666654321      22356788899999999999999999999  99999999999999999875432111


Q ss_pred             ---------ecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC------
Q psy2787          76 ---------MTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER------  139 (251)
Q Consensus        76 ---------~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~------  139 (251)
                               ......||..|+|||++.+ ..++.++||||+||++|+|++ |..||.+.+..+....+......      
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T 2b9h_A          169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIFGIIGTPHSDND  247 (353)
T ss_dssp             -----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCSTTT
T ss_pred             ccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCchhcc
Confidence                     1223467899999998764 678999999999999999999 99999987765544333211000      


Q ss_pred             ------------------CC------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         140 ------------------LP------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       140 ------------------~~------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                        .+      ..+.++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  309 (353)
T 2b9h_A          248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL  309 (353)
T ss_dssp             TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccc
Confidence                              00      014678899999999999999999999999998664

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=2.4e-31  Score=227.11  Aligned_cols=172  Identities=9%  Similarity=-0.009  Sum_probs=132.5

Q ss_pred             CcccccchhHHHHHhcC-------C-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-----------CCc
Q psy2787           1 MSANFAELNAFQENYTE-------P-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-----------SSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-----------~~~   57 (251)
                      |.+||++.++|.+.+..       .     +..++.|+++||+|||++||+||||||+|  |+++.           ++.
T Consensus       144 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~N--Ill~~~~~~~~~~~~~~~~  221 (365)
T 3e7e_A          144 LVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDN--FILGNGFLEQDDEDDLSAG  221 (365)
T ss_dssp             EEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGG--EEECGGGTCC------CTT
T ss_pred             EEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHH--EEecccccCccccccccCC
Confidence            46899999888886642       1     22356788899999999999999999999  99988           899


Q ss_pred             eEEccCCCCcccC-CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQ-NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~-~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+|+... ...........||..|+|||++.+..++.++|||||||++|||++ |+.||........     ..
T Consensus       222 ~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ellt-g~~pf~~~~~~~~-----~~  295 (365)
T 3e7e_A          222 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLF-GTYMKVKNEGGEC-----KP  295 (365)
T ss_dssp             EEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHH-SSCCCEEEETTEE-----EE
T ss_pred             EEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHh-CCCccccCCCCce-----ee
Confidence            9999999997633 122234456678999999999999999999999999999999999 9999954322110     00


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCC-CCHHHHHHHHHhhcHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAER-PKFSTLKDCLYRLTPA  181 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~R-ps~~~il~~l~~~~~~  181 (251)
                      ..... ....+..+.+++..|++.+|.+| |++.++.+.|......
T Consensus       296 ~~~~~-~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~  340 (365)
T 3e7e_A          296 EGLFR-RLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ  340 (365)
T ss_dssp             CSCCT-TCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             chhcc-ccCcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence            01111 11346788899999999999999 5778888877776554

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.97  E-value=2e-31  Score=232.50  Aligned_cols=174  Identities=14%  Similarity=0.155  Sum_probs=123.8

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-----CCceEEccCCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-----SSSSSSGDFGMMR   67 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-----~~~~kl~DFGla~   67 (251)
                      +++||+. ++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.     ...+||+|||+++
T Consensus        95 lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~N--Ill~~~~~~~~~~~kL~DFG~a~  171 (432)
T 3p23_A           95 IAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHN--ILISMPNAHGKIKAMISDFGLCK  171 (432)
T ss_dssp             EEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTS--EEECCCBTTTBCCEEECCTTEEE
T ss_pred             EEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHH--EEEecCCCCCceeEEEeccccee
Confidence            3578887 57777665432        2346688899999999999999999999  88843     3368899999998


Q ss_pred             ccCCCc--eeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-C
Q psy2787          68 YSQNDC--YVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-P  141 (251)
Q Consensus        68 ~~~~~~--~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-~  141 (251)
                      ......  ........||+.|+|||++.   ...++.++||||+||++|||++.|..||...........+....... .
T Consensus       172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~  251 (432)
T 3p23_A          172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLH  251 (432)
T ss_dssp             CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSC
T ss_pred             eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccC
Confidence            754332  12334567899999999998   35677899999999999999997888996654443332221111111 1


Q ss_pred             CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         142 RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       142 ~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .+...+..+.+++.+||+.||++|||+.++++|.+-
T Consensus       252 ~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f  287 (432)
T 3p23_A          252 PEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF  287 (432)
T ss_dssp             TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTT
T ss_pred             ccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccc
Confidence            123345668899999999999999999999988654

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.97  E-value=1.5e-31  Score=228.78  Aligned_cols=149  Identities=15%  Similarity=0.144  Sum_probs=113.4

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCC-CCCCch
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH-NQFSQA  100 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~  100 (251)
                      ++.|+++||+|||++||+||||||+|  |+++.++.+||+|||+++.....    .....+|..|+|||++.+ ..++.+
T Consensus       137 i~~qi~~aL~~LH~~givH~Dlkp~N--Ill~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~  210 (367)
T 2fst_X          137 LIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNWMHYNQT  210 (367)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTCCEEECC-------------------CCCTTCCHHHHTTCCSCCTT
T ss_pred             HHHHHHHHHHHHHHCCeeeCCCCHhh--EEECCCCCEEEeecccccccccc----CCCcCcCcCccChHHHcCCcCCCch
Confidence            56688899999999999999999999  99999999999999999875432    234567889999999886 678999


Q ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC------------------------CCC-----CCCCcHHHH
Q psy2787         101 SDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER------------------------LPR-----PEACPVEVY  151 (251)
Q Consensus       101 ~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~------------------------~~~-----~~~~~~~~~  151 (251)
                      +||||+||++|||++ |+.||.+.+..+....+......                        ...     ...+++.+.
T Consensus       211 ~DiwslG~il~ell~-g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (367)
T 2fst_X          211 VDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAV  289 (367)
T ss_dssp             HHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHH
T ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHH
Confidence            999999999999999 99999988776655544321000                        000     135678899


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +|+.+||..||++|||+.++++|.+-
T Consensus       290 dLl~~mL~~dP~~R~t~~e~L~hp~~  315 (367)
T 2fst_X          290 DLLEKMLVLDSDKRITAAQALAHAYF  315 (367)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHhCCCCcccCcCHHHHhcChhh
Confidence            99999999999999999999998654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.97  E-value=3.9e-32  Score=233.71  Aligned_cols=168  Identities=12%  Similarity=0.147  Sum_probs=124.6

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCC--------------
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSS--------------   56 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~--------------   56 (251)
                      |.+||+. +++++.+...         ...++.|++.||+|||++ ||+||||||+|  |+++.++              
T Consensus       122 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~N--Ill~~~~~~~~~~~~~~~~~~  198 (397)
T 1wak_A          122 MVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPEN--ILLSVNEQYIRRLAAEATEWQ  198 (397)
T ss_dssp             EEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGG--EEECCCHHHHHHHHHHHC---
T ss_pred             EEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH--eeEeccchhhhhhhhhhHHHh
Confidence            3567874 3444433221         233567888999999998 99999999999  9988665              


Q ss_pred             -----------------------------------ceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchh
Q psy2787          57 -----------------------------------SSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQAS  101 (251)
Q Consensus        57 -----------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  101 (251)
                                                         .+||+|||+++.....    .....+|..|+|||++.+..++.++
T Consensus       199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~  274 (397)
T 1wak_A          199 RSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEVLIGSGYNTPA  274 (397)
T ss_dssp             ------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHHHHTSCCCTHH
T ss_pred             hcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChhhcCCCCCcHH
Confidence                                               7999999999875432    3345788999999999998899999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCh------hHHHHHHHh-cCCC-----------------------------------
Q psy2787         102 DAWMFGVTIWEMFTFGAEPWVGLNG------MQILQKIDR-EGER-----------------------------------  139 (251)
Q Consensus       102 Di~S~G~il~el~~~g~~pf~~~~~------~~~~~~i~~-~~~~-----------------------------------  139 (251)
                      |||||||++|||++ |..||.+.+.      ......+.. .+..                                   
T Consensus       275 DiwslG~il~ellt-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (397)
T 1wak_A          275 DIWSTACMAFELAT-GDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEV  353 (397)
T ss_dssp             HHHHHHHHHHHHHH-SSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHH
T ss_pred             HHHHHHHHHHHHhh-CCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHh
Confidence            99999999999999 9999976442      111221111 0000                                   


Q ss_pred             ----CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 ----LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 ----~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                          ...+...+..+.+|+.+||+.||++|||+.++++|.+
T Consensus       354 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~  394 (397)
T 1wak_A          354 LVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPW  394 (397)
T ss_dssp             HHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGG
T ss_pred             hhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcc
Confidence                0111223567889999999999999999999998764

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.97  E-value=1.6e-31  Score=223.42  Aligned_cols=172  Identities=16%  Similarity=0.179  Sum_probs=131.4

Q ss_pred             cccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc-cCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF-SSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~-~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||++ ++|.+.....      ...++.|++.||+|||++||+||||||+|  |+++ .++.+||+|||+++.......
T Consensus       100 v~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~~kl~Dfg~~~~~~~~~~  176 (320)
T 2i6l_A          100 VQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN--LFINTEDLVLKIGDFGLARIMDPHYS  176 (320)
T ss_dssp             EEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGG--EEEETTTTEEEECCCTTCBCC-----
T ss_pred             EeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHH--EEEcCCCCeEEEccCccccccCCCcc
Confidence            578887 5777766532      12346688899999999999999999999  9997 567999999999987543211


Q ss_pred             --eecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC------------
Q psy2787          75 --VMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER------------  139 (251)
Q Consensus        75 --~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~------------  139 (251)
                        .......++..|+|||++.+ ..++.++||||||+++|+|++ |..||.+....+....+......            
T Consensus       177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (320)
T 2i6l_A          177 HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLT-GKTLFAGAHELEQMQLILESIPVVHEEDRQELLSV  255 (320)
T ss_dssp             ---CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTT
T ss_pred             cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhc
Confidence              12233456888999998865 678999999999999999999 99999988766655554332111            


Q ss_pred             -----------CC-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         140 -----------LP-----RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       140 -----------~~-----~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                 ..     ....++.++.+++.+||+.||++|||+.++++|.+-
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  309 (320)
T 2i6l_A          256 IPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM  309 (320)
T ss_dssp             SCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHH
T ss_pred             CcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccc
Confidence                       00     124688999999999999999999999999988654

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.97  E-value=5.8e-32  Score=224.54  Aligned_cols=173  Identities=17%  Similarity=0.239  Sum_probs=130.4

Q ss_pred             CcccccchhHHHHHhcC---------------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCC
Q psy2787           1 MSANFAELNAFQENYTE---------------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGM   65 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~---------------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGl   65 (251)
                      +.+||++.++|.+.+..               ....++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+
T Consensus        90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~N--il~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN--ILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG--EEECTTCCEEECCCHH
T ss_pred             EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhh--EEEcCCCCEEEEeccc
Confidence            35788887777765542               112345678899999999999999999999  9999999999999999


Q ss_pred             CcccCCCc----eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC
Q psy2787          66 MRYSQNDC----YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL  140 (251)
Q Consensus        66 a~~~~~~~----~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~  140 (251)
                      +.......    ........+|+.|+|||++.+ ..++.++||||||+++|+|++ |..||.+.................
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~  246 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELAT-GAAPYHKYPPMKVLMLTLQNDPPS  246 (303)
T ss_dssp             HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHH-SSCTTTTSCGGGHHHHHHTSSCCC
T ss_pred             hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHh-CCCCCccCchhhHHHHHhccCCCc
Confidence            87643321    112234568889999999875 468899999999999999999 999998876655544433222111


Q ss_pred             --------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         141 --------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       141 --------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                              .....++.++.+++.+||+.||++|||+.++++|.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~  290 (303)
T 2vwi_A          247 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF  290 (303)
T ss_dssp             TTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTT
T ss_pred             cccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChh
Confidence                    122467889999999999999999999999998754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.97  E-value=2e-31  Score=220.21  Aligned_cols=170  Identities=16%  Similarity=0.269  Sum_probs=136.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC---CceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS---SSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~---~~~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.....       ...++.|++.||+|||++||+||||||+|  |+++.+   +.+||+|||++....
T Consensus        98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~N--Ilv~~~~~~~~~kL~Dfg~~~~~~  175 (287)
T 2wei_A           98 IVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPEN--ILLESKEKDCDIKIIDFGLSTCFQ  175 (287)
T ss_dssp             EEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEESCSSTTCCEEECSTTGGGTBC
T ss_pred             EEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhh--EEEecCCCcccEEEeccCcceeec
Confidence            357888888777654321       23456788899999999999999999999  888654   479999999998654


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCC--CCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  148 (251)
                      ...  ......++..|+|||++.+. ++.++||||+|+++|+|++ |..||.+.+..++...+.......+.+  ..++.
T Consensus       176 ~~~--~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (287)
T 2wei_A          176 QNT--KMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLS-GTPPFYGKNEYDILKRVETGKYAFDLPQWRTISD  251 (287)
T ss_dssp             CCS--SCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCH
T ss_pred             CCC--ccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCH
Confidence            332  22334578889999998764 8899999999999999999 999999988888777776554444333  56899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+++.+||..||++|||+.+++++.+
T Consensus       252 ~~~~li~~~l~~dp~~Rps~~ell~hp~  279 (287)
T 2wei_A          252 DAKDLIRKMLTFHPSLRITATQCLEHPW  279 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHSHH
T ss_pred             HHHHHHHHHcccChhhCcCHHHHhcCHH
Confidence            9999999999999999999999999754

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.97  E-value=9.3e-32  Score=232.19  Aligned_cols=175  Identities=15%  Similarity=0.183  Sum_probs=134.1

Q ss_pred             CcccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEE----ccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILF----FSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~----~~~~~~kl~DFGla   66 (251)
                      +.+||++.++|.+.+....          ..++.|++.||+|||++||+||||||+|  |++    +.++.+||+|||++
T Consensus        86 lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N--Ill~~~~~~~~~~kL~DFG~a  163 (396)
T 4eut_A           86 LIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGN--IMRVIGEDGQSVYKLTDFGAA  163 (396)
T ss_dssp             EEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEEEECTTSCEEEEECCGGGC
T ss_pred             EEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHH--EEEeecCCCceeEEEecCCCc
Confidence            4689999999988776532          2245677899999999999999999999  776    66678999999999


Q ss_pred             cccCCCceeecCCCCcCcccCCCcccCC--------CCCCchhHHHHHHHHHHHHHhCCCCCCCCC----ChhHHHHHHH
Q psy2787          67 RYSQNDCYVMTERKPLPCPWCPMESLKH--------NQFSQASDAWMFGVTIWEMFTFGAEPWVGL----NGMQILQKID  134 (251)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~--------~~~~~~~Di~S~G~il~el~~~g~~pf~~~----~~~~~~~~i~  134 (251)
                      +......  ......+|..|+|||++.+        ..++.++|||||||++|||++ |..||...    ...+....+.
T Consensus       164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~t-g~~Pf~~~~~~~~~~~~~~~~~  240 (396)
T 4eut_A          164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT-GSLPFRPFEGPRRNKEVMYKII  240 (396)
T ss_dssp             EECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHH-SSCSEECTTCTTTCHHHHHHHH
T ss_pred             eEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCcccchHHHHHHHh
Confidence            8754432  2334578999999999864        456789999999999999999 99999642    2344555554


Q ss_pred             hcCCC-------------------CCC----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         135 REGER-------------------LPR----PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       135 ~~~~~-------------------~~~----~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .....                   .+.    +..++..+.+++.+||+.||++||++.++++.+..+..
T Consensus       241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            33221                   111    12245678899999999999999999999999877654

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.97  E-value=3.7e-31  Score=222.10  Aligned_cols=176  Identities=12%  Similarity=0.116  Sum_probs=134.7

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc---eEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS---SSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~---~kl~DFGla~~~~   70 (251)
                      +.+||++.++|.+.+....       ..++.|++.||+|||++||+||||||+|  |+++.++.   +||+|||+++...
T Consensus        91 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~N--Il~~~~~~~~~~kl~Dfg~~~~~~  168 (322)
T 2ycf_A           91 IVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPEN--VLLSSQEEDCLIKITDFGHSKILG  168 (322)
T ss_dssp             EEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEESSSSSSCCEEECCCTTCEECC
T ss_pred             EEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHH--EEEecCCCCCeEEEccCccceecc
Confidence            3679998888888765432       2245678899999999999999999999  99987654   9999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccC---CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh-HHHHHHHhcCCCCC--CCC
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLK---HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM-QILQKIDREGERLP--RPE  144 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~---~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~-~~~~~i~~~~~~~~--~~~  144 (251)
                      ....  .....+|..|+|||++.   ...++.++|||||||++|+|++ |..||.+.... .+...+........  ...
T Consensus       169 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (322)
T 2ycf_A          169 ETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLS-GYPPFSEHRTQVSLKDQITSGKYNFIPEVWA  245 (322)
T ss_dssp             CCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHH-SSCSSCSTTCSSCHHHHHHHTCCCCCHHHHT
T ss_pred             cccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHh-CCCCCcccchHHHHHHHHHhCccccCchhhh
Confidence            4321  12345788899999974   4568899999999999999999 99999765432 33344433322221  125


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .++.++.+++.+||..||++|||+.++++|.+-....
T Consensus       246 ~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             hcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHH
Confidence            6889999999999999999999999999987654433

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.97  E-value=1.7e-31  Score=221.90  Aligned_cols=171  Identities=20%  Similarity=0.267  Sum_probs=133.5

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.....        ...++.+++.||.|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        94 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~kl~Dfg~~~~~~~~~  171 (302)
T 2j7t_A           94 MIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGN--VLMTLEGDIRLADFGVSAKNLKTL  171 (302)
T ss_dssp             EEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG--EEECTTSCEEECCCHHHHHHHHHH
T ss_pred             EEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHH--EEECCCCCEEEEECCCCccccccc
Confidence            57888888777654321        22346678899999999999999999999  999999999999999876422111


Q ss_pred             eeecCCCCcCcccCCCccc-----CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-CCCCCCCc
Q psy2787          74 YVMTERKPLPCPWCPMESL-----KHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-LPRPEACP  147 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~-----~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~  147 (251)
                       .......++..|+|||++     .+..++.++||||||+++|+|++ |..||.+.+.......+...... ...+..++
T Consensus       172 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (302)
T 2j7t_A          172 -QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQ-IEPPHHELNPMRVLLKIAKSDPPTLLTPSKWS  249 (302)
T ss_dssp             -HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSC
T ss_pred             -cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhc-CCCCCccCCHHHHHHHHhccCCcccCCccccC
Confidence             112345678899999998     45678899999999999999999 99999988777666655443322 23346688


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .++.+++.+||+.||++|||+.++++|.+
T Consensus       250 ~~l~~li~~~l~~dp~~Rps~~~ll~h~~  278 (302)
T 2j7t_A          250 VEFRDFLKIALDKNPETRPSAAQLLEHPF  278 (302)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHTTSTT
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhcChH
Confidence            99999999999999999999999998754

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.97  E-value=3.7e-31  Score=226.07  Aligned_cols=169  Identities=12%  Similarity=0.107  Sum_probs=123.5

Q ss_pred             cccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhC-CcccCCCCCCCceEEEc------cCCceEEccCCC
Q psy2787           2 SANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVN-NICSCQFSSSSLLILFF------SSSSSSSGDFGM   65 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~------~~~~~kl~DFGl   65 (251)
                      .+||+ .++|.+.+....         ..++.|++.||+|||++ ||+||||||+|  |+++      ..+.+||+|||+
T Consensus       108 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~N--Ill~~~~~~~~~~~~kl~Dfg~  184 (373)
T 1q8y_A          108 VFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPEN--VLMEIVDSPENLIQIKIADLGN  184 (373)
T ss_dssp             EECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGG--EEEEEEETTTTEEEEEECCCTT
T ss_pred             EEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHH--eEEeccCCCcCcceEEEccccc
Confidence            46776 566666544321         23456888999999998 99999999999  8874      334799999999


Q ss_pred             CcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh------hHHHHHHHh-cCC
Q psy2787          66 MRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG------MQILQKIDR-EGE  138 (251)
Q Consensus        66 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~------~~~~~~i~~-~~~  138 (251)
                      ++.....    .....+|+.|+|||++.+..++.++|||||||++|||++ |..||.+...      .+....+.. .+.
T Consensus       185 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  259 (373)
T 1q8y_A          185 ACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT-GDFLFEPDEGHSYTKDDDHIAQIIELLGE  259 (373)
T ss_dssp             CEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHH-SSCCC---------CHHHHHHHHHHHHCS
T ss_pred             ccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHh-CCCCCCCCcccccCChHHHHHHHHHhcCC
Confidence            9875432    234578899999999999889999999999999999999 9999976431      111111111 000


Q ss_pred             ---------------------------------------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         139 ---------------------------------------RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       139 ---------------------------------------~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                                                             ....+..++.++.+++.+||+.||++|||+.++++|.+-.
T Consensus       260 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  338 (373)
T 1q8y_A          260 LPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLK  338 (373)
T ss_dssp             CCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGT
T ss_pred             CCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhh
Confidence                                                   0112234567889999999999999999999999987643

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.97  E-value=6.3e-31  Score=227.57  Aligned_cols=156  Identities=15%  Similarity=0.146  Sum_probs=113.4

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEE----ccCCceEEccCCCCcccCCCc--eeecCCCCcCcccCCCcccCC
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILF----FSSSSSSSGDFGMMRYSQNDC--YVMTERKPLPCPWCPMESLKH   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~----~~~~~~kl~DFGla~~~~~~~--~~~~~~~~~~~~y~aPE~~~~   94 (251)
                      .++.|++.||+|||++||+||||||+|  |++    +.++.+||+|||+++......  ........||+.|+|||++.+
T Consensus       132 ~i~~qi~~al~~LH~~~ivH~Dlkp~N--Ill~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  209 (405)
T 3rgf_A          132 SLLYQILDGIHYLHANWVLHRDLKPAN--ILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLG  209 (405)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTT
T ss_pred             HHHHHHHHHHHHHHhCCEeCCCcCHHH--eEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcC
Confidence            456788999999999999999999999  888    677899999999998754322  123345678999999999987


Q ss_pred             C-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChh---------HHHHHHHhc-CCCCC----------------------
Q psy2787          95 N-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM---------QILQKIDRE-GERLP----------------------  141 (251)
Q Consensus        95 ~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~---------~~~~~i~~~-~~~~~----------------------  141 (251)
                      . .++.++||||+||++|+|++ |..||.+....         +....+... +....                      
T Consensus       210 ~~~~~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~  288 (405)
T 3rgf_A          210 ARHYTKAIDIWAIGCIFAELLT-SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRN  288 (405)
T ss_dssp             CCSCCHHHHHHHHHHHHHHHHH-SSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGG
T ss_pred             CCcccchhhhHHHHHHHHHHHh-CCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhcccc
Confidence            4 48999999999999999999 99999765431         222222111 11100                      


Q ss_pred             -------------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         142 -------------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       142 -------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                                   .....+..+.+|+.+||..||++|||+.++++|.+-..
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~  339 (405)
T 3rgf_A          289 TYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLE  339 (405)
T ss_dssp             GGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTS
T ss_pred             CCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhcc
Confidence                         00112568899999999999999999999999987654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.96  E-value=1.1e-30  Score=216.49  Aligned_cols=171  Identities=14%  Similarity=0.191  Sum_probs=125.7

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||++.++|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||++.......
T Consensus        93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~N--il~~~~~~~kl~dfg~~~~~~~~~  170 (303)
T 1zy4_A           93 QMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMN--IFIDESRNVKIGDFGLAKNVHRSL  170 (303)
T ss_dssp             EEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTSCEEECCCCCCSCTTC--
T ss_pred             EEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHh--EEEcCCCCEEEeeCcchhhccccc
Confidence            578888888887664321        2356788899999999999999999999  999999999999999998654221


Q ss_pred             -------------eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCC-CChhHHHHHHHhcCC
Q psy2787          74 -------------YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVG-LNGMQILQKIDREGE  138 (251)
Q Consensus        74 -------------~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~-~~~~~~~~~i~~~~~  138 (251)
                                   ........++..|+|||++.+. .++.++||||+|+++|+|++    ||.. ....+....+.....
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~----p~~~~~~~~~~~~~~~~~~~  246 (303)
T 1zy4_A          171 DILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY----PFSTGMERVNILKKLRSVSI  246 (303)
T ss_dssp             -----------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS----CCSSHHHHHHHHHHHHSTTC
T ss_pred             chhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh----ccCCchhHHHHHHhcccccc
Confidence                         1122345688899999999864 68999999999999999998    4533 223344444433222


Q ss_pred             C--CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         139 R--LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       139 ~--~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .  ...+...+..+.+++.+||+.||++|||+.++++|.+-.
T Consensus       247 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~  288 (303)
T 1zy4_A          247 EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLP  288 (303)
T ss_dssp             CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSC
T ss_pred             ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcC
Confidence            2  223456778899999999999999999999999987653

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.96  E-value=2.6e-30  Score=216.94  Aligned_cols=162  Identities=16%  Similarity=0.243  Sum_probs=127.2

Q ss_pred             cccccch-hHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc-cCCceEEccCCCCcccCCC
Q psy2787           2 SANFAEL-NAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF-SSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l-~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~-~~~~~kl~DFGla~~~~~~   72 (251)
                      .+|++.. ++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++ .++.+||+|||+++.....
T Consensus       126 v~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N--Ill~~~~~~~kL~Dfg~~~~~~~~  203 (320)
T 3a99_A          126 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN--ILIDLNRGELKLIDFGSGALLKDT  203 (320)
T ss_dssp             EEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEEETTTTEEEECCCTTCEECCSS
T ss_pred             EEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHH--EEEeCCCCCEEEeeCccccccccc
Confidence            3566543 5565544321       22356688899999999999999999999  9998 7789999999999876543


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                         ......+|..|+|||++.+..+ +.++||||||+++|||++ |..||....  .    +...  ....+..++.++.
T Consensus       204 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~-g~~pf~~~~--~----~~~~--~~~~~~~~~~~~~  271 (320)
T 3a99_A          204 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC-GDIPFEHDE--E----IIRG--QVFFRQRVSSECQ  271 (320)
T ss_dssp             ---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH-SSCSCCSHH--H----HHHC--CCCCSSCCCHHHH
T ss_pred             ---cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHH-CCCCCCChh--h----hhcc--cccccccCCHHHH
Confidence               2334568899999999887665 688999999999999999 999997532  1    1122  2234567899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +++.+||+.||++|||+.+++++.+-
T Consensus       272 ~li~~~l~~dp~~Rps~~~ll~hp~~  297 (320)
T 3a99_A          272 HLIRWCLALRPSDRPTFEEIQNHPWM  297 (320)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHHccCChhhCcCHHHHhcCHhh
Confidence            99999999999999999999997653

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.96  E-value=1.7e-29  Score=211.18  Aligned_cols=152  Identities=18%  Similarity=0.327  Sum_probs=114.4

Q ss_pred             CCCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccC-----C
Q psy2787          21 KPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLK-----H   94 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~-----~   94 (251)
                      .++.+++.||+|||++ ||+||||||+|  |+++.++.+||+|||++.......  ......++..|+|||++.     .
T Consensus       128 ~~~~~i~~~l~~lH~~~~i~H~dlkp~N--il~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~  203 (318)
T 2dyl_A          128 KMTVAIVKALYYLKEKHGVIHRDVKPSN--ILLDERGQIKLCDFGISGRLVDDK--AKDRSAGCAAYMAPERIDPPDPTK  203 (318)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCCCCCCGGG--EEECTTSCEEECCCTTC----------------CCTTCCHHHHC------
T ss_pred             HHHHHHHHHHHHHHhhCCEEeCCCCHHH--EEECCCCCEEEEECCCchhccCCc--cccccCCCccccChhhcccccccc
Confidence            4567788999999995 99999999999  999999999999999997654332  223456888999999985     4


Q ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCC-ChhHHHHHHHhcCCC-CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHH
Q psy2787          95 NQFSQASDAWMFGVTIWEMFTFGAEPWVGL-NGMQILQKIDREGER-LPRPEACPVEVYALMRQCWSKNPAERPKFSTLK  172 (251)
Q Consensus        95 ~~~~~~~Di~S~G~il~el~~~g~~pf~~~-~~~~~~~~i~~~~~~-~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il  172 (251)
                      ..++.++||||||+++|+|++ |..||... ...+....+...... .+....++.++.+++.+||+.||.+|||+.+++
T Consensus       204 ~~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll  282 (318)
T 2dyl_A          204 PDYDIRADVWSLGISLVELAT-GQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL  282 (318)
T ss_dssp             --CCTHHHHHHHHHHHHHHHH-SSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHT
T ss_pred             cCCccccchhhHHHHHHHHHh-CCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            567899999999999999999 99999874 344555555443222 233346899999999999999999999999999


Q ss_pred             HHHHh
Q psy2787         173 DCLYR  177 (251)
Q Consensus       173 ~~l~~  177 (251)
                      +|.+-
T Consensus       283 ~h~~~  287 (318)
T 2dyl_A          283 EHSFI  287 (318)
T ss_dssp             TSHHH
T ss_pred             hCHHH
Confidence            87653

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.96  E-value=3.6e-30  Score=215.01  Aligned_cols=163  Identities=16%  Similarity=0.230  Sum_probs=128.6

Q ss_pred             cccc-cchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc-cCCceEEccCCCCcccCCC
Q psy2787           2 SANF-AELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF-SSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~-~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~-~~~~~kl~DFGla~~~~~~   72 (251)
                      .+|| +..++|.+.+...       ...++.|++.||+|||++||+||||||+|  |+++ .++.+||+|||+++.....
T Consensus       116 v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~~kl~dfg~~~~~~~~  193 (312)
T 2iwi_A          116 VLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDEN--ILIDLRRGCAKLIDFGSGALLHDE  193 (312)
T ss_dssp             EEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGG--EEEETTTTEEEECCCSSCEECCSS
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhh--EEEeCCCCeEEEEEcchhhhcccC
Confidence            3555 5566666654321       22356788899999999999999999999  9998 7899999999999876543


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCC-chhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFS-QASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~-~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .   .....++..|+|||++.+..+. .++||||+|+++|+|++ |..||.+..  +    +...  ....+..++.++.
T Consensus       194 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~-g~~pf~~~~--~----~~~~--~~~~~~~~~~~~~  261 (312)
T 2iwi_A          194 P---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVC-GDIPFERDQ--E----ILEA--ELHFPAHVSPDCC  261 (312)
T ss_dssp             C---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH-SSCSCCSHH--H----HHHT--CCCCCTTSCHHHH
T ss_pred             c---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHH-CCCCCCChH--H----Hhhh--ccCCcccCCHHHH
Confidence            2   3445688899999998876654 58999999999999999 999997532  1    2122  2344567899999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      +++.+||+.||++|||+.++++|.+-.
T Consensus       262 ~li~~~l~~~p~~Rps~~e~l~~~~~~  288 (312)
T 2iwi_A          262 ALIRRCLAPKPSSRPSLEEILLDPWMQ  288 (312)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHSTTTC
T ss_pred             HHHHHHccCChhhCcCHHHHhcChhhc
Confidence            999999999999999999999986643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.96  E-value=5.6e-30  Score=215.29  Aligned_cols=152  Identities=21%  Similarity=0.350  Sum_probs=101.5

Q ss_pred             CCCchhhHHhhhhhhC-CcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCccc----CCC
Q psy2787          21 KPLPPERRGYGTFSVN-NICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESL----KHN   95 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~-~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~----~~~   95 (251)
                      .++.+++.||.|||++ ||+||||||+|  |+++.++.+||+|||+++......  ......+|..|+|||++    .+.
T Consensus       129 ~i~~~i~~~l~~lH~~~~ivH~dlkp~N--Ill~~~~~~kl~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~  204 (327)
T 3aln_A          129 KITLATVKALNHLKENLKIIHRDIKPSN--ILLDRSGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMAPERIDPSASRQ  204 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHSCCCSCCCGGG--EEEETTTEEEECCCSSSCC-------------------------------
T ss_pred             HHHHHHHHHHHHHhccCCEeECCCCHHH--EEEcCCCCEEEccCCCceeccccc--ccccCCCCccccCceeeccccCcC
Confidence            3466778999999999 99999999999  999999999999999998754332  22334688899999998    455


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCCChh-HHHHHHHhcCCCCCC----CCCCcHHHHHHHHHHhccCCCCCCCHHH
Q psy2787          96 QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM-QILQKIDREGERLPR----PEACPVEVYALMRQCWSKNPAERPKFST  170 (251)
Q Consensus        96 ~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~-~~~~~i~~~~~~~~~----~~~~~~~~~~li~~cl~~dP~~Rps~~~  170 (251)
                      .++.++||||||+++|+|++ |..||.+.... +....+. .+..+..    ...++.++.+++.+||+.||++|||+.+
T Consensus       205 ~~~~~~Di~slG~il~~l~~-g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e  282 (327)
T 3aln_A          205 GYDVRSDVWSLGITLYELAT-GRFPYPKWNSVFDQLTQVV-KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKE  282 (327)
T ss_dssp             -CCSHHHHHHHHHHHHHHHH-SCCCSSCC-------CCCC-CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCchhhHHHHHHHHHHHHH-CCCCCCCcchHHHHHHHHh-cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHH
Confidence            68899999999999999999 99999875421 2222111 1111111    2458899999999999999999999999


Q ss_pred             HHHHHHhh
Q psy2787         171 LKDCLYRL  178 (251)
Q Consensus       171 il~~l~~~  178 (251)
                      ++++.+-.
T Consensus       283 ll~hp~~~  290 (327)
T 3aln_A          283 LLKHPFIL  290 (327)
T ss_dssp             HTTSHHHH
T ss_pred             HHhChHHH
Confidence            99886643

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.95  E-value=1.1e-28  Score=223.37  Aligned_cols=169  Identities=13%  Similarity=0.139  Sum_probs=124.4

Q ss_pred             CcccccchhHHHHHhcCCC----------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc---eEEccCCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC----------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS---SSSGDFGMMR   67 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~---~kl~DFGla~   67 (251)
                      +.+||++.++|.+......          ..++.+++.||+|||++||+||||||+|  |+++.++.   +||+|||++.
T Consensus        95 LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~N--ILl~~~g~~~~vKL~DFG~a~  172 (676)
T 3qa8_A           95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN--IVLQPGPQRLIHKIIDLGYAK  172 (676)
T ss_dssp             CEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTT--EEEECCSSSCEEEECSCCCCC
T ss_pred             EEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHH--eEeecCCCceeEEEccccccc
Confidence            4689998888888765422          2345677899999999999999999999  88886654   9999999998


Q ss_pred             ccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHH---------HHHHh---
Q psy2787          68 YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQIL---------QKIDR---  135 (251)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~---------~~i~~---  135 (251)
                      ......  ......+|..|+|||++.+..++.++||||+|+++|+|++ |..||.+.......         ..+..   
T Consensus       173 ~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLlt-G~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~  249 (676)
T 3qa8_A          173 ELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT-GFRPFLPNWQPVQWHGKVREKSNEHIVVYDD  249 (676)
T ss_dssp             BTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHS-SCSSCCSSCHHHHSSTTCC------CCSCCC
T ss_pred             cccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHH-CCCCCCcccchhhhhhhhhcccchhhhhhhh
Confidence            754432  2344678899999999999999999999999999999999 99999764221110         00000   


Q ss_pred             --c----CCCCC----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q psy2787         136 --E----GERLP----RPEACPVEVYALMRQCWSKNPAERPKFSTLKDC  174 (251)
Q Consensus       136 --~----~~~~~----~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~  174 (251)
                        .    ....+    ....++..+.+++.+||..||++|||+.++++|
T Consensus       250 l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~h  298 (676)
T 3qa8_A          250 LTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNV  298 (676)
T ss_dssp             CSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCC
T ss_pred             hccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcC
Confidence              0    00011    112367889999999999999999999886644

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.95  E-value=4.8e-28  Score=201.17  Aligned_cols=153  Identities=14%  Similarity=0.290  Sum_probs=115.1

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc---CCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS---SSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~---~~~~kl~DFGla~~   68 (251)
                      +.+||++.++|.+.+....         ..++.|++.||+|||++||+||||||+|  |+++.   ++.+||+|||++..
T Consensus        92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~N--il~~~~~~~~~~kl~Dfg~a~~  169 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN--LLYTSKRPNAILKLTDFGFAKE  169 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH--EEEecCCCCCcEEEeccccccc
Confidence            3689998888888765432         2345677899999999999999999999  99988   78999999999865


Q ss_pred             cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc--CCCCCCC---
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE--GERLPRP---  143 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~---  143 (251)
                      ...                       ..++.++||||+||++|+|++ |..||.+.........+...  ......+   
T Consensus       170 ~~~-----------------------~~~~~~~DiwslG~il~el~t-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (299)
T 3m2w_A          170 TTG-----------------------EKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  225 (299)
T ss_dssp             CTT-----------------------CGGGGHHHHHHHHHHHHHHHH-SSCSCCC-------CCSCCSSCTTCCSSCHHH
T ss_pred             ccc-----------------------ccCCchhhHHHHHHHHHHHHH-CCCCCCCCcchhhhHHHHHHHhhccccCCchh
Confidence            322                       236789999999999999999 99999776543322211111  1111112   


Q ss_pred             -CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         144 -EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       144 -~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                       ..++.++.+++.+||+.||++|||+.++++|.+-..
T Consensus       226 ~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~  262 (299)
T 3m2w_A          226 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  262 (299)
T ss_dssp             HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             cccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcc
Confidence             468899999999999999999999999999877543

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.94  E-value=7.9e-28  Score=220.89  Aligned_cols=162  Identities=10%  Similarity=0.011  Sum_probs=120.3

Q ss_pred             CcccccchhHHHHHhcCC-----CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           1 MSANFAELNAFQENYTEP-----CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      |++||++.++|.+.....     ...++.|++.||+|||++||+||||||+|  |+++.+ .+||+|||+++.....   
T Consensus       161 lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~N--Ill~~~-~~kl~DFG~a~~~~~~---  234 (681)
T 2pzi_A          161 IVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPEN--IMLTEE-QLKLIDLGAVSRINSF---  234 (681)
T ss_dssp             EEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECSS-CEEECCCTTCEETTCC---
T ss_pred             EEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHH--eEEeCC-cEEEEecccchhcccC---
Confidence            468898888887655432     12346778899999999999999999999  998875 8999999999875443   


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC-CCCCCcHHHHHHH
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP-RPEACPVEVYALM  154 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~li  154 (251)
                        ....||+.|+|||++.+.. +.++|||||||++|+|++ |..||.+....         ..... .....+..+.+++
T Consensus       235 --~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~-g~~~~~~~~~~---------~~~~~~~~~~~~~~l~~li  301 (681)
T 2pzi_A          235 --GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTL-DLPTRNGRYVD---------GLPEDDPVLKTYDSYGRLL  301 (681)
T ss_dssp             --SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHS-CCCEETTEECS---------SCCTTCHHHHHCHHHHHHH
T ss_pred             --CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHh-CCCCCcccccc---------cccccccccccCHHHHHHH
Confidence              4457899999999987654 889999999999999999 99888653211         00000 0012356899999


Q ss_pred             HHHhccCCCCCCC-HHHHHHHHHhhcHH
Q psy2787         155 RQCWSKNPAERPK-FSTLKDCLYRLTPA  181 (251)
Q Consensus       155 ~~cl~~dP~~Rps-~~~il~~l~~~~~~  181 (251)
                      .+||+.||++||+ ++++...+..+...
T Consensus       302 ~~~l~~dP~~R~~~~~~l~~~l~~~~~~  329 (681)
T 2pzi_A          302 RRAIDPDPRQRFTTAEEMSAQLTGVLRE  329 (681)
T ss_dssp             HHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred             hhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence            9999999999996 55555556555443

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.93  E-value=3e-27  Score=195.44  Aligned_cols=150  Identities=11%  Similarity=0.019  Sum_probs=115.4

Q ss_pred             CcccccchhHHHHHhcCCC-----CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           1 MSANFAELNAFQENYTEPC-----RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      |++||++.++|.+.+....     ..++.|++.||+|||++||+||||||+|  |+++.++.+||+++|           
T Consensus       108 lv~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~N--Ill~~~g~~kl~~~~-----------  174 (286)
T 3uqc_A          108 VVAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSR--VRVSIDGDVVLAYPA-----------  174 (286)
T ss_dssp             EEEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG--EEEETTSCEEECSCC-----------
T ss_pred             EEEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCccc--EEEcCCCCEEEEecc-----------
Confidence            4689999888888775421     2356788899999999999999999999  999999999998554           


Q ss_pred             ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHH---HHHhcCCCC--CCCCCCcHHH
Q psy2787          76 MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQ---KIDREGERL--PRPEACPVEV  150 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~---~i~~~~~~~--~~~~~~~~~~  150 (251)
                                |++|       ++.++|||||||++|||++ |+.||.+.+..+...   .........  .....++.++
T Consensus       175 ----------~~~~-------~~~~~Di~slG~il~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  236 (286)
T 3uqc_A          175 ----------TMPD-------ANPQDDIRGIGASLYALLV-NRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQI  236 (286)
T ss_dssp             ----------CCTT-------CCHHHHHHHHHHHHHHHHH-SEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHH
T ss_pred             ----------ccCC-------CCchhHHHHHHHHHHHHHH-CCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHH
Confidence                      3332       6899999999999999999 999998765432110   000111111  1235689999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      .+++.+||+.||++| |+.++++.|..+....
T Consensus       237 ~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          237 SAVAARSVQGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             HHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             HHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence            999999999999999 9999999998876543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.93  E-value=6.7e-28  Score=203.47  Aligned_cols=161  Identities=8%  Similarity=-0.029  Sum_probs=120.0

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhh-hCCcccCCCCCCCceEEEccCC-----------------
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFS-VNNICSCQFSSSSLLILFFSSS-----------------   56 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH-~~~iiHrdlkp~ni~il~~~~~-----------------   56 (251)
                      |++||++.|++++.+...      ...++.|++.||+||| ++||+||||||+|  ||++.++                 
T Consensus       139 lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~N--ILl~~~~~~~~~~~~~~~~~~~~~  216 (336)
T 2vuw_A          139 IVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGN--VLLKKTSLKKLHYTLNGKSSTIPS  216 (336)
T ss_dssp             EEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGG--EEEEECSCSEEEEEETTEEEEEEC
T ss_pred             EEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHH--EEEeccCCcceeeeccCccccccC
Confidence            468999888777765331      2345678889999999 9999999999999  8998887                 


Q ss_pred             ---ceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHH-HHHHHhCCCCCCCCCCh-hHHHH
Q psy2787          57 ---SSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT-IWEMFTFGAEPWVGLNG-MQILQ  131 (251)
Q Consensus        57 ---~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~i-l~el~~~g~~pf~~~~~-~~~~~  131 (251)
                         .+||+|||+|+.....      ...||+.|+|||++.+.. +.++||||++++ .+++++ |..||.+... .....
T Consensus       217 ~~~~vkL~DFG~a~~~~~~------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~-g~~p~~~~~~~~~~~~  288 (336)
T 2vuw_A          217 CGLQVSIIDYTLSRLERDG------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWG-EYHPYSNVLWLHYLTD  288 (336)
T ss_dssp             TTEEEEECCCTTCBEEETT------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTT-SCCTHHHHHHHHHHHH
T ss_pred             CCceEEEeeccccEecCCC------cEEEeecccChhhhcCCC-ccceehhhhhCCCCccccc-ccCCCcchhhhhHHHH
Confidence               8999999999875543      236888999999998766 899999998777 777888 9999954211 12223


Q ss_pred             HHHhcCCCC-CC----CCCCcHHHHHHHHHHhccCCCCCCCHHHHH-HHHH
Q psy2787         132 KIDREGERL-PR----PEACPVEVYALMRQCWSKNPAERPKFSTLK-DCLY  176 (251)
Q Consensus       132 ~i~~~~~~~-~~----~~~~~~~~~~li~~cl~~dP~~Rps~~~il-~~l~  176 (251)
                      .+....... ..    +..+++++.+|+.+||+.|     |+.+++ +|.+
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~  334 (336)
T 2vuw_A          289 KMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSL  334 (336)
T ss_dssp             HHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGG
T ss_pred             hhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCC
Confidence            332211111 11    1347789999999999977     899998 7643

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.87  E-value=1.9e-24  Score=194.24  Aligned_cols=111  Identities=11%  Similarity=-0.010  Sum_probs=76.9

Q ss_pred             CcccccchhHHHHHhcCCC----CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           1 MSANFAELNAFQENYTEPC----RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~----~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      |+|||++.++|.+.+...-    .+++.|++.||+|+|++|||||||||+|  ||++.+|.+||+|||+|+....... .
T Consensus       319 LVMEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeN--ILL~~dg~vKL~DFGlAr~~~~~~~-~  395 (569)
T 4azs_A          319 LVMEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWN--VMVDARQHARLIDFGSIVTTPQDCS-W  395 (569)
T ss_dssp             EEEECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGG--EEECTTSCEEECCCTTEESCC---C-C
T ss_pred             EEEecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHh--EEECCCCCEEEeecccCeeCCCCCc-c
Confidence            5799999999999776421    3467888999999999999999999999  9999999999999999987544322 2


Q ss_pred             cCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHh
Q psy2787          77 TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT  115 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~  115 (251)
                      ..+..||+.|||||++.+. +..++|+||+|++++++.+
T Consensus       396 ~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~  433 (569)
T 4azs_A          396 PTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQ  433 (569)
T ss_dssp             SHHHHHHHHHHHHHHC------------------CCCCT
T ss_pred             ccCceechhhccHHHhCCC-CCCcccccccccchhhhcc
Confidence            2345789999999999864 5678999999998877655

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.72  E-value=7.2e-20  Score=163.60  Aligned_cols=115  Identities=10%  Similarity=0.063  Sum_probs=96.5

Q ss_pred             CcccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee-----
Q psy2787           1 MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV-----   75 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~-----   75 (251)
                      |.+||++.++|.+.+.. ...++.|+++||+|||+++|+||||||+|  |+++.  .+||+|||+++........     
T Consensus       416 lVmE~~~ggsL~~~l~~-~~~i~~qi~~aL~~LH~~gIiHrDiKp~N--ILl~~--~~kL~DFGla~~~~~~~~~~~~~~  490 (540)
T 3en9_A          416 IMMSYINGKLAKDVIED-NLDIAYKIGEIVGKLHKNDVIHNDLTTSN--FIFDK--DLYIIDFGLGKISNLDEDKAVDLI  490 (540)
T ss_dssp             EEEECCCSEEHHHHSTT-CTHHHHHHHHHHHHHHHTTEECTTCCTTS--EEESS--SEEECCCTTCEECCCHHHHHHHHH
T ss_pred             EEEECCCCCCHHHHHHH-HHHHHHHHHHHHHHHHHCcCccCCCCHHH--EEECC--eEEEEECccCEECCCccccccchh
Confidence            46899999999998887 66788999999999999999999999999  99998  9999999999986543211     


Q ss_pred             -ecCCCCcCcccCCCcccCC--CCCCchhHHHHHHHHHHHHHhCCCCCC
Q psy2787          76 -MTERKPLPCPWCPMESLKH--NQFSQASDAWMFGVTIWEMFTFGAEPW  121 (251)
Q Consensus        76 -~~~~~~~~~~y~aPE~~~~--~~~~~~~Di~S~G~il~el~~~g~~pf  121 (251)
                       ......||+.|||||++..  ..|+..+|+||..+-..+.+. ++.+|
T Consensus       491 ~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~-~r~rY  538 (540)
T 3en9_A          491 VFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVE-RRARY  538 (540)
T ss_dssp             HHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH-TCSCC
T ss_pred             hhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-hcccc
Confidence             1234678999999999986  557788899999988888877 66665

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.50  E-value=4.2e-16  Score=128.24  Aligned_cols=76  Identities=13%  Similarity=-0.037  Sum_probs=61.5

Q ss_pred             CcccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCC
Q psy2787           1 MSANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERK   80 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~   80 (251)
                      +.+||++.++|.+........++.|++.||+|||++||+||||||+|  |+++ ++.+||+|||+|+..           
T Consensus       177 lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH~~giiHrDlkp~N--ILl~-~~~vkl~DFG~a~~~-----------  242 (282)
T 1zar_A          177 VLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYN--VLVS-EEGIWIIDFPQSVEV-----------  242 (282)
T ss_dssp             EEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTS--EEEE-TTEEEECCCTTCEET-----------
T ss_pred             EEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHHHCCCEeCCCCHHH--EEEE-CCcEEEEECCCCeEC-----------
Confidence            46899988888873333334577889999999999999999999999  9999 999999999998632           


Q ss_pred             CcCcccCCCcccC
Q psy2787          81 PLPCPWCPMESLK   93 (251)
Q Consensus        81 ~~~~~y~aPE~~~   93 (251)
                         ..++|||++.
T Consensus       243 ---~~~~a~e~l~  252 (282)
T 1zar_A          243 ---GEEGWREILE  252 (282)
T ss_dssp             ---TSTTHHHHHH
T ss_pred             ---CCCCHHHHHH
Confidence               2267888764

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.17  E-value=4.8e-12  Score=102.53  Aligned_cols=65  Identities=11%  Similarity=0.059  Sum_probs=50.6

Q ss_pred             Ccccccch-h----HHHHHhcC----CCCCCCchhhHHhhhhh-hCCcccCCCCCCCceEEEccCCceEEccCCCCccc
Q psy2787           1 MSANFAEL-N----AFQENYTE----PCRKPLPPERRGYGTFS-VNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l-~----~l~~~~~~----~~~~~~~~~~~gl~~lH-~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~   69 (251)
                      |.+||+.. |    .|.+....    ....++.|++.||.||| +.||+||||||+|  |+++.  .++|+|||+|...
T Consensus       145 lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~N--ILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          145 LLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYN--IMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             EEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTS--EEESS--SEEECCCTTCEET
T ss_pred             EEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHH--EEEcC--cEEEEECcccccC
Confidence            35788832 2    44443322    34457788999999999 9999999999999  99987  8999999999753

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.67  E-value=2.1e-09  Score=91.55  Aligned_cols=66  Identities=8%  Similarity=-0.021  Sum_probs=50.3

Q ss_pred             CcccccchhHHHHHhcC-CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC----------ceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTE-PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS----------SSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~----------~~kl~DFGla~~   68 (251)
                      +.|||++...+...... ....++.|++.||.+||++|||||||||.|  ||+++++          .+.|+||+-+..
T Consensus       188 LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~N--ILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          188 IVMSLVDALPMRQVSSVPDPASLYADLIALILRLAKHGLIHGDFNEFN--ILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             EEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTS--EEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             EEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHH--EEEeCCCCcccccccccceEEEEeCCccc
Confidence            35788877666553321 223456788999999999999999999999  8887776          378999986654

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=97.58  E-value=5e-06  Score=66.35  Aligned_cols=29  Identities=14%  Similarity=0.040  Sum_probs=25.0

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++|+|++|.|  |+++.++.+.|+|||.+.
T Consensus       185 ~l~HgDl~~~N--il~~~~~~~~liD~~~a~  213 (264)
T 1nd4_A          185 VVTHGDACLPN--IMVENGRFSGFIDCGRLG  213 (264)
T ss_dssp             EEECSSCCGGG--EEEETTEEEEECCCTTCE
T ss_pred             EEECCCCCCCc--EEEECCcEEEEEcchhcc
Confidence            39999999999  888877667899999865

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=97.50  E-value=1.1e-05  Score=64.68  Aligned_cols=30  Identities=17%  Similarity=0.090  Sum_probs=24.7

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      ..++|+|++|.|  |+++....+.|+||+.+.
T Consensus       183 ~~l~HgDl~~~N--il~~~~~~~~lIDwe~a~  212 (263)
T 3tm0_A          183 LVFSHGDLGDSN--IFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EEEECSSCCTTS--EEEETTEEEEECCCTTCE
T ss_pred             ceEECCCCCcCc--EEEECCcEEEEEEchhcc
Confidence            348999999999  888776667799998764

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=96.37  E-value=0.0021  Score=53.89  Aligned_cols=31  Identities=10%  Similarity=0.262  Sum_probs=26.1

Q ss_pred             CCcccCCCCCCCceEEEccCC--ceEEccCCCCcc
Q psy2787          36 NNICSCQFSSSSLLILFFSSS--SSSSGDFGMMRY   68 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~--~~kl~DFGla~~   68 (251)
                      ..++|+|+++.|  |+++.++  .+.|.||+.+..
T Consensus       216 ~~lvHgD~~~~N--il~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          216 TSIVHGDYRLDN--LMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             CEEECSSCSGGG--EEECSSSSCEEEECCCTTCEE
T ss_pred             ceEEeCCCCCCc--EEEeCCCCcEEEEECcccccc
Confidence            468999999999  9988765  368999998874

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.18  E-value=0.00044  Score=56.68  Aligned_cols=80  Identities=24%  Similarity=0.250  Sum_probs=47.8

Q ss_pred             CcccCCCCCCCceEEEcc--CCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccC----C-CCC---------Cch
Q psy2787          37 NICSCQFSSSSLLILFFS--SSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLK----H-NQF---------SQA  100 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~--~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~----~-~~~---------~~~  100 (251)
                      .++|+|++|.|  |+++.  ...+.|+||+.+........ ........ .-..|+...    . +..         ..-
T Consensus       192 ~~~HgD~~~~N--~l~~~~~~~~~~~iD~~~~~~~~~~~D-l~~~~~~~-~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~  267 (304)
T 3sg8_A          192 CLIHNDFSSDH--ILFDTEKNTICGIIDFGDAAISDPDND-FISLMEDD-EEYGMEFVSKILNHYKHKDIPTVLEKYRMK  267 (304)
T ss_dssp             EEECSCCCGGG--EEEETTTTEEEEECCCTTCEEECTTHH-HHTTCCTT-TSCCHHHHHHHHHHHTCSCHHHHHHHHHHH
T ss_pred             eeEeCCCCccc--EEEeCCCCCEEEEEeCCCCccCChHHH-HHHHHhhc-cccCHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence            58999999999  98887  55788999999875322110 00000000 001111111    0 011         122


Q ss_pred             hHHHHHHHHHHHHHhCCCCCC
Q psy2787         101 SDAWMFGVTIWEMFTFGAEPW  121 (251)
Q Consensus       101 ~Di~S~G~il~el~~~g~~pf  121 (251)
                      .+.|+++.++|.+.+ |..+|
T Consensus       268 ~~~~~l~~~~~~~~~-g~~~~  287 (304)
T 3sg8_A          268 EKYWSFEKIIYGKEY-GYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHHHHT-TCHHH
T ss_pred             HHHHHHHHHHHHHHc-CCHHH
Confidence            588999999999999 88766

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=96.08  E-value=0.053  Score=42.08  Aligned_cols=139  Identities=9%  Similarity=0.006  Sum_probs=77.7

Q ss_pred             ccchhHHHHHhcCCCC-----CCCchhhHHhhhh-hhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecC
Q psy2787           5 FAELNAFQENYTEPCR-----KPLPPERRGYGTF-SVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTE   78 (251)
Q Consensus         5 ~~~l~~l~~~~~~~~~-----~~~~~~~~gl~~l-H~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~   78 (251)
                      ...|.+.+..+.++..     ....|.+++|.-+ +.+.-..+=+.|..  |++..+|.+.+.+ +.+.           
T Consensus        32 ~vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~--i~l~~dG~V~f~~-~~s~-----------   97 (229)
T 2yle_A           32 ALSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQ--IRVWRDGAVTLAP-AADD-----------   97 (229)
T ss_dssp             EEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGG--EEEETTSCEEECC-C--------------
T ss_pred             cccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcc--eEEecCCceeccc-cccc-----------
Confidence            4566677776666542     1222333444333 11111123334567  8888899887663 1110           


Q ss_pred             CCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHh
Q psy2787          79 RKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCW  158 (251)
Q Consensus        79 ~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl  158 (251)
                        .....+.+||... ...+.+.=|||+|+++|.-+-+|..+-                    .+..+++++..||..|.
T Consensus        98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~--------------------eE~eLS~~LE~LL~~Mt  154 (229)
T 2yle_A           98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKEN--------------------EERELSPPLEQLIDHMA  154 (229)
T ss_dssp             -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTT--------------------EEECCCHHHHHHHHHHT
T ss_pred             --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcc--------------------cchhhCHHHHHHHHHHH
Confidence              1112367888764 344678889999999999988433221                    12346777777777776


Q ss_pred             cc-------------------------CCCCCCCHHHHHHHHHhhcH
Q psy2787         159 SK-------------------------NPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       159 ~~-------------------------dP~~Rps~~~il~~l~~~~~  180 (251)
                      .-                         .+..|+++++|++.-....+
T Consensus       155 ~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~C~~hl~  201 (229)
T 2yle_A          155 NTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKLCAAHLP  201 (229)
T ss_dssp             TCCC--------------------CCSCCCCCCSHHHHHHHHHTTSS
T ss_pred             hcccccccccccccccccccccccccccccCcCCHHHHHHHHHhhcc
Confidence            54                         35688999999987665443

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=95.87  E-value=0.0081  Score=38.52  Aligned_cols=46  Identities=33%  Similarity=0.743  Sum_probs=39.6

Q ss_pred             CCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      ...+.+..++.+.+++...+..||.|++.++.+.|.||.+.+..+.
T Consensus        32 ~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~nyV~~~~   77 (78)
T 1k1z_A           32 GGFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   77 (78)
T ss_dssp             CCCCCBCTTCEEEEEECCSSCSCEEEEETTTTEEEEECSTTEEESC
T ss_pred             CCccCCCCCCEEEEEEcCCCCCeEEEEECCCCCEEEEehHHeEECC
Confidence            4678889999999999876788999998888999999999887653

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=95.72  E-value=0.0078  Score=37.66  Aligned_cols=45  Identities=31%  Similarity=0.714  Sum_probs=38.6

Q ss_pred             CCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      ...+.+..++.+.+++...+..||.+++..+.+.|.||.+.+..+
T Consensus        24 ~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~   68 (70)
T 1gcq_C           24 GPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   68 (70)
T ss_dssp             SCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CCcCCcCCCCEEEEEeCCCCCCCeEEEeCCCCCEeEeehHHeEEC
Confidence            347888999999999986678999998888899999999988764

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=95.54  E-value=0.01  Score=48.94  Aligned_cols=30  Identities=13%  Similarity=0.252  Sum_probs=26.7

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      ..+||+|+.+.|  |+++.++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~N--il~~~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGN--TLLGENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTS--EEECGGGCEEECCCTTCE
T ss_pred             CceecCCCCccc--EEEeCCCcEEEEehhhcc
Confidence            579999999999  999877889999999764

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=95.46  E-value=0.013  Score=36.84  Aligned_cols=51  Identities=18%  Similarity=0.330  Sum_probs=42.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++...+..||.+++.++.+.|.||.+.+..+....
T Consensus        20 ~~~~eLs~~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~~~   70 (72)
T 1spk_A           20 NNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSGPS   70 (72)
T ss_dssp             SCSSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSSCC
T ss_pred             CCCCCCcCCCCCEEEEeEccCCCCcEEEEECCCCCEEEEehHHeEECCCCC
Confidence            345678889999999998756678999999888999999999988876543

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=95.24  E-value=0.022  Score=35.59  Aligned_cols=51  Identities=25%  Similarity=0.652  Sum_probs=42.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++...+..||.+++.++.+.|.||.+.+..+....
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   68 (71)
T 2jt4_A           18 ESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRDKK   68 (71)
T ss_dssp             SSTTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEETTTSS
T ss_pred             CCCCcccCCCCCEEEEEECCCCCCCEEEEECCCCCeEEechHHeEECCCcC
Confidence            345678889999999999765788999998888899999999998776544

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=95.15  E-value=0.013  Score=36.31  Aligned_cols=43  Identities=23%  Similarity=0.356  Sum_probs=37.0

Q ss_pred             cccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         197 KLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .+.+..++.+.++....+..||.+++.++.+.|.||.+.+..+
T Consensus        24 ~Lsf~~Gd~i~v~~~~~~~gW~~g~~~~~g~~G~fP~~yv~~l   66 (67)
T 3rnj_A           24 LLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVL   66 (67)
T ss_dssp             BCCBCTTCEEEECSSSCBTTEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CccCCCCCEEEEeeccCCCCCEEEEECCCCCEEEEEHHHeEEC
Confidence            4888999999998776677899999888999999999987654

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=95.15  E-value=0.014  Score=36.09  Aligned_cols=48  Identities=19%  Similarity=0.337  Sum_probs=39.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++...+..||.+++.++.+.|.||.+.+..+.
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   66 (67)
T 2kxc_A           19 SNKTLLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLLE   66 (67)
T ss_dssp             SCSSBCCBCTTCEEEESSSSCBTTEEEEEESSSCCEEEEEGGGEEESC
T ss_pred             CCCCCCcCCCCCEEEEeECCCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            345678889999999998656678999998888999999999887653

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=94.99  E-value=0.021  Score=34.37  Aligned_cols=46  Identities=24%  Similarity=0.645  Sum_probs=38.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++...+..||.+++.++.+.|.||.+.+..
T Consensus        14 ~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~   59 (60)
T 2v1q_A           14 ESQDELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEP   59 (60)
T ss_dssp             CSTTBCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CCCCCccCCCCCEEEEEeCCCCCCCEEEEECCCCCEEEEEHHHEEE
Confidence            3456788899999999987556789999988889999999987764

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=94.78  E-value=0.02  Score=35.32  Aligned_cols=46  Identities=26%  Similarity=0.550  Sum_probs=38.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      ..+..+.+..|+.+.+++... ..||.+.+.++.+.|.||.+.+..+
T Consensus        18 ~~~~ELs~~~Gd~i~v~~~~~-~gWw~g~~~~~g~~G~~P~nyVe~l   63 (65)
T 2lj0_A           18 QNDDELELRDGDIVDVMEKCD-DGWFVGTSRRTKQFGTFPGNYVKPL   63 (65)
T ss_dssp             SSTTBCCBCTTCEEEEEEECT-TSEEEEEETTTCCEEEEETTSEEEC
T ss_pred             CCcCCcCCCCCCEEEEeEeCC-CCEEEEEECCCCCEEEEehhHeEEE
Confidence            455678999999999887654 5799999888899999999988765

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=94.43  E-value=0.028  Score=34.06  Aligned_cols=47  Identities=19%  Similarity=0.337  Sum_probs=38.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++... ..||.+.+..+.+.|.||.+.+..+.
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~~~~g~~G~fP~~yv~~~~   61 (62)
T 2fpe_A           15 RHEDELELEVDDPLLVELQAE-DYWYEAYNMRTGARGVFPAYYAIEVT   61 (62)
T ss_dssp             SSTTBCCBCTTCEEEEEEECT-TSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             cCcCcCcCCCCCEEEEEEecC-CCEEEEEECCCCCEEEechHHEEECc
Confidence            345668888999999876544 67999998888999999999887764

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=94.43  E-value=0.032  Score=35.21  Aligned_cols=51  Identities=18%  Similarity=0.351  Sum_probs=41.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..|+.+.+++.. +..||.+.+.++.+.|.||.+.+..+..+-+
T Consensus        17 ~~~~eLs~~~Gd~i~v~~~~-~~gWw~g~~~~~g~~G~~P~~yv~~~~~~~~   67 (73)
T 2lcs_A           17 ENDNELRLAEGDIVFISYKH-GQGWLVAENESGSKTGLVPEEFVSYIQPELE   67 (73)
T ss_dssp             SSTTBCCBCTTCEEEEEEEE-TTTEEEEECTTSSCEEEEESTTEEECCSSCC
T ss_pred             CCCCccCCcCCCEEEEEEEc-CCCEEEEEECCCCCEEEeeHHHEEECCCCCC
Confidence            34567888999999988764 4579999998888999999999988766544

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=94.26  E-value=0.039  Score=32.91  Aligned_cols=46  Identities=28%  Similarity=0.439  Sum_probs=37.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++... ..||.+++.++.+.|.||.+.+..+
T Consensus        12 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~   57 (58)
T 1jo8_A           12 AEDNELTFVENDKIINIEFVD-DDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEECCS-SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCCCCcccCCCCEEEEEEecC-CCcEEEEECCCCCEEEechHHeEEC
Confidence            345678889999999888744 6799999988899999999877643

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=94.21  E-value=0.052  Score=34.50  Aligned_cols=54  Identities=19%  Similarity=0.385  Sum_probs=43.4

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCCCCcC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDIS  248 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  248 (251)
                      ....+.+..++.+.+++...+..||.+++. ..+.|.||.+.+..+.....+.++
T Consensus        23 ~~~eLs~~~Gd~i~v~~~~~~~gW~~g~~~-~g~~G~~P~~yv~~~~~~~~~~~~   76 (77)
T 2enm_A           23 GNNELTVTEGEIITVTNPNVGGGWLEGKNN-KGEQGLVPTDYVEILPNDGKDPFS   76 (77)
T ss_dssp             TSSBCCCCTTCEEEEEESCCSSSEEEEECT-TCCEEEEETTTEEEECCCCCCCCC
T ss_pred             CCCeecCCCCCEEEEeEccCCCCeEEEEEC-CCCEEEeehHHeEECCCCCCCCCC
Confidence            455788899999999988656789999965 488999999999988776665443

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=94.18  E-value=0.038  Score=33.48  Aligned_cols=44  Identities=34%  Similarity=0.687  Sum_probs=36.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++..  ..||.+++..+.+.|.||.+.+..
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~   61 (62)
T 2iim_A           18 SHDGDLGFEKGEQLRILEQS--GEWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             CSTTBCCBCTTCEEEEEECC--SSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CCCCCcCCCCCCEEEEEEcC--CCEEEEEECCCCCEEEEEHHHEEE
Confidence            34567888999999999885  479999987788999999987764

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.12  E-value=0.046  Score=33.96  Aligned_cols=50  Identities=24%  Similarity=0.496  Sum_probs=40.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++... ..||.+.+.++.+.|.||...+..+...+
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~-~gW~~g~~~~~g~~G~~P~~yv~~~~~~~   68 (70)
T 2ct3_A           19 QNEDELELREGDRVDVMQQCD-DGWFVGVSRRTQKFGTFPGNYVAPVSGPS   68 (70)
T ss_dssp             SSTTBCCBCTTEEEEEEEECS-SSCEEEEESSSCCEEEECTTTEEETTCSC
T ss_pred             CCcCCccCCCCCEEEEEEECC-CCEEEEEECCCCCEEEechHHeEECCCCC
Confidence            345578888999998888654 67999998888999999999998876544

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=94.06  E-value=0.031  Score=34.79  Aligned_cols=50  Identities=24%  Similarity=0.439  Sum_probs=41.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. +..||.+.+..+.+.|.||.+.+..+...+
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   68 (70)
T 2cuc_A           19 HRPEELDLQKGEGIRVLGKY-QDGWLKGLSLLTGRTGIFPSDYVIPVSGPS   68 (70)
T ss_dssp             CSTTBCCBCTTCEEEEEEEE-ETTEEEEEETTTCCEEEEEGGGCEECCCTT
T ss_pred             CCCCcCCCCCCCEEEEEEec-CCCeEEEEECCCCCEEEEchHHeEECcCCC
Confidence            34567888899999988775 367999998888999999999998876654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=94.06  E-value=0.032  Score=47.72  Aligned_cols=79  Identities=9%  Similarity=0.045  Sum_probs=44.8

Q ss_pred             hhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCC---CCCchhHHHHHHHHH
Q psy2787          34 SVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN---QFSQASDAWMFGVTI  110 (251)
Q Consensus        34 H~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~S~G~il  110 (251)
                      +...++|+|+++.|  |+++.++ ++|+||+.+...................|++|+.....   .-.....+.+....+
T Consensus       230 ~~~~liHGDl~~~N--il~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  306 (420)
T 2pyw_A          230 RAQALIHGDLHTGS--VMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQT  306 (420)
T ss_dssp             BCCEEECSCCSGGG--EEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHH
T ss_pred             CCCeEEecCCCCCc--EEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHH
Confidence            45679999999999  9888776 99999998875221100000000001235555443311   111234455677777


Q ss_pred             HHHHh
Q psy2787         111 WEMFT  115 (251)
Q Consensus       111 ~el~~  115 (251)
                      |+.+.
T Consensus       307 ~~~y~  311 (420)
T 2pyw_A          307 WNLFN  311 (420)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77665

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=94.02  E-value=0.033  Score=33.17  Aligned_cols=45  Identities=29%  Similarity=0.497  Sum_probs=37.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++... ..||.+++.++.+.|.||.+.+..
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~~-~gW~~g~~~~~g~~G~~P~~yv~~   57 (58)
T 1zuy_A           13 GSPSELPLKKGDVIYITREEP-SGWSLGKLLDGSKEGWVPTAYMKP   57 (58)
T ss_dssp             SCTTBCCBCTTCEEEEEEECT-TSEEEEEESSCSCEEEEEGGGEEC
T ss_pred             CCCCcCCCCCCCEEEEEEecC-CCeEEEEECCCCCEEEecHHHEEE
Confidence            345678889999999888764 679999998889999999987753

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=93.85  E-value=0.06  Score=32.27  Aligned_cols=45  Identities=24%  Similarity=0.565  Sum_probs=36.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++...+..||.++.. +.+.|.||.+.+..
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~-~g~~G~~P~~yv~~   59 (60)
T 2x3w_D           15 QEQDELSFKAGDELTKLGEEDEQGWCRGRLD-SGQLGLYPANYVEA   59 (60)
T ss_dssp             SSSSBCCBCTTCEEEECSCCCSSSEEEEECS-SCCEEEEEGGGEEC
T ss_pred             cCCCcccCCCCCEEEEEEccCCCCceEEEeC-CCCEEEecHHHEEE
Confidence            3456788899999999987666689999854 68899999987764

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=93.77  E-value=0.057  Score=35.00  Aligned_cols=48  Identities=33%  Similarity=0.605  Sum_probs=37.6

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccc----eeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLS----TFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++... ..||.+...+    +.+.|.||.+.+..+..
T Consensus        31 ~~~~eLsf~~GDiI~V~~~~~-~gWw~G~~~~~~~~tg~~G~fPsnyV~~~~~   82 (83)
T 2ke9_A           31 HDPTALNVRAGDVITVLEQHP-DGRWKGHIHESQRGTDRIGYFPPGIVEVVSK   82 (83)
T ss_dssp             SCTTBCCBCTTCEEEESCSSC-SSCEEEEECCSSTTSCCCEEECGGGEESSCC
T ss_pred             CCCCcccccCCCEEEEEEecC-CCeEEEEECCCCCCCCCEEEechHHEEECCC
Confidence            345678889999999888765 4599999543    57899999998887653

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=93.67  E-value=0.051  Score=33.70  Aligned_cols=48  Identities=21%  Similarity=0.382  Sum_probs=40.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..|+.+.+++.. +..||.+++.++.+.|.||.+.+..+..
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~~~~~g~~G~~P~~yv~~~~~   62 (69)
T 1ruw_A           15 GSSSELPLKKGDIVFISRDE-PSGWSLAKLLDGSKEGWVPTAYMTPYKD   62 (69)
T ss_dssp             SCTTBCCBCTTCEEEEEEEC-TTSEEEEEETTSSCEEEEEGGGEEECCS
T ss_pred             CCCCcccCCCCCEEEEEEec-CCCeEEEEECCCCCEEEEehHHeEEcCC
Confidence            35567888999999998876 4679999998889999999999887654

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=93.66  E-value=0.059  Score=32.04  Aligned_cols=45  Identities=24%  Similarity=0.473  Sum_probs=36.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++......||.+++.++.+.|.||.+.+.
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~~~~g~~G~~P~~yv~   57 (58)
T 1zuu_A           13 KDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   57 (58)
T ss_dssp             CSTTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             cCCCcccCCCCCEEEEeEcCCCCCCEEEEECCCCCEEEEEHHHEE
Confidence            445678889999999998876567999998778899999988653

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.61  E-value=0.086  Score=33.88  Aligned_cols=48  Identities=17%  Similarity=0.369  Sum_probs=39.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++...+..||.+++..+.+.|.||.+.+....
T Consensus        29 ~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   76 (81)
T 1x6g_A           29 PKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERS   76 (81)
T ss_dssp             CCTTCCCBCTTCEEEEEECCCSSSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CCCCCCCCCCCCEEEEEeccCCCCeEEEEeCCCCCEEEEehHHEEEcc
Confidence            345668889999999999876668999997778899999999887644

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.49  E-value=0.035  Score=35.57  Aligned_cols=48  Identities=17%  Similarity=0.416  Sum_probs=40.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++.  +..||.+++.++.+.|.||...+..+...
T Consensus        29 ~~~~eLs~~~Gd~i~v~~~--~~gW~~g~~~~~g~~G~fP~~yv~~~~~~   76 (79)
T 1x6b_A           29 KQADEVTLQQADVVLVLQQ--EDGWLYGERLRDGETGWFPEDFARFISGP   76 (79)
T ss_dssp             CSSSBCCCCTTEEEEEEEE--ETTEEEEEETTTCCEEEECGGGCEEEESS
T ss_pred             CCcCCcCCCCCCEEEEEEe--CCCEEEEEECCCCCEEEEchHHEEECCCC
Confidence            3446788889999999888  78899999888899999999988876543

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=93.43  E-value=0.081  Score=30.93  Aligned_cols=42  Identities=31%  Similarity=0.567  Sum_probs=34.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIM  236 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  236 (251)
                      .....+.+..++.+.+++......||.+++  +.+.|.||.+.+
T Consensus        12 ~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~--~g~~G~~P~~yv   53 (54)
T 2a28_A           12 QGDDEISIDPGDIITVIRGDDGSGWTYGEC--DGLKGLFPTSYC   53 (54)
T ss_dssp             CSTTBCCBCTTCEEEEEECCCSSSEEEEEE--TTEEEEEEGGGB
T ss_pred             CCCCCccCCCCCEEEEEEecCCCCEEEEEE--CCeEEEeeHHHc
Confidence            345678889999999998876567999997  778899998765

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.34  E-value=0.061  Score=35.35  Aligned_cols=51  Identities=25%  Similarity=0.449  Sum_probs=41.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. +..||.+++.++.+.|.||.+.+..+.....
T Consensus        29 ~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~~~~g~~G~fP~~yv~~~~~~~~   79 (90)
T 2yup_A           29 DLEVELSFRKGEHICLIRKV-NENWYEGRITGTGRQGIFPASYVQVSREPRL   79 (90)
T ss_dssp             CSSSBCCCCTTCEEEESSCC-CSSEEEEECTTTCCEEEEEGGGEEEEECCCC
T ss_pred             CCcCcCCCCCCCEEEEEEEc-CCCeEEEEECCCCCEEEEehHHeEEcCCCcc
Confidence            34567888999999998864 4779999988889999999998887765433

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=93.16  E-value=0.073  Score=34.07  Aligned_cols=51  Identities=24%  Similarity=0.539  Sum_probs=39.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..|+.+.+++... ..||.+++.++.+.|.||.+.+..+...+.
T Consensus        17 ~~~~eLs~~~Gd~i~vl~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~~   67 (79)
T 3cqt_A           17 RTEDDLSFHKGEKFQILNSSE-GDWWEARSLTTGETGYIPSIYLAPVDRLDY   67 (79)
T ss_dssp             CSTTBCCBCTTCEEEEEECTT-SSEEEEEETTTCCEEEEEGGGEEEC-----
T ss_pred             CCcCcCCCCCCCEEEEEEecC-CCeEEEEECCCCCEEEeehHHeEECCcccc
Confidence            345678889999999988654 679999988889999999999888765544

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.00  E-value=0.12  Score=32.02  Aligned_cols=50  Identities=16%  Similarity=0.319  Sum_probs=40.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.....-||.+++. +.+.|.||.+.+..+...+
T Consensus        19 ~~~~eLs~~~Gd~i~vl~~~~~~gW~~~~~~-~g~~G~~P~~yv~~~~~~~   68 (70)
T 2ct4_A           19 SSEGTISMAEGEDLSLMEEDKGDGWTRVRRK-EGGEGYVPTSYLRVTSGPS   68 (70)
T ss_dssp             CSTTCCCBCTTCEEEEEECCSSSCEEEEECS-SSCEEEEEGGGEEECCCCS
T ss_pred             CCCCcCCCCCCCEEEEEeccCCCCeEEEEeC-CCCEEEEEhHHeEEcCCCC
Confidence            4456788899999999987765669999866 6789999999888776544

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=92.98  E-value=0.061  Score=33.12  Aligned_cols=47  Identities=21%  Similarity=0.533  Sum_probs=38.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++.. +..||.+++..+.+.|.||.+.++.+.
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~   64 (67)
T 2o9s_A           18 DTQVEMSFRKGERITLLRQV-DENWYEGRIPGTSRQGIFPITYVDVIK   64 (67)
T ss_dssp             SSTTBCCBCTTCEEEEEEEC-SSSEEEEECTTSSCEEEEEGGGEEEEE
T ss_pred             CCcCccCCCCCCEEEEEEec-CCCEEEEEECCCCCEEEEChHHeEECC
Confidence            34567888999999988864 467999998888899999999887654

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.86  E-value=0.11  Score=34.42  Aligned_cols=52  Identities=21%  Similarity=0.346  Sum_probs=41.7

Q ss_pred             ccCCcccccCCCeEEEecCC-CC--CCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD-PE--CHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. .+  ..||.+.+..+.+.|.||.+.+..+.....
T Consensus        28 ~~~~eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~~~~   82 (94)
T 2e5k_A           28 QNDDELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADECST   82 (94)
T ss_dssp             SSSSBCCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECCSCCC
T ss_pred             CCCCCcCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEcccCCC
Confidence            44567888999999999875 23  789999988889999999999887764443

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.84  E-value=0.056  Score=34.61  Aligned_cols=48  Identities=21%  Similarity=0.367  Sum_probs=39.0

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      ....+.+..++.+.+++.  +..||.+++.++.+.|.||.+.+..+...+
T Consensus        30 ~~~eLs~~~Gd~i~v~~~--~~~Ww~~~~~~~g~~G~~P~~yv~~~~~ps   77 (79)
T 2cud_A           30 DISPPIFRRGEKLRVISD--EGGWWKAISLSTGRESYIPGICVARVSGPS   77 (79)
T ss_dssp             TTSCCSSCTTCEEEEEEE--ETTEEEEEETTTCCEEEEEGGGEEEECCCS
T ss_pred             CCCcCCCCCCCEEEEEec--CCCeEEEEECCCCCEEEeeHHHeEEccCCC
Confidence            445688899999999983  567999998888899999999988765543

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=92.76  E-value=0.085  Score=32.86  Aligned_cols=46  Identities=24%  Similarity=0.407  Sum_probs=36.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++...+..||.+++. +.+.|.||.+.+...
T Consensus        23 ~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~-~g~~G~~P~~yv~~~   68 (71)
T 1csk_A           23 TAEQDLPFCKGDVLTIVAVTKDPNWYKAKNK-VGREGIIPANYVQKR   68 (71)
T ss_dssp             SSTTBCCBCTTCEEEEEEECSSTTEEEEECT-TSCEEEEETTSEEC-
T ss_pred             CCCCcCCCCCCCEEEEeECCCCCCCEEEEeC-CCCEEEEehHHeEEc
Confidence            3456788899999999985556789999954 788999999988764

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=92.75  E-value=0.076  Score=33.10  Aligned_cols=49  Identities=18%  Similarity=0.350  Sum_probs=38.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++... ..||.+.+.++.+.|.||.+.+..+...
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~-~gW~~g~~~~~g~~G~fP~~yv~~~~~~   66 (71)
T 2fpf_A           18 RHEDELELEVDDPLLVELQAE-DYWYEAYNMRTGARGVFPAYYAIEVTKE   66 (71)
T ss_dssp             SSTTBCCBCTTCEEEEEEECT-TSEEEEEETTTTEEEEEEGGGEEECC--
T ss_pred             cCCCcccCcCCcEEEEeEecC-CCEEEEEECCCCCEEEeehHHEEECCCC
Confidence            345678888999999886544 6799999888899999999998876543

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.73  E-value=0.13  Score=31.66  Aligned_cols=48  Identities=27%  Similarity=0.607  Sum_probs=38.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++. .+..||.++.  +.+.|.||.+.+..+...+
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~--~g~~G~~P~~yv~~~~~~s   66 (68)
T 1x2k_A           19 RTPDELYFEEGDIIYITDM-SDTNWWKGTS--KGRTGLIPSNYVAEQSGPS   66 (68)
T ss_dssp             CSTTBCCCCSSCEEEEEEC-SCSSEEEEES--SSCEEEEETTTEEECCCCC
T ss_pred             CCCCcccCCCCCEEEEEEc-CCCCEEEEEE--CCcEEEEehHHeEEcCCCC
Confidence            3456788889999999887 4577999986  6789999999988775443

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=92.73  E-value=0.12  Score=33.56  Aligned_cols=52  Identities=27%  Similarity=0.548  Sum_probs=41.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPD  245 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  245 (251)
                      .....+.+..++.+.+++... ..||.+...++.+.|.||.+.+..+......
T Consensus        18 ~~~~eLsf~~Gd~i~vl~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~~e   69 (84)
T 4ag1_C           18 TRWTDLSFHKGEKFQILEFGP-GDWWEARSLTTGETGYIPSNYVAPVDSIQGE   69 (84)
T ss_dssp             SBTTBCCBCTTCEEEEEECCS-SSEEEEEETTTCCEEEEEGGGEEETTTCC--
T ss_pred             CCCCcccccCCCEEEEEEecC-CCeEEEEECCCCCEEEEehHHeEECCCcccc
Confidence            445678889999999888764 5699999878889999999998887665543

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.71  E-value=0.14  Score=32.40  Aligned_cols=47  Identities=21%  Similarity=0.340  Sum_probs=38.8

Q ss_pred             CCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      ...+.+..++.+.+++...+..||.+..  ..+.|.||.+.+..+....
T Consensus        28 ~~eLsf~~Gd~i~v~~~~~~~gWw~g~~--~g~~G~~P~~yv~~~~~~~   74 (76)
T 2csi_A           28 EAELTFCTGDIITVFGEIDEDGFYYGEL--NGQKGLVPSNFLEEVSGPS   74 (76)
T ss_dssp             TTSCCCCTTCEEEEESSCCSSSEEEEEE--TTEEEEEEGGGCCBCCCCC
T ss_pred             CCcccCCCCCEEEEeEecCCCCeEEEEE--CCcEEEEehHHEEECCCCC
Confidence            5678889999999999876667999985  5789999999998876543

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.70  E-value=0.2  Score=31.25  Aligned_cols=49  Identities=20%  Similarity=0.494  Sum_probs=39.1

Q ss_pred             ccCCcccccCCCeEEEecCC--CCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD--PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++..  .+..||.++  .+.+.|.||.+.+..+....
T Consensus        20 ~~~~eLsf~~Gd~i~v~~~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~~~~   70 (73)
T 2dl7_A           20 QTDDELSFPEGAIIRILNKENQDDDGFWEGE--FNGRIGVFPSVLVEELSSGP   70 (73)
T ss_dssp             SSTTBCCBCTTCEEEEEECCCSSSSSCEEEE--ETTEEEEECSSSEEECCSSC
T ss_pred             CCCCcCCCCCCCEEEEEECCCCCCCCcEEEE--ECCCEEEEChHHEEECCCCC
Confidence            34556888999999999875  467899998  57788999999998876543

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=92.59  E-value=0.082  Score=32.03  Aligned_cols=46  Identities=26%  Similarity=0.391  Sum_probs=37.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++... ..||.+++.++.+.|.||.+.+..+
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~~~~g~~G~~P~~yv~~~   63 (64)
T 4f14_A           18 QDEDEVSFRDGDYIVNVQPID-DGWMYGTVQRTGRTGMLPANYIEFV   63 (64)
T ss_dssp             CSTTBCCBCTTCEEEEEEECS-SSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             cCCCcCCCCCCCEEEEEEeCC-CCeEEEEECCCCCEEEEeHHHeEEC
Confidence            345568889999998887764 6799999888899999999887653

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=92.58  E-value=0.14  Score=32.75  Aligned_cols=49  Identities=29%  Similarity=0.609  Sum_probs=39.8

Q ss_pred             ccCCcccccCCCeEEEecCCC-CCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++... +..||.++.  ..+.|.||...++.+....
T Consensus        29 ~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~~~~   78 (80)
T 2d8h_A           29 QQPGDLNFQAGDRITVISKTDSHFDWWEGKL--RGQTGIFPANYVTMNSGPS   78 (80)
T ss_dssp             SSTTBCEECTTCEEEEEECCSCSSSEEEEEE--TTEEEEEEGGGCCBCCCCS
T ss_pred             CCCCeeeEcCCCEEEEeECcCCCCCeEEEEE--CCEEEEEchhHeEEcCCCC
Confidence            345678889999999998875 578999997  5789999999998776543

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=92.56  E-value=0.078  Score=32.40  Aligned_cols=46  Identities=15%  Similarity=0.273  Sum_probs=37.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++... ..||.+.+..+.+.|.||.+.+..+
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~-~gW~~g~~~~~g~~G~~P~~yv~~~   63 (65)
T 2j05_A           18 PDTDEISFLKGDMFIVHNELE-DGWMWVTNLRTDEQGLIVEDLVEEV   63 (65)
T ss_dssp             TTSSBCCBCTTCEEEEEEECT-TSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCCCcCcCCCCCEEEEeEecC-CCEEEEEECCCCCEEEEEhHHeEEC
Confidence            345578888999999887654 5799999888899999999988765

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=92.54  E-value=0.099  Score=32.70  Aligned_cols=46  Identities=26%  Similarity=0.611  Sum_probs=37.6

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++... ..||.+.+.++.+.|.||...+..+
T Consensus        27 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~   72 (73)
T 3h0h_A           27 ITEDDLSFHKGEKFQILNSSE-GDWWEARSLTTGETGYIPSNYVAPV   72 (73)
T ss_dssp             SSTTBCCBCTTCEEEEEECSS-SSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCCCcceEeCCCEEEEEEecC-CCeEEEEECCCCCEEEEEHHHeEEC
Confidence            345678889999999888764 6799999888889999999887654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=92.51  E-value=0.042  Score=44.89  Aligned_cols=30  Identities=13%  Similarity=0.220  Sum_probs=25.3

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++||+|+.+.|  |+++.+..+.|+||+.+.
T Consensus       187 ~~liHgDl~~~N--il~~~~~~~~lIDf~~a~  216 (322)
T 2ppq_A          187 AGVIHADLFQDN--VFFLGDELSGLIDFYFAC  216 (322)
T ss_dssp             EEEECSCCCGGG--EEEETTEEEEECCCTTCE
T ss_pred             cccCCCCCCccC--EEEeCCceEEEecchhcc
Confidence            368999999999  888877666899998765

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=92.46  E-value=0.16  Score=31.34  Aligned_cols=48  Identities=21%  Similarity=0.549  Sum_probs=39.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++..  ..||.+++ .+.+.|.||.+.+..+....
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~--~~Ww~~~~-~~g~~G~~P~~yv~~~~~~~   66 (68)
T 1wxt_A           19 RNPRELTVVQGEKLEVLDHS--KRWWLVKN-EAGRSGYIPSNILEPLSGPS   66 (68)
T ss_dssp             CSSSBCCBCTTCEEEEEECS--SSEEEEEC-TTSCEEEEEGGGEECCCCSC
T ss_pred             CCcCcCCCCCCCEEEEEEcC--CCEEEEEE-CCCCEEEEEhHHcEECCCCC
Confidence            44567888999999999884  67999997 67889999999988876543

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=92.45  E-value=0.16  Score=32.36  Aligned_cols=51  Identities=20%  Similarity=0.470  Sum_probs=40.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCccccccccee---eeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTF---NIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++... ..||.++..++.   +.|.||.+.+..+.....
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~-~gWw~g~~~~~g~~~~~G~fP~~yv~~~~~~~~   72 (80)
T 1ue9_A           19 SGSEQLSLAPGQLILILKKNT-SGWWQGELQARGKKRQKGWFPASHVKLLGPSSE   72 (80)
T ss_dssp             CSTTBCCCCTTCEEEEEEECS-SSEEEEEECSCCSSCCEEEEETTSEEECCSCCS
T ss_pred             CCCCCCCCCCCCEEEEEEecC-CCcEEEEECCCCCCCcEEEEchHHeEECCCCCC
Confidence            345678889999999988755 679999987664   899999999988765544

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=92.43  E-value=0.066  Score=42.46  Aligned_cols=29  Identities=17%  Similarity=0.218  Sum_probs=25.0

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++|+|+.+.|  |+++..+.+-|+||+.+.
T Consensus       194 ~l~HGDl~~~N--il~~~~~~~~viDwe~a~  222 (272)
T 4gkh_A          194 VVTHGDFSLDN--LIFDEGKLIGCIDVGRVG  222 (272)
T ss_dssp             EEECSCCCTTS--EEEETTEEEEECCCTTCE
T ss_pred             EEEcCCCCCCe--EEEECCeEEEEEECcccc
Confidence            37999999999  888877777799999775

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=92.42  E-value=0.081  Score=34.34  Aligned_cols=47  Identities=30%  Similarity=0.598  Sum_probs=39.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++..  ..||.+++.++.+.|.||.+.+..+..
T Consensus        37 ~~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~~~   83 (86)
T 2oi3_A           37 IHHEDLSFQKGDQMVVLEES--GEWWKARSLATRKEGYIPSNYVARVDS   83 (86)
T ss_dssp             SSSSCCCCCTTCEEEEEEES--SSEEEEEETTTCCEEEEEGGGEEEGGG
T ss_pred             CCCCcCcCCCCCEEEEEEcC--CCeEEEEECCCCCEEEEehHHcEEccc
Confidence            34556888999999998887  489999988889999999998887643

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=92.41  E-value=0.11  Score=30.76  Aligned_cols=45  Identities=29%  Similarity=0.640  Sum_probs=36.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++... ..||.++.  +.+.|.||.+.+..+.
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   57 (58)
T 2bz8_A           13 QHDDELTISVGEIITNIRKED-GGWWEGQI--NGRRGLFPDNFVREIK   57 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEECCT-TTEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             CCcCEeeECCCCEEEEEEeCC-CCEEEEEE--CCeEEEEehHHeEEcC
Confidence            345678889999999988764 67999986  6788999999887664

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.39  E-value=0.18  Score=31.99  Aligned_cols=51  Identities=20%  Similarity=0.345  Sum_probs=40.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++......||.+++.. .+.|.||.+.+..+....+
T Consensus        25 ~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~-g~~G~~P~~yv~~~~~~~~   75 (78)
T 2dl5_A           25 SQPDELTIEEHEVLEVIEDGDMEDWVKARNKV-GQVGYVPEKYLQFPTSSGP   75 (78)
T ss_dssp             CSTTBCCBCSSEEEEEEECCSSSSEEEEECTT-CCEEEEETTTSCCSCCCCS
T ss_pred             CCCCCCCCCCCCEEEEEeccCCCCcEEEEeCC-CCEEEEEhHHEEECCCCCC
Confidence            34567888999999999987557899998653 7889999999888765443

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=92.37  E-value=0.12  Score=30.65  Aligned_cols=45  Identities=29%  Similarity=0.698  Sum_probs=36.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++.. +..||.+++  +.+.|.||.+.+..+.
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~   57 (58)
T 1uti_A           13 LEEDELGFRSGEVVEVLDSS-NPSWWTGRL--HNKLGLFPANYVAPMM   57 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEECC-SSSEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             CCcCCCCCCCCCEEEEEEEC-CCCEEEEEE--CCeEEEeeHHHeEEcc
Confidence            34567888999999998874 467999996  5789999999887653

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=92.30  E-value=0.07  Score=31.79  Aligned_cols=46  Identities=20%  Similarity=0.391  Sum_probs=37.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.. +..||.+.+.++.+.|.||.+.+..+
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~-~~gW~~g~~~~~g~~G~~P~~yv~~~   58 (59)
T 1yn8_A           13 ENDNELRLAEGDIVFISYKH-GQGWLVAENESGSKTGLVPEEFVSYI   58 (59)
T ss_dssp             CSTTBCCBCTTCEEEEEEEE-ETTEEEEECTTSSCEEEEEGGGEEEC
T ss_pred             CCCCCcCCCCCCEEEEEEcC-CCCeEEEEECCCCCEEEEehHHeEEC
Confidence            34557888899999888764 46799999888889999999887654

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=92.25  E-value=0.14  Score=31.02  Aligned_cols=46  Identities=17%  Similarity=0.436  Sum_probs=36.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccce------eeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLST------FNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.. +..||.+...++      .+.|.||.+.+..+
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l   64 (65)
T 2oaw_A           13 KSPREVTMKKGDILTLLNST-NKDWWKVEVKITVNGKTYERQGFVPAAYVKKL   64 (65)
T ss_dssp             SSTTBCCBCTTCEEEEEECC-SSSEEEEEEEEEETTEEEEEEEEEEGGGEEEC
T ss_pred             cCCCCCCCCCCCEEEEEEcC-CCCEEEEEEccccCCCcCCcEEEEchHHeEEc
Confidence            34567888999999999876 467999997755      88999999887654

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=92.21  E-value=0.13  Score=30.76  Aligned_cols=44  Identities=32%  Similarity=0.690  Sum_probs=35.4

Q ss_pred             ccCCcccccCCCeEEEecCCC-CCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++... ...||.+++  ..+.|.||.+.++.
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~   59 (60)
T 1oot_A           15 EESGDLPFRKGDVITILKKSDSQNDWWTGRV--NGREGIFPANYVEL   59 (60)
T ss_dssp             CSTTBCCBCTTCEEEEEECCSCTTSEEEEEE--TTEEEEEEGGGEEE
T ss_pred             CCcCEeeEcCCCEEEEEEeCCCCCCeEEEEE--CCEEEEEeHHHEEE
Confidence            345678889999999998863 678999997  67889999987754

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=92.07  E-value=0.27  Score=30.65  Aligned_cols=49  Identities=18%  Similarity=0.490  Sum_probs=38.6

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.  +..||.+++. ..+.|.||.+.+..+....+
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~-~g~~G~~P~~yv~~~~~~~~   67 (72)
T 2jw4_A           19 QQEQELDIKKNERLWLLDD--SKSWWRVRNS-MNKTGFVPSNYVERKNSARA   67 (72)
T ss_dssp             SSTTSCCCCTTCEEEEEEC--SSSSEEEECT-TSCEEEECTTSCEECCCCCS
T ss_pred             CCCCcccCCCCCEEEEEEC--CCCEEEEEEC-CCCEEEEEhhHEEEcCCCcc
Confidence            3456788899999999986  3579999865 67889999998887665444

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=92.01  E-value=0.22  Score=30.67  Aligned_cols=48  Identities=21%  Similarity=0.424  Sum_probs=38.6

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. +..||.+++.  .+.|.||.+.++.+...+
T Consensus        20 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~--g~~G~~P~~yv~~~~~~~   67 (69)
T 2dil_A           20 QNPDELDLSAGDILEVILEG-EDGWWTVERN--GQRGFVPGSYLEKLSGPS   67 (69)
T ss_dssp             SSSSSCCBCTTCEEEEEECC-SSSEEEEEET--TEEEEEEGGGCCBCCCSS
T ss_pred             cCcCccCCCCCCEEEEEECC-CCCEEEEEEC--CCEEEEehHHeEEcCCCC
Confidence            34567888999999999884 4679999863  788999999998876654

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=91.88  E-value=0.2  Score=31.03  Aligned_cols=51  Identities=24%  Similarity=0.511  Sum_probs=40.0

Q ss_pred             ccCCcccccCCCeEEEecCC-CCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. .+..||.+.+. ..+.|.||.+.+..+....+
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~-~g~~G~~P~~yv~~~~~~~~   69 (71)
T 1u5s_A           18 VTEEELNFEKGETMEVIEKPENDPEWWKCKNA-RGQVGLVPKNYVVVLSDGPA   69 (71)
T ss_dssp             CSSSBCCCCSSCCEEEEECCCTTTCEEEEEET-TTEEEEEETTSEEECCCSCC
T ss_pred             CCCCcccCCCCCEEEEEECCCCCCCCEEEEeC-CCCEEEEeHHHEEECCCCCC
Confidence            34567888999999999874 46779999853 47889999999988876554

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=91.80  E-value=0.087  Score=32.67  Aligned_cols=50  Identities=20%  Similarity=0.472  Sum_probs=39.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. +..||.+++..+.+.|.||.+.+..+....
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   68 (70)
T 2ecz_A           19 DTQVEMSFRKGERITLLRQV-DENWYEGRIPGTSRQGIFPITYVDVISGPS   68 (70)
T ss_dssp             CSTTBCCCCTTCBCEEEEEE-ETTEEEEEETTTTEEEEECTTTEEESSSCC
T ss_pred             CCcCCcCCCCCCEEEEEEec-CCCeEEEEECCCCCEEEEchHHEEECCCCC
Confidence            34557888899999888764 357999998888899999999998876543

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=91.78  E-value=0.29  Score=29.91  Aligned_cols=46  Identities=24%  Similarity=0.606  Sum_probs=37.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++.. +..||.+++. ..+.|.||.+.+..++
T Consensus        14 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~-~g~~G~~P~~yv~~~~   59 (67)
T 1gl5_A           14 TEAHDLRLERGQEYIILEKN-DLHWWRARDK-YGSEGYIPSNYVTGKK   59 (67)
T ss_dssp             SSSSBCCBCTTCEEEEEECS-SSSEEEEECS-SSCEEEEETTSEESST
T ss_pred             CCCCeecCCcCCEEEEEEcc-CCCcEEEEEC-CCCEEEEEhHhEEEcC
Confidence            34567888999999999884 4679999865 5788999999998873

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.76  E-value=0.077  Score=33.09  Aligned_cols=48  Identities=17%  Similarity=0.282  Sum_probs=38.2

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      ....+.+..++.+.+++.. +..||.+.+.++.+.|.||.+.+..+...
T Consensus        21 ~~~eLsf~~Gd~i~v~~~~-~~~W~~g~~~~~g~~G~~P~~yv~~~~~~   68 (71)
T 2gqi_A           21 DTDEISFLKGDMFIVHNEL-EDGWMWVTNLRTDEQGLIVEDLVEEVSGP   68 (71)
T ss_dssp             TSSCCCCCTTCBCCCCEEC-SSSCEEEECTTTCCEEEECTTSEEECCCS
T ss_pred             CCCCCCCCCCCEEEEEEec-CCCEEEEEECCCCCEEEeeHHHEEECCCC
Confidence            3456778888888877664 35799999888899999999998877543

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=91.74  E-value=0.17  Score=29.79  Aligned_cols=44  Identities=23%  Similarity=0.494  Sum_probs=34.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++... ..||.+++.. .+.|.||.+.+..
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~~-g~~G~~P~~yv~~   56 (57)
T 1cka_A           13 NDEEDLPFKKGDILRIRDKPE-EQWWNAEDSE-GKRGMIPVPYVEK   56 (57)
T ss_dssp             SSTTBCCBCTTCEEEEEECSS-SSEEEEECTT-SCEEEEEGGGEEC
T ss_pred             CCCCCCCCCCCCEEEEEEecC-CCcEEEEeCC-CCEEEEeHHHEEE
Confidence            345568888999999988754 6799998654 7889999987764

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=91.74  E-value=0.2  Score=31.01  Aligned_cols=49  Identities=27%  Similarity=0.618  Sum_probs=39.0

Q ss_pred             ccCCcccccCCCeEEEecCC-CCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. .+..||.+..  +.+.|.||.+.+..+....
T Consensus        14 ~~~~eLs~~~Gd~i~vl~~~~~~~gWw~g~~--~g~~G~~P~~yV~~~~~~~   63 (69)
T 2ydl_A           14 QNDDELTIKEGDIVTLINKDCIDVGWWEGEL--NGRRGVFPDNFVKLLPPLE   63 (69)
T ss_dssp             CSTTBCCBCTTCEEEEEESCCSSTTEEEEEE--TTEEEEEEGGGEEECCSCC
T ss_pred             CCCCccccCCCCEEEEEEcCCCCCCEEEEEE--CCcEEEecHHHEEECCCCc
Confidence            34567888999999999886 4677999984  6788999999888765443

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.65  E-value=0.25  Score=30.38  Aligned_cols=46  Identities=20%  Similarity=0.434  Sum_probs=37.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++..  ..||.+.+ ...+.|.||.+.+..+..
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~--~~Ww~~~~-~~g~~G~~P~~yv~~~~~   64 (68)
T 1wxb_A           19 RNANELSVLKDEVLEVLEDG--RQWWKLRS-RSGQAGYVPCNILGEASG   64 (68)
T ss_dssp             SSSSBCCBCTTCEEEEEECS--SSEEEEEC-TTSCEEEEETTTCCBCCC
T ss_pred             CCCCccCCCCCCEEEEEEcC--CCEEEEEE-CCCCEEEEEHHHeEECCC
Confidence            34567888999999999874  77999986 457889999999887754

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=91.65  E-value=0.23  Score=30.60  Aligned_cols=44  Identities=18%  Similarity=0.527  Sum_probs=35.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..|+.+.+++.+  ..||.+.+. ..+.|.||.+.+..+
T Consensus        16 ~~~~ELsf~~Gd~i~vl~~~--~~Ww~~~~~-~g~~G~~Psnyv~~~   59 (67)
T 2b86_A           16 QQDQELDIKKNERLWLLDDS--KTWWRVRNA-ANRTGYVPSNYVERK   59 (67)
T ss_dssp             SSTTSCCBCTTCEEEEEECS--SSSCEEECT-TSCEEECCCCSEEEC
T ss_pred             CCCCccccCCCCEEEEEecC--CCeEEEEeC-CCCEEEeChHHEeEc
Confidence            34567888999999999884  579999865 578899999977654

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=91.64  E-value=0.3  Score=32.39  Aligned_cols=49  Identities=20%  Similarity=0.346  Sum_probs=38.8

Q ss_pred             CCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      ...+.+..++.+.++....+..||.+.. ...+.|.||.+.+..+.....
T Consensus        37 ~~eLsf~~Gd~i~v~~~~~~~gWw~g~~-~~g~~G~~Psnyv~~~~~~~~   85 (96)
T 1wie_A           37 EAELPLTAGKYLYVYGDMDEDGFYEGEL-LDGQRGLVPSNFVDFVQDNES   85 (96)
T ss_dssp             TTBCCCCTTCEEEEESSCCSSSCCEEEE-TTCCBCBCCTTSEECCCSCCC
T ss_pred             CCeeeECCCCEEEEeEecCCCCEEEEEE-CCCCEEEEchHHEEEcCCCCc
Confidence            6678889999999995455678999983 457889999999888765443

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=91.61  E-value=0.13  Score=30.94  Aligned_cols=46  Identities=26%  Similarity=0.452  Sum_probs=37.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++...+..||.++.  +.+.|.||.+.+..+.
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~   58 (62)
T 2j6f_A           13 VHDDELTIRVGEIIRNVKKLQEEGWLEGEL--NGRRGMFPDNFVKEIK   58 (62)
T ss_dssp             SSTTBCCBCTTCEEEEEEECSSTTEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             CCcCCcCCcCCCEEEEEEecCCCCEEEEEE--CCcEEEechHHEEECC
Confidence            345678889999999988755678999984  6788999999888764

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=91.59  E-value=0.18  Score=31.06  Aligned_cols=46  Identities=22%  Similarity=0.531  Sum_probs=37.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++..  ..||.+++ ...+.|.||.+.+..+..
T Consensus        20 ~~~~eLs~~~Gd~i~v~~~~--~~Ww~~~~-~~g~~G~~P~~yv~~~~~   65 (68)
T 2k2m_A           20 RNSSELSVKQRDVLEVLDDS--RKWWKVRD-PAGQEGYVPYNILTPYPA   65 (68)
T ss_dssp             CSSSBCCBCTTCEEEEEECS--SSEEEEEC-TTSCCEEEEGGGEEECCS
T ss_pred             CCCCcccCCCCCEEEEEEcC--CCeEEEEe-CCCCEEEEEhhhEEEcCC
Confidence            44567888999999999985  67999986 457889999998887654

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=91.56  E-value=0.12  Score=30.90  Aligned_cols=43  Identities=33%  Similarity=0.648  Sum_probs=34.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++.. +..||.+++  +.+.|.||.+.++.
T Consensus        17 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~   59 (60)
T 2xmf_A           17 QDTDELSFNANDIIDIIKED-PSGWWTGRL--RGKQGLFPNNYVTK   59 (60)
T ss_dssp             SSTTBCCBCTTCEEEEEEEC-TTSEEEEEE--TTEEEEEEGGGEEE
T ss_pred             CCcCCcCCCCCCEEEEEEec-CCCEEEEEE--CCEEEEEcHHHEEE
Confidence            34467888899999988876 467999997  67889999987764

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=91.52  E-value=0.19  Score=31.74  Aligned_cols=49  Identities=20%  Similarity=0.417  Sum_probs=39.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccce-eee------ecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLST-FNI------GMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++.. +..||.+++.++ .+.      |.||.+.+..+...
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~~~   74 (77)
T 2d8j_A           19 RTAEDLSFRAGDKLQVLDTS-HEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDSGP   74 (77)
T ss_dssp             SSSSBCCBCTTCCEEEEECC-SSSEEEEEECSSCCSSCCCCSEEEEETTTEEECCCC
T ss_pred             CCCCccCCCCCCEEEEEECC-CCCeEEEEECCCCCcCcccCCceEECHHHeeEcCCc
Confidence            34456888999999999886 467999998877 777      99999988876543

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.50  E-value=0.23  Score=31.21  Aligned_cols=44  Identities=23%  Similarity=0.465  Sum_probs=36.8

Q ss_pred             CCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      ...+.+..++.+.+++...+..||.++.  ..+.|.||.+.+..+.
T Consensus        28 ~~eLsf~~Gd~i~v~~~~~~~gWw~g~~--~g~~G~fP~~yv~~~~   71 (75)
T 2ege_A           28 KGRLALRAGDVVMVYGPMDDQGFYYGEL--GGHRGLVPAHLLDHMS   71 (75)
T ss_dssp             CCBCCBCTTCEEEEESCCCTTCEEEEES--SSCEEEEETTTEEECC
T ss_pred             CCcceECCCCEEEEeEccCCCCEEEEEE--CCcEEEEChHHeEEcc
Confidence            5678889999999998656788999996  6788999999888764

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=91.50  E-value=0.08  Score=43.53  Aligned_cols=32  Identities=13%  Similarity=0.197  Sum_probs=26.9

Q ss_pred             hCCcccCCCCCCCceEEEccC----CceEEccCCCCcc
Q psy2787          35 VNNICSCQFSSSSLLILFFSS----SSSSSGDFGMMRY   68 (251)
Q Consensus        35 ~~~iiHrdlkp~ni~il~~~~----~~~kl~DFGla~~   68 (251)
                      ...++|+|+.+.|  |+++.+    +.+.|.||+.+..
T Consensus       182 ~~~lvHgD~~~~N--il~~~~~~~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          182 DMVFVHRDFHAQN--LLWLPEREGLARVGVIDFQDAKL  217 (333)
T ss_dssp             CCEEECSCCSGGG--EEECTTSCGGGGEEECCCTTCEE
T ss_pred             CCeeEeCCcCccc--EEeccCcCCCCCeEEEeCCCcCc
Confidence            3469999999999  888764    6789999998875

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=91.44  E-value=0.24  Score=30.88  Aligned_cols=50  Identities=24%  Similarity=0.452  Sum_probs=39.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPD  245 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  245 (251)
                      .....+.+..++.+.+++.. +..||.++.  +.+.|.||.+.+..+......
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~~~~~   68 (73)
T 2dbm_A           19 ENEGELGFKEGDIITLTNQI-DENWYEGML--HGHSGFFPINYVEILVALPHS   68 (73)
T ss_dssp             CSTTCCCBCTTCEEECCBCS-SSSEEEEEE--TTEEEEEESSSEEESSCCSCC
T ss_pred             CCCCCccCCCCCEEEEEEec-CCCEEEEEE--CCCEEEechHHEEEccCCCCC
Confidence            34567888999999988876 467999985  678999999998887655443

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=91.41  E-value=0.096  Score=42.68  Aligned_cols=31  Identities=16%  Similarity=0.145  Sum_probs=25.1

Q ss_pred             CCcccCCCCCCCceEEEcc---CCc-eEEccCCCCcc
Q psy2787          36 NNICSCQFSSSSLLILFFS---SSS-SSSGDFGMMRY   68 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~---~~~-~kl~DFGla~~   68 (251)
                      ..++|+|+.+.|  |+++.   ++. +.|+||+.+..
T Consensus       190 ~~~~HgD~~~~N--~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          190 PRLIHGDLSPDH--FLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             CEEECSCCSGGG--EEECTTCSSCCEEEECCCTTCEE
T ss_pred             CeeEeCCCCccc--EEEecCCCCCceEEEEehhhcCC
Confidence            368999999999  98887   344 58999998764

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=91.23  E-value=0.13  Score=31.63  Aligned_cols=45  Identities=20%  Similarity=0.513  Sum_probs=35.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCccccccccee---eeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTF---NIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++.. +..||.+....+.   +.|.||.+.+..
T Consensus        19 ~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~~~~g~~~~~G~fP~~yv~~   66 (68)
T 1tg0_A           19 DYEDDLNFEKDQEIIVTSVE-DAEWYFGEYQDSNGDVIEGIFPKSFVAV   66 (68)
T ss_dssp             SCTTBCCBCTTCEEEEEEEC-SSSEEEEEEECTTSCEEEEEEEGGGEEE
T ss_pred             CCcCCCCCCCCCEEEEEEec-CCCeEEEEECCCCCCCEEEEEchHHEEE
Confidence            34567888999999988764 4679999987766   899999987764

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.16  E-value=0.26  Score=30.30  Aligned_cols=49  Identities=31%  Similarity=0.669  Sum_probs=38.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. +..||.+.  ...+.|.||.+.+..+...++
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~--~~g~~G~~P~~yv~~~~~~~~   67 (68)
T 2dl4_A           19 QENEDLEMRPGDIITLLEDS-NEDWWKGK--IQDRIGFFPANFVQRLSGPSS   67 (68)
T ss_dssp             SSTTBCCCCTTCEEEEEECC-CSSEEEEE--CSSCEEEEETTTEEECCCCCC
T ss_pred             CCcCCcCCCCCCEEEEEEeC-CCCEEEEE--ECCcEEEEehHHeEECCCCCC
Confidence            34567888999999999864 46799998  467899999999988765543

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=91.16  E-value=0.13  Score=30.73  Aligned_cols=45  Identities=33%  Similarity=0.631  Sum_probs=36.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++.  +..||.+.+.. .+.|.||.+.+..+.
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~--~~~Ww~~~~~~-g~~G~~P~~yv~~~~   57 (60)
T 1i07_A           13 RNSSELSVMKDDVLEILDD--RRQWWKVRNAS-GDSGFVPNNILDIMR   57 (60)
T ss_dssp             SSTTBCCBCTTCEEEECGG--GCCEEEEECTT-SCEEEEEGGGEEEEC
T ss_pred             CCCCcccCCCCCEEEEEEc--CCCeEEEEECC-CCEEEEEHHHeEEcc
Confidence            3455788899999999988  67899998653 788999999887664

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=91.16  E-value=0.19  Score=29.75  Aligned_cols=44  Identities=36%  Similarity=0.783  Sum_probs=35.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.. +..||.+++  +.+.|.||.+.+..+
T Consensus        14 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~   57 (58)
T 2vwf_A           14 QEDGELGFRRGDFIHVMDNS-DPNWWKGAC--HGQTGMFPRNYVTAV   57 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEECC-SSSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CCcCCcCCCCCCEEEEEEcC-CCCEEEEEE--CCcEEEEchHHeEEC
Confidence            34557888899999998875 467999997  778999999887654

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=91.15  E-value=0.24  Score=31.68  Aligned_cols=48  Identities=15%  Similarity=0.273  Sum_probs=39.0

Q ss_pred             ccCCcccccCCCeEEEecCCC-CCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++... +..||.++  .+.+.|.||.+.++.+...
T Consensus        29 ~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~~~   77 (81)
T 1x43_A           29 ANSTELSLLADEVITVFSVVGMDSDWLMGE--RGNQKGKVPITYLELLNSG   77 (81)
T ss_dssp             SSTTBCCCCTTCEEEEECCTTCCTTEEEEE--ETTEEEEEEGGGEEECCCC
T ss_pred             CCCCcCCCCCCCEEEEEEcCCCCCCcEEEE--ECCCEEEEehHHEEECCCC
Confidence            345678889999999999864 67899997  5788999999998877644

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=91.05  E-value=0.2  Score=31.64  Aligned_cols=51  Identities=22%  Similarity=0.519  Sum_probs=39.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccc-eeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLS-TFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++. .+..||.+.... +.+.|.||.+.+..+....+
T Consensus        22 ~~~~eLsf~~Gd~i~v~~~-~~~~Ww~g~~~~~~g~~G~~P~~yv~~~~~~~p   73 (76)
T 2ed1_A           22 DNDDELTFIEGEVIIVTGE-EDQEWWIGHIEGQPERKGVFPVSFVHILSDSGP   73 (76)
T ss_dssp             SSSSBCCCCSSCEEEESSC-CSSSEEEEEETTCTTCEEEEEGGGEEECCCCCC
T ss_pred             CCcCCcCcCCCCEEEEEEe-cCCCEEEEEECCCCCCEEEEehHHeEECCCCCC
Confidence            3455788889999999875 446799999643 56889999999988765543

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=91.04  E-value=0.2  Score=32.86  Aligned_cols=44  Identities=27%  Similarity=0.653  Sum_probs=35.9

Q ss_pred             ccCCcccccCCCeEEEecCC----CCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD----PECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++..    .+..||.+++. ..+.|.||.+.+.
T Consensus        41 ~~~~ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~-~g~~G~fP~nyV~   88 (89)
T 2rf0_A           41 AGDEELTLRRGDRVQVLSQDCAVSGDEGWWTGQLP-SGRVGVFPSNYVA   88 (89)
T ss_dssp             SSTTBCCBCTTCEEEEEECCHHHHSSTTEEEEECT-TCCEEEEEGGGEE
T ss_pred             CCCCccccCCCCEEEEEeccCCcccCCCEEEEEEC-CCCEEEEcHHHCc
Confidence            44567888999999999986    47889999974 4788999998765

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=91.03  E-value=0.43  Score=30.98  Aligned_cols=53  Identities=26%  Similarity=0.676  Sum_probs=40.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCCCCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDIS  248 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  248 (251)
                      .....+.+..++.+.+++.. +..||.+++.  ...|.||.+.+..+.......+.
T Consensus        29 ~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~~--g~~G~~P~~yv~~~~~~~~~~~~   81 (88)
T 1x2q_A           29 VEDNELTFKHGEIIIVLDDS-DANWWKGENH--RGIGLFPSNFVTTNLNIETEAAA   81 (88)
T ss_dssp             CSSSCCCCCSSCEEEEEECS-CSSSEEEEET--TEEEEECGGGEESCSSCCSCCCS
T ss_pred             CCcCccCCCCCCEEEEEEeC-CCCEEEEEEC--CcEEEEehHHEEEcCCcCccccc
Confidence            34567888999999999864 4679999965  55899999999887776655443

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.89  E-value=0.28  Score=30.09  Aligned_cols=48  Identities=23%  Similarity=0.480  Sum_probs=38.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. +..||.++.  ..+.|.||.+.+..+...+
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~~~   66 (68)
T 1x2p_A           19 TDETQLSFLRGEKILILRQT-TADWWWGER--AGCCGYIPANHVGKHSGPS   66 (68)
T ss_dssp             SSTTBCCCCTTCEEEEEECC-SSSEEEEEC--TTCCEEEESSSEECCCCSC
T ss_pred             CCcCCcCCCCCCEEEEEEcC-CCCEEEEEE--CCeEEEEehHHeEECCCCC
Confidence            34567888999999998876 477999984  4788999999998876554

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=90.88  E-value=0.22  Score=30.81  Aligned_cols=49  Identities=27%  Similarity=0.622  Sum_probs=39.1

Q ss_pred             ccCCcccccCCCeEEEecCC-CCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. .+..||.++.  +.+.|.||.+.+..+....
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~--~g~~G~~P~~yv~~~~~~~   68 (70)
T 2da9_A           19 QNDDELTIKEGDIVTLINKDCIDVGWWEGEL--NGRRGVFPDNFVKLLSGPS   68 (70)
T ss_dssp             SSTTBCCCCTTEEEEEEECCCSSTTEEEEEC--SSCEEEEEGGGEEECCCCC
T ss_pred             CCcCEeeEcCCCEEEEEECCCCCCCeEEEEE--CCcEEEechHHeEECCCCC
Confidence            34567888999999999876 4678999984  6788999999998776543

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=90.85  E-value=0.15  Score=31.79  Aligned_cols=49  Identities=18%  Similarity=0.358  Sum_probs=38.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++...+..||.+.  ...+.|.||.+.++.+....
T Consensus        22 ~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~~~~   70 (72)
T 1ugv_A           22 EHDSELSFTAGTVFDNVHPSQEPGWLEGT--LNGKTGLIPENYVEFLSGPS   70 (72)
T ss_dssp             CSSSBCCBCTTCEEBSCCBCSSTTEEEEE--SSSCEEEEEGGGEEECCSSC
T ss_pred             cCCCEeCCcCCCEEEEEEecCCCCeEEEE--ECCcEEEecHHHEEECCCCC
Confidence            34567888899999888765667899998  46788999999988776543

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=90.74  E-value=0.21  Score=29.49  Aligned_cols=43  Identities=26%  Similarity=0.577  Sum_probs=34.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++.. +..||.+++  +.+.|.||.+.++.
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~~--~g~~G~~P~~yv~~   57 (58)
T 2drm_A           15 QTGDELTFKEGDTIIVHQKD-PAGWWEGEL--NGKRGWVPANYVQD   57 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEECC-TTSEEEEEE--TTEEEEEEGGGEEE
T ss_pred             CCcCCcCCCCCCEEEEEEec-CCCEEEEEE--CCcEEEEeHHHEEE
Confidence            34567888999999988875 467999987  67889999987764

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=90.69  E-value=0.22  Score=29.41  Aligned_cols=44  Identities=39%  Similarity=0.793  Sum_probs=34.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.. +..||.+++  ..+.|.||.+.+..+
T Consensus        14 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~   57 (58)
T 1sem_A           14 QESGELAFKRGDVITLINKD-DPNWWEGQL--NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             SSTTBCCBCTTCEEEEEECS-SSSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CCCCCcCCCCCCEEEEEEec-CCCEEEEEE--CCcEEEechHHeEEC
Confidence            34567888999999998874 467999997  578899999887653

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=90.64  E-value=0.17  Score=29.93  Aligned_cols=44  Identities=30%  Similarity=0.672  Sum_probs=35.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.. +..||.++.  +.+.|.||.+.+..+
T Consensus        14 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~   57 (58)
T 1zx6_A           14 QQDGDLGLKPGDKVQLLEKL-SPEWYKGSC--NGRTGIFPANYVKPA   57 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEEEC-SSSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CCCCCccCCCCCEEEEEEec-CCCEEEEEE--CCcEEEeeHHHEEEc
Confidence            34567888999999988775 467999995  678999999887654

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=90.56  E-value=0.31  Score=29.69  Aligned_cols=47  Identities=21%  Similarity=0.483  Sum_probs=37.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++.. +..||.++  .+.+.|.||.+.+..+...
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~--~~g~~G~fP~~yv~~~~~~   59 (65)
T 2nwm_A           13 QSPKELTLQKGDIVYIHKEV-DKNWLEGE--HHGRLGIFPANYVEVLPLE   59 (65)
T ss_dssp             CSTTBCCBCTTCEEEEEECC-TTTCEEEE--ETTEEEEECGGGEEECCCC
T ss_pred             CCcCccCCcCCCEEEEEEec-CCCEEEEE--ECCcEEEEehhhEEEcCCC
Confidence            34567888999999988775 46799998  4678999999988876544

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=90.55  E-value=0.22  Score=29.51  Aligned_cols=42  Identities=31%  Similarity=0.718  Sum_probs=33.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++. .+..||.+..  +.+.|.||.+.+.
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~-~~~~Ww~g~~--~g~~G~~P~~yv~   56 (58)
T 1zlm_A           15 RTPDELYFEEGDIIYITDM-SDTNWWKGTS--KGRTGLIPSNYVA   56 (58)
T ss_dssp             SSTTBCCBCTTCEEEEEEC-CSSSEEEEEE--TTEEEEEEGGGEE
T ss_pred             CCCCCccCCCCCEEEEEEe-CCCCEEEEEE--CCCEEEEehHHEE
Confidence            3456788899999999887 4567999985  6788999998765

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=90.54  E-value=0.19  Score=32.82  Aligned_cols=47  Identities=30%  Similarity=0.586  Sum_probs=38.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..|+.+.+++..  ..||.+.+..+.+.|.||.+.+..+..
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~~~~g~~G~~P~~yv~~~~~   61 (90)
T 3reb_B           15 WSPDDLSFQKGDQMVVLEES--GEWWKARSLATRKEGYIPSNYVARVDS   61 (90)
T ss_dssp             SSTTBCCBCTTCEEEEEECS--SSEEEEEETTTCCEEEEEGGGEEEECC
T ss_pred             CCcCcCCCCCCCEEEEEEeC--CCEEEEEECCCCCEEEEehhheEECCC
Confidence            44567888999999999874  469999987888999999998876543

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=90.46  E-value=0.31  Score=29.21  Aligned_cols=45  Identities=22%  Similarity=0.523  Sum_probs=35.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++.. +..||.+.  .+.+.|.||.+.+..+.
T Consensus        17 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~--~~g~~G~~P~~yv~~~~   61 (62)
T 1k4u_S           17 TQPEDLEFQEGDIILVLSKV-NEEWLEGE--SKGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CSSSBCCBCSSCEEEEEEES-SSSCEEEE--CSSCEEEECGGGCCCSC
T ss_pred             CCCCCccCCCCCEEEEEEeC-CCCEEEEE--ECCcEEEEeHHHEEECC
Confidence            34557888999999998875 46799998  46789999999887653

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=90.44  E-value=0.079  Score=43.97  Aligned_cols=31  Identities=10%  Similarity=0.051  Sum_probs=25.3

Q ss_pred             hCCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          35 VNNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        35 ~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      ...++|+|+.+.|  |++++...+.|+||+.+.
T Consensus       221 ~~~l~HgDl~~~N--il~~~~~~~~vIDwe~a~  251 (357)
T 3ats_A          221 EPVLLWGDARVGN--VLYRDFQPVAVLDWEMVA  251 (357)
T ss_dssp             CCEEECSSCSGGG--EEEETTEEEEECCGGGCE
T ss_pred             CceEEeCCCCCCe--EEEeCCcEEEEEcccccc
Confidence            3568999999999  888864567899998765

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=90.30  E-value=0.38  Score=29.96  Aligned_cols=48  Identities=27%  Similarity=0.637  Sum_probs=38.6

Q ss_pred             ccCCcccccCCCeEEEecCC-CCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++.. .+..||.+..  +.+.|.||.+.+..+...
T Consensus        21 ~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~--~g~~G~~P~~yv~~~~~~   69 (73)
T 2k9g_A           21 QNDDELTIKEGDIVTLINKDCIDVGWWEGEL--NGRRGVFPDNFVKLLPPD   69 (73)
T ss_dssp             SSTTBCCBCTTCEEEEEECCSSSTTEEEEEE--TTEEEEEEGGGEEECCSS
T ss_pred             CCCCeeeECCCCEEEEEECCCCCCCEEEEEE--CCeEEEEchHHEEECCcc
Confidence            34567888999999999876 4678999984  678999999988876543

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=90.28  E-value=0.18  Score=32.27  Aligned_cols=49  Identities=24%  Similarity=0.352  Sum_probs=38.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++...+..||.++  ...+.|.||.+.+..+....
T Consensus        22 ~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~--~~g~~G~fP~~yv~~~~~~~   70 (80)
T 2i0n_A           22 SDTSLLPFKRNDIITITFKDQENKWFMGQ--LNGKEGSFPVDHVEILLSDV   70 (80)
T ss_dssp             CSSSSCCBCSSEEEEEEEESSSSSEEEEE--ETTEEEEEEGGGEEEESSCC
T ss_pred             CCCCCcCCCCCCEEEEEEecCCCCEEEEE--ECCcEEEechHHEEECCCCC
Confidence            45567888999999999887655599998  46788999999888765543

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=90.22  E-value=0.37  Score=32.67  Aligned_cols=47  Identities=26%  Similarity=0.567  Sum_probs=38.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++.. +..||.+.+..+.+.|.||.+.+..+.
T Consensus        39 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~~~g~~G~~P~~yv~~~~   85 (109)
T 2yt6_A           39 RTTEDLSFKKGERFQIINNT-EGDWWEARSIATGKSGYIPSNYVVPAD   85 (109)
T ss_dssp             SSTTSCCCCTTCEEEEEECS-CTTCEEEEESSSCCEEEECTTTEEESS
T ss_pred             CCCCccCCCCCCEEEEEEcc-CCCcEEEEECCCCCEEEechHHcEECC
Confidence            34567888899999998876 467999998778899999999888764

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=90.17  E-value=0.25  Score=29.77  Aligned_cols=40  Identities=25%  Similarity=0.529  Sum_probs=31.9

Q ss_pred             cccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         197 KLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .+.+..++.+.+++... ..||.+++ ++.+.|.||.+-++-
T Consensus        20 ~Ls~~~Gd~i~v~~~~~-~~Ww~g~~-~~G~~G~fP~nyVe~   59 (60)
T 2lx7_A           20 GLRFAAGELITLLQVPD-GGWWEGEK-EDGLRGWFPASYVQL   59 (60)
T ss_dssp             CCCCCTTCEEEBSCCCT-TSCEEEEC-TTSCEEEECGGGEEE
T ss_pred             CccCCCCCEEEEeEecC-CCeEEEEe-CCCCEEEEcHHHEEE
Confidence            48899999999887654 57999984 456789999987754

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=90.15  E-value=0.3  Score=30.17  Aligned_cols=49  Identities=24%  Similarity=0.408  Sum_probs=38.5

Q ss_pred             ccCCcccccCCCeEEEecCC--CCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD--PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++..  ....||.++  ...+.|.||.+.+..+...+
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~~~~   69 (71)
T 2cre_A           19 DCSDELAFSRGDILTILEQHVPESEGWWKCL--LHGRQGLAPANRLQILSGPS   69 (71)
T ss_dssp             SSSSBCCCCSSCCEEEEESCCTTSTTEEEEE--SSSCCEEEETTTEEECCCST
T ss_pred             CCCCCCCCCCCCEEEEeEcCCCCCCCcEEEE--ECCCEEEEehHHEEECCCCC
Confidence            34567888899999998875  257799998  46788999999988876544

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.13  E-value=0.4  Score=31.19  Aligned_cols=49  Identities=20%  Similarity=0.424  Sum_probs=38.5

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCCC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPD  245 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  245 (251)
                      ....+.+..++.+.+++.. +..||++..  ..+.|.||.+.+..+......
T Consensus        31 ~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~fP~~yv~~~~~~~~~   79 (88)
T 2dbk_A           31 DKTALALEVGDIVKVTRMN-INGQWEGEV--NGRKGLFPFTHVKIFDPQNPD   79 (88)
T ss_dssp             CSSBCCBCTTCEEEEEEEC-TTSCEEEEC--SSCEEEECTTTEEECCSSCCT
T ss_pred             CCCcccCCCCCEEEEEEec-CCCEEEEEe--CCCEEEEehHHeEECCCCCcc
Confidence            4566888999999988875 567999963  578899999999887655543

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=90.10  E-value=0.13  Score=31.95  Aligned_cols=44  Identities=16%  Similarity=0.422  Sum_probs=35.7

Q ss_pred             CcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         196 GKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      ..+.+..++.+.+++.  +..||.+.+. +.+.|.||.+.+..+...
T Consensus        22 ~eLsf~~Gd~i~v~~~--~~~Ww~g~~~-~g~~G~~P~~yv~~~~~~   65 (70)
T 2vkn_A           22 YEISFEQNEILQVSDI--EGRWWKARRA-NGETGIIPSNYVQLIDGP   65 (70)
T ss_dssp             TBCCBCTTCEEEEECT--TSSEEEEECT-TSCEEEEEGGGEEEEEEE
T ss_pred             CcccCCCCCEEEEEEc--CCCeEEEEEC-CCCEEEEehHHEEECCCC
Confidence            4788899999998876  5679999865 778899999988876544

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=90.00  E-value=0.35  Score=29.87  Aligned_cols=48  Identities=15%  Similarity=0.316  Sum_probs=38.6

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++... ..||.+++.  .+.|.||.+.+..+....
T Consensus        20 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~--g~~G~~P~~yv~~~~~~~   67 (71)
T 2dnu_A           20 QSKDEIGFEKGVTVEVIRKNL-EGWWYIRYL--GKEGWAPASYLKKAKDSG   67 (71)
T ss_dssp             SSTTBCCBCTTCEEEECCCCS-SSEEEEEET--TEEEEEEGGGCEECCCCC
T ss_pred             CCCCCCcCCCCCEEEEeECCC-CCeEEEEEC--CcEEEEEHHHeEEccCCC
Confidence            345678888999999988754 679999976  788999999998886654

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=90.00  E-value=0.22  Score=30.67  Aligned_cols=47  Identities=23%  Similarity=0.473  Sum_probs=36.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++.. +..||.+..  +.+.|.||.+.+..+...
T Consensus        15 ~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~~   61 (68)
T 2ew3_A           15 ENQGELGFKEGDIITLTNQI-DENWYEGMI--HGESGFFPINYVEVIVPL   61 (68)
T ss_dssp             CSTTBCCBCTTCEEEEEEES-SSSEEEEEE--TTEEEEEEGGGEEESCC-
T ss_pred             CCCCccCCCCCCEEEEEEec-CCCEEEEEE--CCcEEEeeHHHEEEcCcc
Confidence            34567888999999998865 467999985  678999999988876543

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=90.00  E-value=0.42  Score=29.26  Aligned_cols=48  Identities=21%  Similarity=0.451  Sum_probs=37.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++... ..||.++  ...+.|.||.+.+..+...+
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~~~~   66 (68)
T 2djq_A           19 KNPGDLKFNKGDVILLRRQLD-ENWYQGE--INGVSGIFPASSVEVISGPS   66 (68)
T ss_dssp             CCTTCCCCCTTCEEEEEECCC-SSEEEEE--ETTEEEEEESSSEETTCSCC
T ss_pred             CCcCCccCCCCCEEEEEEecC-CCEEEEE--ECCcEEEeehHHEEEcCCCC
Confidence            345578888999999887744 6799998  36789999999988776544

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.99  E-value=0.38  Score=29.98  Aligned_cols=48  Identities=25%  Similarity=0.500  Sum_probs=38.2

Q ss_pred             ccCCcccccCCCeEEEecCCC-CCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++... +..||.++.  ..+.|.||.+.+..+...
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~~~   67 (73)
T 2dm1_A           19 RDMRELSLREGDVVRIYSRIGGDQGWWKGET--NGRIGWFPSTYVEEEGIQ   67 (73)
T ss_dssp             CSTTBCCBCTTCEEECCBSSSSSSSCEEEEE--TTEEEEECSSSEEECCCC
T ss_pred             CCCCcCCCCCCCEEEEEEecCCCCCeEEEEE--CCeEEEeehHHEEEcCCC
Confidence            345678889999999988765 457999984  678899999999887543

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=89.93  E-value=0.28  Score=29.67  Aligned_cols=45  Identities=31%  Similarity=0.623  Sum_probs=35.9

Q ss_pred             ccCCcccccCCCeEEEecCC-CCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.. .+..||.++.  +.+.|.||.+.+..+
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~~~~~W~~g~~--~g~~G~~P~~yv~~l   63 (64)
T 2jte_A           18 TNEDELTFREGEIIHLISKETGEAGWWKGEL--NGKEGVFPDNFAVQI   63 (64)
T ss_dssp             SSSSBCCBCTTCEEEEEESCSSSTTEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             cCCCccCCCCCCEEEEEECCCCCCCEEEEEE--CCeEEEEeHHHEEEC
Confidence            44567888999999999875 3678999984  678899999887654

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=89.89  E-value=0.22  Score=29.92  Aligned_cols=45  Identities=18%  Similarity=0.439  Sum_probs=35.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++...+..||.+..  ....|.||.+.+..+
T Consensus        17 ~~~~eLs~~~Gd~i~v~~~~~~~~W~~~~~--~g~~G~~P~~yv~~~   61 (63)
T 3eg3_A           17 SGDNTLSITKGEKLRVLGYNHNGEWCEAQT--KNGQGWVPSAYITPV   61 (63)
T ss_dssp             CSSSBCCBCTTCEEEEEEECTTSSEEEEEE--TTEEEEEEGGGEEES
T ss_pred             CCCCccCCCCCCEEEEEEeCCCCCeEEEEE--CCCeEEEehHHeEEC
Confidence            445678899999999998666667999986  466799999987764

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=89.72  E-value=0.24  Score=29.55  Aligned_cols=44  Identities=23%  Similarity=0.447  Sum_probs=34.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.. +..||.++.  ..+.|.||.+.+..+
T Consensus        16 ~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~~--~g~~G~~P~~yv~~l   59 (60)
T 1w70_A           16 NSKLELNFKAGDVIFLLSRI-NKDWLEGTV--RGATGIFPLSFVKIL   59 (60)
T ss_dssp             SSTTBCCBCTTCEEEEEEEC-SSSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CCCCCccCCCCCEEEEEEeC-CCCeEEEEE--CCCEEEechHHEEEC
Confidence            34456888999999988876 467999994  578899999987655

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=89.66  E-value=0.44  Score=29.15  Aligned_cols=48  Identities=21%  Similarity=0.506  Sum_probs=37.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. +..||.+.  .+.+.|.||...++.+....
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~--~~g~~G~~P~~yv~~~~~~~   66 (68)
T 2dl3_A           19 QTLKELPLQKGDIVYIYKQI-DQNWYEGE--HHGRVGIFPRTYIELLSGPS   66 (68)
T ss_dssp             SSTTBCCBCTTCEEEEEECC-STTEEEEE--CSSCEEEEETTTEEECCSCC
T ss_pred             CCcCCccCCCCCEEEEeEec-CCCEEEEE--ECCCEEEEchHHEEECCCCC
Confidence            34557888999999998864 46799998  46788999999998876543

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=89.59  E-value=0.39  Score=29.26  Aligned_cols=46  Identities=33%  Similarity=0.627  Sum_probs=36.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++.. +..||.+..  +.+.|.||.+.+..+..
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~-~~gWw~g~~--~g~~G~fP~~yv~~~~~   58 (65)
T 2fei_A           13 QNEDELELKVGDIIDINEEV-EEGWWSGTL--NNKLGLFPSNFVKELEL   58 (65)
T ss_dssp             CSTTBCCCCTTCEEECCCCS-SSSEEEEES--SSCEEEEETTTSCBCCC
T ss_pred             CCcCccCCCCCCEEEEEEec-CCCEEEEEE--CCcEEEecHHHEEEcCC
Confidence            34567888899999888764 577999984  68899999998877643

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=89.51  E-value=0.53  Score=30.94  Aligned_cols=50  Identities=26%  Similarity=0.418  Sum_probs=38.7

Q ss_pred             ccCCcccccCCCeEEEecCC-CCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. .+..||.++  ...+.|.||.+.+..+.....
T Consensus        17 ~~~~eLsf~~Gd~i~v~~~~~~~~gWw~g~--~~g~~G~~P~~yv~~~~~~~~   67 (93)
T 1uff_A           17 RNHDEMSFNSGDIIQVDEKTVGEPGWLYGS--FQGNFGWFPCNYVEKMPSSEN   67 (93)
T ss_dssp             CSSSCCCBCTTCEEEECSSCCCSSSEEEEE--ETTEEEEEETTTEEECCSSSS
T ss_pred             CCCCCcCCCCCCEEEEeEccCCCCCEEEEE--ECCCEEEechHHeEEcCCccc
Confidence            34567888999999998874 367899998  347889999998887765533

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=89.45  E-value=0.18  Score=41.23  Aligned_cols=29  Identities=14%  Similarity=-0.002  Sum_probs=24.5

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      ..++|+|+++.|  |+++ + .+.|+||+.+..
T Consensus       195 ~~l~HgD~~~~N--il~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          195 VLRLHGDCHAGN--ILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             CEECCSSCSGGG--EEES-S-SEEECCCTTCCE
T ss_pred             eeeeeCCCCccc--EeEc-C-CCEEEECCCCCc
Confidence            458999999999  8888 4 789999987754

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=89.41  E-value=0.39  Score=29.78  Aligned_cols=44  Identities=25%  Similarity=0.567  Sum_probs=34.6

Q ss_pred             cCC-cccccCCCeEEEecCCC----CCCcccccccceeeeecccCccccc
Q psy2787         194 EEG-KLYIDAGDQIVIIEGDP----ECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       194 ~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      ... .+.+..++.+.+++...    +..||.+++. ..+.|.||.+-+..
T Consensus        20 ~~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~-~G~~G~~PsnyV~~   68 (69)
T 1nm7_A           20 NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTK-NGNIGYIPYNYIEI   68 (69)
T ss_dssp             STTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEET-TTEEEEECGGGEEE
T ss_pred             CCCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeC-CCCEEEecHHHEEE
Confidence            344 78889999999998765    4689999863 47889999987654

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=89.25  E-value=0.61  Score=30.01  Aligned_cols=49  Identities=27%  Similarity=0.405  Sum_probs=38.4

Q ss_pred             ccCCcccccCCCeEEEecC-CCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEG-DPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++. ..+..||.+..  ..+.|.||.+.+..+....
T Consensus        20 ~~~~eLsf~~Gd~i~v~~~~~~~~~Ww~g~~--~g~~G~fP~~yv~~~~~~~   69 (85)
T 2dlp_A           20 DNCSLLSFHRGDLIKLLPVATLEPGWQFGSA--GGRSGLFPADIVQPAAAPD   69 (85)
T ss_dssp             SSSSBCCBCTTCEEEECCCSCCCTTEEEEES--SSCEEEEETTSEEECCCSC
T ss_pred             cCcCCccCcCCCEEEEEEccCCCCCeEEEEE--CCEEEEechHHeEECCCcC
Confidence            3456788889999999885 35578999986  5788999999988776544

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.21  E-value=0.36  Score=30.57  Aligned_cols=48  Identities=25%  Similarity=0.535  Sum_probs=38.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. +..||.++  .+.+.|.||.+.+..+....
T Consensus        29 ~~~~eLsf~~Gd~i~v~~~~-~~gWw~g~--~~g~~G~~P~~yv~~~~~~~   76 (78)
T 2ed0_A           29 DKEDELSFQEGAIIYVIKKN-DDGWYEGV--MNGVTGLFPGNYVESISGPS   76 (78)
T ss_dssp             SSTTBCCBCSSCEEEEEEEC-SSSEEEEE--ETTEEEEEETTSEEECSSSS
T ss_pred             cCcCcccccCCCEEEEEEeC-CCCEEEEE--ECCcEEEeChHHEEEcCCCC
Confidence            34567888999999988875 46799998  47889999999998776543

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=89.14  E-value=0.31  Score=31.85  Aligned_cols=51  Identities=24%  Similarity=0.511  Sum_probs=39.9

Q ss_pred             ccCCcccccCCCeEEEecCC-CCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD-PECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. .+..||.+++. ..+.|.||...++.+....+
T Consensus        29 ~~~~eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~-~g~~G~~P~~yv~~~~~~~~   80 (91)
T 1wx6_A           29 VTEEELNFEKGETMEVIEKPENDPEWWKCKNA-RGQVGLVPKNYVVVLSDGPA   80 (91)
T ss_dssp             SSSSBCCCCTTCEEEEEECCSSCTTEEEEECT-TCCEEEEEGGGEEEEEESSS
T ss_pred             CCCCcccCCCCCEEEEEECCCCCCCcEEEEeC-CCCEEEEchHHEEECCCcCC
Confidence            34567888999999999884 46789999853 47889999999888766544

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=89.07  E-value=0.24  Score=30.54  Aligned_cols=47  Identities=28%  Similarity=0.638  Sum_probs=37.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.  +..||.++.  ..+.|.||.+.++.+...+
T Consensus        20 ~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~--~g~~G~~P~~yv~~~~~~~   66 (69)
T 1uhf_A           20 VEPGDLTFTEGEEILVTQK--DGEWWTGSI--GDRSGIFPSNYVKPKDSGP   66 (69)
T ss_dssp             SSSSBCCBCTTCEEEECEE--ETTEEEECS--TTCCEEECGGGCEECCCCC
T ss_pred             CCcCccCCCCCCEEEEEEe--CCCEEEEEe--CCcEEEEchHHeEECCCCC
Confidence            3456788889999998876  577999983  5788999999998776544

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=88.95  E-value=0.2  Score=41.86  Aligned_cols=29  Identities=14%  Similarity=0.237  Sum_probs=23.6

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .++|+|+.+.|  |+++.+. +.|+||..+..
T Consensus       213 ~l~HgDl~~~N--il~~~~~-~~lID~e~a~~  241 (369)
T 3c5i_A          213 VFCHNDLQENN--IINTNKC-LRLIDFEYSGF  241 (369)
T ss_dssp             EEECSCCCGGG--EEECC-C-EEECCCTTCEE
T ss_pred             EEEeCCCCccc--EEecCCc-EEEEEecCCCC
Confidence            58999999999  8887554 88999987753

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=88.92  E-value=0.4  Score=29.19  Aligned_cols=46  Identities=22%  Similarity=0.473  Sum_probs=36.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++... ..||.+.+. ..+.|.||.+.+....
T Consensus        15 ~~~~eLsf~~Gd~i~v~~~~~-~~Ww~g~~~-~g~~G~~P~~yv~~~~   60 (65)
T 1b07_A           15 NDEEDLPFKKGDILRIRDKPE-EQWWNAEDS-EGKRGMIPVPYVEKYH   60 (65)
T ss_dssp             SSTTBCCBCTTCEEEEEECSS-SSEEEEECT-TSCEEEEEGGGEEECC
T ss_pred             CCCCccCCcCCCEEEEEEecC-CCeEEEEEC-CCCEEEEChHHEeecC
Confidence            345678889999999988754 679999854 4788999999876543

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.92  E-value=0.32  Score=32.29  Aligned_cols=49  Identities=16%  Similarity=0.400  Sum_probs=38.7

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      ....+.+..++.+.+++...+..||.++.  ..+.|.||.+.+..+.....
T Consensus        38 ~~~eLsf~~Gd~i~vl~~~~~~gWw~g~~--~g~~G~~P~~yv~~~~~~~~   86 (97)
T 2csq_A           38 AEEELPFKEGQIIKVYGDKDADGFYRGET--CARLGLIPCNMVSEIQADDE   86 (97)
T ss_dssp             HTTBCCBCTTCEEEEEEEECTTCEEEEEE--TTEEEEEETTTSEECCCCSC
T ss_pred             CCCccCCCCCCEEEEEEecCCCCeEEEEE--CCcEEEEehHHeEECCCCch
Confidence            35578888999999996655567999987  57899999999988765443

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=88.89  E-value=0.54  Score=29.34  Aligned_cols=45  Identities=24%  Similarity=0.349  Sum_probs=36.4

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      ....+.+..++.+.+++.. +..||.+..  ..+.|.||.+.+..+..
T Consensus        24 ~~~eLs~~~Gd~i~v~~~~-~~gWw~g~~--~g~~G~fP~~yv~~~~~   68 (73)
T 2ebp_A           24 DTDSLKLKKGDIIDIISKP-PMGTWMGLL--NNKVGTFKFIYVDVLSS   68 (73)
T ss_dssp             CCSBCCBCSSCEEEEEECC-SSSCEEEEC--SSCEEEECSTTEEECCC
T ss_pred             CCCccCCCCCCEEEEEEeC-CCCeEEEEE--CCCEEEEeHHHEEECCC
Confidence            4567888999999999885 577999974  56789999998887654

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=88.86  E-value=0.73  Score=29.12  Aligned_cols=50  Identities=22%  Similarity=0.517  Sum_probs=38.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPD  245 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  245 (251)
                      .....+.+..++.+.+++... ..||.++  .+.+.|.||...++.+.....+
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~~~~~~   68 (79)
T 2yun_A           19 RQDDELNLEKGDIVIIHEKKE-EGWWFGS--LNGKKGHFPAAYVEELPSNAGN   68 (79)
T ss_dssp             SSTTBCCBCTTCEEEEEECCS-SSCEEEE--SSSCEEEECSTTEEEESSCSSC
T ss_pred             CCCCCcCCCCCCEEEEEEcCC-CCEEEEE--ECCCEEEEEhHHeEECCCCCCC
Confidence            345678888999999888654 5799998  4678999999998887665543

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=88.57  E-value=0.31  Score=29.83  Aligned_cols=48  Identities=19%  Similarity=0.408  Sum_probs=37.3

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      ....+.+..++.+.+++.. +..||.|.  ...+.|.||.+.+..+....+
T Consensus        16 ~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~--~~g~~G~fP~~yv~~~~~~~~   63 (67)
T 2bzy_A           16 DKTALALEVGDIVKVTRMN-INGQWEGE--VNGRKGLFPFTHVKIFDPQNP   63 (67)
T ss_dssp             CTTBCCBCTTCEEEEEEEC-SSSEEEEE--ETTEEEEEEGGGEEECCSCC-
T ss_pred             CCCccccCCCCEEEEEEec-CCCeEEEE--eCCcEEEEehHHeEECCCcCc
Confidence            4567888999999988875 46799995  457889999999988765543

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=88.49  E-value=0.48  Score=28.88  Aligned_cols=46  Identities=22%  Similarity=0.489  Sum_probs=36.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++... ..||.+.+. ..+.|.||.+.+..+.
T Consensus        20 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~-~g~~G~~P~~yv~~~~   65 (67)
T 1aww_A           20 MNANDLQLRKGDEYFILEESN-LPWWRARDK-NGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             SSSSSCCCCSSCEEECCCCCS-SSEECCBCT-TSCBCCEETTTBCCSC
T ss_pred             CCCCCccCCCCCEEEEEEccC-CCcEEEEEC-CCCEEEEchHhEEEcC
Confidence            345578888999999888754 669999864 5788999999887654

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=88.43  E-value=0.22  Score=40.32  Aligned_cols=29  Identities=14%  Similarity=0.177  Sum_probs=24.1

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .++|+|+.+.|  |+ ..++.+.++||..+..
T Consensus       174 ~l~HgDl~~~N--il-~~~~~~~lID~e~a~~  202 (301)
T 3dxq_A          174 AACHCDPLCEN--FL-DTGERMWIVDWEYSGM  202 (301)
T ss_dssp             EEECSCCCGGG--EE-ECSSCEEECCCTTCEE
T ss_pred             eeeccCCCcCC--EE-ECCCCEEEEecccccC
Confidence            48999999999  77 5566789999987764

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=88.13  E-value=0.34  Score=29.77  Aligned_cols=46  Identities=22%  Similarity=0.421  Sum_probs=37.1

Q ss_pred             ccCCcccccCCCeEEEecCCC--CCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDP--ECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++...  +..||.++  ...+.|.||.+.+..+.
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~   62 (69)
T 1wyx_A           15 ESPDELSFRKGDIMTVLEQDTQGLDGWWLCS--LHGRQGIVPGNRLKILV   62 (69)
T ss_dssp             SSTTBCCBCTTCEEEEEETTGGGCTTEEEEE--ETTEEEEEEGGGEEEEE
T ss_pred             CCCCccCCcCCCEEEEeECCCCCCCCcEEEE--ECCcEEEechhhEEECC
Confidence            345678889999999998874  57899998  46788999999887654

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=88.11  E-value=0.34  Score=28.73  Aligned_cols=43  Identities=28%  Similarity=0.586  Sum_probs=33.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++... ..||.++.  +.+.|.||.+.+..
T Consensus        16 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~   58 (59)
T 2g6f_X           16 TNEDELSFSKGDVIHVTRVEE-GGWWEGTH--NGRTGWFPSNYVRE   58 (59)
T ss_dssp             SSTTBCCBCTTCEEEEEEECT-TSEEEEEE--TTEEEEEEGGGEEE
T ss_pred             CCcCCcCCCCCCEEEEEEecC-CCEEEEEE--CCcEEEEeHHHEEE
Confidence            345678888999999887654 67999985  67889999987764

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=88.09  E-value=0.21  Score=41.36  Aligned_cols=31  Identities=13%  Similarity=0.136  Sum_probs=27.0

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      ..++|+|+.+.|  |+++.++.+.|+||+.+..
T Consensus       206 ~~~~HgD~~~~N--~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          206 YVLCHSDIHAGN--VLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             CEEECSCCCGGG--EEECGGGCEEECCCSSCEE
T ss_pred             ceeEeCCCCcCC--EEEeCCCeEEEEECCCCee
Confidence            368999999999  9998878899999987764

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.91  E-value=0.79  Score=29.10  Aligned_cols=50  Identities=20%  Similarity=0.365  Sum_probs=39.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPD  245 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  245 (251)
                      .....+.+..++.+.+++... ..||.++.  ..+.|.||.+.+..+.....+
T Consensus        20 ~~~~eLs~~~Gd~i~vl~~~~-~gWw~g~~--~g~~G~~P~~yv~~~~~~~~~   69 (80)
T 2ekh_A           20 VQDSEISFPAGVEVQVLEKQE-SGWWYVRF--GELEGWAPSHYLVLDENEQPD   69 (80)
T ss_dssp             SSTTSCCBCTTCEEEEEEECT-TSEEEEEE--TTEEEEEETTTEECCCCCCCC
T ss_pred             CCCCccCcCCCCEEEEEEeCC-CCeEEEEE--CCCEEEEEhHHeEECCCCCCC
Confidence            345678888999999988764 67999984  378899999999887665543

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.90  E-value=0.35  Score=30.09  Aligned_cols=48  Identities=15%  Similarity=0.387  Sum_probs=37.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. +..||.++.  +.+.|.||.+.+..+....
T Consensus        21 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~~~   68 (72)
T 2dl8_A           21 RTARELSFKKGASLLLYQRA-SDDWWEGRH--NGIDGLIPHQYIVVQDTSG   68 (72)
T ss_dssp             SSSSBCCBCTTCEEEEEEEE-ETTEEEEEE--TTEEEEECSSSEEECCSSS
T ss_pred             CCCCEeccCCCCEEEEEeec-CCCEEEEEE--CCEEEEEchHHeEEcCCCC
Confidence            34557888899999988865 357999997  6789999999988765544

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=87.90  E-value=0.45  Score=28.71  Aligned_cols=44  Identities=27%  Similarity=0.530  Sum_probs=34.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.. +..||.+.  .+.+.|.||.+.++.+
T Consensus        21 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~--~~g~~G~~P~~yv~~~   64 (65)
T 3ulr_B           21 AGDDEISFDPDDIITNIEMI-DDGWWRGV--CKGRYGLFPANYVELR   64 (65)
T ss_dssp             CSTTBCCBCTTCEEEEEECC-SSSEEEEE--ETTEEEEEEGGGEEEC
T ss_pred             CCcCEeeEecCCEEEEEEec-CCCEEEEE--ECCcEEEEehHHeEEC
Confidence            34557888999999988876 45799998  4678899999877653

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.88  E-value=0.35  Score=30.36  Aligned_cols=46  Identities=22%  Similarity=0.360  Sum_probs=36.9

Q ss_pred             CCcccccCCCeEEEecCCCCCCcccccccce--eeeecccCcccccCcC
Q psy2787         195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLST--FNIGMFPRNIMDPMRR  241 (251)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~p~~~~~~~~~  241 (251)
                      ...+.+..++.+.+++.. ...||.++...+  .+.|.||.+.+..+..
T Consensus        23 ~~eLs~~~Gd~i~vl~~~-~~gWw~g~~~~~~~g~~G~~P~~yv~~~~~   70 (75)
T 2egc_A           23 EETAGFQEGVSMEVLERN-PNGWWYCQILDGVKPFKGWVPSNYLEKKNS   70 (75)
T ss_dssp             SSSCCBCTTCEEEECEEC-TTSEEEEEECCSSSCEEEEEEGGGEEECCS
T ss_pred             CCcCCCCCCCEEEEEEcC-CCCeEEEEeCCCCCCcEEEEehHHCEECCC
Confidence            556888899999998876 466999997664  4889999998887653

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=87.85  E-value=0.48  Score=28.57  Aligned_cols=45  Identities=27%  Similarity=0.598  Sum_probs=35.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++... ..||.++.  +.+.|.||.+.+..+.
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   62 (64)
T 2ak5_A           18 TNEDELSFSKGDVIHVTRVEE-GGWWEGTH--NGRTGWFPSNYVREIK   62 (64)
T ss_dssp             CSTTBCCBCTTCEEEEEECCT-TSEEEEEE--TTEEEEEEGGGEEECC
T ss_pred             cCcCcccCCCCCEEEEeEecC-CCEEEEEE--CCCEEEEehHHeEEcC
Confidence            345678889999999888654 67999985  6789999999887653

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=87.80  E-value=0.22  Score=42.72  Aligned_cols=17  Identities=18%  Similarity=0.452  Sum_probs=14.1

Q ss_pred             CcccCCCCCCCceEEEccC
Q psy2787          37 NICSCQFSSSSLLILFFSS   55 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~   55 (251)
                      .++|+|+.+.|  |+++.+
T Consensus       250 v~~H~Dl~~gN--iL~~~~  266 (429)
T 1nw1_A          250 TFCHNDLQEGN--ILLPKA  266 (429)
T ss_dssp             EEECSCCCGGG--EEEEC-
T ss_pred             EEEeCCCCCCe--EEeeCC
Confidence            58999999999  888764

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=87.79  E-value=0.43  Score=29.17  Aligned_cols=46  Identities=28%  Similarity=0.694  Sum_probs=36.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++... ..||.+.+. ..+.|.||.+.+..+.
T Consensus        22 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~-~g~~G~~P~~yv~~~~   67 (68)
T 1s1n_A           22 QQVGDLTFKKGEILLVIEKKP-DGWWIAKDA-KGNEGLVPRTYLEPYS   67 (68)
T ss_dssp             SSSSCCCBCSSEEEEECSCCS-SSEEEEECS-SSCEEEEESTTEEECC
T ss_pred             CCCCcCCCCCCCEEEEEEcCC-CCeEEEEEC-CCCEEEEehHHeEECc
Confidence            345678888999999888754 579999863 6788999999887653

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=87.79  E-value=0.54  Score=29.24  Aligned_cols=46  Identities=15%  Similarity=0.416  Sum_probs=37.4

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      ....+.+..++.+.+++... ..||.+.  ...+.|.||.+.+..+...
T Consensus        12 ~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~~~   57 (73)
T 2kxd_A           12 GGREVTMKKGDILTLLNSTN-KDWWKVE--VNDRQGFVPAAYVKKLDSG   57 (73)
T ss_dssp             CSCCCCBCTTCEEEEEECCS-SSEEEEE--ETTEEEEEEGGGEEECCSS
T ss_pred             CCCEeeEcCCCEEEEEEecC-CCEEEEE--ECCCEEEEehHHeEEcCCC
Confidence            45678889999999998764 6799997  5678899999998877554

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.70  E-value=0.56  Score=30.21  Aligned_cols=48  Identities=15%  Similarity=0.446  Sum_probs=37.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++... ..||.+++ .+.+.|.||.+.+..+...
T Consensus        31 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~-~~g~~G~~P~~yv~~~~~~   78 (85)
T 2yuq_A           31 NDPQELALRRNEEYCLLDSSE-IHWWRVQD-RNGHEGYVPSSYLVEKSPN   78 (85)
T ss_dssp             SCSSBCCCCBTEEEEEEECCS-SSEEEEEC-SSSCEEEEETTTCEECCCC
T ss_pred             CCCCcCCCCCCCEEEEEEecC-CCeEEEEE-CCCCEEEEehHHeEEccCC
Confidence            445678888999999998774 57999976 5578899999998886443

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=87.69  E-value=0.37  Score=31.17  Aligned_cols=42  Identities=19%  Similarity=0.568  Sum_probs=33.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++.  +..||.+.+. +.+.|.||.+.+.
T Consensus        43 ~~~~eLs~~~Gd~i~v~~~--~~~Ww~g~~~-~g~~G~~P~~yv~   84 (86)
T 2jxb_A           43 QQDQELDIKKNERLWLLDD--SKTWWRVRNA-ANRTGYVPSNYVE   84 (86)
T ss_dssp             CSSSBCCCCTTEEEEEEEC--CSSEEEEECT-TSCEEEEEGGGBC
T ss_pred             CCCCEeccCCCCEEEEEec--CCCeEEEEEC-CCCEEEeehHHEE
Confidence            3456788889999999987  4679999865 6788999998765

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=87.67  E-value=0.41  Score=29.80  Aligned_cols=45  Identities=24%  Similarity=0.507  Sum_probs=36.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccce-eeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLST-FNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++..  ..||.+.+.++ .+.|.||.+.+...
T Consensus        23 ~~~~eLs~~~Gd~i~v~~~~--~~W~~g~~~~~~g~~G~~P~~yv~~~   68 (74)
T 2m0y_A           23 RGADELSLQIGDTVHILETY--EGWYRGYTLRKKSKKGIFPASYIHLK   68 (74)
T ss_dssp             CSSSBCCEETTEEEEEEEBS--SSCEEEEESSCSSCCEEECGGGEEEC
T ss_pred             CCcCcccCCCCCEEEEEEcC--CCeEEEEECCCCCCEEEEehHHEEEe
Confidence            44567888999999998875  56999998665 88899999987754

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=87.62  E-value=0.6  Score=30.69  Aligned_cols=49  Identities=27%  Similarity=0.579  Sum_probs=38.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. +..||.+..  +.+.|.||.+.+..+.....
T Consensus        30 ~~~~eLsf~~Gd~i~V~~~~-~~gWw~g~~--~g~~G~fPsnyV~~~~~~~~   78 (92)
T 2o2o_A           30 QNDDELELKVGDIIEVVGEV-EEGWWEGVL--NGKTGMFPSNFIKELSGESD   78 (92)
T ss_dssp             CSSSCCCBCSSCEEECCCGG-GSSCBCCEE--TTEECCBCSSSEECCSSCSS
T ss_pred             CCCccccccCCCEEEEeEec-CCCEEEEEE--CCeEEEeehHHEEECCCCCc
Confidence            34567888899999988764 467999985  67899999999988776554

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=87.61  E-value=0.66  Score=29.34  Aligned_cols=47  Identities=19%  Similarity=0.421  Sum_probs=37.5

Q ss_pred             ccCCcccccCCCeEEEecCCC---CCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDP---ECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++...   ...||.++  ...+.|.||.+.+..+..
T Consensus        25 ~~~~eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~--~~g~~G~~P~~yv~~~~~   74 (79)
T 1uhc_A           25 RNPNELSVSANQKLKILEFKDVTGNTEWWLAE--VNGKKGYVPSNYIRKTES   74 (79)
T ss_dssp             CSSSBCCBCTTCEEEEEESCCTTSCTTEEEEE--SSSCEEEEEGGGEEECCS
T ss_pred             CCCCccCCCCCCEEEEEECCCCCCCCCeEEEE--eCCCEEEEchHHeEECCC
Confidence            345678889999999998765   47899997  567889999999887653

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=87.58  E-value=0.26  Score=30.60  Aligned_cols=45  Identities=24%  Similarity=0.440  Sum_probs=34.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccce-eee---ecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLST-FNI---GMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~p~~~~~~~  239 (251)
                      .....+.+..|+.+.+ +. .+..||.+.+.++ .+.   |.||.+.+..+
T Consensus        22 ~~~~eLs~~~Gd~i~v-~~-~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~   70 (72)
T 2kgt_A           22 RTDEELSFRAGDVFHV-AR-KEEQWWWATLLDEAGGAVAQGYVPHNYLAER   70 (72)
T ss_dssp             SSTTSCBCCTTCCEEE-EE-ECSSCEEEEEECTTSCEEEEEEECTTTSEEE
T ss_pred             CCcCCcCCCCCCEEEE-ee-CCCCEEEEEEcCCCCCEeCCcEEcHhHEEEc
Confidence            3455788889999888 54 4577999998776 788   99999987654

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=87.57  E-value=0.49  Score=30.75  Aligned_cols=48  Identities=23%  Similarity=0.557  Sum_probs=38.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++... ..||.+..  +.+.|.||...+..+....
T Consensus        29 ~~~~eLs~~~Gd~i~v~~~~~-~gWw~g~~--~g~~G~~P~~yv~~~~~~~   76 (88)
T 2cub_A           29 EREDELSLIKGTKVIVMEKCS-DGWWRGSY--NGQVGWFPSNYVTEEGDSP   76 (88)
T ss_dssp             CSTTBCCCCTTEEEEEEEECT-TSEEEEEE--TTEEEEEEGGGEEECCCCC
T ss_pred             CCCCCcCCCCCCEEEEEEccC-CCeEEEEE--CCcEEEEehHHEEECCCcc
Confidence            345678888999999888764 57999986  6789999999888775443

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=87.44  E-value=0.3  Score=42.31  Aligned_cols=15  Identities=33%  Similarity=0.689  Sum_probs=13.4

Q ss_pred             CcccCCCCCCCceEEEc
Q psy2787          37 NICSCQFSSSSLLILFF   53 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~   53 (251)
                      .++|+|+.+.|  |+++
T Consensus       291 v~cHnDl~~gN--IL~~  305 (458)
T 2qg7_A          291 VLCHCDLLSSN--IINT  305 (458)
T ss_dssp             EEECSCCCGGG--EEEC
T ss_pred             eEEecCCCCCc--EEee
Confidence            58999999999  8877

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=87.43  E-value=0.14  Score=34.92  Aligned_cols=50  Identities=18%  Similarity=0.306  Sum_probs=37.5

Q ss_pred             ccCCcccccCCCeEEEecCC--CCCCcccccccce------eeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD--PECHWWKGQNLST------FNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..|+.+.+++..  ....||.|+...+      .+.|.||.+.+..+...
T Consensus        34 ~~~~ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~~~~   91 (108)
T 1i1j_A           34 PDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTL   91 (108)
T ss_dssp             SSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEEC
T ss_pred             CCCCccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEcccc
Confidence            44567888999999998873  2234999996544      78899999988765533

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=87.40  E-value=0.28  Score=41.33  Aligned_cols=31  Identities=13%  Similarity=0.116  Sum_probs=25.3

Q ss_pred             hCCcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          35 VNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        35 ~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      ...++|+|+.+.|  |+++.+ .+++.||..+..
T Consensus       226 ~~~L~HGDl~~~N--il~~~~-~~~lID~e~a~~  256 (397)
T 2olc_A          226 AETLIHGDLHTGS--IFASEH-ETKVIDPEFAFY  256 (397)
T ss_dssp             CCEEECSCCSGGG--EEECSS-CEEECCCTTCEE
T ss_pred             CCceeeCCCCcCc--EEEeCC-CeEEEeCccccc
Confidence            3578999999999  888765 488999987763

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=87.38  E-value=0.67  Score=27.88  Aligned_cols=45  Identities=16%  Similarity=0.434  Sum_probs=35.3

Q ss_pred             CCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      ...+.+..++.+.+++... ..||.+.  ...+.|.||.+.+..+...
T Consensus         3 ~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~~~   47 (63)
T 1tuc_A            3 PREVTMKKGDILTLLNSTN-KDWWKVE--VNDRQGFVPAAYVKKLDSG   47 (63)
T ss_dssp             CCCCCBCTTCEEEEEECCS-SSEEEEE--ETTEEEEEEGGGEEECSCS
T ss_pred             ccccCCCCCCEEEEEEecC-CCEEEEE--ECCcEEEEeHHHEEEcCCC
Confidence            3457788899999988765 5699996  5678899999988876543

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=87.35  E-value=0.076  Score=34.27  Aligned_cols=49  Identities=27%  Similarity=0.489  Sum_probs=38.2

Q ss_pred             ccCCcccccCCCeEEEecCC--------------CCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGD--------------PECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++..              .+..||.+.+..+.+.|.||.+.+..+..
T Consensus        17 ~~~~eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~yV~~~~~   79 (83)
T 3i5r_A           17 EREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGR   79 (83)
T ss_dssp             CSTTBCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             CCCCccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehHHEEECCc
Confidence            45667888999999988531              12379999988889999999998877654

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=87.28  E-value=0.28  Score=32.21  Aligned_cols=50  Identities=24%  Similarity=0.582  Sum_probs=38.3

Q ss_pred             cCC-cccccCCCeEEEecCCCC----CCcccccccceeeeecccCcccccCcCCCC
Q psy2787         194 EEG-KLYIDAGDQIVIIEGDPE----CHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       194 ~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      ... .+.+..|+.+.+++....    ..||.+++ ++.+.|.||.+.+..+....+
T Consensus        27 ~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~-~~g~~G~~P~~yv~~~~~~~~   81 (92)
T 1jqq_A           27 NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRT-KNGNIGYIPYNYIEIIKRRKK   81 (92)
T ss_dssp             STTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEE-TTSCEEEEEGGGEEECCCC--
T ss_pred             CCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEe-CCCCEEEEehHHeEECCCCCC
Confidence            345 788899999998887653    47999986 567899999999888765443

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=87.22  E-value=0.24  Score=31.48  Aligned_cols=48  Identities=25%  Similarity=0.600  Sum_probs=36.5

Q ss_pred             ccCC-cccccCCCeEEEecCCCC----CCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEG-KLYIDAGDQIVIIEGDPE----CHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .... .+.+..++.+.+++....    ..||.+++ ++.+.|.||.+.+..+.+
T Consensus        26 ~~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~-~~g~~G~~P~~yv~~~~~   78 (80)
T 2v1r_A           26 ENPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRT-KNGNIGYIPYNYIEIIKR   78 (80)
T ss_dssp             SSTTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEC-TTSCEEEEEGGGEEEC--
T ss_pred             CCCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEe-CCCCeEEEEHHHeEEcCC
Confidence            3445 788899999998887653    47999986 467899999998887654

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=87.15  E-value=0.4  Score=29.97  Aligned_cols=46  Identities=17%  Similarity=0.441  Sum_probs=37.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++...+..||.++.  ..+.|.||.+.+..+.
T Consensus        21 ~~~~eLs~~~Gd~i~v~~~~~~~~Ww~g~~--~g~~G~~P~~yv~~~~   66 (74)
T 1gbq_A           21 TADDELSFKRGDILKVLNEECDQNWYKAEL--NGKDGFIPKNYIEMKP   66 (74)
T ss_dssp             SSTTBCCBCTTCEEECCBCSSCSSEEEEEE--TTEEEEEEGGGEEEEC
T ss_pred             CCCCeeeEcCCCEEEEeEecCCCCEEEEEE--CCCEEEEehHhEEEcC
Confidence            345678889999999998876667999983  6788999999887543

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=87.08  E-value=0.64  Score=28.45  Aligned_cols=48  Identities=15%  Similarity=0.340  Sum_probs=37.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++... ..||.+.  .+.+.|.||.+.+..+....
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~~~~   66 (68)
T 2dmo_A           19 ETKEELQVMPGNIVFVLKKGN-DNWATVM--FNGQKGLVPCNYLEPVSGPS   66 (68)
T ss_dssp             CSSSSCCCCTTCEEEECEECS-SSCEEEE--ETTEEEEECSTTEEECCCSC
T ss_pred             CCcCCCCCCCCCEEEEEEeCC-CCEEEEE--eCCCEEEeehHHeEECCCCC
Confidence            345578888999999887655 6799885  56788999999988876543

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=87.00  E-value=0.75  Score=28.97  Aligned_cols=46  Identities=15%  Similarity=0.419  Sum_probs=36.2

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      ....+.+..++.+.+++... ..||.++  .+.+.|.||.+.+..+...
T Consensus         4 ~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~~~   49 (77)
T 2jmc_A            4 GPREVTMKKGDILTLLNSTN-KDWWKVE--VNDRQGFVPAAYVKKLDSG   49 (77)
T ss_dssp             SSCCCCCCTTCEEECCCCCC-SSCCCEE--ETTEEECCCGGGEEECCCS
T ss_pred             CCCccCCCCCCEEEEEEecC-CCEEEEE--ECCcEEEEEeeEEEEcCCC
Confidence            34567788999999888764 6699997  5678899999988876543

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=86.96  E-value=0.48  Score=27.80  Aligned_cols=44  Identities=27%  Similarity=0.560  Sum_probs=34.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.. ...||.+  ..+.+.|.||.+.+...
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~-~~~W~~g--~~~g~~G~~P~~yv~~~   56 (58)
T 4e6r_A           13 EREDELSLVXGSRVTVMEXC-SDGWWRG--SYNGQIGWFPSNYVLEE   56 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEEEC-TTSEEEE--EETTEEEEEEGGGEEEC
T ss_pred             CCCCEeeEeCCCEEEEeEcC-CCCEEEE--EECCcEEEEehHHEEEC
Confidence            34566888999999988776 4679999  46678899999887653

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=86.87  E-value=0.56  Score=27.94  Aligned_cols=44  Identities=18%  Similarity=0.468  Sum_probs=34.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++... ..||.++.  ..+.|.||.+.+..+
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~--~g~~G~~P~~yv~~~   61 (62)
T 3ngp_A           18 KSPRELTVKKGDILTLLNSTN-KDWWKIEV--NGRQGFVPAAYLKKL   61 (62)
T ss_dssp             CSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CCCCCccCCCCCEEEEeEecC-CCeEEEEE--CCEEEEEEHHHEEEC
Confidence            345678889999999988764 67999984  578899999887654

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=86.68  E-value=0.58  Score=29.17  Aligned_cols=47  Identities=21%  Similarity=0.502  Sum_probs=37.4

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      ....+.+..++.+.+++..  ..||.++.  ..+.|.||.+.+..+.....
T Consensus        23 ~~~eLs~~~Gd~i~v~~~~--~~Ww~g~~--~g~~G~~P~~yv~~~~~~~~   69 (74)
T 1j3t_A           23 KDNHLNFSKHDIITVLEQQ--ENWWFGEV--HGGRGWFPKSYVKIIPGSES   69 (74)
T ss_dssp             STTBCCBCTTCEEEEEEEC--SSEEEEES--TTCCCEEEGGGEEECCCSTT
T ss_pred             CCCccCCCCCCEEEEEecC--CCEEEEEE--CCcEEEEchHHeEECCCCCC
Confidence            4456888999999998884  56999996  47789999999988765443

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=86.56  E-value=0.26  Score=34.02  Aligned_cols=47  Identities=26%  Similarity=0.494  Sum_probs=36.8

Q ss_pred             ccCCcccccCCCeEEEecC----CCCCCcccccccce--------eeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEG----DPECHWWKGQNLST--------FNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--------~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.    ..+..||.+.+.++        .+.|.||.+.+..+
T Consensus        56 ~~~dELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~~l  114 (115)
T 1bb9_A           56 TDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV  114 (115)
T ss_dssp             SSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             CCCCccCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHEEEC
Confidence            3456688899999999983    45578999987665        77899999887654

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=86.48  E-value=0.44  Score=30.01  Aligned_cols=44  Identities=16%  Similarity=0.481  Sum_probs=34.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..|+.+.+++... ..||.+.+ .+.+.|.||.+.+..
T Consensus        32 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~-~~g~~G~~P~~yv~~   75 (77)
T 1awj_A           32 NDPQELALRCDEEYYLLDSSE-IHWWRVQD-KNGHEGYAPSSYLVE   75 (77)
T ss_dssp             CCTTSCCBCSSSCCSCCCTTS-SSBCCCCC-SSSCCCCCBSTTCCC
T ss_pred             CCcCCcCCCCCCEEEEEEecC-CCCEEEEE-CCCCEEEEehHHEEE
Confidence            345578888999988887754 57999987 667889999988764

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=86.40  E-value=0.66  Score=28.72  Aligned_cols=48  Identities=17%  Similarity=0.430  Sum_probs=36.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++... ..||.++  ...+.|.||.+.++.+....
T Consensus        17 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~~~~~~   64 (73)
T 3thk_A           17 KSPREVTMKKGDILTLLNSTN-KDWWKVE--VNDRQGFVPAAYVKKLDPAQ   64 (73)
T ss_dssp             CSTTBCCBCTTCEEEEEECCS-SSEEEEE--ETTEEEEEEGGGEEECCC--
T ss_pred             CCCCccCCCCCCEEEEEECCC-CCeEEEE--ECCcEEEEehHHeEECCCCC
Confidence            445678889999999988764 5699998  34688999999998776543

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=86.33  E-value=0.49  Score=28.92  Aligned_cols=45  Identities=16%  Similarity=0.371  Sum_probs=35.1

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      ....+.+..++.+.+++.. +..||.+.  ...+.|.||.+.+..+..
T Consensus        21 ~~~eLs~~~Gd~i~v~~~~-~~gWw~g~--~~g~~G~fP~~yv~~~~~   65 (67)
T 2eyx_A           21 DKTALALEVGELVKVTKIN-VSGQWEGE--CNGKRGHFPFTHVRLLDQ   65 (67)
T ss_dssp             CSSBCCBCSSEEEEEEEEC-TTSEEEEE--ETTEEEEEEGGGBCCBCS
T ss_pred             CCCccccCCCCEEEEEEec-CCCEEEEE--ECCCEEEEehHhEEEcCC
Confidence            3457888899999888765 46799995  357889999998887643

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=86.32  E-value=0.45  Score=29.18  Aligned_cols=45  Identities=29%  Similarity=0.497  Sum_probs=35.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..|+.+.+++... ..||.+.. .+.+.|.||.+.+...
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~-~~g~~G~~P~~yv~~~   62 (69)
T 4esr_A           18 NRSDELTIHRGDIIRVFFKDN-EDWWYGSI-GKGQEGYFPANHVASE   62 (69)
T ss_dssp             CSTTBCCBCTTCEEEEEEECS-SSEEEEEE-ETTEEEEEEGGGEEEH
T ss_pred             CCcCcCCCCCCCEEEEEEecC-CCeEEEEe-CCCCEEEEchHHeEEC
Confidence            445678889999999887654 56999974 5678899999987654

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=86.29  E-value=0.38  Score=40.59  Aligned_cols=29  Identities=24%  Similarity=0.337  Sum_probs=24.9

Q ss_pred             CcccCCCCCCCceEEEccC----CceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSS----SSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~----~~~kl~DFGla~   67 (251)
                      .++|+|+.+.|  |+++.+    +.+.++||..+.
T Consensus       221 ~~~H~D~~~~N--il~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          221 VFCHNDIQEGN--ILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             EEECSCCCGGG--EEEESCC---CCEEECCCTTCE
T ss_pred             EEEcCCCCCCe--EEEcCCCCccCcEEEEecccCC
Confidence            58999999999  888766    688999998775

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=86.06  E-value=0.23  Score=32.59  Aligned_cols=49  Identities=22%  Similarity=0.325  Sum_probs=38.1

Q ss_pred             ccCCcccccCCCeEEEecC------------CCCC--CcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEG------------DPEC--HWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~------------~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++.            ....  .||.+.+.++.+.|.||.+.+..+..
T Consensus        23 ~~~~ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~fP~nyVe~i~~   85 (90)
T 3o5z_A           23 ERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLGP   85 (90)
T ss_dssp             CSTTBCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEEEGGGEEEEEE
T ss_pred             CCCCccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEeehHHEEEecc
Confidence            4566788899999998842            1122  69999988889999999998887654

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=85.74  E-value=0.93  Score=28.79  Aligned_cols=47  Identities=26%  Similarity=0.458  Sum_probs=37.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++.. +..||.++..  .+.|.||.+.+..+...
T Consensus        22 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~--g~~G~~P~~yv~~~~~~   68 (81)
T 2ysq_A           22 MANRELAFKAGDVIKVLDAS-NKDWWWGQID--DEEGWFPASFVRLWVNQ   68 (81)
T ss_dssp             SSSSSCCCCTTCEEEEEECC-SSSEEEEECS--SCEEEEEGGGEEESSCC
T ss_pred             CCCCcCCCCCCCEEEEEEEc-CcCEEEEEEC--CCEEEechHHEEEcCCc
Confidence            34556888899999999876 4779999953  77899999988877543

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=85.70  E-value=1  Score=27.50  Aligned_cols=48  Identities=25%  Similarity=0.440  Sum_probs=36.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++... ..||.++.. ....|.||.+.+..+...
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~-~~~~G~~P~~yv~~~~~~   66 (69)
T 2eqi_A           19 KRSDELTFCRGALIHNVSKEP-GGWWKGDYG-TRIQQYFPSNYVEDISGP   66 (69)
T ss_dssp             CSSSCCCBCTTCEEESCCCCS-SSCEEEEET-TEEEEEECGGGEEECCSC
T ss_pred             CCcCccCCCCCCEEEEEEcCC-CCeEEEEEC-CCCEEEEchHHcEECccC
Confidence            345678888999999888754 579999854 455699999998876543

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=85.03  E-value=1.1  Score=32.12  Aligned_cols=47  Identities=28%  Similarity=0.572  Sum_probs=38.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..|+.+.+++...+..||.+..  ..+.|.||.+.+..+..
T Consensus        17 ~~~~ELsf~~Gd~i~Vl~~~~~~gWw~g~~--~g~~G~fP~~yv~~~~~   63 (142)
T 2kbt_A           17 RDRSELSLKEGDIIKILNKKGQQGWWRGEI--YGRIGWFPSNYVEEDYS   63 (142)
T ss_dssp             SSSSBCCCCTTCEEEEEECCCSSSEEEEEE--TTEEEEEETTSEEESSC
T ss_pred             CCCCcCCCCCCCEEEEEEecCCCCeEEEEE--CCeeEEechHHEEEccc
Confidence            345678889999999998765678999995  67889999998887654

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=84.98  E-value=1.3  Score=27.87  Aligned_cols=49  Identities=22%  Similarity=0.435  Sum_probs=37.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. +..||.++.  ..+.|.||.+.+..+.....
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~~~~   67 (78)
T 2yuo_A           19 HDDDELGFRKNDIITIISQK-DEHCWVGEL--NGLRGWFPAKFVEVLDERSK   67 (78)
T ss_dssp             SSTTBCCBCTTCEEEEEECC-SSSEEEEEE--TTEEEEEEGGGEEEECCCCS
T ss_pred             CCCCCccCCCCCEEEEEEec-CCCEEEEEE--CCCEEEEehHHEEECCCcCC
Confidence            34567888999999998865 467998873  57789999999887765443

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.70  E-value=0.8  Score=28.11  Aligned_cols=48  Identities=21%  Similarity=0.451  Sum_probs=37.6

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++... ..||.++..  .+.|.||.+.++.+....
T Consensus        20 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~~--g~~G~~P~~yv~~~~~~~   67 (70)
T 2ega_A           20 QENSELSLQAGEVVDVIEKNE-SGWWFVSTS--EEQGWVPATYLEAQNSGP   67 (70)
T ss_dssp             CSSSSCCCCTTCBCEEEEECT-TSEEEEECS--SCEEEEEGGGCEESCCCC
T ss_pred             CCCCcccCCCCCEEEEEEccC-CCeEEEEEC--CCEEEEehHHcEECCCCC
Confidence            345678888999999888754 679999853  688999999988776543

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=84.69  E-value=0.53  Score=29.56  Aligned_cols=48  Identities=19%  Similarity=0.448  Sum_probs=37.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++... ..||.++.  ..+.|.||.+.+..+....
T Consensus        22 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~~~~   69 (76)
T 2epd_A           22 RTAQELSFRRGDVLRLHERAS-SDWWRGEH--NGMRGLIPHKYITLPAGTE   69 (76)
T ss_dssp             SSTTBCEECTTCEEEEEEEEE-TTEEEEEE--TTEEEEEESSSEECCSSCS
T ss_pred             CCCCccCCCCCCEEEEEEeCC-CCEEEEEE--CCcEEEEehHHEEEcCCCC
Confidence            345678889999999888753 67999996  6788999999888765543

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=84.67  E-value=0.96  Score=26.99  Aligned_cols=43  Identities=28%  Similarity=0.776  Sum_probs=33.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..++.+.+++.. +..||.+++.  ...|.||.+.+..
T Consensus        17 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~~--g~~G~~P~~yv~~   59 (62)
T 1uj0_A           17 VEDNELTFKHGELITVLDDS-DANWWQGENH--RGTGLFPSNFVTT   59 (62)
T ss_dssp             CSTTBCCBCTTCEEEEEECC-SSSEEEEEET--TEEEEEEGGGEES
T ss_pred             CCcCCcCCCCCCEEEEEEeC-CCCEEEEEEC--CCEEEechhHEEE
Confidence            34557888999999998864 4789999965  4589999987654

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=84.16  E-value=0.56  Score=32.49  Aligned_cols=45  Identities=22%  Similarity=0.483  Sum_probs=36.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccc-eeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLS-TFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++..  ..||+++..+ ..+.|.||.+.+...
T Consensus        71 ~~~~eLsf~~Gd~i~vl~~~--~gWw~g~~~~~~g~~G~fP~nyV~~~  116 (119)
T 2rqr_A           71 SGAPQLSLQIGDVVRIQETC--GDWYRGYLIKHKMLQGIFPKSFIHIK  116 (119)
T ss_dssp             CSTTBCCBCTTCEEEEEEEE--TTEEEEEESSCTTCEEEEEGGGBCCC
T ss_pred             CCCCcccCcCCCEEEEEEcC--CCEEEEEECCCCCCEEEeChhHEEEe
Confidence            45567888999999998875  4799999866 688999999987654

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=84.08  E-value=0.62  Score=28.71  Aligned_cols=45  Identities=27%  Similarity=0.419  Sum_probs=35.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++.. +..||.+.  ...+.|.||.+.+..+.
T Consensus        25 ~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~--~~g~~G~~P~~yv~~~~   69 (72)
T 4glm_A           25 LEPNELDFEVGDKIRILATL-EDGWLEGS--LKGRTGIFPYRFVKLCP   69 (72)
T ss_dssp             CSTTBCCBCTTCEEEEEEEC-STTEEEEE--ETTEEEEEEGGGEEEEC
T ss_pred             CCCCcCCCCCCCEEEEEEcc-CCCEEEEE--ECCcEEEEChHHeEECC
Confidence            44567888999999988765 45699998  45788999999887654

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=84.02  E-value=0.62  Score=28.96  Aligned_cols=45  Identities=22%  Similarity=0.486  Sum_probs=35.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++.. +..||.++.  +.+.|.||.+.++.+.
T Consensus        25 ~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~~--~g~~G~~P~~yv~~~~   69 (73)
T 3c0c_A           25 ENDGELGFREGDLITLTNQI-DENWYEGML--HGQSGFFPLSYVQVLV   69 (73)
T ss_dssp             SSTTBCCBCTTCEEEEEEEC-SSSEEEEEE--TTEEEEEEGGGEEEEE
T ss_pred             CCCCCccCcCCCEEEEEEec-CCCEEEEEE--CCCEEEeChHHEEECC
Confidence            44567888999999988865 467999985  6789999999877654

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=83.88  E-value=1.3  Score=28.37  Aligned_cols=46  Identities=15%  Similarity=0.432  Sum_probs=36.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++... ..||.+.  ...+.|.||.+.+..+..
T Consensus        29 ~~~~eLsf~~Gd~i~Vl~~~~-~gWw~g~--~~g~~G~~P~~yv~~~~~   74 (83)
T 1neg_A           29 KSPREVTMKKGDILTLLNSTN-KDWWKVE--VNDRQGFVPAAYVKKLAA   74 (83)
T ss_dssp             SSTTBCCBCTTCEEEEEECCS-SSEEEEE--ETTEEEEEEGGGEEECCT
T ss_pred             CCCCccccCCCCEEEEEEecC-CCEEEEE--ECCeEEEEEHHHEEECCC
Confidence            445678889999999998764 5799994  567889999999887643

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=83.82  E-value=1.5  Score=28.70  Aligned_cols=53  Identities=13%  Similarity=0.298  Sum_probs=39.9

Q ss_pred             ccCCcccccCCCeEEEecCCCC---CCcccccccceeeeecccCcccccCcCCCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPE---CHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDD  246 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  246 (251)
                      .....+.+..++.+.+++...+   ..||.+.. ...+.|.||.+.+..+.....+.
T Consensus        29 ~~~~eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~-~~~~~G~~P~~yv~~~~~~~~~~   84 (93)
T 1wxu_A           29 VSDEEISFRAGDMLNLALKEQQPKVRGWLLASL-DGQTTGLIPANYVKILGKRRGRK   84 (93)
T ss_dssp             SSSSBCCBCSSCBCEECCTTTSCSCSSCEEEES-SSSSCEEECSTTEEECCCBCCST
T ss_pred             CCCCccCcCCCCEEEEEECCCCCCCCCcEEEEe-CCcCEEEEehHHEEEcCCccccC
Confidence            3455788889999999888764   58999963 33458999999998887665543

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=83.42  E-value=0.61  Score=39.48  Aligned_cols=29  Identities=21%  Similarity=0.311  Sum_probs=23.8

Q ss_pred             cccCCCCCCCceEEE------ccCCceEEccCCCCcc
Q psy2787          38 ICSCQFSSSSLLILF------FSSSSSSSGDFGMMRY   68 (251)
Q Consensus        38 iiHrdlkp~ni~il~------~~~~~~kl~DFGla~~   68 (251)
                      ++|.|+.+.|  |++      ++...+.++||.+|..
T Consensus       246 fcHnDl~~gN--il~~~~~~~~~~~~l~vIDwEya~~  280 (401)
T 3g15_A          246 FCHNDCQEGN--ILLLEGRENSEKQKLMLIDFEYSSY  280 (401)
T ss_dssp             EECSCCCGGG--EEEETTGGGCSSCCEEECCCTTCEE
T ss_pred             eEEecCCCCe--EEEecCcccCcCCeEEEechHhccC
Confidence            6899999999  776      4456799999988754

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=83.21  E-value=0.53  Score=27.98  Aligned_cols=42  Identities=17%  Similarity=0.464  Sum_probs=33.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++... ..||.++.  +.+.|.||.+.+.
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~   59 (60)
T 2gnc_A           18 RSARELSFKKGASLLLYHRAS-EDWWEGRH--NGIDGLVPHQYIV   59 (60)
T ss_dssp             SSTTBCCBCTTCEEEEEEEEE-TTEEEEEE--TTEEEEEEGGGEE
T ss_pred             CCcCCcCCCCCCEEEEEEecC-CCEEEEEE--CCeEEEEeHhhEE
Confidence            345678889999999888754 57999997  5788999987653

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=82.88  E-value=1.3  Score=29.25  Aligned_cols=49  Identities=24%  Similarity=0.559  Sum_probs=38.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. +..||.+.  ...+.|.||.+.+..+....+
T Consensus        46 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~--~~g~~G~~P~~yv~~~~~~~~   94 (98)
T 1udl_A           46 NNEDELSFSKGQLINVMNKD-DPDWWQGE--INGVTGLFPSNYVKMTTDSSG   94 (98)
T ss_dssp             SSTTSCCCCTTCEEEECBCC-SSSEEBCB--SSSCBCCEETTSEEECCCCSS
T ss_pred             CCCCccCCcCCCEEEEEEec-CCCEEEEE--ECCcEEEEehHHeEEcCCCCC
Confidence            34567888999999998875 36799998  467889999999987766544

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=82.71  E-value=1.2  Score=32.95  Aligned_cols=45  Identities=33%  Similarity=0.665  Sum_probs=38.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++.  +..||.+.+.++.+.|.+|.+.+...
T Consensus        24 ~~~~eLs~~~Gd~i~v~~~--~~~Ww~~~~~~~g~~G~vP~~yv~~~   68 (175)
T 4d8k_A           24 SHDGDLGFEKGEQLRILEQ--SGEWWKAQSLTTGQEGFIPFNFVAKA   68 (175)
T ss_dssp             CSSSBCCBCTTCEEEEEEC--CSSEEEEEETTTCCEEEEEGGGEEET
T ss_pred             cCCcccccccCCEEEEEcc--CCCEEEEEECCCCceeeecccccccc
Confidence            4456788999999999988  45899999888889999999988764

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=82.68  E-value=1.3  Score=26.28  Aligned_cols=45  Identities=24%  Similarity=0.420  Sum_probs=34.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeee-ecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNI-GMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++... ..||.++.  .... |.||.+.+..+.
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~--~g~~gG~~P~~yv~~~~   60 (61)
T 1y0m_A           15 QREDELTFTKSAIIQNVEKQD-GGWWRGDY--GGKKQLWFPSNYVEEMI   60 (61)
T ss_dssp             CSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEEGGGEEECC
T ss_pred             CCCCCcCCcCCCEEEEEEecC-CCEEEEEE--CCeEEEEEChHHcEECC
Confidence            345678889999999988754 57999986  3344 599999887654

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=82.06  E-value=0.66  Score=27.88  Aligned_cols=45  Identities=33%  Similarity=0.664  Sum_probs=34.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++.. +..||.+.  ...+.|.||.+.+..+.
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~W~~g~--~~g~~G~~P~~yv~~~~   63 (65)
T 3u23_A           19 QNEDELELKVGDIIDINEEV-EEGWWSGT--LNNKLGLFPSNFVKELE   63 (65)
T ss_dssp             SSTTBCCBCTTCEEEEEEEE-ETTEEEEE--ETTEEEEEEGGGEEECC
T ss_pred             CCcCCcCCCCCCEEEEEEec-CCCEEEEE--ECCCEEEeehHHEEECc
Confidence            34567888999999888764 46799998  46788999999887653

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=81.77  E-value=0.53  Score=28.79  Aligned_cols=48  Identities=27%  Similarity=0.583  Sum_probs=36.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. +..||.++.  +.+.|.||.+.+..+....
T Consensus        19 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~G~~P~~yv~~~~~~~   66 (68)
T 1wi7_A           19 QNDDELELKVGDIIEVVGEV-EEGWWEGVL--NGKTGMFPSNFIKELSGPS   66 (68)
T ss_dssp             SSTTBCCBCTTCEECCCEEE-ETTEEEECS--TTCCEEEETTSEEECCSSC
T ss_pred             CCCCCccCcCCCEEEEEEcC-CCCeEEEEE--CCcEEEEchHHEEECCCCC
Confidence            34557888889988877763 467999984  6789999999988776543

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=81.60  E-value=1.3  Score=27.60  Aligned_cols=45  Identities=27%  Similarity=0.559  Sum_probs=35.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..++.+.+++... ..||.+..  ..+.|.||.+.+..+.
T Consensus        22 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~g~~--~g~~G~~P~~yv~~~~   66 (76)
T 1ujy_A           22 TNEDELSVCKGDIIYVTRVEE-GGWWEGTL--NGRTGWFPSNYVREIK   66 (76)
T ss_dssp             SSTTSCCBCSSCCEEESSCCS-SSCEEEEE--TTEEEEECTTTSEECC
T ss_pred             CCCCcccCCCCCEEEEEEecC-CCEEEEEE--CCCEEEechHHEEECC
Confidence            345678888999999887654 67999984  6788999999887764

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=81.45  E-value=1.5  Score=27.66  Aligned_cols=47  Identities=26%  Similarity=0.498  Sum_probs=36.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++.. +..||.+.  ...+.|.||.+.+..+...
T Consensus        29 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~--~~g~~G~~P~~yv~~~~~~   75 (79)
T 1x69_A           29 AGDDEISFDPDDIITNIEMI-DDGWWRGV--CKGRYGLFPANYVELRQSG   75 (79)
T ss_dssp             SSSSBCCCCTTCEEEEEEEC-SSSEEEEE--ETTEEEEEETTSEEECCCC
T ss_pred             CCCCCcCcCCCCEEEEeEec-CCCeEEEE--ECCcEEEechHHEEECCCC
Confidence            34457888899999988765 45799998  3678899999988876543

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=81.37  E-value=0.99  Score=27.80  Aligned_cols=49  Identities=24%  Similarity=0.414  Sum_probs=36.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeee-cccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIG-MFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. +..||.+..  ....| .||.+.+..+....+
T Consensus        18 ~~~~eLs~~~Gd~i~v~~~~-~~~Ww~g~~--~g~~gG~~P~~yv~~~~~~~~   67 (71)
T 1hsq_A           18 QREDELTFIKSAIIQNVEKQ-EGGWWRGDY--GGKKQLWFPSNYVEEMVNPEG   67 (71)
T ss_dssp             SSSSSCCCCTTCCCBSCCCB-TTTEECCBC--SSSCSCCEETTTCCSCSCCCC
T ss_pred             CCCCccCCCCCCEEEEEEec-CCCEEEEEE--CCeEEeEEChHHcEECCCccc
Confidence            34556788889988888774 457999986  34454 999999988766544

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=81.24  E-value=0.72  Score=39.49  Aligned_cols=29  Identities=7%  Similarity=0.098  Sum_probs=25.0

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .++|+|+.+.|  ++ +.++.+.++||..+..
T Consensus       263 ~~~H~D~~~~N--~l-~~~~~~~~IDwe~a~~  291 (424)
T 3mes_A          263 VFAHNDLQENN--LL-QTQNNIRMIDYEYSAI  291 (424)
T ss_dssp             EEECSCCCGGG--EE-ECSSCEEECCCTTCEE
T ss_pred             eEECCCCCccc--ee-cCCCcEEEEecccCCc
Confidence            58999999999  77 7778899999988753

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=81.17  E-value=0.63  Score=29.64  Aligned_cols=47  Identities=21%  Similarity=0.412  Sum_probs=36.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..|+.+.+++.. +..||.|..  ..+.|.||.+.+..+...
T Consensus        30 ~~~~eLsf~~Gd~I~Vl~~~-~~gWw~g~~--~g~~G~fP~nyV~~~~~~   76 (79)
T 1z9q_A           30 NSKLELNFKAGDVIFLLSRI-NKDWLEGTV--RGATGIFPLSFVKILKDF   76 (79)
T ss_dssp             SSTTBCCCCTTCCBCCCEES-SSSEEEEEE--TTEEEEEEGGGEEESSCC
T ss_pred             CCCCcccccCCCEEEEeEec-CCCEEEEEE--CCeEEEecHHHEEECCCC
Confidence            34556788889988887764 467999994  578899999988877543

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=80.95  E-value=1.2  Score=32.93  Aligned_cols=43  Identities=23%  Similarity=0.613  Sum_probs=34.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..|+.+.+++.. +..||.+.+ ...+.|.||.+.+.
T Consensus       130 ~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~-~~g~~G~~P~nyv~  172 (174)
T 3qwx_X          130 ERETDLPFEQGERLEILSKT-NQDWWEARN-ALGTTGLVPANYVQ  172 (174)
T ss_dssp             SSTTBCCBCTTCEEEEEECC-SSSEEEEEC-TTCCEEEEEGGGEE
T ss_pred             CCCCccccccCCEEEEEEcc-CCCeEEEEE-CCCCEEEEChHHEE
Confidence            45567888999999998877 578999997 57788999988654

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=80.61  E-value=0.94  Score=31.36  Aligned_cols=51  Identities=14%  Similarity=0.337  Sum_probs=39.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccc-cceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQN-LSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++.. +..||.+.+ .+..+.|.||.+.+..+...+.
T Consensus        15 ~~~~ELsf~~Gd~i~vl~~~-~~~Ww~g~~~~~~g~~G~~P~nyv~~~~~~~~   66 (120)
T 2kym_A           15 ERDDELDVSPGENLSICAHY-DYEWFIAKPINRLGGPGLVPVSYVRIIDLMDP   66 (120)
T ss_dssp             CSTTCCCBCTTCEEEEEEEE-TTTEEEEEESSSCSCCCCEEGGGEEEECSSCT
T ss_pred             CCCCccCCCCCCEEEEEEec-CCCEEEEEECCCCCCEEEEchHHEEEccCCCC
Confidence            44567888999999988874 467999986 4677889999998876654433

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	251
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-33
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	6e-28
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	8e-28
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-27
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-27
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-26
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-26
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-26
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	7e-26
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-26
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	1e-25
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-25
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-25
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	6e-25
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-24
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-23
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-23
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	5e-23
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	2e-22
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-22
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-21
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-21
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	3e-20
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	5e-20
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	6e-20
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-18
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-18
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-17
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-17
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	8e-17
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-16
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-16
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	6e-16
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-16
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-16
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	2e-15
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-15
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-14
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-14
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	2e-13
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	4e-13
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	9e-13
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	2e-12
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	7e-11
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	9e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-10
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	2e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	3e-10
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	3e-09
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-08
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	1e-08
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-08
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-06
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	7e-06
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	7e-06
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	7e-06
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	1e-05
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	2e-05
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	9e-05
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	1e-04
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	1e-04
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	1e-04
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	1e-04
d1spka_	72	b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RI	1e-04
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-04
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	2e-04
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-04
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	3e-04
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	3e-04
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-04
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	4e-04
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	5e-04
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	6e-04
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	6e-04
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	8e-04
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	0.002
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	0.002
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	0.002
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	0.002
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	0.003
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	0.004

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (299), Expect = 3e-33
 Identities = 72/142 (50%), Positives = 91/142 (64%), Gaps = 4/142 (2%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR--YSQNDCYVMTERKPLPCPWCPMESLK 93
                   ++ +  +L  +      GDFG+MR     +D YVM E + +P  WC  ESLK
Sbjct: 130 KRFIHRDLAARN--LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187

Query: 94  HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL 153
              FS ASD WMFGVT+WEMFT+G EPW+GLNG QIL KID+EGERLPRPE CP ++Y +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNV 247

Query: 154 MRQCWSKNPAERPKFSTLKDCL 175
           M QCW+  P +RP F  L+D L
Sbjct: 248 MVQCWAHKPEDRPTFVALRDFL 269

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 6e-28
 Identities = 41/144 (28%), Positives = 61/144 (42%), Gaps = 3/144 (2%)

Query: 28  RGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWC 87
                           ++ +   L          DFG+ RY  +D Y  +     P  W 
Sbjct: 111 EAMEYLESKQFLHRDLAARN--CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 168

Query: 88  PMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACP 147
           P E L +++FS  SD W FGV +WE+++ G  P+      +  + I + G RL RP    
Sbjct: 169 PPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ-GLRLYRPHLAS 227

Query: 148 VEVYALMRQCWSKNPAERPKFSTL 171
            +VY +M  CW +   ERP F  L
Sbjct: 228 EKVYTIMYSCWHEKADERPTFKIL 251

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 8e-28
 Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 1/129 (0%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L  S+     GDFG+ RY ++  Y    +  LP  W   ES+   +F+ ASD WMFGV 
Sbjct: 139 VLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 198

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
           +WE+   G +P+ G+    ++ +I   GERLP P  CP  +Y+LM +CW+ +P+ RP+F+
Sbjct: 199 MWEILMHGVKPFQGVKNNDVIGRI-ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFT 257

Query: 170 TLKDCLYRL 178
            LK  L  +
Sbjct: 258 ELKAQLSTI 266

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (256), Expect = 7e-27
 Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 5/142 (3%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPL--PCPWCPMESLK 93
           +N      ++ +  +L  +   +   DFG+ +  + D      +     P  W   E + 
Sbjct: 126 SNFVHRDLAARN--VLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 183

Query: 94  HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL 153
           + +FS  SD W FGV +WE F++G +P+ G+ G ++   +  +GER+  P  CP E+Y L
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-EKGERMGCPAGCPREMYDL 242

Query: 154 MRQCWSKNPAERPKFSTLKDCL 175
           M  CW+ +   RP F+ ++  L
Sbjct: 243 MNLCWTYDVENRPGFAAVELRL 264

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  103 bits (257), Expect = 8e-27
 Identities = 46/119 (38%), Positives = 72/119 (60%), Gaps = 2/119 (1%)

Query: 61  GDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAE 119
            DFG+ R     D Y       +P  W P ES+ +N+++  SD W +GV +WE+F++G +
Sbjct: 182 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQ 241

Query: 120 PWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           P+ G+   +++  + R+G  L  PE CP+E+Y LMR CWSK PA+RP F ++   L R+
Sbjct: 242 PYYGMAHEEVIYYV-RDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 299

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 2e-26
 Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 3/151 (1%)

Query: 28  RGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWC 87
            G        +     ++ +   L   +      DFGM R+  +D Y  +     P  W 
Sbjct: 112 EGMAYLEEACVIHRDLAARN--CLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWA 169

Query: 88  PMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACP 147
             E    +++S  SD W FGV +WE+F+ G  P+   +  ++++ I   G RL +P    
Sbjct: 170 SPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI-STGFRLYKPRLAS 228

Query: 148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
             VY +M  CW + P +RP FS L   L  +
Sbjct: 229 THVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (251), Expect = 3e-26
 Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 3/140 (2%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
            N       +++  IL   + S    DFG+ R  +++ Y   E    P  W   E++ + 
Sbjct: 128 RNYIHRDLRAAN--ILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG 185

Query: 96  QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMR 155
            F+  SD W FG+ + E+ T G  P+ G+   +++Q ++R G R+ RP+ CP E+Y LMR
Sbjct: 186 TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER-GYRMVRPDNCPEELYQLMR 244

Query: 156 QCWSKNPAERPKFSTLKDCL 175
            CW + P +RP F  L+  L
Sbjct: 245 LCWKERPEDRPTFDYLRSVL 264

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (250), Expect = 4e-26
 Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 7/143 (4%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
           NN      ++ +  +L    + +   DFG+ + + +          LP  W   E+L+  
Sbjct: 122 NNFVHRDLAARN--VLVSEDNVAKVSDFGLTKEASSTQDTG----KLPVKWTAPEALREK 175

Query: 96  QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMR 155
           +FS  SD W FG+ +WE+++FG  P+  +    ++ ++  +G ++  P+ CP  VY +M+
Sbjct: 176 KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVYEVMK 234

Query: 156 QCWSKNPAERPKFSTLKDCLYRL 178
            CW  + A RP F  L++ L  +
Sbjct: 235 NCWHLDAAMRPSFLQLREQLEHI 257

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 7e-26
 Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 1/127 (0%)

Query: 50  ILFFSSSSSSSGDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGV 108
           +L          DFG+ R    +  YV+     LP  W   ESL    ++  SD W +G+
Sbjct: 195 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGI 254

Query: 109 TIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
            +WE+F+ G  P+ G+       K+ + G ++ +P     E+Y +M+ CW+ +  +RP F
Sbjct: 255 LLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF 314

Query: 169 STLKDCL 175
             L   L
Sbjct: 315 PNLTSFL 321

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 9e-26
 Identities = 41/142 (28%), Positives = 69/142 (48%), Gaps = 5/142 (3%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERK--PLPCPWCPMESLK 93
            N      ++ +  +L  +   +   DFG+ +    D    T R     P  W   E + 
Sbjct: 128 KNFVHRDLAARN--VLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECIN 185

Query: 94  HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL 153
             +FS  SD W +GVT+WE  ++G +P+  + G +++  I  +G+R+  P  CP E+YAL
Sbjct: 186 FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRMECPPECPPELYAL 244

Query: 154 MRQCWSKNPAERPKFSTLKDCL 175
           M  CW     +RP F T++  +
Sbjct: 245 MSDCWIYKWEDRPDFLTVEQRM 266

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 1e-25
 Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%)

Query: 62  DFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           DFG+ +     +     E   +P  W  +ES+ H  ++  SD W +GVT+WE+ TFG++P
Sbjct: 154 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + G+   +I   +++ GERLP+P  C ++VY +M +CW  +   RPKF  L     ++
Sbjct: 214 YDGIPASEISSILEK-GERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 270

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 1e-25
 Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 6/154 (3%)

Query: 28  RGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY---SQNDCYVMTERKPLPC 84
           +G    +         ++ +   +     +    DFG+ R     + D         LP 
Sbjct: 141 KGMKFLASKKFVHRDLAARN--CMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPV 198

Query: 85  PWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE 144
            W  +ESL+  +F+  SD W FGV +WE+ T GA P+  +N   I   +  +G RL +PE
Sbjct: 199 KWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPE 257

Query: 145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            CP  +Y +M +CW      RP FS L   +  +
Sbjct: 258 YCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 98.7 bits (245), Expect = 4e-25
 Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 9/164 (5%)

Query: 28  RGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERK----PLP 83
            G    +  N      ++ +  IL  S+      DFG+ R+ ++D    T        +P
Sbjct: 139 AGMKYLADMNYVHRDLAARN--ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 196

Query: 84  CPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP 143
             W   E++++ +F+ ASD W +G+ +WE+ ++G  P+  +    ++  I+ +  RLP P
Sbjct: 197 IRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLPPP 255

Query: 144 EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL--TPAVMKA 185
             CP  ++ LM  CW K+   RPKF  + + L ++   P  +KA
Sbjct: 256 MDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNSLKA 299

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.9 bits (243), Expect = 6e-25
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
            DFG+ R  +++ Y   +    P  W   E+  + +F+  SD W FG+ + E+ T G  P
Sbjct: 155 ADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 214

Query: 121 WVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           + G+   ++L +++R G R+P P  CP  ++ LM QCW K P ERP F  L+  L
Sbjct: 215 YPGMVNREVLDQVER-GYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 268

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 95.9 bits (238), Expect = 3e-24
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 3/151 (1%)

Query: 28  RGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWC 87
                    N      ++ +   L   +      DFG+ R    D Y        P  W 
Sbjct: 126 SAMEYLEKKNFIHRDLAARN--CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183

Query: 88  PMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACP 147
             ESL +N+FS  SD W FGV +WE+ T+G  P+ G++  Q+ + +++   R+ RPE CP
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK-DYRMERPEGCP 242

Query: 148 VEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
            +VY LMR CW  NP++RP F+ +      +
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAEIHQAFETM 273

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 1e-23
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 1/110 (0%)

Query: 69  SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ 128
              D Y  T    LP  W   E+L    ++  SD W FGV +WE+FT G  P+ G+   +
Sbjct: 186 HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 245

Query: 129 ILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           + + + +EG R+ +P  C  E+Y +MR CW   P++RP F  L + L R+
Sbjct: 246 LFKLL-KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.5 bits (234), Expect = 2e-23
 Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 5/143 (3%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
                   ++ +  IL   +  +   DFG+ R    + YV      LP  W  +ESL ++
Sbjct: 146 KQFIHRDLAARN--ILVGENYVAKIADFGLSR--GQEVYVKKTMGRLPVRWMAIESLNYS 201

Query: 96  QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMR 155
            ++  SD W +GV +WE+ + G  P+ G+   ++ +K+  +G RL +P  C  EVY LMR
Sbjct: 202 VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-PQGYRLEKPLNCDDEVYDLMR 260

Query: 156 QCWSKNPAERPKFSTLKDCLYRL 178
           QCW + P ERP F+ +   L R+
Sbjct: 261 QCWREKPYERPSFAQILVSLNRM 283

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 5e-23
 Identities = 48/153 (31%), Positives = 79/153 (51%), Gaps = 5/153 (3%)

Query: 28  RGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND--CYVMTERKPLPCP 85
            G    +  N      ++ +  IL  S+      DFG+ R  ++D      T    +P  
Sbjct: 121 AGMKYLANMNYVHRDLAARN--ILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 178

Query: 86  WCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEA 145
           W   E++ + +F+ ASD W FG+ +WE+ T+G  P+  L+  ++++ I+ +G RLP P  
Sbjct: 179 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTPMD 237

Query: 146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL 178
           CP  +Y LM QCW +  A RPKF+ +   L +L
Sbjct: 238 CPSAIYQLMMQCWQQERARRPKFADIVSILDKL 270

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 91.2 bits (226), Expect = 2e-22
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 3/124 (2%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +      +   GDFG+ R   +D          P    P E +    +++ SD W  G  
Sbjct: 145 VFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSP-EQMNRMSYNEKSDIWSLGCL 203

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
           ++E+      P+   +  ++  KI REG+    P     E+  ++ +  +     RP   
Sbjct: 204 LYELCA-LMPPFTAFSQKELAGKI-REGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVE 261

Query: 170 TLKD 173
            + +
Sbjct: 262 EILE 265

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.0 bits (223), Expect = 4e-22
 Identities = 34/143 (23%), Positives = 56/143 (39%), Gaps = 9/143 (6%)

Query: 50  ILFFSSSSSSSGDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKH---NQFSQASDAWM 105
           I      +   GDFG+    S+       E+      W   E ++    N +S  SD + 
Sbjct: 135 IFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYA 194

Query: 106 FGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR----PEACPVEVYALMRQCWSKN 161
           FG+ ++E+ T G  P+  +N    +  +   G   P        CP  +  LM +C  K 
Sbjct: 195 FGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKK 253

Query: 162 PAERPKFSTLKDCLYRLTPAVMK 184
             ERP F  +   +  L  ++ K
Sbjct: 254 RDERPLFPQILASIELLARSLPK 276

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 2e-21
 Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 1/127 (0%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGV 108
           IL      +   DFG+ R  +ND  YV+     LP  W   ES+ +  ++  SD W +G+
Sbjct: 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGI 235

Query: 109 TIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
            +WE+F+ G+ P+ G+       K+ +EG R+  PE  P E+Y +M+ CW  +P +RP F
Sbjct: 236 FLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTF 295

Query: 169 STLKDCL 175
             +   +
Sbjct: 296 KQIVQLI 302

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 4e-21
 Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 3/144 (2%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRY-SQNDCYVMTERKPLPCPWCPMESLKH 94
                   ++ +  IL    +     DFG+ R   ++  YV      LP  W   E++  
Sbjct: 153 RKCIHRDLAARN--ILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD 210

Query: 95  NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALM 154
             ++  SD W FGV +WE+F+ GA P+ G+   +   +  +EG R+  P+    E+Y  M
Sbjct: 211 RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTM 270

Query: 155 RQCWSKNPAERPKFSTLKDCLYRL 178
             CW   P++RP FS L + L  L
Sbjct: 271 LDCWHGEPSQRPTFSELVEHLGNL 294

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.3 bits (210), Expect = 3e-20
 Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 1/111 (0%)

Query: 65  MMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGL 124
                + D Y    +  LP  W   ESLK   F+  SD W FGV +WE+ T   +P+ GL
Sbjct: 180 TRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL 239

Query: 125 NGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           +  Q+L+ +  EG  L +P+ CP  ++ LMR CW  NP  RP F  +   +
Sbjct: 240 SNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 289

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.7 bits (209), Expect = 5e-20
 Identities = 28/138 (20%), Positives = 43/138 (31%), Gaps = 5/138 (3%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
           N +      S +  IL     S    DFG       +    +     P  W   E +   
Sbjct: 135 NQVIHRDIKSDN--ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTP-YWMAPEVVTRK 191

Query: 96  QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-RLPRPEACPVEVYALM 154
            +    D W  G+   EM   G  P++  N ++ L  I   G   L  PE         +
Sbjct: 192 AYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFL 250

Query: 155 RQCWSKNPAERPKFSTLK 172
            +C   +  +R     L 
Sbjct: 251 NRCLDMDVEKRGSAKELL 268

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.3 bits (208), Expect = 6e-20
 Identities = 32/129 (24%), Positives = 46/129 (35%), Gaps = 6/129 (4%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCP----MESLKHNQFSQASDAWM 105
           ILF         DFG+   +             P    P     E+ K   +   +D W 
Sbjct: 141 ILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWS 200

Query: 106 FGVTIWEMFTFGAEPWVGLNGMQILQKIDR-EGERLPRPEACPVEVYALMRQCWSKNPAE 164
            G+T+ EM      P   LN M++L KI + E   L +P          +++C  KN   
Sbjct: 201 LGITLIEMAE-IEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDA 259

Query: 165 RPKFSTLKD 173
           R   S L  
Sbjct: 260 RWTTSQLLQ 268

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (197), Expect = 2e-18
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 6/124 (4%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L  S+      DFG   ++ +              + P E ++     +  D W  GV 
Sbjct: 137 LLLGSAGELKIADFGWSVHAPSSRRTTLCGTL---DYLPPEMIEGRMHDEKVDLWSLGVL 193

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFS 169
            +E    G  P+      +  ++I R       P+        L+ +    NP++RP   
Sbjct: 194 CYEFLV-GKPPFEANTYQETYKRISRV--EFTFPDFVTEGARDLISRLLKHNPSQRPMLR 250

Query: 170 TLKD 173
            + +
Sbjct: 251 EVLE 254

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.3 bits (195), Expect = 5e-18
 Identities = 27/138 (19%), Positives = 45/138 (32%), Gaps = 7/138 (5%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKH 94
           +N+      + +  IL         GDFG     +  + +V T   P       + ++  
Sbjct: 134 HNMIHRDVKAGN--ILLSEPGLVKLGDFGSASIMAPANSFVGT---PYWMAPEVILAMDE 188

Query: 95  NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALM 154
            Q+    D W  G+T  E+      P   +N M  L  I +      +           +
Sbjct: 189 GQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFV 247

Query: 155 RQCWSKNPAERPKFSTLK 172
             C  K P +RP    L 
Sbjct: 248 DSCLQKIPQDRPTSEVLL 265

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 77.9 bits (191), Expect = 2e-17
 Identities = 25/129 (19%), Positives = 43/129 (33%), Gaps = 13/129 (10%)

Query: 62  DFGMMRY------SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT 115
           DFGM+++       Q+  Y   +       +  + +    + S+  D    G        
Sbjct: 149 DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR 208

Query: 116 FGAEPWVGLNGMQILQKIDREGERLPRP------EACPVEVYALMRQCWSKNPAERPKFS 169
            G+ PW GL      QK +R GE+             P E Y  M    +      P + 
Sbjct: 209 -GSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYD 267

Query: 170 TLKDCLYRL 178
            L+    ++
Sbjct: 268 YLQGLFSKV 276

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 2e-17
 Identities = 23/142 (16%), Positives = 47/142 (33%), Gaps = 8/142 (5%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
           +NI        +++     SS+    +FG  R  +                  +   +H+
Sbjct: 121 HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV--HQHD 178

Query: 96  QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPVEVYAL 153
             S A+D W  G  ++ + + G  P++     QI++ I            +   +E    
Sbjct: 179 VVSTATDMWSLGTLVYVLLS-GINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237

Query: 154 MRQCWSKNPAERPKFSTLKDCL 175
           + +   K    R    T  + L
Sbjct: 238 VDRLLVKERKSRM---TASEAL 256

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 75.6 bits (185), Expect = 8e-17
 Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 13/126 (10%)

Query: 62  DFGMMRY------SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFT 115
           DFG+ +        Q+  Y   +       +  + +    + S+  D    G  +     
Sbjct: 149 DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNL 208

Query: 116 FGAEPWVGLNGMQILQKIDREGERLPR------PEACPVEVYALMRQCWSKNPAERPKFS 169
            G+ PW GL      QK +R  E+          +  P E    +  C S    ++P +S
Sbjct: 209 -GSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYS 267

Query: 170 TLKDCL 175
            L+   
Sbjct: 268 YLRQLF 273

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 75.5 bits (185), Expect = 2e-16
 Identities = 26/142 (18%), Positives = 49/142 (34%), Gaps = 8/142 (5%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
           ++I        +++     +SS    DFG+      D  V          +   E +   
Sbjct: 146 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAE--FAAPEIVDRE 203

Query: 96  QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPVEVYAL 153
                +D W  GV  + + + G  P+ G + ++ LQ + R           +   E    
Sbjct: 204 PVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF 262

Query: 154 MRQCWSKNPAERPKFSTLKDCL 175
           ++    K P +R    T+ D L
Sbjct: 263 IKNLLQKEPRKRL---TVHDAL 281

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.8 bits (183), Expect = 3e-16
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 4/117 (3%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           IL          DFGM + +                +   E L   +++ + D W FGV 
Sbjct: 134 ILLDKDGHIKIADFGMCKENMLGDAKTNTFCG-TPDYIAPEILLGQKYNHSVDWWSFGVL 192

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP 166
           ++EM   G  P+ G +  ++   I    +    P     E   L+ + + + P +R 
Sbjct: 193 LYEMLI-GQSPFHGQDEEELFHSIRM--DNPFYPRWLEKEAKDLLVKLFVREPEKRL 246

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 74.0 bits (181), Expect = 6e-16
 Identities = 20/139 (14%), Positives = 41/139 (29%), Gaps = 5/139 (3%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
           NN         +++     S+     DFG+  +      V          +   E  +  
Sbjct: 143 NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAE--FAAPEVAEGK 200

Query: 96  QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPVEVYAL 153
                +D W  GV  + + + G  P+ G N  + L+ +      +          +    
Sbjct: 201 PVGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDF 259

Query: 154 MRQCWSKNPAERPKFSTLK 172
           +R+    +P  R       
Sbjct: 260 IRKLLLADPNTRMTIHQAL 278

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 73.2 bits (179), Expect = 6e-16
 Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 7/129 (5%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQND----CYVMTERKPLPCPWCPMESLKHNQFSQASDAWM 105
           IL     +    DFG                T     P       +  H  + +  D W 
Sbjct: 141 ILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 200

Query: 106 FGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEA--CPVEVYALMRQCWSKNPA 163
            GV ++ +   G+ P+     M +L+ I     +   PE       V  L+ +     P 
Sbjct: 201 TGVIMYTLLA-GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQ 259

Query: 164 ERPKFSTLK 172
           +R       
Sbjct: 260 KRYTAEEAL 268

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 72.5 bits (177), Expect = 9e-16
 Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 3/133 (2%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
           N I       ++++I   ++                +    T        +   E  + +
Sbjct: 130 NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 189

Query: 96  QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACPVEVYAL 153
                SD +  G  ++E+ T G  P+ G + + +  +  RE    P  R E    ++ A+
Sbjct: 190 SVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAV 248

Query: 154 MRQCWSKNPAERP 166
           + +  +KNP  R 
Sbjct: 249 VLKALAKNPENRY 261

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 2e-15
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 6/114 (5%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEP 120
           GD G+    +          P    +   E  +  ++ ++ D + FG+ + EM T    P
Sbjct: 157 GDLGLATLKRASFAKAVIGTP---EFMAPEMYE-EKYDESVDVYAFGMCMLEMAT-SEYP 211

Query: 121 WVGL-NGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKD 173
           +    N  QI +++    +     +    EV  ++  C  +N  ER     L +
Sbjct: 212 YSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.0 bits (176), Expect = 2e-15
 Identities = 23/130 (17%), Positives = 41/130 (31%), Gaps = 4/130 (3%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCP-WCPMESLKHNQFSQASDAWMFGV 108
           IL          DFG  +    +         +    +   E L      ++SD W  G 
Sbjct: 139 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 198

Query: 109 TIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKF 168
            I+++   G  P+   N   I QKI +       PE    +   L+ +    +  +R   
Sbjct: 199 IIYQLVA-GLPPFRAGNEYLIFQKIIKL--EYDFPEKFFPKARDLVEKLLVLDATKRLGC 255

Query: 169 STLKDCLYRL 178
             ++      
Sbjct: 256 EEMEGYGPLK 265

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.7 bits (175), Expect = 3e-15
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 9/128 (7%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           IL   +      DFG  +Y  +  Y +         +   E +    ++++ D W FG+ 
Sbjct: 135 ILLDKNGHIKITDFGFAKYVPDVTYTLCG----TPDYIAPEVVSTKPYNKSIDWWSFGIL 190

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP--K 167
           I+EM   G  P+   N M+  +KI      L  P     +V  L+ +  +++ ++R    
Sbjct: 191 IYEMLA-GYTPFYDSNTMKTYEKILNA--ELRFPPFFNEDVKDLLSRLITRDLSQRLGNL 247

Query: 168 FSTLKDCL 175
            +  +D  
Sbjct: 248 QNGTEDVK 255

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 1e-14
 Identities = 22/161 (13%), Positives = 45/161 (27%), Gaps = 7/161 (4%)

Query: 17  EPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSS--GDFGMMRYSQNDCY 74
           E   + L     G        I        ++++L  +         DFG+         
Sbjct: 113 EEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN- 171

Query: 75  VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKID 134
              +       +   E + +      +D W  GV  + + + GA P++G    + L  + 
Sbjct: 172 -EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANVS 229

Query: 135 REGERLPR--PEACPVEVYALMRQCWSKNPAERPKFSTLKD 173
                                +R+   K+P +R        
Sbjct: 230 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 270

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.7 bits (167), Expect = 3e-14
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 6/128 (4%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           ++          DFG+ +   +D   M      P  +   E L+ N + +A D W  GV 
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP-EYLAPEVLEDNDYGRAVDWWGLGVV 194

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERP--K 167
           ++EM   G  P+   +  ++ + I  E   +  P     E  +L+     K+P +R    
Sbjct: 195 MYEMMC-GRLPFYNQDHERLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGG 251

Query: 168 FSTLKDCL 175
            S  K+ +
Sbjct: 252 PSDAKEVM 259

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 5e-14
 Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 10/145 (6%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSS-SGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKH 94
            NI        +LL      ++     DFG  + + +   + T        +   E L  
Sbjct: 130 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT--PYYVAPEVLGP 187

Query: 95  NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ----ILQKIDREGERLPRPEA--CPV 148
            ++ ++ D W  GV ++ +   G  P+   +G+     +  +I       P PE      
Sbjct: 188 EKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSE 246

Query: 149 EVYALMRQCWSKNPAERPKFSTLKD 173
           EV  L+R      P +R   +   +
Sbjct: 247 EVKMLIRNLLKTEPTQRMTITEFMN 271

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.8 bits (165), Expect = 7e-14
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 5/127 (3%)

Query: 48  LLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFG 107
           L       S     DFG+ +       + T        +   E L    +S+A D W  G
Sbjct: 139 LYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG--YVAPEVLAQKPYSKAVDCWSIG 196

Query: 108 VTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRP--EACPVEVYALMRQCWSKNPAER 165
           V  + +   G  P+   N  ++ ++I +       P  +         +R    K+P +R
Sbjct: 197 VIAYILLC-GYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR 255

Query: 166 PKFSTLK 172
                  
Sbjct: 256 FTCEQAL 262

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.8 bits (160), Expect = 2e-13
 Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 2/114 (1%)

Query: 61  GDFGMMR-YSQNDCYVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGA 118
            DFG+   +  N+   +  +     P+   E LK  +F ++  D W  G+ +  M     
Sbjct: 145 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 204

Query: 119 EPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLK 172
                 +  Q       +   L   +       AL+ +   +NP+ R     +K
Sbjct: 205 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIK 258

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.6 bits (159), Expect = 4e-13
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 5/110 (4%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQ--FSQASDAWMFGVTIWEMFTFGA 118
            DFG+ +    D             +   + ++       +A D W  GV ++E+ T GA
Sbjct: 171 TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GA 229

Query: 119 EPWVGLNGMQILQKIDRE--GERLPRPEACPVEVYALMRQCWSKNPAERP 166
            P+          +I R       P P+        L+++   K+P +R 
Sbjct: 230 SPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRL 279

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 9e-13
 Identities = 22/146 (15%), Positives = 44/146 (30%), Gaps = 28/146 (19%)

Query: 61  GDFGMMRYSQNDCYVMTERKPLPCP---WCPMESL------KHNQFSQASDAWMFGVTIW 111
            D G+     +    +            +   E L      KH +  + +D +  G+  W
Sbjct: 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209

Query: 112 EMFT--------------FGAEPWVGLNGMQILQKIDREGERLPRPE-----ACPVEVYA 152
           E+                +        +  ++ + +  +  R   P           +  
Sbjct: 210 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 269

Query: 153 LMRQCWSKNPAERPKFSTLKDCLYRL 178
           +MR+CW  N A R     +K  L +L
Sbjct: 270 IMRECWYANGAARLTALRIKKTLSQL 295

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 64.0 bits (155), Expect = 2e-12
 Identities = 14/119 (11%), Positives = 36/119 (30%), Gaps = 6/119 (5%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGV 108
           IL          D G+           +        +   E L+    +  ++D +  G 
Sbjct: 138 ILLDEHGHVRISDLGLACDFSKKKPHASVGTH---GYMAPEVLQKGVAYDSSADWFSLGC 194

Query: 109 TIWEMFTFGAEPWVGLNGMQILQKIDRE-GERLPRPEACPVEVYALMRQCWSKNPAERP 166
            ++++   G  P+         +         +  P++   E+ +L+     ++   R 
Sbjct: 195 MLFKLLR-GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 252

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 7e-11
 Identities = 26/153 (16%), Positives = 41/153 (26%), Gaps = 31/153 (20%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L  +  +    DFG+ R         T          P   L    +S A D W  G  
Sbjct: 133 LLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCI 192

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--------------------------- 142
             EM T     + G + +  L +I R                                  
Sbjct: 193 FAEMVT-RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKV 251

Query: 143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
                 +  +L+ Q    +P +R    + K  L
Sbjct: 252 VPPLDEDGRSLLSQMLHYDPNKRI---SAKAAL 281

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.2 bits (140), Expect = 9e-11
 Identities = 22/139 (15%), Positives = 57/139 (41%), Gaps = 14/139 (10%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
             +        ++LI   +       DFG     ++  Y   +       + P E ++++
Sbjct: 129 CGVLHRDIKDENILIDL-NRGELKLIDFGSGALLKDTVYTDFDGTR---VYSPPEWIRYH 184

Query: 96  QF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALM 154
           ++  +++  W  G+ +++M   G  P+      +I++       ++   +    E   L+
Sbjct: 185 RYHGRSAAVWSLGILLYDMVC-GDIPFEHDE--EIIRG------QVFFRQRVSSECQHLI 235

Query: 155 RQCWSKNPAERPKFSTLKD 173
           R C +  P++RP F  +++
Sbjct: 236 RWCLALRPSDRPTFEEIQN 254

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.7 bits (141), Expect = 1e-10
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 9/128 (7%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L          DFG  +  +   + +             E +    +++A D W  GV 
Sbjct: 172 LLIDQQGYIQVTDFGFAKRVKGRTWTLCG----TPEALAPEIILSKGYNKAVDWWALGVL 227

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPK-- 167
           I+EM   G  P+     +QI +KI     ++  P     ++  L+R     +  +R    
Sbjct: 228 IYEMAA-GYPPFFADQPIQIYEKIVSG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNL 284

Query: 168 FSTLKDCL 175
            + + D  
Sbjct: 285 KNGVNDIK 292

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (138), Expect = 2e-10
 Identities = 20/152 (13%), Positives = 38/152 (25%), Gaps = 30/152 (19%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L   +      DFG+ +   +     T +        P        +    D W  G  
Sbjct: 131 LLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCI 190

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE------------------------- 144
           + E+         G + +  L +I          +                         
Sbjct: 191 LAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIF 249

Query: 145 -ACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
            A   ++  L++  +  NP  R    T    L
Sbjct: 250 SAAGDDLLDLIQGLFLFNPCARI---TATQAL 278

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 57.2 bits (137), Expect = 3e-10
 Identities = 24/153 (15%), Positives = 37/153 (24%), Gaps = 31/153 (20%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L          DFG+ R         T          P   +   ++S   D W  G  
Sbjct: 131 LLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCI 190

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE------------------------- 144
             EM   G   + G++    L +I R                                  
Sbjct: 191 FAEMVN-GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESF 249

Query: 145 --ACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
                     L+ +    +P +R    T K  L
Sbjct: 250 LKGLDESGIDLLSKMLKLDPNQRI---TAKQAL 279

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.9 bits (136), Expect = 3e-10
 Identities = 20/153 (13%), Positives = 39/153 (25%), Gaps = 30/153 (19%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +L   +      +FG+ R         +          P        +S + D W  G  
Sbjct: 132 LLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE------------------------- 144
             E+   G   + G +    L++I R        +                         
Sbjct: 192 FAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNV 251

Query: 145 --ACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
                     L++     NP +R    + ++ L
Sbjct: 252 VPKLNATGRDLLQNLLKCNPVQRI---SAEEAL 281

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.9 bits (129), Expect = 3e-09
 Identities = 31/168 (18%), Positives = 46/168 (27%), Gaps = 49/168 (29%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           IL  S       DFG+     +    M         +   E L+   +S  SD W  G++
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 192

Query: 110 IWEMFTFGAEPWVGLNG------------------------------------------M 127
           + EM   G  P    +                                            
Sbjct: 193 LVEMAV-GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIF 251

Query: 128 QILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
           ++L  I  E           +E    + +C  KNPAER     LK  +
Sbjct: 252 ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERA---DLKQLM 296

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.6 bits (125), Expect = 1e-08
 Identities = 32/152 (21%), Positives = 48/152 (31%), Gaps = 33/152 (21%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           IL  SS      DFG+ R       + +    L   +   E L  + ++   D W  G  
Sbjct: 147 ILVTSSGQIKLADFGLARIYSFQMALTSVVVTLW--YRAPEVLLQSSYATPVDLWSVGCI 204

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPV--------------------- 148
             EMF      + G + +  L KI  +   LP  E  P                      
Sbjct: 205 FAEMFR-RKPLFRGSSDVDQLGKI-LDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV 262

Query: 149 -----EVYALMRQCWSKNPAERPKFSTLKDCL 175
                    L+ +C + NPA+R    +    L
Sbjct: 263 TDIDELGKDLLLKCLTFNPAKRI---SAYSAL 291

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.3 bits (115), Expect = 1e-08
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 10/77 (12%)

Query: 163 AERPKFSTLKDCLYRLTPAVMKATQNCHEIDEEGKLYIDAGDQIVIIEGDPECHWWKGQN 222
           +  PK    ++  Y   P                 L ++ GD + + + + E +WW+G+N
Sbjct: 2   SHMPKMEVFQE--YYGIPP--------PPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRN 51

Query: 223 LSTFNIGMFPRNIMDPM 239
            +T  +G FP N + P 
Sbjct: 52  TATNEVGWFPCNRVHPY 68

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.5 bits (125), Expect = 1e-08
 Identities = 22/141 (15%), Positives = 40/141 (28%), Gaps = 32/141 (22%)

Query: 62  DFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPW 121
           DFG  +        ++          P        ++ + D W  G  + E+   G   +
Sbjct: 166 DFGSAKQLVRGEPNVS-YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIF 223

Query: 122 VGLNGMQILQKI-----------------DREGERLPRPEACPV----------EVYALM 154
            G +G+  L +I                 +    + P+ +A P           E  AL 
Sbjct: 224 PGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALC 283

Query: 155 RQCWSKNPAERPKFSTLKDCL 175
            +     P  R    T  +  
Sbjct: 284 SRLLEYTPTARL---TPLEAC 301

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (109), Expect = 1e-06
 Identities = 26/160 (16%), Positives = 40/160 (25%), Gaps = 38/160 (23%)

Query: 50  ILFFSSSSSSSGDFGMMRY----SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWM 105
           +L          DFG+ R       +     T R        P   L    +    D W 
Sbjct: 148 VLITRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWG 207

Query: 106 FGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA------------- 152
            G  + EM+T  +    G      L  I +    +       V+ Y              
Sbjct: 208 AGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKR 266

Query: 153 -----------------LMRQCWSKNPAERPKFSTLKDCL 175
                            L+ +    +PA+R       D L
Sbjct: 267 KVKDRLKAYVRDPYALDLIDKLLVLDPAQRI---DSDDAL 303

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 7e-06
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 239
             E  L    G++  I+       WW+ ++L+T   G  P N + P+
Sbjct: 12  ITEDDLSFHKGEKFQILNSSEG-DWWEARSLTTGETGYIPSNYVAPV 57

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 7e-06
 Identities = 24/155 (15%), Positives = 44/155 (28%), Gaps = 36/155 (23%)

Query: 50  ILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVT 109
           +           DFG+ R + ++   MT          P   L   +++Q  D W  G  
Sbjct: 152 LAVNEDCELKILDFGLARQADSE---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI 208

Query: 110 IWEMFTFGAEPWVGLNGMQILQKIDREGERLP---------------------------- 141
           + EM T G   + G + +  L++I +     P                            
Sbjct: 209 MAEMIT-GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFA 267

Query: 142 -RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
                       L+ +    +  +R    T  + L
Sbjct: 268 SILTNASPLAVNLLEKMLVLDAEQRV---TAGEAL 299

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.5 bits (95), Expect = 7e-06
 Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 239
             E  L    G+++ I+       WW   +LST   G  P N + P 
Sbjct: 14  RTETDLSFKKGERLQIVNNTEG-DWWLAHSLSTGQTGYIPSNYVAPS 59

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 1e-05
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            +  ++    GD I+ ++   E  W  G    T   GM P N
Sbjct: 15  ADADEVSFKDGDAIINVQAIDEG-WMYGTVQRTGRTGMLPAN 55

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.4 bits (92), Expect = 2e-05
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            E+ +L     D+I+ IE   +  WW G+     + G+FP N
Sbjct: 12  AEDNELTFVENDKIINIEFVDD-DWWLGELEKDGSKGLFPSN 52

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.5 bits (87), Expect = 9e-05
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPD 245
            E   L ++ G + +I+E   + HWW+ ++    + G  P N +   +    D
Sbjct: 14  TEAHDLRLERGQEYIILE-KNDLHWWRARDKYG-SEGYIPSNYVTGKKSNNLD 64

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 1e-04
 Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
                L    GDQ+V++E   E  WWK ++L+T   G  P N
Sbjct: 16  IHHEDLSFQKGDQMVVLEESGE--WWKARSLATRKEGYIPSN 55

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 1e-04
 Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
             + +L    GD + ++  + + +W+K +       G  P+N
Sbjct: 12  TADDELSFKRGDILKVLNEECDQNWYKAEL--NGKDGFIPKN 51

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (86), Expect = 1e-04
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
             +G L  + G+Q+ I+E   E  WWK Q+L+T   G  P N
Sbjct: 18  SHDGDLGFEKGEQLRILEQSGE--WWKAQSLTTGQEGFIPFN 57

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 2/47 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 239
             +  L I  G+++ ++  +    W + Q       G  P N + P+
Sbjct: 12  SGDNTLSITKGEKLRVLGYNHNGEWCEAQT--KNGQGWVPSNYITPV 56

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.1 bits (86), Expect = 1e-04
 Identities = 9/42 (21%), Positives = 20/42 (47%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           + +  L    GD + ++  + +  W  G++ +T   G FP +
Sbjct: 20  NNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSS 61

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 39.8 bits (92), Expect = 2e-04
 Identities = 17/175 (9%), Positives = 40/175 (22%), Gaps = 40/175 (22%)

Query: 36  NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHN 95
             I        +++ +          D+G+  +                   P   + + 
Sbjct: 148 MGIMHRDVKPHNVM-IDHEHRKLRLIDWGLAEFYHPGQEYNVRVAS-RYFKGPELLVDYQ 205

Query: 96  QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR-------------------- 135
            +  + D W  G  +  M       + G +    L +I +                    
Sbjct: 206 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 265

Query: 136 ------------EGERLPRPEACPV---EVYALMRQCWSKNPAERPKFSTLKDCL 175
                         ER    E   +   E    + +    +   R    T ++ +
Sbjct: 266 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL---TAREAM 317

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 2e-04
 Identities = 10/42 (23%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
                L +  GD+  I+E +    WW+ ++ +    G  P N
Sbjct: 20  MNANDLQLRKGDEYFILE-ESNLPWWRARDKNG-QEGYIPSN 59

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.4 bits (91), Expect = 2e-04
 Identities = 22/158 (13%), Positives = 46/158 (29%), Gaps = 36/158 (22%)

Query: 50  ILFFSSSSSSSGDFGMMRY---SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMF 106
           +L  ++      DFG+ R      +    +TE         P   L    ++++ D W  
Sbjct: 140 LLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSV 199

Query: 107 GVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEA--------------------- 145
           G  + EM +     + G + +  L  I        + +                      
Sbjct: 200 GCILAEMLS-NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV 258

Query: 146 --------CPVEVYALMRQCWSKNPAERPKFSTLKDCL 175
                      +   L+ +  + NP +R     ++  L
Sbjct: 259 PWNRLFPNADSKALDLLDKMLTFNPHKRI---EVEQAL 293

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.4 bits (84), Expect = 3e-04
 Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
             E  L    GD + I+    + +W+K +N      G+ P N
Sbjct: 18  TAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPAN 58

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.7 bits (82), Expect = 3e-04
 Identities = 11/42 (26%), Positives = 20/42 (47%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            ++ ++ I  GD+I ++  D    W K  N +T   G+ P  
Sbjct: 11  KDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTT 52

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (89), Expect = 4e-04
 Identities = 19/136 (13%), Positives = 34/136 (25%), Gaps = 33/136 (24%)

Query: 69  SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQ 128
           +++    MT          P   L    ++Q  D W  G  + E+ T G   + G + + 
Sbjct: 168 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHID 226

Query: 129 ILQKIDREGERLPRPE-----------------------------ACPVEVYALMRQCWS 159
            L+ I R                                              L+ +   
Sbjct: 227 QLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLV 286

Query: 160 KNPAERPKFSTLKDCL 175
            +  +R    T    L
Sbjct: 287 LDSDKRI---TAAQAL 299

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (83), Expect = 4e-04
 Identities = 12/48 (25%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPEC-HWWKGQNLSTFNIGMFPRNIMDPM 239
             E +L  + G+ + +IE       WWK +N     +G+ P+N +  +
Sbjct: 18  VTEEELNFEKGETMEVIEKPENDPEWWKCKNARG-QVGLVPKNYVVVL 64

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 5e-04
 Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 3/47 (6%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM 239
            EE +L   +G+ + +++      WW G+      +G+FP N + PM
Sbjct: 13  LEEDELGFRSGEVVEVLD-SSNPSWWTGRL--HNKLGLFPANYVAPM 56

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.1 bits (81), Expect = 6e-04
 Identities = 11/42 (26%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
           ++E  L    GD + I +   E  WW  ++      GM P  
Sbjct: 13  NDEEDLPFKKGDILRIRDKPEE-QWWNAEDSEG-KRGMIPVP 52

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 34.7 bits (80), Expect = 6e-04
 Identities = 7/42 (16%), Positives = 14/42 (33%), Gaps = 3/42 (7%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
               ++ +  GD + ++       WWK +       G  P  
Sbjct: 12  KSPREVTMKKGDILTLLN-STNKDWWKVEV--NDRQGFVPAA 50

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 8e-04
 Identities = 15/57 (26%), Positives = 21/57 (36%), Gaps = 4/57 (7%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISR 249
             E +L       I  +E   E  WW+G          FP N ++ M    P+ I R
Sbjct: 18  QREDELTFIKSAIIQNVE-KQEGGWWRGD-YGGKKQLWFPSNYVEEM--VNPEGIHR 70

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.0 bits (78), Expect = 0.002
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 4/44 (9%)

Query: 193 DEEGKLYIDAGDQIVIIE--GDPECHWWKGQNLSTFNIGMFPRN 234
             + +L +  GD + II    + E  WW  +       G  PRN
Sbjct: 16  QNDDELPMKEGDCMTIIHREDEDEIEWWWARL--NDKEGYVPRN 57

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (78), Expect = 0.002
 Identities = 9/46 (19%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP 238
            +   L    GD I+++       W +G++     +G+FP+  ++ 
Sbjct: 17  TQPEDLEFQEGDIILVLS-KVNEEWLEGES--KGKVGIFPKVFVED 59

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (78), Expect = 0.002
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 6/58 (10%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRP 250
             E +L +  GD I +     E  WW+G        G FP N +  +   +  + S P
Sbjct: 22  TNEDELSVCKGDIIYVTR-VEEGGWWEGTL--NGRTGWFPSNYVREI---KSSERSGP 73

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)

Query: 193 DEEGKLYIDAGDQIVIIE-GDPECHWWKGQNLSTFNIGMFPRN 234
           +E G L    GD I I++  D +  WW G+       G+FP N
Sbjct: 13  EESGDLPFRKGDVITILKKSDSQNDWWTGRV--NGREGIFPAN 53

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.003
 Identities = 8/58 (13%), Positives = 19/58 (32%), Gaps = 3/58 (5%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPDDISRP 250
            E  ++ +  G+ + +I    +  WW  +       G FP   +    +       + 
Sbjct: 26  VEGDEVSLLEGEAVEVIHKLLD-GWWVIRK--DDVTGYFPSMYLQKSGQDVSQAQRQI 80

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 3/42 (7%)

Query: 193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRN 234
            E+ +L    G+ I +++     +WW+G+N      G+FP N
Sbjct: 14  VEDNELTFKHGELITVLDDSDA-NWWQGEN--HRGTGLFPSN 52

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	251
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.98
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.95
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.37
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	97.28
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	95.96
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	94.64
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	94.54
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	94.16
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	94.16
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	93.83
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	93.81
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	93.55
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	93.35
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	92.98
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	92.78
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	92.75
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	92.63
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	92.59
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	92.38
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	92.16
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	92.09
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	92.08
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	92.01
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	91.91
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	91.87
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	91.85
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	91.69
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	91.53
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	91.32
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	91.21
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	91.17
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	90.22
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	90.17
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	89.87
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	89.67
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	89.38
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	89.31
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	89.19
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	88.28
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	87.89
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	87.75
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	87.71
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	87.01
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	87.01
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	86.36
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	85.89
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	85.76
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	85.43
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	83.89
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	82.54
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	81.36
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	80.81
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	80.05

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-44  Score=297.94  Aligned_cols=175  Identities=22%  Similarity=0.445  Sum_probs=151.5

Q ss_pred             CcccccchhHHHHHhcCCCC------------------------------CCCchhhHHhhhhhhCCcccCCCCCCCceE
Q psy2787           1 MSANFAELNAFQENYTEPCR------------------------------KPLPPERRGYGTFSVNNICSCQFSSSSLLI   50 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~------------------------------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~i   50 (251)
                      |.+||++.|+|.+.+.....                              .++.|+++||+|||+++|+||||||+|  |
T Consensus       118 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~N--i  195 (325)
T d1rjba_         118 LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN--V  195 (325)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG--E
T ss_pred             EEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhc--c
Confidence            46899999999998764322                              245688899999999999999999999  9


Q ss_pred             EEccCCceEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHH
Q psy2787          51 LFFSSSSSSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQI  129 (251)
Q Consensus        51 l~~~~~~~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~  129 (251)
                      +++.++.+||+|||+|+..... .........+|+.|||||++.+..++.++|||||||++|||+++|..||.+.+..+.
T Consensus       196 ll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~  275 (325)
T d1rjba_         196 LVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDAN  275 (325)
T ss_dssp             EEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH
T ss_pred             ccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHH
Confidence            9999999999999999874332 233445567899999999999999999999999999999999768999998777666


Q ss_pred             HHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         130 LQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       130 ~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ...+...+.+++.|..+++++.+|+.+||+.||++|||+++|+++|..
T Consensus       276 ~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         276 FYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            666667888888889999999999999999999999999999999863

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-43  Score=286.65  Aligned_cols=178  Identities=20%  Similarity=0.336  Sum_probs=140.8

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |++||++.|+|.+++....        ..++.|+++||+|||+++|+||||||+|  ||++.++.+||+|||+|+.....
T Consensus        80 lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~N--iLl~~~~~~Kl~DFGla~~~~~~  157 (276)
T d1uwha_          80 IVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNN--IFLHEDLTVKIGDFGLATVKSRW  157 (276)
T ss_dssp             EEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEEETTSSEEECCCCCSCC----
T ss_pred             EEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHH--EEEcCCCCEEEccccceeecccc
Confidence            4689999999998774322        2346677899999999999999999999  99999999999999999875432


Q ss_pred             -ceeecCCCCcCcccCCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC----CCC
Q psy2787          73 -CYVMTERKPLPCPWCPMESLKH---NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP----RPE  144 (251)
Q Consensus        73 -~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~  144 (251)
                       .........||+.|||||++.+   ..++.++|||||||++|||++ |+.||.+.+.......+...+...+    .+.
T Consensus       158 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~t-g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~  236 (276)
T d1uwha_         158 SGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMT-GQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS  236 (276)
T ss_dssp             --------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHH-SSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCT
T ss_pred             CCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHH-CCCCCCCCChHHHHHHHHhcCCCCCcchhccc
Confidence             2233455688999999999864   358899999999999999999 9999998776554444434443332    356


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      .+|+++.+++.+||+.||++|||+.+|+++|+.+.++
T Consensus       237 ~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~  273 (276)
T d1uwha_         237 NCPKAMKRLMAECLKKKRDERPLFPQILASIELLARS  273 (276)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             cchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHc
Confidence            7899999999999999999999999999999877643

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-43  Score=293.25  Aligned_cols=179  Identities=26%  Similarity=0.474  Sum_probs=145.5

Q ss_pred             CcccccchhHHHHHhcCC-----------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEP-----------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      +.+||++.|+|.+++...                       +..++.|+++||+|||+++|+||||||+|  ||++.++.
T Consensus        95 iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~N--ILl~~~~~  172 (299)
T d1ywna1          95 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN--ILLSEKNV  172 (299)
T ss_dssp             EEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECGGGC
T ss_pred             EEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccc--eeECCCCc
Confidence            368999999999876432                       12345688999999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+|+..... .........||+.|||||++.+..++.++|||||||++|||++++..||.+....+....+...
T Consensus       173 ~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~  252 (299)
T d1ywna1         173 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  252 (299)
T ss_dssp             EEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH
T ss_pred             EEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhc
Confidence            999999999874433 2233455679999999999999999999999999999999999456789887665555555567


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +.+++.+..+++++.+++.+||+.||++|||+.+++++|+.+.++
T Consensus       253 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~  297 (299)
T d1ywna1         253 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  297 (299)
T ss_dssp             TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence            778888889999999999999999999999999999999987544

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.3e-43  Score=285.33  Aligned_cols=177  Identities=24%  Similarity=0.501  Sum_probs=140.6

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||++.|+|.+++.....        .++.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        77 lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~N--ill~~~~~~Kl~DFGla~~~~~~  154 (263)
T d1sm2a_          77 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARN--CLVGENQVIKVSDFGMTRFVLDD  154 (263)
T ss_dssp             EEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGG--EEECGGGCEEECSCC--------
T ss_pred             EEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhh--eeecCCCCeEecccchheeccCC
Confidence            46899999999887654322        245677899999999999999999999  99999999999999999886555


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........||..|+|||++.+..++.++|||||||++|||+++|.+||.+.+..++...+. .+.+...|..+++++.+
T Consensus       155 ~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~-~~~~~~~p~~~~~~l~~  233 (263)
T d1sm2a_         155 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQ  233 (263)
T ss_dssp             ----------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHH-HTCCCCCCTTSCHHHHH
T ss_pred             CceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHH-hcCCCCCccccCHHHHH
Confidence            44444556789999999999999999999999999999999995677788777777877774 56677778889999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ++.+||+.||++|||+++|+++|+++.+
T Consensus       234 li~~cl~~~p~~Rps~~~il~~L~~i~e  261 (263)
T d1sm2a_         234 IMNHCWKERPEDRPAFSRLLRQLAEIAE  261 (263)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHccCCHhHCcCHHHHHHHHHHHHh
Confidence            9999999999999999999999998754

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-43  Score=286.40  Aligned_cols=180  Identities=23%  Similarity=0.490  Sum_probs=154.6

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |++||++.|+|.+++....        ..++.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+|+.....
T Consensus        85 lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~N--ill~~~~~~Kl~DFGla~~~~~~  162 (285)
T d1u59a_          85 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARN--VLLVNRHYAKISDFGLSKALGAD  162 (285)
T ss_dssp             EEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEEEETTEEEECCCTTCEECTTC
T ss_pred             EEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhh--eeeccCCceeeccchhhhccccc
Confidence            4789999999998764432        2346788899999999999999999999  99999999999999999985543


Q ss_pred             ce--eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 CY--VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      ..  .......+|+.|+|||++.+..++.++|||||||++|||++.|..||.+.+..++...+ ..+.+++.|+.+|+++
T Consensus       163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i-~~~~~~~~p~~~~~~l  241 (285)
T d1u59a_         163 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRMECPPECPPEL  241 (285)
T ss_dssp             SCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH-HTTCCCCCCTTCCHHH
T ss_pred             ccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCcCCHHH
Confidence            32  23345578899999999998899999999999999999998789999998888887777 4677788888999999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      .+++.+||+.||++|||+.+|++.|+....+..
T Consensus       242 ~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~  274 (285)
T d1u59a_         242 YALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA  274 (285)
T ss_dssp             HHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999987765543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-42  Score=286.17  Aligned_cols=177  Identities=24%  Similarity=0.528  Sum_probs=141.4

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.|+|.+......        ..++.|+++||+|||+++|+||||||+|  ||++.++.+||+|||+|+.....
T Consensus       104 iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~N--ILl~~~~~~Kl~DFGla~~~~~~  181 (299)
T d1jpaa_         104 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARN--ILVNSNLVCKVSDFGLSRFLEDD  181 (299)
T ss_dssp             EEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTCCEEECCC---------
T ss_pred             EEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccce--EEECCCCcEEECCcccceEccCC
Confidence            4689999999988665432        2346678899999999999999999999  99999999999999999875443


Q ss_pred             cee----ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcH
Q psy2787          73 CYV----MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        73 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      ...    ......+|+.|||||++.+..++.++|||||||++|||+++|..||.+.+..++...+. .+.+++.+..++.
T Consensus       182 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~-~~~~~~~~~~~~~  260 (299)
T d1jpaa_         182 TSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLPPPMDCPS  260 (299)
T ss_dssp             --------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTCCH
T ss_pred             CCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCccchH
Confidence            221    12234578899999999999999999999999999999986899999998888888774 5677778888999


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ++.+++.+||+.||++|||+.+|++.|+.+.+
T Consensus       261 ~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~  292 (299)
T d1jpaa_         261 ALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR  292 (299)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence            99999999999999999999999999987654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-43  Score=285.96  Aligned_cols=179  Identities=26%  Similarity=0.557  Sum_probs=151.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.|+|.+.....       ...++.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus        84 lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~N--ill~~~~~~kl~DFGla~~~~~~~  161 (277)
T d1xbba_          84 LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARN--VLLVTQHYAKISDFGLSKALRADE  161 (277)
T ss_dssp             EEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEEETTEEEECCCTTCEECCTTC
T ss_pred             EEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchh--hcccccCcccccchhhhhhccccc
Confidence            468999999998876542       23456688899999999999999999999  999999999999999998754332


Q ss_pred             --eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          74 --YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        74 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                        ........||+.|||||++.+..++.++|||||||++|||++.|..||.+.+..++...+ ..+.+++.|..+|.++.
T Consensus       162 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i-~~~~~~~~p~~~~~~~~  240 (277)
T d1xbba_         162 NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML-EKGERMGCPAGCPREMY  240 (277)
T ss_dssp             SEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCHHHH
T ss_pred             cccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHH-HcCCCCCCCcccCHHHH
Confidence              223345678999999999999899999999999999999997689999998888877776 46777888889999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPAV  182 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~~  182 (251)
                      +++.+||+.||++|||+++|++.|+......
T Consensus       241 ~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  271 (277)
T d1xbba_         241 DLMNLCWTYDVENRPGFAAVELRLRNYYYDV  271 (277)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHhhCHHhhc
Confidence            9999999999999999999999887765443

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-43  Score=284.52  Aligned_cols=169  Identities=14%  Similarity=0.235  Sum_probs=146.5

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.|+|.+.+...       ...++.|+++||+|||++||+||||||+|  |+++.++.+||+|||+|+......
T Consensus        83 ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~N--ill~~~~~~kl~DFG~a~~~~~~~  160 (263)
T d2j4za1          83 LILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN--LLLGSAGELKIADFGWSVHAPSSR  160 (263)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTSCEEECCCCSCSCCCCCC
T ss_pred             EEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccc--ceecCCCCEeecccceeeecCCCc
Confidence            468999999998865432       23457788999999999999999999999  999999999999999998765442


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         .....||+.|||||++.+..++.++||||+||++|||++ |+.||.+.+..+....+...  .+..|..+++++.++
T Consensus       161 ---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~l  234 (263)
T d2j4za1         161 ---RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV-GKPPFEANTYQETYKRISRV--EFTFPDFVTEGARDL  234 (263)
T ss_dssp             ---CEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHTT--CCCCCTTSCHHHHHH
T ss_pred             ---ccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhc-CCCCCCCCCHHHHHHHHHcC--CCCCCccCCHHHHHH
Confidence               234578999999999999999999999999999999999 99999998888888887544  345567899999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+||+.||++|||++++++|.+-
T Consensus       235 i~~~L~~dp~~R~t~~eil~hp~~  258 (263)
T d2j4za1         235 ISRLLKHNPSQRPMLREVLEHPWI  258 (263)
T ss_dssp             HHHHTCSSGGGSCCHHHHHTCHHH
T ss_pred             HHHHccCCHhHCcCHHHHHcCcCc
Confidence            999999999999999999998654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-42  Score=283.52  Aligned_cols=177  Identities=27%  Similarity=0.563  Sum_probs=152.6

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |.+||++.|+|.+.....         +..++.|+++||+|||+++|+||||||+|  |++++++.+||+|||+|+....
T Consensus        84 iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~N--Ill~~~~~~Kl~DFGla~~~~~  161 (272)
T d1qpca_          84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAAN--ILVSDTLSCKIADFGLARLIED  161 (272)
T ss_dssp             EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTSCEEECCCTTCEECSS
T ss_pred             EEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhh--eeeecccceeeccccceEEccC
Confidence            468999999998754422         23457788899999999999999999999  9999999999999999998766


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........+|+.|||||++.+..++.++|||||||++|||+++|.+||...+..++...+ ..+.+++.+..++.++.
T Consensus       162 ~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i-~~~~~~~~p~~~~~~l~  240 (272)
T d1qpca_         162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELY  240 (272)
T ss_dssp             SCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCHHHH
T ss_pred             CccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHH-HhcCCCCCcccChHHHH
Confidence            65555666788999999999998889999999999999999999556667777777777776 46677778889999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +++.+||+.||++|||+++|++.|+.+..
T Consensus       241 ~li~~cl~~~P~~Rpt~~ei~~~L~~~ft  269 (272)
T d1qpca_         241 QLMRLCWKERPEDRPTFDYLRSVLEDFFT  269 (272)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHhhhhhh
Confidence            99999999999999999999999987654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.8e-42  Score=281.05  Aligned_cols=177  Identities=28%  Similarity=0.550  Sum_probs=149.4

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.|++.+.+....         ..++.|+++||+|||++||+||||||+|  ||++.++.+||+|||+|+....
T Consensus        90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~N--ILl~~~~~~Kl~DFG~a~~~~~  167 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARN--CLVGENHLVKVADFGLSRLMTG  167 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGCEEECCCCCTTTCCS
T ss_pred             EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCe--EEECCCCcEEEccccceeecCC
Confidence            4689999999998764322         2234678899999999999999999999  9999999999999999998766


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........+++.|+|||++.+..++.++|||||||++|||+++|.+||.+.+..++...+ ..+.+++.+..++.++.
T Consensus       168 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~  246 (287)
T d1opja_         168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL-EKDYRMERPEGCPEKVY  246 (287)
T ss_dssp             SSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCHHHH
T ss_pred             CCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH-hcCCCCCCCccchHHHH
Confidence            55555566678899999999999999999999999999999999444455666666665555 56777888889999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +|+.+||+.||++|||+.++++.|+.+..
T Consensus       247 ~li~~cl~~dP~~Rps~~ei~~~L~~~~~  275 (287)
T d1opja_         247 ELMRACWQWNPSDRPSFAEIHQAFETMFQ  275 (287)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHTTS
T ss_pred             HHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999887653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.4e-42  Score=280.29  Aligned_cols=178  Identities=28%  Similarity=0.622  Sum_probs=141.5

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.|++........        ..++.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+|+.....
T Consensus        84 iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~N--Ill~~~~~~Kl~DfG~a~~~~~~  161 (273)
T d1mp8a_          84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARN--VLVSSNDCVKLGDFGLSRYMEDS  161 (273)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEEEETTEEEECC----------
T ss_pred             EEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhh--eeecCCCcEEEccchhheeccCC
Confidence            4689999999987644322        2345688899999999999999999999  99999999999999999986655


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........+|+.|+|||++.+..++.++|||||||++|||++.|.+||.+.+..++...+. .+.+++.++.+|+++.+
T Consensus       162 ~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~  240 (273)
T d1mp8a_         162 TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYS  240 (273)
T ss_dssp             ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTCCHHHHH
T ss_pred             cceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHH
Confidence            44455566789999999999999999999999999999999987899999988888888874 56677888899999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ++.+||+.||++|||+.+|+++|..+.+.
T Consensus       241 li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         241 LMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            99999999999999999999999887654

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-41  Score=275.59  Aligned_cols=174  Identities=24%  Similarity=0.496  Sum_probs=152.1

Q ss_pred             CcccccchhHHHHHhcCCCC--------CCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPCR--------KPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~~--------~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.|++.........        +++.|+++||+|||++||+||||||+|  |+++.++.+||+|||+++.....
T Consensus        76 iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~N--ill~~~~~~kl~DfG~a~~~~~~  153 (258)
T d1k2pa_          76 IITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARN--CLVNDQGVVKVSDFGLSRYVLDD  153 (258)
T ss_dssp             EEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGG--EEECTTCCEEECCCSSCCBCSSS
T ss_pred             EEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhcCccccccccee--EEEcCCCcEEECcchhheeccCC
Confidence            46899999998887544322        345688899999999999999999999  99999999999999999876555


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      .........+|+.|+|||++.+..++.++|||||||++|||++.|+.||.+.+..++...+. .+.+++.|..+++++.+
T Consensus       154 ~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~~~~l~~  232 (258)
T d1k2pa_         154 EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYRPHLASEKVYT  232 (258)
T ss_dssp             SCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCHHHHH
T ss_pred             CceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHH-hCCCCCCcccccHHHHH
Confidence            44445557789999999999999999999999999999999986899999999888888874 56777888899999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+||+.||++|||+++++++|.+
T Consensus       233 li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         233 IMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHccCCHhHCcCHHHHHHHhhC
Confidence            9999999999999999999999864

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-41  Score=277.91  Aligned_cols=177  Identities=29%  Similarity=0.571  Sum_probs=140.3

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +.+||+..+.+.+......        .+++.|++.||+|||+++|+||||||+|  ||++.++.+||+|||+++.....
T Consensus        86 ~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~N--ILl~~~~~~Kl~DFGla~~~~~~  163 (283)
T d1mqba_          86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARN--ILVNSNLVCKVSDFGLSRVLEDD  163 (283)
T ss_dssp             EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTCCEEECCCCC-------
T ss_pred             EEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccccccccCccccce--EEECCCCeEEEcccchhhcccCC
Confidence            3578888888877554322        2456678899999999999999999999  99999999999999999875433


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .  ........||+.|||||++.+..++.++|||||||++|||+++|.+|+.+.+..++...+ ..+.+++.+..++.++
T Consensus       164 ~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~l  242 (283)
T d1mqba_         164 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-NDGFRLPTPMDCPSAI  242 (283)
T ss_dssp             ----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HTTCCCCCCTTCBHHH
T ss_pred             CccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHH-hccCCCCCchhhHHHH
Confidence            2  122334568899999999999999999999999999999999455666666777777766 5677888888999999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .+++.+||+.||++|||+.+|++.|+.+.+
T Consensus       243 ~~li~~cl~~~p~~RPt~~eil~~L~~l~~  272 (283)
T d1mqba_         243 YQLMMQCWQQERARRPKFADIVSILDKLIR  272 (283)
T ss_dssp             HHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCcCCHhHCcCHHHHHHHHHHHhh
Confidence            999999999999999999999999987654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-42  Score=281.72  Aligned_cols=173  Identities=17%  Similarity=0.245  Sum_probs=146.2

Q ss_pred             CcccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           1 MSANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      |.+||++.|+|.+.....      ...++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+|+.......
T Consensus        94 ivmEy~~gg~L~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~N--ILl~~~~~vkl~DFG~a~~~~~~~~  171 (293)
T d1yhwa1          94 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDN--ILLGMDGSVKLTDFGFCAQITPEQS  171 (293)
T ss_dssp             EEEECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTCCEEECCCTTCEECCSTTC
T ss_pred             EEEEecCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHH--eEECCCCcEeeccchhheeeccccc
Confidence            578999999998865432      33567788899999999999999999999  9999999999999999987644322


Q ss_pred             eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC-CCCCCCCCCcHHHHHH
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG-ERLPRPEACPVEVYAL  153 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~l  153 (251)
                       ......||+.|+|||++.+..++.++||||+||++|+|++ |..||.+.+..+....+...+ ...+.+..++.++.++
T Consensus       172 -~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  249 (293)
T d1yhwa1         172 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE-GEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF  249 (293)
T ss_dssp             -CBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHH
T ss_pred             -cccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhh-CCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHH
Confidence             3345679999999999999999999999999999999999 999999887766666554443 3345567799999999


Q ss_pred             HHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      +.+||+.||++|||+.++++|-+-
T Consensus       250 i~~~L~~dP~~R~s~~eil~Hp~~  273 (293)
T d1yhwa1         250 LNRCLDMDVEKRGSAKELLQHQFL  273 (293)
T ss_dssp             HHHHTCSSTTTSCCHHHHTTCGGG
T ss_pred             HHHHccCChhHCcCHHHHhcCHhh
Confidence            999999999999999999988553

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-42  Score=281.48  Aligned_cols=170  Identities=13%  Similarity=0.225  Sum_probs=135.8

Q ss_pred             CcccccchhHHHHHhcC-----------CCCCCCchhhHHhhhhhhCC-----cccCCCCCCCceEEEccCCceEEccCC
Q psy2787           1 MSANFAELNAFQENYTE-----------PCRKPLPPERRGYGTFSVNN-----ICSCQFSSSSLLILFFSSSSSSSGDFG   64 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-----------~~~~~~~~~~~gl~~lH~~~-----iiHrdlkp~ni~il~~~~~~~kl~DFG   64 (251)
                      |.+||++.|+|.+.+..           ....++.|++.||+|||+++     |+||||||+|  |+++.++.+||+|||
T Consensus        82 ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~N--Ill~~~~~vkl~DFG  159 (269)
T d2java1          82 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN--VFLDGKQNVKLGDFG  159 (269)
T ss_dssp             EEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGG--EEECTTSCEEECCHH
T ss_pred             EEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhh--cCcCCCCcEEEeecc
Confidence            46899999999886532           13356778899999999876     9999999999  999999999999999


Q ss_pred             CCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q psy2787          65 MMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPE  144 (251)
Q Consensus        65 la~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  144 (251)
                      +|+....... ......||+.|||||++.+..++.++|||||||++|||++ |..||.+.+..++...+.. +...+.+.
T Consensus       160 ~a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~t-g~~Pf~~~~~~~~~~~i~~-~~~~~~~~  236 (269)
T d2java1         160 LARILNHDTS-FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA-LMPPFTAFSQKELAGKIRE-GKFRRIPY  236 (269)
T ss_dssp             HHHHC------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHH-TCCCCCCT
T ss_pred             ceeecccCCC-ccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhh-CCCCCCCCCHHHHHHHHHc-CCCCCCCc
Confidence            9988654322 2345678999999999999999999999999999999999 9999999988888888754 44445677


Q ss_pred             CCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q psy2787         145 ACPVEVYALMRQCWSKNPAERPKFSTLKDCL  175 (251)
Q Consensus       145 ~~~~~~~~li~~cl~~dP~~Rps~~~il~~l  175 (251)
                      .+++++.+++.+||+.||++|||+.++++|.
T Consensus       237 ~~s~~l~~li~~~L~~dp~~Rps~~ell~hp  267 (269)
T d2java1         237 RYSDELNEIITRMLNLKDYHRPSVEEILENP  267 (269)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             ccCHHHHHHHHHHcCCChhHCcCHHHHHhCC
Confidence            8999999999999999999999999999874

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-42  Score=278.65  Aligned_cols=173  Identities=15%  Similarity=0.218  Sum_probs=141.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-   72 (251)
                      |.+||++.|+|.+.+...       ...++.|+++||+|||++||+||||||+|  ||++.++.+||+|||+|+..... 
T Consensus        80 ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~N--ILl~~~~~~KL~DFG~a~~~~~~~  157 (271)
T d1nvra_          80 LFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPEN--LLLDERDNLKISDFGLATVFRYNN  157 (271)
T ss_dssp             EEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEECTTCCEEECCCTTCEECEETT
T ss_pred             EEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHH--EEECCCCCEEEccchhheeeccCC
Confidence            468999999999877543       23467788899999999999999999999  99999999999999999975433 


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChh-HHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGM-QILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .........||+.|||||++.+..+ +.++||||+||++|||++ |+.||.+.... .....+............+++++
T Consensus       158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~  236 (271)
T d1nvra_         158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA-GELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP  236 (271)
T ss_dssp             EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHH-SSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred             ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHh-CCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHH
Confidence            2334456789999999999988776 578999999999999999 99999775543 33333333333334446789999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      .+++.+||+.||++|||++++++|-+
T Consensus       237 ~~li~~~L~~dP~~R~t~~eil~hpw  262 (271)
T d1nvra_         237 LALLHKILVENPSARITIPDIKKDRW  262 (271)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHTTCTT
T ss_pred             HHHHHHHcCCChhHCcCHHHHhcCHh
Confidence            99999999999999999999988765

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-41  Score=274.99  Aligned_cols=176  Identities=43%  Similarity=0.879  Sum_probs=150.0

Q ss_pred             CcccccchhHHHHHhcC--------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTE--------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~--------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |++||++.+++.++...        .+..++.|++.||.|||+++|+||||||+|  |+++.++.+||+|||+++.....
T Consensus        87 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~N--Ill~~~~~vkl~DfGl~~~~~~~  164 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN--LLLATRDLVKIGDFGLMRALPQN  164 (273)
T ss_dssp             EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG--EEEEETTEEEECCCTTCEECCC-
T ss_pred             eeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHH--hccccccceeeccchhhhhcccC
Confidence            46899999888875432        233567788899999999999999999999  99999999999999999985433


Q ss_pred             c--eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          73 C--YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        73 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                      .  ........+|..|+|||++.+..++.++||||||+++|||+++|..||.+.+..+....+...+.+++.+..+|.++
T Consensus       165 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l  244 (273)
T d1u46a_         165 DDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDI  244 (273)
T ss_dssp             CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHH
T ss_pred             CCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHH
Confidence            2  23334556788999999999999999999999999999999868999999999999899888888888889999999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      .+++.+||+.||++|||+.+|++.|.+.
T Consensus       245 ~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         245 YNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            9999999999999999999999888764

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-41  Score=279.23  Aligned_cols=173  Identities=15%  Similarity=0.156  Sum_probs=143.6

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.|+|.+.....       ...++.|++.||+|||++||+||||||+|  |++++++.+||+|||+|+......
T Consensus        85 ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~N--Ill~~~~~vkl~DFG~a~~~~~~~  162 (288)
T d1uu3a_          85 FGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN--ILLNEDMHIQITDFGTAKVLSPES  162 (288)
T ss_dssp             EEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTSCEEECCCTTCEECC---
T ss_pred             EEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccc--cccCCCceEEecccccceecccCC
Confidence            478999999998865431       23456788899999999999999999999  999999999999999999764332


Q ss_pred             -eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 -YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                       ........||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+....  ...+..+++++.+
T Consensus       163 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~-g~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~  239 (288)
T d1uu3a_         163 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA-GLPPFRAGNEYLIFQKIIKLE--YDFPEKFFPKARD  239 (288)
T ss_dssp             -------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHTTC--CCCCTTCCHHHHH
T ss_pred             cccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhh-CCCCCCCcCHHHHHHHHHcCC--CCCCccCCHHHHH
Confidence             223445679999999999999999999999999999999999 999999988888888886543  4556789999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                      |+.+||+.||++|||+++++.+.+-+
T Consensus       240 li~~~L~~dP~~R~t~~e~~~~~~i~  265 (288)
T d1uu3a_         240 LVEKLLVLDATKRLGCEEMEGYGPLK  265 (288)
T ss_dssp             HHHTTSCSSGGGSTTSGGGTCHHHHH
T ss_pred             HHHHHccCCHhHCcCHHHHcCCHHHH
Confidence            99999999999999999987665433

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3e-41  Score=279.47  Aligned_cols=155  Identities=30%  Similarity=0.663  Sum_probs=134.2

Q ss_pred             CCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCch
Q psy2787          22 PLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQA  100 (251)
Q Consensus        22 ~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~  100 (251)
                      ++.|++.||+|||+++|+||||||+|  ||++.++.+||+|||+|+..... .........+++.|+|||++.+..++.+
T Consensus       145 i~~qi~~gl~ylH~~~ivHrDlKp~N--ILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~k  222 (301)
T d1lufa_         145 IARQVAAGMAYLSERKFVHRDLATRN--CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTE  222 (301)
T ss_dssp             HHHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHhhhcccCCeEeeEEcccc--eEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChh
Confidence            46688899999999999999999999  99999999999999999874332 2233445678889999999999999999


Q ss_pred             hHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         101 SDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       101 ~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +|||||||++|||++++..||.+.+..++...+. .+..++.+..+++++.+|+.+||+.+|++|||+.+|++.|+++.
T Consensus       223 sDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~-~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         223 SDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR-DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             hhhccchhhHHHHHccCCCCCCCCCHHHHHHHHH-cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            9999999999999993467899998888888874 56677788899999999999999999999999999999998764

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-41  Score=273.80  Aligned_cols=169  Identities=15%  Similarity=0.232  Sum_probs=137.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCC--cccCCCCCCCceEEEc-cCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNN--ICSCQFSSSSLLILFF-SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~--iiHrdlkp~ni~il~~-~~~~~kl~DFGla~~~~   70 (251)
                      |.+||++.|+|.+++...       ...++.|+++||+|||+++  |+||||||+|  ||++ .++.+||+|||+|+...
T Consensus        89 ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~N--ILl~~~~~~~Kl~DFGla~~~~  166 (270)
T d1t4ha_          89 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDN--IFITGPTGSVKIGDLGLATLKR  166 (270)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGG--EEESSTTSCEEECCTTGGGGCC
T ss_pred             EEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhh--ceeeCCCCCEEEeecCcceecc
Confidence            468999999998866432       2346778899999999998  9999999999  9996 57899999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHhcCCCCCCCCCCcHH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDREGERLPRPEACPVE  149 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~  149 (251)
                      ...   .....||+.|||||++.+ .++.++||||+||++|||++ |+.||.+... .++...+.........+..++++
T Consensus       167 ~~~---~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~-g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  241 (270)
T d1t4ha_         167 ASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMAT-SEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE  241 (270)
T ss_dssp             TTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHH-SSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred             CCc---cCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHH-CCCCCCCcccHHHHHHHHHcCCCCcccCccCCHH
Confidence            432   234578999999999875 58999999999999999999 9999987554 45555654333333445678899


Q ss_pred             HHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         150 VYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +.+++.+||+.||++|||+.++++|-+
T Consensus       242 ~~~li~~~l~~dp~~R~s~~ell~Hp~  268 (270)
T d1t4ha_         242 VKEIIEGCIRQNKDERYSIKDLLNHAF  268 (270)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHHHccCCHhHCcCHHHHhCCcc
Confidence            999999999999999999999998753

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.7e-41  Score=277.26  Aligned_cols=169  Identities=17%  Similarity=0.216  Sum_probs=142.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.|++.......       ...++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+|+..... 
T Consensus        92 iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~N--ILl~~~~~~Kl~DFG~a~~~~~~-  168 (309)
T d1u5ra_          92 LVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGN--ILLSEPGLVKLGDFGSASIMAPA-  168 (309)
T ss_dssp             EEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGG--EEEETTTEEEECCCTTCBSSSSB-
T ss_pred             EEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcce--EEECCCCCEEEeecccccccCCC-
Confidence            568999988886533221       23467788899999999999999999999  99999999999999999865432 


Q ss_pred             eeecCCCCcCcccCCCcccCC---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKH---NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEV  150 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~---~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  150 (251)
                          ....||+.|||||++.+   ..++.++|||||||++|||++ |..||.+.+..+....+.........+..+++++
T Consensus       169 ----~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~  243 (309)
T d1u5ra_         169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE-RKPPLFNMNAMSALYHIAQNESPALQSGHWSEYF  243 (309)
T ss_dssp             ----CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHH-SSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHH
T ss_pred             ----CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHH-CCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHH
Confidence                34578999999999864   458899999999999999999 9999999888887777766665555567799999


Q ss_pred             HHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         151 YALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       151 ~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .+++.+||+.||++|||++++++|.+-
T Consensus       244 ~~li~~~L~~dP~~Rpt~~ell~Hp~~  270 (309)
T d1u5ra_         244 RNFVDSCLQKIPQDRPTSEVLLKHRFV  270 (309)
T ss_dssp             HHHHHHHTCSSGGGSCCHHHHTTCHHH
T ss_pred             HHHHHHHCcCChhHCcCHHHHHhCHHh
Confidence            999999999999999999999987553

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.7e-41  Score=277.13  Aligned_cols=171  Identities=13%  Similarity=0.222  Sum_probs=134.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc---cCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF---SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~---~~~~~kl~DFGla~~~~   70 (251)
                      |++||++.++|.+.+...       ...++.|++.||+|||++||+||||||+|  |++.   .++.+||+|||+|+...
T Consensus        84 lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~N--il~~~~~~~~~vkl~DFG~a~~~~  161 (307)
T d1a06a_          84 LIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPEN--LLYYSLDEDSKIMISDFGLSKMED  161 (307)
T ss_dssp             EEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEESSSSTTCCEEECCC-------
T ss_pred             EEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccc--eeecccCCCceEEEeccceeEEcc
Confidence            478999999999877542       23457788899999999999999999999  8874   57899999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~  148 (251)
                      ...  ......||+.|||||++.+..++.++||||+||++|||++ |..||.+....++...+.......+  .+..+|+
T Consensus       162 ~~~--~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  238 (307)
T d1a06a_         162 PGS--VLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC-GYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD  238 (307)
T ss_dssp             -------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCH
T ss_pred             CCC--eeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHh-CCCCCCCCCHHHHHHHHhccCCCCCCccccCCCH
Confidence            432  2345679999999999999999999999999999999999 9999999888888888876655443  3367999


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+++.+||+.||++|||+.++++|.+
T Consensus       239 ~~~~li~~~L~~dP~~R~s~~eil~hp~  266 (307)
T d1a06a_         239 SAKDFIRHLMEKDPEKRFTCEQALQHPW  266 (307)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHSTT
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHhcCHh
Confidence            9999999999999999999999999854

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.4e-41  Score=275.53  Aligned_cols=173  Identities=20%  Similarity=0.256  Sum_probs=143.3

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.|+|.+.+.+.        +..++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+|+.....
T Consensus        86 lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~N--Ill~~~~~~Kl~DFG~a~~~~~~  163 (288)
T d2jfla1          86 ILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGN--ILFTLDGDIKLADFGVSAKNTRT  163 (288)
T ss_dssp             EEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECHHH
T ss_pred             EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhh--eeECCCCCEEEEechhhhccCCC
Confidence            478999999988764321        23456788899999999999999999999  99999999999999999764332


Q ss_pred             ceeecCCCCcCcccCCCcccC-----CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC-CCCCCCCC
Q psy2787          73 CYVMTERKPLPCPWCPMESLK-----HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE-RLPRPEAC  146 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~-----~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~  146 (251)
                      . .......||+.|+|||++.     +..++.++||||+||++|||++ |..||.+.+..+....+..... ....+..+
T Consensus       164 ~-~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemlt-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (288)
T d2jfla1         164 I-QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE-IEPPHHELNPMRVLLKIAKSEPPTLAQPSRW  241 (288)
T ss_dssp             H-HHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHH-SSCTTTTSCGGGHHHHHHHSCCCCCSSGGGS
T ss_pred             c-ccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhh-CCCCCCCCCHHHHHHHHHcCCCCCCCccccC
Confidence            1 1334568899999999984     4557899999999999999999 9999999888888777765433 23445678


Q ss_pred             cHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         147 PVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       147 ~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++++.+++.+||+.||++|||+.++++|-+-
T Consensus       242 s~~~~~li~~~L~~dp~~R~t~~ell~hp~~  272 (288)
T d2jfla1         242 SSNFKDFLKKCLEKNVDARWTTSQLLQHPFV  272 (288)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            9999999999999999999999999988553

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-40  Score=277.00  Aligned_cols=177  Identities=24%  Similarity=0.538  Sum_probs=146.2

Q ss_pred             cccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           2 SANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      .+||+..+++.+.....        ..+++.|+++||+|||+++|+||||||+|  |+++.++.+||+|||+|+......
T Consensus        88 v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~N--Ill~~~~~~kl~DFGla~~~~~~~  165 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN--VLVKTPQHVKITDFGLAKLLGAEE  165 (317)
T ss_dssp             EEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEEEETTEEEECCCSHHHHTTTTC
T ss_pred             EEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhc--ceeCCCCCeEeeccccceeccccc
Confidence            46777778777754432        22345688899999999999999999999  999999999999999999854433


Q ss_pred             e-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHH
Q psy2787          74 Y-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYA  152 (251)
Q Consensus        74 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  152 (251)
                      . .......||+.|+|||++.++.++.++|||||||++|||+++|..||.+.+..++...+ ..+.+++.++.+++++.+
T Consensus       166 ~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i-~~~~~~~~p~~~~~~~~~  244 (317)
T d1xkka_         166 KEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSIL-EKGERLPQPPICTIDVYM  244 (317)
T ss_dssp             C--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHH-HHTCCCCCCTTBCHHHHH
T ss_pred             ccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-HcCCCCCCCcccCHHHHH
Confidence            2 23344568999999999999999999999999999999998789999998877777666 467778888899999999


Q ss_pred             HHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         153 LMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       153 li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      ++.+||+.||++|||+.+++++|..+...
T Consensus       245 li~~cl~~dP~~RPs~~eil~~l~~~~~~  273 (317)
T d1xkka_         245 IMVKCWMIDADSRPKFRELIIEFSKMARD  273 (317)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHhCCCChhhCcCHHHHHHHHHHHHhC
Confidence            99999999999999999999999877543

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-40  Score=271.88  Aligned_cols=176  Identities=27%  Similarity=0.560  Sum_probs=151.9

Q ss_pred             CcccccchhHHHHHhcCCC-----------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-----------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-----------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      |++||++.|++.+.+....                       ..++.|++.||+|||+++|+||||||+|  ||++.++.
T Consensus        96 ~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~N--iLl~~~~~  173 (299)
T d1fgka_          96 VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN--VLVTEDNV  173 (299)
T ss_dssp             EEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECTTCC
T ss_pred             EEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccc--eeecCCCC
Confidence            4689999999998775332                       2346688899999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCc-eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc
Q psy2787          58 SSSGDFGMMRYSQNDC-YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE  136 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~  136 (251)
                      +||+|||+++...... ........+|+.|+|||++.++.++.++||||||+++|||+++|..||.+.+..++...+ ..
T Consensus       174 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i-~~  252 (299)
T d1fgka_         174 MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLL-KE  252 (299)
T ss_dssp             EEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HT
T ss_pred             eEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHH-Hc
Confidence            9999999999754332 223445678889999999999999999999999999999998679999988888877766 46


Q ss_pred             CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         137 GERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       137 ~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      +.+++.+..+++++.+++.+||+.||++|||+.+|++.|+++.
T Consensus       253 ~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         253 GHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             TCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            7788888899999999999999999999999999999998774

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6e-40  Score=275.07  Aligned_cols=171  Identities=15%  Similarity=0.201  Sum_probs=147.4

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||++.|+|.+.+..       .+..++.|++.||+|||++||+||||||+|  ||++.+|.+||+|||+|+......
T Consensus        82 iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~N--ILl~~~g~vkl~DFG~a~~~~~~~  159 (337)
T d1o6la_          82 FVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLEN--LMLDKDGHIKITDFGLCKEGISDG  159 (337)
T ss_dssp             EEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTSCEEECCCTTCBCSCCTT
T ss_pred             cceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHH--eEecCCCCEEEeecccccccccCC
Confidence            46899999999886543       234567788899999999999999999999  999999999999999998754332


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                      . ......||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..++...+....  +..|..+++++.+|
T Consensus       160 ~-~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~-G~~pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~dl  235 (337)
T d1o6la_         160 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC-GRLPFYNQDHERLFELILMEE--IRFPRTLSPEAKSL  235 (337)
T ss_dssp             C-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHH
T ss_pred             c-ccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHH-CCCCCCCcCHHHHHHHHhcCC--CCCCccCCHHHHHH
Confidence            2 3445789999999999999999999999999999999999 999999999888888876553  45567899999999


Q ss_pred             HHHHhccCCCCCCC-----HHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERPK-----FSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rps-----~~~il~~l~~  177 (251)
                      |.+||+.||++|++     ++++++|-+-
T Consensus       236 i~~~L~~dP~~R~~~~~~~~~eil~Hp~f  264 (337)
T d1o6la_         236 LAGLLKKDPKQRLGGGPSDAKEVMEHRFF  264 (337)
T ss_dssp             HHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             HHhhccCCchhhcccccccHHHHHcCccc
Confidence            99999999999995     8899988654

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-40  Score=266.89  Aligned_cols=174  Identities=22%  Similarity=0.539  Sum_probs=144.1

Q ss_pred             CcccccchhHHHHHhcC---------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTE---------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~---------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      |.+||++.|+|.+++..         ...+++.|++.||+|||+++|+||||||+|  |+++.++.+|++|||+++....
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~N--il~~~~~~~kl~dfg~s~~~~~  155 (262)
T d1byga_          78 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARN--VLVSEDNVAKVSDFGLTKEASS  155 (262)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECTTSCEEECCCCC------
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHh--heecCCCCEeecccccceecCC
Confidence            47899999999886532         123467788899999999999999999999  9999999999999999987543


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      .    .....+|..|+|||++.+..++.++|||||||++|||+++|..||.+.+..++...+ ..+.+++.+..+++++.
T Consensus       156 ~----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~  230 (262)
T d1byga_         156 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVY  230 (262)
T ss_dssp             ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-TTTCCCCCCTTCCHHHH
T ss_pred             C----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-HcCCCCCCCccCCHHHH
Confidence            2    233456788999999998999999999999999999998678999988888888877 46677888889999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                      +++.+||+.||++|||+.+++++|+.+...
T Consensus       231 ~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         231 EVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            999999999999999999999999887543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-39  Score=267.05  Aligned_cols=177  Identities=24%  Similarity=0.472  Sum_probs=142.0

Q ss_pred             CcccccchhHHHHHhcCC---------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCC
Q psy2787           1 MSANFAELNAFQENYTEP---------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQN   71 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~---------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~   71 (251)
                      +.+||++.|++.......         +..++.+++.||+|||+++|+||||||+|  ||++.++.+||+|||+++....
T Consensus        88 lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~N--Ill~~~~~~kl~DfGla~~~~~  165 (285)
T d1fmka3          88 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN--ILVGENLVCKVADFGLARLIED  165 (285)
T ss_dssp             EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECGGGCEEECCCCTTC----
T ss_pred             EEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceE--EEECCCCcEEEcccchhhhccC
Confidence            468999999888765432         23456777899999999999999999999  9999999999999999987655


Q ss_pred             CceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          72 DCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        72 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                      ..........+|+.|+|||++....++.++|||||||++|||+++|.+|+.+....++...+. .+.+.+.+..+++++.
T Consensus       166 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~  244 (285)
T d1fmka3         166 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLH  244 (285)
T ss_dssp             ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTSCHHHH
T ss_pred             CCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH-hcCCCCCCcccCHHHH
Confidence            544445556789999999999999999999999999999999995556667777777777764 5667778889999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      +++.+||+.||++|||+++|++.|+....
T Consensus       245 ~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         245 DLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            99999999999999999999998877654

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.4e-39  Score=274.33  Aligned_cols=171  Identities=15%  Similarity=0.193  Sum_probs=144.9

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc--cCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF--SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~--~~~~~kl~DFGla~~~~   70 (251)
                      |.+||++.|+|.+.+....        ..++.|++.||+|||++||+||||||+|  |+++  .++.+||+|||+|+...
T Consensus       100 ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~N--Ill~~~~~~~vkL~DFG~a~~~~  177 (350)
T d1koaa2         100 MIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN--IMFTTKRSNELKLIDFGLTAHLD  177 (350)
T ss_dssp             EEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEESSTTSCCEEECCCTTCEECC
T ss_pred             EEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhH--eeeccCCCCeEEEeecchheecc
Confidence            5789999999998775332        3356788899999999999999999999  8885  46789999999998765


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~  148 (251)
                      ....  .....||+.|||||++.+..++.++||||+||++|+|++ |..||.+.+..+....+.......+.  ...+++
T Consensus       178 ~~~~--~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  254 (350)
T d1koaa2         178 PKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLS-GLSPFGGENDDETLRNVKSCDWNMDDSAFSGISE  254 (350)
T ss_dssp             TTSC--EEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCH
T ss_pred             cccc--cceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCH
Confidence            4432  234577999999999999999999999999999999999 99999999888888888766554433  256899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+|+.+||..||++|||+.++++|-+
T Consensus       255 ~~~~li~~~L~~dP~~R~t~~eil~hp~  282 (350)
T d1koaa2         255 DGKDFIRKLLLADPNTRMTIHQALEHPW  282 (350)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHHSTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            9999999999999999999999999854

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=3.6e-39  Score=268.38  Aligned_cols=168  Identities=18%  Similarity=0.237  Sum_probs=145.8

Q ss_pred             CcccccchhHHHHHhcCCC-------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEPC-------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +++||++.+++........       ..++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+|+..... 
T Consensus        81 ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~N--ILl~~~g~vkL~DFG~a~~~~~~-  157 (316)
T d1fota_          81 MIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPEN--ILLDKNGHIKITDFGFAKYVPDV-  157 (316)
T ss_dssp             EEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG--EEECTTSCEEECCCSSCEECSSC-
T ss_pred             eEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccCcEEccccCchh--eeEcCCCCEEEecCccceEeccc-
Confidence            4689999998887654322       3456788999999999999999999999  99999999999999999886543 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         .....||+.|||||++.+..++.++||||+||++|||++ |..||.+.+..++...+....  ...++.+++++.++
T Consensus       158 ---~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~l  231 (316)
T d1fota_         158 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA-GYTPFYDSNTMKTYEKILNAE--LRFPPFFNEDVKDL  231 (316)
T ss_dssp             ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHH
T ss_pred             ---cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHh-CCCCCCCcCHHHHHHHHHcCC--CCCCCCCCHHHHHH
Confidence               345679999999999999999999999999999999999 999999998888888886653  34567899999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      +.+||..||++|+     |++++++|.+-
T Consensus       232 i~~~L~~dp~~R~~~~r~t~~~il~Hp~f  260 (316)
T d1fota_         232 LSRLITRDLSQRLGNLQNGTEDVKNHPWF  260 (316)
T ss_dssp             HHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             HHHHhhhCHHhccccchhhHHHHHcCccc
Confidence            9999999999996     89999998653

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2.1e-39  Score=273.38  Aligned_cols=171  Identities=15%  Similarity=0.226  Sum_probs=145.5

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEc--cCCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFF--SSSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~--~~~~~kl~DFGla~~~~   70 (251)
                      |++||++.|+|.+.+....        ..++.|++.||+|||++||+||||||+|  ||++  .++.+||+|||+|+...
T Consensus       103 ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~N--ILl~~~~~~~vkL~DFGla~~~~  180 (352)
T d1koba_         103 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPEN--IMCETKKASSVKIIDFGLATKLN  180 (352)
T ss_dssp             EEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEESSTTCCCEEECCCTTCEECC
T ss_pred             EEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccc--ccccccCCCeEEEeecccceecC
Confidence            4789999999988765432        2347788899999999999999999999  8887  67899999999999865


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~  148 (251)
                      ....  .....+|+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..+....+......++  ....+++
T Consensus       181 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyellt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  257 (352)
T d1koba_         181 PDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS-GLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP  257 (352)
T ss_dssp             TTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHH-SCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCH
T ss_pred             CCCc--eeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCH
Confidence            4432  233567889999999999999999999999999999999 9999999988888888866554443  3367899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      ++.+|+.+||+.||.+|||+.++++|-+
T Consensus       258 ~~~~li~~~L~~dp~~R~s~~eil~Hp~  285 (352)
T d1koba_         258 EAKDFIKNLLQKEPRKRLTVHDALEHPW  285 (352)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence            9999999999999999999999998754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-40  Score=272.13  Aligned_cols=175  Identities=28%  Similarity=0.560  Sum_probs=147.5

Q ss_pred             CcccccchhHHHHHhcCC-----------------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCc
Q psy2787           1 MSANFAELNAFQENYTEP-----------------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSS   57 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~   57 (251)
                      |.+||++.|+|.+.+...                       ..+++.|+++||.|||+++|+||||||+|  ||++.++.
T Consensus        88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~N--IL~~~~~~  165 (309)
T d1fvra_          88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN--ILVGENYV  165 (309)
T ss_dssp             EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECGGGC
T ss_pred             EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccce--EEEcCCCc
Confidence            468999999999876432                       12346788999999999999999999999  99999999


Q ss_pred             eEEccCCCCcccCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcC
Q psy2787          58 SSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREG  137 (251)
Q Consensus        58 ~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~  137 (251)
                      +||+|||+|+.....  .......+|..|+|||.+.+..++.++|||||||++|||++++..||.+.+..++...+. .+
T Consensus       166 ~kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~-~~  242 (309)
T d1fvra_         166 AKIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QG  242 (309)
T ss_dssp             EEECCTTCEESSCEE--CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG-GT
T ss_pred             eEEcccccccccccc--ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHH-hc
Confidence            999999999864322  122345688899999999999999999999999999999994457899988888888874 56


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         138 ERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       138 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .+++.+..+++++.+|+.+||+.||++|||+.+|+++|.++.+
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         243 YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            7778888999999999999999999999999999999988753

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-39  Score=270.06  Aligned_cols=180  Identities=26%  Similarity=0.490  Sum_probs=152.8

Q ss_pred             CcccccchhHHHHHhcCC-----------------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccC
Q psy2787           1 MSANFAELNAFQENYTEP-----------------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDF   63 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-----------------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DF   63 (251)
                      |++||++.|++.+++...                 +.+++.++++||.|||+++|+||||||+|  ||++.++.+||+||
T Consensus       100 lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~N--iLld~~~~~Kl~DF  177 (308)
T d1p4oa_         100 VIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN--CMVAEDFTVKIGDF  177 (308)
T ss_dssp             EEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGG--EEECTTCCEEECCT
T ss_pred             EEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCc--eeecCCceEEEeec
Confidence            468999999888865421                 23367788899999999999999999999  99999999999999


Q ss_pred             CCCcccCCCce-eecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC
Q psy2787          64 GMMRYSQNDCY-VMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR  142 (251)
Q Consensus        64 Gla~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~  142 (251)
                      |+|+....... .......+|+.|+|||.+.+..++.++||||||+++|||++++..||.+.+..+....+. .+.+++.
T Consensus       178 Gla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~-~~~~~~~  256 (308)
T d1p4oa_         178 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM-EGGLLDK  256 (308)
T ss_dssp             TCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH-TTCCCCC
T ss_pred             ccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hCCCCCC
Confidence            99987544332 233445689999999999999999999999999999999994468999999888888775 5667777


Q ss_pred             CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHHHH
Q psy2787         143 PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPAVM  183 (251)
Q Consensus       143 ~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~~~  183 (251)
                      +..++..+.+++.+||+.+|++|||+.+|+++|+.......
T Consensus       257 p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~  297 (308)
T d1p4oa_         257 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGF  297 (308)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTH
T ss_pred             cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence            88999999999999999999999999999999988765443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-39  Score=268.40  Aligned_cols=177  Identities=24%  Similarity=0.513  Sum_probs=151.7

Q ss_pred             CcccccchhHHHHHhcCCC-------------------------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC
Q psy2787           1 MSANFAELNAFQENYTEPC-------------------------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS   55 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~-------------------------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~   55 (251)
                      |.+||++.|+|.+.+....                         ..++.|+++||+|||+++|+||||||+|  |+++.+
T Consensus       104 lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~N--Il~~~~  181 (311)
T d1t46a_         104 VITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN--ILLTHG  181 (311)
T ss_dssp             EEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEEETT
T ss_pred             EEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccc--cccccc
Confidence            4789999999988765322                         2346788899999999999999999999  999999


Q ss_pred             CceEEccCCCCcccCCC-ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHH
Q psy2787          56 SSSSSGDFGMMRYSQND-CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKID  134 (251)
Q Consensus        56 ~~~kl~DFGla~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~  134 (251)
                      +.+|++|||+++..... .........+|+.|+|||++.+..++.++|||||||++|||++.|.+||.+.+..+....+.
T Consensus       182 ~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i  261 (311)
T d1t46a_         182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMI  261 (311)
T ss_dssp             TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHH
T ss_pred             CcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999999975433 33455567889999999999999999999999999999999985677787777666666666


Q ss_pred             hcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhc
Q psy2787         135 REGERLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLT  179 (251)
Q Consensus       135 ~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~  179 (251)
                      ..+.++..+..++.++.+|+.+||+.||++|||+.+|++.|++..
T Consensus       262 ~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         262 KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence            778888888899999999999999999999999999999887654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-40  Score=274.41  Aligned_cols=170  Identities=19%  Similarity=0.242  Sum_probs=133.0

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |++||++.|+|.+.+...       ...++.|+++||.|||+ +||+||||||+|  ||++.++.+||+|||+|+.....
T Consensus        81 iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~N--ILl~~~~~vkl~DFGla~~~~~~  158 (322)
T d1s9ja_          81 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSN--ILVNSRGEIKLCDFGVSGQLIDS  158 (322)
T ss_dssp             EEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGG--EEECTTCCEEECCCCCCHHHHHH
T ss_pred             EEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHH--eeECCCCCEEEeeCCCccccCCC
Confidence            468999999988765421       23467788899999997 599999999999  99999999999999999875332


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHH---------------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQ---------------------  131 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~---------------------  131 (251)
                         ......||+.|+|||++.+..++.++||||+||++|||++ |+.||.+.+..+...                     
T Consensus       159 ---~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (322)
T d1s9ja_         159 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV-GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  234 (322)
T ss_dssp             ---TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHH-SSCCSSCCCTTHHHHHC-------------------
T ss_pred             ---ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHH-CCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccc
Confidence               2345689999999999999999999999999999999999 999997754332111                     


Q ss_pred             ---------------------HHHhcCCCCCCC-CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         132 ---------------------KIDREGERLPRP-EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       132 ---------------------~i~~~~~~~~~~-~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                           .+. ....+..+ ...+.++.+++.+||..||++|||++++++|-+-
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~  301 (322)
T d1s9ja_         235 RPLSSYGMDSRPPMAIFELLDYIV-NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI  301 (322)
T ss_dssp             -----------CCCCHHHHHHHHH-TSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             ccccccccccccchhHHHHHhhhh-ccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhh
Confidence                                 110 11111111 2367899999999999999999999999998654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3e-39  Score=272.35  Aligned_cols=168  Identities=16%  Similarity=0.184  Sum_probs=145.4

Q ss_pred             CcccccchhHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||+..|++...+..       ....++.|++.||.|||++|||||||||+|  ||++.++.+||+|||+|+..... 
T Consensus       118 ~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~N--ILl~~~g~ikL~DFG~a~~~~~~-  194 (350)
T d1rdqe_         118 MVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN--LLIDQQGYIQVTDFGFAKRVKGR-  194 (350)
T ss_dssp             EEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTSCEEECCCTTCEECSSC-
T ss_pred             cccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHH--cccCCCCCEEeeeceeeeecccc-
Confidence            45789998888876543       233467888999999999999999999999  99999999999999999986543 


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                         .....||+.|||||++.+..++.++||||+||++|||++ |..||.+.+...+...+....  +..+..+++++.++
T Consensus       195 ---~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~~~~~i~~~~--~~~p~~~s~~~~~l  268 (350)
T d1rdqe_         195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAA-GYPPFFADQPIQIYEKIVSGK--VRFPSHFSSDLKDL  268 (350)
T ss_dssp             ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHCC--CCCCTTCCHHHHHH
T ss_pred             ---cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHh-CCCCCCCcCHHHHHHHHhcCC--CCCCccCCHHHHHH
Confidence               345678999999999999999999999999999999999 999999988888888886553  34456899999999


Q ss_pred             HHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         154 MRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       154 i~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      +.+||..||.+|+     |++++++|-+-
T Consensus       269 i~~~L~~dP~kR~~~~r~t~~ell~Hp~f  297 (350)
T d1rdqe_         269 LRNLLQVDLTKRFGNLKNGVNDIKNHKWF  297 (350)
T ss_dssp             HHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             HHHHhhhCHHhccccccccHHHHHcCccc
Confidence            9999999999994     89999998664

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-38  Score=264.17  Aligned_cols=176  Identities=23%  Similarity=0.446  Sum_probs=143.4

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      +++||++.+++.+......        ..++.|++.||.|||+.+|+||||||+|  ||+++++.+||+|||+++.....
T Consensus       106 lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~N--ILl~~~~~~kL~DFG~~~~~~~~  183 (311)
T d1r0pa_         106 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARN--CMLDEKFTVKVADFGLARDMYDK  183 (311)
T ss_dssp             EEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG--EEECTTCCEEECSSGGGCCTTTT
T ss_pred             EEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHh--EeECCCCCEEEecccchhhcccc
Confidence            4689999999988665432        2356678899999999999999999999  99999999999999999875433


Q ss_pred             cee---ecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCC-CChhHHHHHHHhcCCCCCCCCCCcH
Q psy2787          73 CYV---MTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVG-LNGMQILQKIDREGERLPRPEACPV  148 (251)
Q Consensus        73 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~  148 (251)
                      ...   ......||..|+|||++....++.++||||||+++|||++ |..||.. .+..++...+ ..+.++..|..++.
T Consensus       184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t-~~~p~~~~~~~~~~~~~i-~~g~~~~~p~~~~~  261 (311)
T d1r0pa_         184 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-RGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPD  261 (311)
T ss_dssp             TCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHT-TSCCSCC------CHHHH-HTTCCCCCCTTCCH
T ss_pred             ccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHH-CCCCCCCCCCHHHHHHHH-HcCCCCCCcccCcH
Confidence            221   2234578899999999999999999999999999999999 6666644 4444555555 45677778889999


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      ++.+++.+||+.||++|||+.+|+++|+.+..
T Consensus       262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~  293 (311)
T d1r0pa_         262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFS  293 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            99999999999999999999999999988854

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-39  Score=269.88  Aligned_cols=170  Identities=16%  Similarity=0.209  Sum_probs=145.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.|+|.+++...       +..++.|++.||+|||+++|+||||||+|  ||++.++.+||+|||+++......
T Consensus        80 ivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~N--iL~~~~~~~kl~DFG~a~~~~~~~  157 (320)
T d1xjda_          80 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN--ILLDKDGHIKIADFGMCKENMLGD  157 (320)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG--EEECTTSCEEECCCTTCBCCCCTT
T ss_pred             EEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccc--eeecCCCceeccccchhhhccccc
Confidence            578999999999866432       34456788899999999999999999999  999999999999999998754332


Q ss_pred             eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVYAL  153 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l  153 (251)
                       .......||+.|+|||++.+..++.++||||+||++|||++ |+.||.+.+..++...+...  .+..|..+++++.+|
T Consensus       158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemlt-G~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dl  233 (320)
T d1xjda_         158 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI-GQSPFHGQDEEELFHSIRMD--NPFYPRWLEKEAKDL  233 (320)
T ss_dssp             -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHH
T ss_pred             -ccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHh-CCCCCCCCCHHHHHHHHHcC--CCCCCccCCHHHHHH
Confidence             23345678999999999999999999999999999999999 99999999988888888654  345567899999999


Q ss_pred             HHHHhccCCCCCCCHH-HHHHHHH
Q psy2787         154 MRQCWSKNPAERPKFS-TLKDCLY  176 (251)
Q Consensus       154 i~~cl~~dP~~Rps~~-~il~~l~  176 (251)
                      +.+||+.||++|||+. ++++|.+
T Consensus       234 i~~~L~~dP~~R~s~~~~l~~hpf  257 (320)
T d1xjda_         234 LVKLFVREPEKRLGVRGDIRQHPL  257 (320)
T ss_dssp             HHHHSCSSGGGSBTTBSCGGGSGG
T ss_pred             HHHhcccCCCCCcCHHHHHHhCch
Confidence            9999999999999995 7877644

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=5.1e-39  Score=272.28  Aligned_cols=171  Identities=10%  Similarity=0.122  Sum_probs=139.6

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.|+|.+.+...       ...++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+|+..... 
T Consensus        84 ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~N--ILl~~~g~iKl~DFGla~~~~~~-  160 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPAN--ILLDEHGHVRISDLGLACDFSKK-  160 (364)
T ss_dssp             EEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECSSSCEEECCCTTCEECSSS-
T ss_pred             EEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHCCccceeeccce--eEEcCCCcEEEeeeceeeecCCC-
Confidence            468999999998866432       23456788999999999999999999999  99999999999999999876544 


Q ss_pred             eeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHH-hcCCCCCCCCCCcHHHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKID-REGERLPRPEACPVEVY  151 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~  151 (251)
                        ......||+.|+|||++.. ..++.++||||+||++|||++ |..||.+....+...... ........+..+++++.
T Consensus       161 --~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemlt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  237 (364)
T d1omwa3         161 --KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR-GHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR  237 (364)
T ss_dssp             --CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHH-SSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHH
T ss_pred             --cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHH
Confidence              2345679999999999874 568999999999999999999 999998755433222211 13344556678999999


Q ss_pred             HHHHHHhccCCCCCCC-----HHHHHHHHHh
Q psy2787         152 ALMRQCWSKNPAERPK-----FSTLKDCLYR  177 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps-----~~~il~~l~~  177 (251)
                      ++|.+||+.||++|||     ++++++|-+-
T Consensus       238 ~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f  268 (364)
T d1omwa3         238 SLLEGLLQRDVNRRLGCLGRGAQEVKESPFF  268 (364)
T ss_dssp             HHHHHHTCSSTTTSTTTSSSTHHHHHTSGGG
T ss_pred             HHHHHHcccCHHHhCCCcccCHHHHHcCccc
Confidence            9999999999999999     6999988654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-39  Score=265.88  Aligned_cols=172  Identities=13%  Similarity=0.164  Sum_probs=145.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC----ceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS----SSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~----~~kl~DFGla~~~   69 (251)
                      |++||++.|+|.+.+...       ...++.|++.||+|||+++|+||||||+|  |+++.++    .+|++|||+|+..
T Consensus        90 iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~N--ill~~~~~~~~~vkl~DfG~a~~~  167 (293)
T d1jksa_          90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPEN--IMLLDRNVPKPRIKIIDFGLAHKI  167 (293)
T ss_dssp             EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEESCSSSSSCCEEECCCTTCEEC
T ss_pred             EEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhcceeecccccce--EEEecCCCcccceEecchhhhhhc
Confidence            478999999998865432       24457788899999999999999999999  9888776    5999999999876


Q ss_pred             CCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCc
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACP  147 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~  147 (251)
                      ....  ......+|+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..+....+.......+  .+..++
T Consensus       168 ~~~~--~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  244 (293)
T d1jksa_         168 DFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS-GASPFLGDTKQETLANVSAVNYEFEDEYFSNTS  244 (293)
T ss_dssp             TTSC--BCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred             CCCc--cccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHc-CCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCC
Confidence            5432  3345678889999999999899999999999999999999 9999999988888888765544433  236789


Q ss_pred             HHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         148 VEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       148 ~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      .++.+++.+||+.||++|||++++++|-+-
T Consensus       245 ~~~~~li~~~L~~dP~~R~s~~eil~hp~~  274 (293)
T d1jksa_         245 ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI  274 (293)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            999999999999999999999999988654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7e-39  Score=262.21  Aligned_cols=176  Identities=16%  Similarity=0.257  Sum_probs=140.2

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.++|.+.....       +..++.|++.||+|||++||+||||||+|  |+++.++..+++|||.+.......
T Consensus        88 lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~N--Ill~~~~~~~l~d~~~~~~~~~~~  165 (277)
T d1o6ya_          88 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPAN--IMISATNAVKVMDFGIARAIADSG  165 (277)
T ss_dssp             EEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEEETTSCEEECCCTTCEECC---
T ss_pred             EEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcc--cccCccccceeehhhhhhhhcccc
Confidence            468999999988755432       33567888999999999999999999999  999999999999999987643222


Q ss_pred             --eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCcHH
Q psy2787          74 --YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RPEACPVE  149 (251)
Q Consensus        74 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~  149 (251)
                        ........||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..+....+......++  ....+|++
T Consensus       166 ~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyellt-G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~  244 (277)
T d1o6ya_         166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT-GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSAD  244 (277)
T ss_dssp             -------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHH
T ss_pred             ccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHh-CCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHH
Confidence              223445678999999999999999999999999999999999 9999999888887777666555443  34678999


Q ss_pred             HHHHHHHHhccCCCCCC-CHHHHHHHHHhhc
Q psy2787         150 VYALMRQCWSKNPAERP-KFSTLKDCLYRLT  179 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rp-s~~~il~~l~~~~  179 (251)
                      +.+++.+||+.||++|| |+++++..|.++.
T Consensus       245 l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         245 LDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            99999999999999999 8999988887653

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-38  Score=265.37  Aligned_cols=172  Identities=15%  Similarity=0.262  Sum_probs=135.4

Q ss_pred             CcccccchhHHHHHhcCCC---------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc---CCceEEccCCCCcc
Q psy2787           1 MSANFAELNAFQENYTEPC---------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS---SSSSSSGDFGMMRY   68 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~---------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~---~~~~kl~DFGla~~   68 (251)
                      |++||++.|+|.+++....         ..++.|++.||+|||++||+||||||+|  ||++.   .+.+||+|||+|+.
T Consensus        86 ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~N--Ill~~~~~~~~~Kl~DFG~a~~  163 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN--LLYTSKRPNAILKLTDFGFAKE  163 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccc--cccccccccccccccccceeee
Confidence            4789999999999875432         2345667899999999999999999999  88875   45799999999987


Q ss_pred             cCCCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh----cCCCCCCC-
Q psy2787          69 SQNDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR----EGERLPRP-  143 (251)
Q Consensus        69 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~----~~~~~~~~-  143 (251)
                      .....  ......||+.|||||++.+..++.++||||+||++|+|++ |..||.+.+.......+..    .....+.+ 
T Consensus       164 ~~~~~--~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~llt-g~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~  240 (335)
T d2ozaa1         164 TTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLC-GYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE  240 (335)
T ss_dssp             CCCCC--CCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTT-SSCSCEETTCC--------CCCSCSSSCCTTH
T ss_pred             ccCCC--ccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhh-CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcc
Confidence            55432  2345678999999999999899999999999999999999 9999987665444333322    12222222 


Q ss_pred             -CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         144 -EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       144 -~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                       ..+++++.+|+.+||+.||++|||+.++++|-+-
T Consensus       241 ~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~  275 (335)
T d2ozaa1         241 WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI  275 (335)
T ss_dssp             HHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHH
T ss_pred             cccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHh
Confidence             3578899999999999999999999999998553

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.1e-38  Score=260.72  Aligned_cols=171  Identities=15%  Similarity=0.158  Sum_probs=144.8

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |++||++.++|.+.+...       +..++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+++......
T Consensus        87 ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~N--ill~~~~~~kl~DFG~a~~~~~~~  164 (277)
T d1phka_          87 LVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN--ILLDDDMNIKLTDFGFSCQLDPGE  164 (277)
T ss_dssp             EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEECTTCCEEECCCTTCEECCTTC
T ss_pred             EEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccce--EEEcCCCCeEEccchheeEccCCC
Confidence            578999999999876432       34567788899999999999999999999  999999999999999998765432


Q ss_pred             eeecCCCCcCcccCCCcccCC------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCC
Q psy2787          74 YVMTERKPLPCPWCPMESLKH------NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEA  145 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~------~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~  145 (251)
                        ......||..|+|||++.+      ..++.++||||+||++|||++ |..||.+.+.......+......++.  ..+
T Consensus       165 --~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~-g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (277)
T d1phka_         165 --KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLA-GSPPFWHRKQMLMLRMIMSGNYQFGSPEWDD  241 (277)
T ss_dssp             --CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHTCCCCCTTTGGG
T ss_pred             --ceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhcc-CCCCCCCCCHHHHHHHHHhCCCCCCCccccc
Confidence              2344678999999998863      346889999999999999999 99999999888888887766555433  357


Q ss_pred             CcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         146 CPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       146 ~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +|+++.+++.+||+.||++|||+.++++|-+
T Consensus       242 ~s~~~~~li~~~L~~~p~~R~s~~eil~h~~  272 (277)
T d1phka_         242 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPF  272 (277)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHTTSGG
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHcCHH
Confidence            9999999999999999999999999988743

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-37  Score=255.60  Aligned_cols=171  Identities=18%  Similarity=0.165  Sum_probs=138.3

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||++.+.+.......        ...++.|++.||+|||+++|+||||||+|  ||++.++.+||+|||+++.....
T Consensus        92 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~N--ILi~~~~~~kl~dfg~~~~~~~~  169 (305)
T d1blxa_          92 LVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN--ILVTSSGQIKLADFGLARIYSFQ  169 (305)
T ss_dssp             EEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTCCEEECSCCSCCCCCGG
T ss_pred             EEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccE--EEEcCCCCeeecchhhhhhhccc
Confidence            457888887665432211        23467788899999999999999999999  99999999999999999864332


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC-------------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER-------------  139 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~-------------  139 (251)
                        .......||+.|+|||++.+..++.++||||+||++|||++ |..||.+.+..+....+......             
T Consensus       170 --~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  246 (305)
T d1blxa_         170 --MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP  246 (305)
T ss_dssp             --GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSC
T ss_pred             --ccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHH-CCCCCCCCCHHHHHHHHHHhhCCCchhcccccccch
Confidence              23456788999999999999999999999999999999999 99999998877766655331000             


Q ss_pred             ------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 ------------LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 ------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                  ......+++.+.+|+.+||+.||++|||+.++++|.+
T Consensus       247 ~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpf  295 (305)
T d1blxa_         247 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY  295 (305)
T ss_dssp             GGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             hhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence                        0112457889999999999999999999999998854

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-37  Score=256.46  Aligned_cols=172  Identities=13%  Similarity=0.104  Sum_probs=137.9

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      |.+||+..+.+.......       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||+|+......
T Consensus        77 ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~N--Ili~~~~~~KL~DFG~a~~~~~~~  154 (299)
T d1ua2a_          77 LVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNN--LLLDENGVLKLADFGLAKSFGSPN  154 (299)
T ss_dssp             EEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTCCEEECCCGGGSTTTSCC
T ss_pred             ehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcce--EEecCCCccccccCccccccCCCc
Confidence            468999988887755432       23456788899999999999999999999  999999999999999998754432


Q ss_pred             eeecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC------------
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL------------  140 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~------------  140 (251)
                      . ......+|+.|+|||++.+. .++.++||||+||++|||++ |..||.+.+..+....+...-..+            
T Consensus       155 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~-g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~  232 (299)
T d1ua2a_         155 R-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP  232 (299)
T ss_dssp             C-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSST
T ss_pred             c-cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHh-CcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccc
Confidence            2 23445789999999998754 57999999999999999999 999999988877766654310000            


Q ss_pred             ---------CC-----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         141 ---------PR-----PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       141 ---------~~-----~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                               ..     ...+++++.+|+.+||+.||++|||++++++|-+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~  282 (299)
T d1ua2a_         233 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKY  282 (299)
T ss_dssp             TCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred             hhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHh
Confidence                     00     1356789999999999999999999999998754

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-37  Score=259.20  Aligned_cols=172  Identities=16%  Similarity=0.184  Sum_probs=145.0

Q ss_pred             CcccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc--CCceEEccCCCCcccC
Q psy2787           1 MSANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS--SSSSSSGDFGMMRYSQ   70 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~--~~~~kl~DFGla~~~~   70 (251)
                      |.+||++.++|.+++....        ..++.|++.||+|||++||+||||||+|  |+++.  ...+||+|||+++...
T Consensus        78 lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~N--Ill~~~~~~~ikl~DFG~~~~~~  155 (321)
T d1tkia_          78 MIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPEN--IIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             EEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEESSSSCCCEEECCCTTCEECC
T ss_pred             EEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccc--eeecCCCceEEEEcccchhhccc
Confidence            5789999999999876432        2346788899999999999999999999  88874  4589999999998754


Q ss_pred             CCceeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCC--CCCCcH
Q psy2787          71 NDCYVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPR--PEACPV  148 (251)
Q Consensus        71 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~  148 (251)
                      ....  .....+|+.|+|||.+.+..++.++||||+||++|+|++ |..||.+.+..++...+......++.  ...++.
T Consensus       156 ~~~~--~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  232 (321)
T d1tkia_         156 PGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLS-GINPFLAETNQQIIENIMNAEYTFDEEAFKEISI  232 (321)
T ss_dssp             TTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHH-SSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCH
T ss_pred             cCCc--ccccccccccccchhccCCCCCchhhcccHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCH
Confidence            4322  233567888999999999999999999999999999999 99999999988888888766554432  246899


Q ss_pred             HHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         149 EVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       149 ~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                      ++.+++.+||..||++|||+.++++|-+-
T Consensus       233 ~~~~li~~~L~~dp~~R~s~~eil~hp~~  261 (321)
T d1tkia_         233 EAMDFVDRLLVKERKSRMTASEALQHPWL  261 (321)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhcCHhh
Confidence            99999999999999999999999998654

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-37  Score=253.83  Aligned_cols=178  Identities=15%  Similarity=0.205  Sum_probs=134.9

Q ss_pred             CcccccchhHHHHHhcCCC------CCCCchhhHHhhhhhh--------CCcccCCCCCCCceEEEccCCceEEccCCCC
Q psy2787           1 MSANFAELNAFQENYTEPC------RKPLPPERRGYGTFSV--------NNICSCQFSSSSLLILFFSSSSSSSGDFGMM   66 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~~------~~~~~~~~~gl~~lH~--------~~iiHrdlkp~ni~il~~~~~~~kl~DFGla   66 (251)
                      |.+||++.|+|.+.+....      ..+..+++.||+|+|+        +||+||||||+|  ||++.++.+||+|||++
T Consensus        78 lv~Ey~~~g~L~~~l~~~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~N--ILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          78 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN--ILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGG--EEECTTSCEEECCCTTC
T ss_pred             EEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccc--eEEcCCCCeEEEecCcc
Confidence            4689999999998776432      2456677899999996        599999999999  99999999999999999


Q ss_pred             cccCCCce---eecCCCCcCcccCCCcccCCCC------CCchhHHHHHHHHHHHHHhCCCCCCCC--------------
Q psy2787          67 RYSQNDCY---VMTERKPLPCPWCPMESLKHNQ------FSQASDAWMFGVTIWEMFTFGAEPWVG--------------  123 (251)
Q Consensus        67 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~------~~~~~Di~S~G~il~el~~~g~~pf~~--------------  123 (251)
                      +.......   .......||+.|+|||++.+..      ++.++|||||||++|||++ |..||..              
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~t-g~~~~~~~~~~~~~~~~~~~~  234 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIAR-RCSIGGIHEDYQLPYYDLVPS  234 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHH-TBCBTTBCCCCCCTTTTTSCS
T ss_pred             ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhh-CCCCCCcccccccchhhcccc
Confidence            87543221   1234567899999999987542      5678999999999999999 8877632              


Q ss_pred             -CChhHHHHHHHhcCCCCCCCCC-----CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcHH
Q psy2787         124 -LNGMQILQKIDREGERLPRPEA-----CPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTPA  181 (251)
Q Consensus       124 -~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~~  181 (251)
                       .....+...+...+.++..+..     .+..+.+++.+||+.||++|||+.+|++.|..+...
T Consensus       235 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         235 DPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             SCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence             1223344444444544444322     335688999999999999999999999999887644

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-36  Score=246.79  Aligned_cols=161  Identities=16%  Similarity=0.240  Sum_probs=128.5

Q ss_pred             cccccch-hHHHHHhcC-------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccC-CceEEccCCCCcccCCC
Q psy2787           2 SANFAEL-NAFQENYTE-------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSS-SSSSSGDFGMMRYSQND   72 (251)
Q Consensus         2 ~~e~~~l-~~l~~~~~~-------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~-~~~kl~DFGla~~~~~~   72 (251)
                      .+||+.. +++.+....       ....++.|++.||+|||++||+||||||+|  |+++.+ +.+||+|||+|+.....
T Consensus        87 v~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~N--Ill~~~~~~vkl~DFG~a~~~~~~  164 (273)
T d1xwsa_          87 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDEN--ILIDLNRGELKLIDFGSGALLKDT  164 (273)
T ss_dssp             EEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG--EEEETTTTEEEECCCTTCEECCSS
T ss_pred             EEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccc--eEEecCCCeEEECccccceecccc
Confidence            5677754 455544321       234567888999999999999999999999  999854 79999999999875443


Q ss_pred             ceeecCCCCcCcccCCCcccCCCCC-CchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCCCCCCCcHHHH
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQF-SQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLPRPEACPVEVY  151 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  151 (251)
                         ......||+.|+|||++.+..+ +.++||||+||++|||++ |..||.+..      .+...  ....+..+|+++.
T Consensus       165 ---~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~-g~~Pf~~~~------~i~~~--~~~~~~~~s~~~~  232 (273)
T d1xwsa_         165 ---VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC-GDIPFEHDE------EIIRG--QVFFRQRVSSECQ  232 (273)
T ss_dssp             ---CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH-SSCSCCSHH------HHHHC--CCCCSSCCCHHHH
T ss_pred             ---cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhh-CCCCCCCch------HHhhc--ccCCCCCCCHHHH
Confidence               3345678999999999987665 577999999999999999 999997632      22233  2344567999999


Q ss_pred             HHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         152 ALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       152 ~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                      +++.+||+.||++|||++++++|.+
T Consensus       233 ~li~~~L~~dp~~R~s~~eil~hp~  257 (273)
T d1xwsa_         233 HLIRWCLALRPSDRPTFEEIQNHPW  257 (273)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHccCCHhHCcCHHHHhcCHh
Confidence            9999999999999999999999854

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.6e-35  Score=244.63  Aligned_cols=157  Identities=15%  Similarity=0.165  Sum_probs=121.1

Q ss_pred             CCCchhhHHhhhhhhCCcccCCCCCCCceEEEc---cCCceEEccCCCCcccCCCc------eeecCCCCcCcccCCCcc
Q psy2787          21 KPLPPERRGYGTFSVNNICSCQFSSSSLLILFF---SSSSSSSGDFGMMRYSQNDC------YVMTERKPLPCPWCPMES   91 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~---~~~~~kl~DFGla~~~~~~~------~~~~~~~~~~~~y~aPE~   91 (251)
                      .++.|++.||+|||++||+||||||+|  |+++   .+..+|++|||+|+......      ........||+.|||||+
T Consensus       107 ~~~~qi~~~l~~lH~~~iiHrDiKp~N--Il~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~  184 (299)
T d1ckia_         107 LLADQMISRIEYIHSKNFIHRDVKPDN--FLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINT  184 (299)
T ss_dssp             HHHHHHHHHHHHHHHTTEECSCCCGGG--EEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHH
T ss_pred             HHHHHHHHHHHHHHHCCeeeccCCHhh--ccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHH
Confidence            345678899999999999999999999  7654   45679999999999854432      123345679999999999


Q ss_pred             cCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHH---HhcCCCC---CCCCCCcHHHHHHHHHHhccCCCCC
Q psy2787          92 LKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKI---DREGERL---PRPEACPVEVYALMRQCWSKNPAER  165 (251)
Q Consensus        92 ~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i---~~~~~~~---~~~~~~~~~~~~li~~cl~~dP~~R  165 (251)
                      +.+..++.++|||||||++|||++ |..||.+.........+   .......   .....+|+++.+++.+||+.+|++|
T Consensus       185 ~~~~~~~~~~DiwSlG~~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~R  263 (299)
T d1ckia_         185 HLGIEQSRRDDLESLGYVLMYFNL-GSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDK  263 (299)
T ss_dssp             HTTBCCCHHHHHHHHHHHHHHHHH-SSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCC
T ss_pred             HhCCCCCChhhEEecCHHHHHHHh-CCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHC
Confidence            999999999999999999999999 99999876543322221   1111111   1235789999999999999999999


Q ss_pred             CCHHHHHHHHHhhcH
Q psy2787         166 PKFSTLKDCLYRLTP  180 (251)
Q Consensus       166 ps~~~il~~l~~~~~  180 (251)
                      |++.++.+.|+.+..
T Consensus       264 P~~~~i~~~l~~~~~  278 (299)
T d1ckia_         264 PDYSYLRQLFRNLFH  278 (299)
T ss_dssp             CCHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHH
Confidence            999999888776543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-35  Score=242.72  Aligned_cols=172  Identities=15%  Similarity=0.121  Sum_probs=133.3

Q ss_pred             CcccccchhHHHHHhcCC--------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCC
Q psy2787           1 MSANFAELNAFQENYTEP--------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQND   72 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~--------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~   72 (251)
                      |.+||+..+.+.......        ...++.|++.||+|||++|||||||||+|  |+++.++.+||+|||+|+.....
T Consensus        78 iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeN--Il~~~~~~~kl~DFG~a~~~~~~  155 (298)
T d1gz8a_          78 LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQN--LLINTEGAIKLADFGLARAFGVP  155 (298)
T ss_dssp             EEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTSCEEECSTTHHHHHCCC
T ss_pred             EEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchh--eeecccCcceeccCCcceeccCC
Confidence            457888766444332221        23457788899999999999999999999  99999999999999999875443


Q ss_pred             ceeecCCCCcCcccCCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCC-----------
Q psy2787          73 CYVMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERL-----------  140 (251)
Q Consensus        73 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~-----------  140 (251)
                      . .......||+.|+|||++.... ++.++||||+||++|+|++ |+.||.+.+..+....+......+           
T Consensus       156 ~-~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  233 (298)
T d1gz8a_         156 V-RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT-RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSM  233 (298)
T ss_dssp             S-BCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred             c-ccceeecccceeeehhhhccccCCCccccccccchhhhHHhh-CCCCCCCCCHHHHHHHHHHhcCCCchhhccccccc
Confidence            2 2344567899999999877655 5789999999999999999 999999887766555443210000           


Q ss_pred             -----CC-----------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         141 -----PR-----------PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       141 -----~~-----------~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                           ..           ...++.++.+++.+||..||++|||++++++|-+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~f  285 (298)
T d1gz8a_         234 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF  285 (298)
T ss_dssp             TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             cccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHh
Confidence                 00           1356789999999999999999999999998843

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-36  Score=248.21  Aligned_cols=174  Identities=16%  Similarity=0.191  Sum_probs=138.1

Q ss_pred             CcccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc
Q psy2787           1 MSANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC   73 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~   73 (251)
                      +.+||+..++|.+.....       ...++.|++.||+|||+++|+||||||+|  |+++.++.+||+|||+++......
T Consensus       106 ~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~N--ill~~~~~vkL~DFG~a~~~~~~~  183 (322)
T d1vzoa_         106 LILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLEN--ILLDSNGHVVLTDFGLSKEFVADE  183 (322)
T ss_dssp             EEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTSCEEESCSSEEEECCGGG
T ss_pred             eeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccc--eeecCCCCEEEeeccchhhhcccc
Confidence            457899999888765432       23357788999999999999999999999  999999999999999998765544


Q ss_pred             eeecCCCCcCcccCCCcccCCC--CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHh--cCCCCCCCCCCcHH
Q psy2787          74 YVMTERKPLPCPWCPMESLKHN--QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDR--EGERLPRPEACPVE  149 (251)
Q Consensus        74 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~  149 (251)
                      ........|++.|++||.+.+.  .++.++||||+||++|||++ |..||.+....+....+..  ....++.+..++++
T Consensus       184 ~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyellt-G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  262 (322)
T d1vzoa_         184 TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT-GASPFTVDGEKNSQAEISRRILKSEPPYPQEMSAL  262 (322)
T ss_dssp             GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH-SSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHH
T ss_pred             cccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHH
Confidence            4445567888999999998764  36789999999999999999 9999987654333222221  12344556789999


Q ss_pred             HHHHHHHHhccCCCCCC-----CHHHHHHHHHh
Q psy2787         150 VYALMRQCWSKNPAERP-----KFSTLKDCLYR  177 (251)
Q Consensus       150 ~~~li~~cl~~dP~~Rp-----s~~~il~~l~~  177 (251)
                      +.+++.+||+.||++||     |++++++|.+-
T Consensus       263 ~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff  295 (322)
T d1vzoa_         263 AKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  295 (322)
T ss_dssp             HHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             HHHHHHHHcccCHHHcCCCCcccHHHHHcCHhh
Confidence            99999999999999999     47899887553

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-35  Score=245.28  Aligned_cols=171  Identities=13%  Similarity=0.142  Sum_probs=131.7

Q ss_pred             CcccccchhHHHH---HhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCccc
Q psy2787           1 MSANFAELNAFQE---NYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYS   69 (251)
Q Consensus         1 ~~~e~~~l~~l~~---~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~   69 (251)
                      |.+||++.+.+..   .....       ...++.|++.||+|||++||+||||||+|  ||++.++ .+||+|||+++..
T Consensus        96 lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~N--ILl~~~~~~~kl~DFG~a~~~  173 (350)
T d1q5ka_          96 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQN--LLLDPDTAVLKLCDFGSAKQL  173 (350)
T ss_dssp             EEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG--EEECTTTCCEEECCCTTCEEC
T ss_pred             EEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcce--EEEecCCCceeEecccchhhc
Confidence            4679998663322   22211       23457789999999999999999999999  9998775 8999999999875


Q ss_pred             CCCceeecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc------------
Q psy2787          70 QNDCYVMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE------------  136 (251)
Q Consensus        70 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~------------  136 (251)
                      ....  ......|+..|+|||.+.+ ..++.++||||+||++|||++ |..||.+.+..+....+...            
T Consensus       174 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~-g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~  250 (350)
T d1q5ka_         174 VRGE--PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL-GQPIFPGDSGVDQLVEIIKVLGTPTREQIREM  250 (350)
T ss_dssp             CTTS--CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH-TSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             cCCc--ccccccccccccChHHhhcccCCCcceeecccceEEEehhh-CCCCCCCCCHHHHHHHHHHHhCCChHHhhhhh
Confidence            4432  2334578888999998765 468999999999999999999 99999888766655544321            


Q ss_pred             -----CCCC----------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         137 -----GERL----------PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       137 -----~~~~----------~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                           ....          .....+++++.+|+.+||..||++|||+.++++|-+
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~  305 (350)
T d1q5ka_         251 NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSF  305 (350)
T ss_dssp             CC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             ccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence                 0000          012457889999999999999999999999998854

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=241.59  Aligned_cols=173  Identities=15%  Similarity=0.097  Sum_probs=132.2

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+..+.+.......       ...++.|++.||+|||++||+||||||+|  ||++.++.+||+|||+++.......
T Consensus        95 v~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~N--ILl~~~~~~kl~dfg~~~~~~~~~~  172 (318)
T d3blha1          95 VFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAAN--VLITRDGVLKLADFGLARAFSLAKN  172 (318)
T ss_dssp             EEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTSCEEECCCTTCEECCC---
T ss_pred             EEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchh--eeecCCCcEEeeecceeeecccccc
Confidence            56788766665433321       23356788999999999999999999999  9999999999999999987543221


Q ss_pred             ---eecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--CC-----
Q psy2787          75 ---VMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--RP-----  143 (251)
Q Consensus        75 ---~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~-----  143 (251)
                         .......||+.|+|||++.+. .++.++||||+||++|||++ |+.||.+.+..+....+......+.  ..     
T Consensus       173 ~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  251 (318)
T d3blha1         173 SQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDN  251 (318)
T ss_dssp             --CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCC
T ss_pred             cccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhh-CCCCCCCCCHHHHHHHHHHhcCCCChhhccccch
Confidence               123345789999999998765 68899999999999999999 9999998877666555433111110  00     


Q ss_pred             -----------------------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         144 -----------------------EACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       144 -----------------------~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                             ...++.+.+|+.+||+.||++|||++++++|-+-
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hpff  308 (318)
T d3blha1         252 YELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF  308 (318)
T ss_dssp             C-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             hhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcChhh
Confidence                                   0125577899999999999999999999998764

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=1.1e-34  Score=238.94  Aligned_cols=175  Identities=13%  Similarity=0.188  Sum_probs=132.2

Q ss_pred             cccccchhHHHHHhcCCC--------CCCCchhhHHhhhhhhCCcccCCCCCCCceEEEcc-----CCceEEccCCCCcc
Q psy2787           2 SANFAELNAFQENYTEPC--------RKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFS-----SSSSSSGDFGMMRY   68 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~--------~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~-----~~~~kl~DFGla~~   68 (251)
                      .+||+. ++|.+......        ..++.|++.||+|||++||+||||||+|  |+++.     .+.+||+|||+|+.
T Consensus        79 vme~~~-~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~N--ili~~~~~~~~~~vkl~DFG~a~~  155 (293)
T d1csna_          79 VIDLLG-PSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDN--FLIGRPNSKNANMIYVVDFGMVKF  155 (293)
T ss_dssp             EEECCC-CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGG--EEECCSSSTTTTCEEECCCTTCEE
T ss_pred             EEEecC-CCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccc--eeecCcccccCCceEEcccceeEE
Confidence            567773 55555443221        2346677799999999999999999999  88864     56899999999997


Q ss_pred             cCCCc------eeecCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCh---hHHHHHHHhcCCC
Q psy2787          69 SQNDC------YVMTERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNG---MQILQKIDREGER  139 (251)
Q Consensus        69 ~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~---~~~~~~i~~~~~~  139 (251)
                      .....      ........||+.|||||++.+..++.++|||||||++|||++ |..||.+...   ......+......
T Consensus       156 ~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~ellt-g~~Pf~~~~~~~~~~~~~~i~~~~~~  234 (293)
T d1csna_         156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLR-GSLPWQGLKAATNKQKYERIGEKKQS  234 (293)
T ss_dssp             SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHH-SSCTTSSCCSCCHHHHHHHHHHHHHH
T ss_pred             cccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHh-CCCcCCCccchhHHHHHHHHHhccCC
Confidence            54321      112345679999999999999999999999999999999999 9999976533   2233333222111


Q ss_pred             C---CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhhcH
Q psy2787         140 L---PRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRLTP  180 (251)
Q Consensus       140 ~---~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~~~  180 (251)
                      .   .....+|+++.+++..|+..+|++||+++.+.+.|.++..
T Consensus       235 ~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~  278 (293)
T d1csna_         235 TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE  278 (293)
T ss_dssp             SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred             CChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHH
Confidence            1   1235688999999999999999999999998888776643

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=7.1e-35  Score=239.27  Aligned_cols=171  Identities=13%  Similarity=0.106  Sum_probs=129.7

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+||+..+.+.......       ...++.|++.||+|||+++|+||||||+|  |+++.++.+|++|||+|........
T Consensus        78 ~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~N--Ill~~~~~~kl~DfG~a~~~~~~~~  155 (286)
T d1ob3a_          78 VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQN--LLINREGELKIADFGLARAFGIPVR  155 (286)
T ss_dssp             EEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTSCEEECCTTHHHHHCC---
T ss_pred             EEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCce--eeEcCCCCEEecccccceecccCcc
Confidence            46677766655544322       23467788899999999999999999999  9999999999999999987544322


Q ss_pred             eecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC--------------
Q psy2787          75 VMTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER--------------  139 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~--------------  139 (251)
                       ......+++.|+|||.+.+. .++.++||||+||++|||++ |+.||.+.+..+....+......              
T Consensus       156 -~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  233 (286)
T d1ob3a_         156 -KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN-GTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPK  233 (286)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             -ccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHH-CCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhh
Confidence             23344678889999998754 46899999999999999999 99999988776665554321000              


Q ss_pred             -------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 -------------LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 -------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                   ......+++++.+++.+||+.||++|||++++++|-+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~  283 (286)
T d1ob3a_         234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAY  283 (286)
T ss_dssp             CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGG
T ss_pred             cccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence                         0112457889999999999999999999999998744

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=243.27  Aligned_cols=171  Identities=15%  Similarity=0.135  Sum_probs=131.9

Q ss_pred             ccccchhHHHHHhcC------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCc--e
Q psy2787           3 ANFAELNAFQENYTE------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDC--Y   74 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~--~   74 (251)
                      +||+..++|.+.+..      ....++.|++.||+|||++|||||||||+|  ||++.++.+||+|||+|+......  .
T Consensus        89 ~~~~~~g~L~~~l~~~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~N--ILl~~~~~~kl~DfG~a~~~~~~~~~~  166 (345)
T d1pmea_          89 VTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSN--LLLNTTCDLKICDFGLARVADPDHDHT  166 (345)
T ss_dssp             EEECCCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCTTCEECCGGGCBC
T ss_pred             EEeecCCchhhhhhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcce--EEECCCCCEEEcccCceeeccCCCccc
Confidence            356667777776542      123467788899999999999999999999  999999999999999998743322  1


Q ss_pred             eecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhc-----------------
Q psy2787          75 VMTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDRE-----------------  136 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~-----------------  136 (251)
                      .......||+.|+|||++.. ..++.++||||+||++|+|++ |..||.+.+..+........                 
T Consensus       167 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (345)
T d1pmea_         167 GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA  245 (345)
T ss_dssp             CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHH
T ss_pred             eeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhh-CCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhh
Confidence            22345678999999999854 567899999999999999999 99999887655444333211                 


Q ss_pred             -------CCCCC-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         137 -------GERLP-----RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       137 -------~~~~~-----~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                             .....     ....++.++.+++.+||..||++|||+.++++|-+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf  297 (345)
T d1pmea_         246 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY  297 (345)
T ss_dssp             HHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             hcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence                   00000     12457789999999999999999999999998854

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=236.92  Aligned_cols=167  Identities=13%  Similarity=0.155  Sum_probs=130.6

Q ss_pred             cccccchhHHHHHhcC------CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCcee
Q psy2787           2 SANFAELNAFQENYTE------PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~------~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~   75 (251)
                      .+||+. .+|......      ....++.|++.||+|||++||+||||||+|  ||++.++.+|++|||+|+.....   
T Consensus       101 v~e~~~-~~l~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~N--IL~~~~~~~kl~Dfg~a~~~~~~---  174 (346)
T d1cm8a_         101 VMPFMG-TDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN--LAVNEDCELKILDFGLARQADSE---  174 (346)
T ss_dssp             EEECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGG--EEECTTCCEEECCCTTCEECCSS---
T ss_pred             EEeccc-ccHHHHHHhccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcch--hhcccccccccccccceeccCCc---
Confidence            567773 334333221      234567888999999999999999999999  99999999999999999876543   


Q ss_pred             ecCCCCcCcccCCCcccCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCC---------------
Q psy2787          76 MTERKPLPCPWCPMESLKH-NQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGER---------------  139 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~---------------  139 (251)
                       .....+|+.|+|||++.+ ..++.++||||+||++|+|++ |..||.+.+.......+......               
T Consensus       175 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~-g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (346)
T d1cm8a_         175 -MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMIT-GKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAK  252 (346)
T ss_dssp             -CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHH
T ss_pred             -cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHH-CcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhh
Confidence             345678889999999876 456899999999999999999 99999887765544433221000               


Q ss_pred             --------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 --------------LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 --------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                    ......+++++.+|+.+||..||++|||+.++++|-+
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~  303 (346)
T d1cm8a_         253 NYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPY  303 (346)
T ss_dssp             HHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred             hhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChh
Confidence                          0122467889999999999999999999999999854

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.98  E-value=1e-33  Score=236.69  Aligned_cols=171  Identities=11%  Similarity=0.111  Sum_probs=130.5

Q ss_pred             CcccccchhHHHHHhcC----CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCC-ceEEccCCCCcccCCCcee
Q psy2787           1 MSANFAELNAFQENYTE----PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSS-SSSSGDFGMMRYSQNDCYV   75 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~----~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~-~~kl~DFGla~~~~~~~~~   75 (251)
                      |.+||++.++|......    ....++.|++.||+|||++||+||||||+|  ||++.++ .+||+|||+|+......  
T Consensus       109 ~v~e~~~~~~L~~~~~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~N--ILi~~~~~~vkl~DFG~a~~~~~~~--  184 (328)
T d3bqca1         109 LVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN--VMIDHEHRKLRLIDWGLAEFYHPGQ--  184 (328)
T ss_dssp             EEEECCCSCBGGGTTTSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEEETTTTEEEECCGGGCEECCTTC--
T ss_pred             EEEeecCCCcHHHHhcCCCHHHHHHHHHHHHHHHHHHhhcccccccccccc--eEEcCCCCeeeecccccceeccCCC--
Confidence            35799999988775432    234578888999999999999999999999  9998655 69999999998755432  


Q ss_pred             ecCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCCh-hHHHHHHHh-------------cCC--
Q psy2787          76 MTERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNG-MQILQKIDR-------------EGE--  138 (251)
Q Consensus        76 ~~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~-~~~~~~i~~-------------~~~--  138 (251)
                      ......+|..|+|||.+.+. .++.++||||+||++|||++ |..||..... .+....+..             ...  
T Consensus       185 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~-g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~  263 (328)
T d3bqca1         185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF-RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIEL  263 (328)
T ss_dssp             CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHH-TCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCC
T ss_pred             cccccccCccccCcccccCCCCCCcccchhhhhhhhHHhcc-CCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhccccc
Confidence            23456788899999998765 47999999999999999999 9999965432 221111110             000  


Q ss_pred             --------------------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         139 --------------------RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       139 --------------------~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                          .......+++++.+||.+||..||++|||++++++|-+
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~  321 (328)
T d3bqca1         264 DPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY  321 (328)
T ss_dssp             CGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             CcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence                                00111347789999999999999999999999998765

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.7e-33  Score=237.00  Aligned_cols=168  Identities=14%  Similarity=0.099  Sum_probs=130.9

Q ss_pred             ccccchhHHHHHhcCC------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           3 ANFAELNAFQENYTEP------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         3 ~e~~~l~~l~~~~~~~------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      +||+..++|.+.+...      ...++.|++.||+|||++||+||||||+|  |+++.++.+|++|||++......    
T Consensus       101 ~~~~~gg~L~~~~~~~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~N--ILi~~~~~~kl~dfg~a~~~~~~----  174 (348)
T d2gfsa1         101 VTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCELKILDFGLARHTDDE----  174 (348)
T ss_dssp             EEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG--EEECTTCCEEECCC----CCTGG----
T ss_pred             EEeecCCchhhhcccccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcc--ccccccccccccccchhcccCcc----
Confidence            5677788888766432      23457788899999999999999999999  99999999999999999764432    


Q ss_pred             cCCCCcCcccCCCcccCCC-CCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCCCCC--------------
Q psy2787          77 TERKPLPCPWCPMESLKHN-QFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGERLP--------------  141 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~~-~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~~~~--------------  141 (251)
                      .....|+..|+|||++.+. .++.++||||+||++|+|++ |..||.+.+.......+........              
T Consensus       175 ~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~-g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~  253 (348)
T d2gfsa1         175 MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT-GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARN  253 (348)
T ss_dssp             GSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHH-SSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHH
T ss_pred             cccccccccccCchhhcCCccCCcccchhhhhHHHHHHHh-CCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhh
Confidence            3456788899999987665 46889999999999999999 9999998877666555533211110              


Q ss_pred             ---------------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         142 ---------------RPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       142 ---------------~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                     ....+++++.+||.+||..||++|||+.++++|-+-
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f  304 (348)
T d2gfsa1         254 YIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYF  304 (348)
T ss_dssp             HHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             hhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhh
Confidence                           013578899999999999999999999999998653

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.9e-32  Score=222.65  Aligned_cols=171  Identities=15%  Similarity=0.135  Sum_probs=128.6

Q ss_pred             cccccchhHHHHHhcCC-------CCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCce
Q psy2787           2 SANFAELNAFQENYTEP-------CRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCY   74 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~-------~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~   74 (251)
                      .+|+...+++.......       ...++.|++.||+|||++||+||||||+|  |+++.++.+||+|||.|+.......
T Consensus        79 v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~N--Ili~~~~~~kl~DFG~a~~~~~~~~  156 (292)
T d1unla_          79 VFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQN--LLINRNGELKLANFGLARAFGIPVR  156 (292)
T ss_dssp             EEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG--EEECTTCCEEECCCTTCEECCSCCS
T ss_pred             EeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcc--cccccCCceeeeecchhhcccCCCc
Confidence            35666666655543322       23456777899999999999999999999  9999999999999999987544322


Q ss_pred             eecCCCCcCcccCCCcccCCCC-CCchhHHHHHHHHHHHHHhCCCCCC-CCCChhHHHHHHHhcCCC-------------
Q psy2787          75 VMTERKPLPCPWCPMESLKHNQ-FSQASDAWMFGVTIWEMFTFGAEPW-VGLNGMQILQKIDREGER-------------  139 (251)
Q Consensus        75 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~S~G~il~el~~~g~~pf-~~~~~~~~~~~i~~~~~~-------------  139 (251)
                       ......++..|+|||++.+.. ++.++||||+||++|||++ |..|| .+.+..+....+......             
T Consensus       157 -~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (292)
T d1unla_         157 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN-AGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP  234 (292)
T ss_dssp             -CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTT-TSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred             -cceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhh-CCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcc
Confidence             233445677899999987655 6899999999999999999 88875 455555555544321100             


Q ss_pred             --------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q psy2787         140 --------------LPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLY  176 (251)
Q Consensus       140 --------------~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~  176 (251)
                                    .......++.+.+|+.+||+.||.+|||++++++|-+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~  285 (292)
T d1unla_         235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPY  285 (292)
T ss_dssp             TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGG
T ss_pred             cccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChh
Confidence                          0112456789999999999999999999999998754

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.1e-33  Score=236.12  Aligned_cols=173  Identities=16%  Similarity=0.135  Sum_probs=125.5

Q ss_pred             CcccccchhHHHHHhcC----CCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceee
Q psy2787           1 MSANFAELNAFQENYTE----PCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVM   76 (251)
Q Consensus         1 ~~~e~~~l~~l~~~~~~----~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~   76 (251)
                      +.+||+..+.+......    ....++.|++.||+|||++||+||||||+|  |+++.++.+|++|||+++......  .
T Consensus        99 iv~Ey~~~~l~~~~~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~N--il~~~~~~~kl~df~~~~~~~~~~--~  174 (355)
T d2b1pa1          99 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN--IVVKSDCTLKILDFGLARTAGTSF--M  174 (355)
T ss_dssp             EEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG--EEECTTCCEEECCCCC-----------
T ss_pred             EEEeccchHHHHhhhcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccc--cccccccceeeechhhhhcccccc--c
Confidence            36788876554443221    234467788899999999999999999999  999999999999999988744332  3


Q ss_pred             cCCCCcCcccCCCcccCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChhHHHHHHHhcCC------------------
Q psy2787          77 TERKPLPCPWCPMESLKHNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGMQILQKIDREGE------------------  138 (251)
Q Consensus        77 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~~~~~~i~~~~~------------------  138 (251)
                      .....+|..|+|||++.+..++.++||||+||++|+|++ |..||.+.+.......+.....                  
T Consensus       175 ~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~-g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~  253 (355)
T d2b1pa1         175 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVR-HKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYV  253 (355)
T ss_dssp             ------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHH-SSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHH
T ss_pred             cccccccccccChhhhcCCCCCCCcccccccchHHHHhh-CCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHh
Confidence            344567889999999999999999999999999999999 9999988776555444322100                  


Q ss_pred             ----CCCC------------------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHhh
Q psy2787         139 ----RLPR------------------PEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYRL  178 (251)
Q Consensus       139 ----~~~~------------------~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~~  178 (251)
                          ....                  ....++++.+|+.+||..||++|||++++++|-+--
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~  315 (355)
T d2b1pa1         254 ENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN  315 (355)
T ss_dssp             HTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTG
T ss_pred             hcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccC
Confidence                0000                  011356789999999999999999999999996543

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=8.4e-30  Score=215.26  Aligned_cols=150  Identities=15%  Similarity=0.166  Sum_probs=112.1

Q ss_pred             CCCchhhHHhhhhhh-CCcccCCCCCCCceEEEccCC------ceEEccCCCCcccCCCceeecCCCCcCcccCCCcccC
Q psy2787          21 KPLPPERRGYGTFSV-NNICSCQFSSSSLLILFFSSS------SSSSGDFGMMRYSQNDCYVMTERKPLPCPWCPMESLK   93 (251)
Q Consensus        21 ~~~~~~~~gl~~lH~-~~iiHrdlkp~ni~il~~~~~------~~kl~DFGla~~~~~~~~~~~~~~~~~~~y~aPE~~~   93 (251)
                      .++.|+++||+|||+ .||+||||||+|  |+++.++      .+|++|||.+......    .....+|+.|+|||++.
T Consensus       129 ~i~~qil~al~~lh~~~~IvHrDlKp~N--Ill~~~~~~~~~~~~kl~dfg~s~~~~~~----~~~~~gt~~y~aPE~~~  202 (362)
T d1q8ya_         129 QISKQLLLGLDYMHRRCGIIHTDIKPEN--VLMEIVDSPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLL  202 (362)
T ss_dssp             HHHHHHHHHHHHHHHTTCEECSCCSGGG--EEEEEEETTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCcccccCChhH--eeeeccCcccccceeeEeecccccccccc----cccccccccccChhhcc
Confidence            467788999999998 899999999999  7776554      3899999999864432    34567899999999999


Q ss_pred             CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCChh------H-HHHHHHhcCC----------------------------
Q psy2787          94 HNQFSQASDAWMFGVTIWEMFTFGAEPWVGLNGM------Q-ILQKIDREGE----------------------------  138 (251)
Q Consensus        94 ~~~~~~~~Di~S~G~il~el~~~g~~pf~~~~~~------~-~~~~i~~~~~----------------------------  138 (251)
                      +..++.++||||+||++++|++ |+.||......      + +...+..-+.                            
T Consensus       203 ~~~~~~~~DiwSlG~il~el~~-g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (362)
T d1q8ya_         203 GAPWGCGADIWSTACLIFELIT-GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKL  281 (362)
T ss_dssp             TCCCCTHHHHHHHHHHHHHHHH-SSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCC
T ss_pred             ccCCCccccccchHHHHHHHHH-CCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccc
Confidence            9999999999999999999999 99999653221      1 1111000000                            


Q ss_pred             -----------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHh
Q psy2787         139 -----------RLPRPEACPVEVYALMRQCWSKNPAERPKFSTLKDCLYR  177 (251)
Q Consensus       139 -----------~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~il~~l~~  177 (251)
                                 ....+...++++.+|+.+||..||.+|||++++++|-+-
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f  331 (362)
T d1q8ya_         282 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL  331 (362)
T ss_dssp             CBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGG
T ss_pred             cCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCccc
Confidence                       001112345679999999999999999999999988643

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.37  E-value=2.2e-14  Score=109.28  Aligned_cols=101  Identities=9%  Similarity=-0.029  Sum_probs=64.0

Q ss_pred             cccccchhHHHHHhcCCCCCCCchhhHHhhhhhhCCcccCCCCCCCceEEEccCCceEEccCCCCcccCCCceeecCCCC
Q psy2787           2 SANFAELNAFQENYTEPCRKPLPPERRGYGTFSVNNICSCQFSSSSLLILFFSSSSSSSGDFGMMRYSQNDCYVMTERKP   81 (251)
Q Consensus         2 ~~e~~~l~~l~~~~~~~~~~~~~~~~~gl~~lH~~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~~~~~~~~~~~~~~   81 (251)
                      .+||++...+..........++.|++.|++|||++||+||||||+|  |++++++ ++|+|||+|.....+.........
T Consensus        88 vme~~~~~~~~~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~N--ILv~~~~-~~liDFG~a~~~~~~~~~~~l~rd  164 (191)
T d1zara2          88 LMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYN--VLVSEEG-IWIIDFPQSVEVGEEGWREILERD  164 (191)
T ss_dssp             EEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTS--EEEETTE-EEECCCTTCEETTSTTHHHHHHHH
T ss_pred             EEEeeccccccchhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhh--eeeeCCC-EEEEECCCcccCCCCCcHHHHHHH
Confidence            4566665555443333444567889999999999999999999999  8888654 889999999765433211000000


Q ss_pred             cCcccCCCcccCCCCCCchhHHHHHHHH
Q psy2787          82 LPCPWCPMESLKHNQFSQASDAWMFGVT  109 (251)
Q Consensus        82 ~~~~y~aPE~~~~~~~~~~~Di~S~G~i  109 (251)
                      .+  .+ .+.+ ...|+.++|+||..--
T Consensus       165 ~~--~~-~~~f-~r~y~~~~d~~s~~~~  188 (191)
T d1zara2         165 VR--NI-ITYF-SRTYRTEKDINSAIDR  188 (191)
T ss_dssp             HH--HH-HHHH-HHHHCCCCCHHHHHHH
T ss_pred             HH--HH-HHHH-cCCCCCcccHHHHHHH
Confidence            00  00 0111 2346788899997543

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.28  E-value=9e-05  Score=45.17  Aligned_cols=47  Identities=30%  Similarity=0.654  Sum_probs=41.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++...+..||.|++.++.+.|.||.+.+.+.
T Consensus        22 ~~~~eLsf~~GD~i~Vl~~~~~~gWw~G~~~~~g~~G~fP~nyVePy   68 (69)
T d1gcqc_          22 AFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   68 (69)
T ss_dssp             GCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CCCCEeeEcCCCEEEEEEEecCCCEEEEEECCCCCEEEEeHHHEEEc
Confidence            44567999999999999888888899999999999999999988763

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.96  E-value=0.0029  Score=38.55  Aligned_cols=50  Identities=18%  Similarity=0.319  Sum_probs=42.1

Q ss_pred             CCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         195 EGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      ...+.+..++.+.+++...+.-||.+.+.++.+.|.||.+.+..+...++
T Consensus        22 ~deLsf~~Gd~i~vl~~~~~~gW~~g~~~~~g~~G~fP~nyVe~i~~pss   71 (72)
T d1spka_          22 KTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSGPSS   71 (72)
T ss_dssp             SSBCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSSCCC
T ss_pred             CCEeeEcCCCEEEEEEeecCCCeEEEEECCCCCEEEEchhhEEECCCCCC
Confidence            34688999999999887777789999988889999999999998866443

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.64  E-value=0.013  Score=33.56  Aligned_cols=46  Identities=26%  Similarity=0.611  Sum_probs=38.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      ..+..+.+..++.+.+++... ..||.+.+.++.+.|.+|.+.+.++
T Consensus        12 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~~~~g~~G~vP~~yv~pv   57 (57)
T d1efna_          12 ITEDDLSFHKGEKFQILNSSE-GDWWEARSLTTGETGYIPSNYVAPV   57 (57)
T ss_dssp             SSTTBCCBCTTCEEEEEECSS-CSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CCcCCcCCCCCCEEEEEEecC-CCCEEEEECCCCCEEEEeHHHeEEC
Confidence            456678999999999998665 4699999889999999999987653

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.54  E-value=0.012  Score=34.74  Aligned_cols=47  Identities=28%  Similarity=0.581  Sum_probs=39.3

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      .....+.+..|+.+.+++... ..||.+.+.++.+.|.+|.+.+..+.
T Consensus        14 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~~~~g~~G~vP~~yv~~~~   60 (64)
T d1fmka1          14 RTETDLSFKKGERLQIVNNTE-GDWWLAHSLSTGQTGYIPSNYVAPSD   60 (64)
T ss_dssp             CSSSBCCBCTTCEEEESCCCS-SSEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             cCcCCcCCCCCCEEEEEEEcC-CCcEEEEECCCCCEEEEehHHeEECc
Confidence            455678999999999887665 46999999889999999999888654

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=94.16  E-value=0.021  Score=32.88  Aligned_cols=45  Identities=29%  Similarity=0.474  Sum_probs=37.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      ..+..+.+..|+.+.+++... ..||.+...++.+.|.+|.+.++-
T Consensus        12 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~~~~g~~G~~P~~yVe~   56 (58)
T d1jo8a_          12 AEDNELTFVENDKIINIEFVD-DDWWLGELEKDGSKGLFPSNYVSL   56 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEECCS-SSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CCcCCcCCCCCCEEEEEEEcC-CCEEEEEECCCCCEEEEchHHEEE
Confidence            456679999999999888765 579999998999999999997764

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=94.16  E-value=0.0075  Score=47.44  Aligned_cols=30  Identities=13%  Similarity=0.220  Sum_probs=26.5

Q ss_pred             CCcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          36 NNICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        36 ~~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .|+||+|+.+.|  ++++.+...-|.||+.+.
T Consensus       183 ~giIHgDl~~dN--vl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDN--VFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGG--EEEETTEEEEECCCTTCE
T ss_pred             cccccCCcchhh--hhcccccceeEecccccc
Confidence            379999999999  999988877899999764

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.83  E-value=0.029  Score=33.68  Aligned_cols=51  Identities=22%  Similarity=0.378  Sum_probs=40.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .....+.+..++.+.+++...+.-||.+++ ++.+.|.||.+.+..+....+
T Consensus        18 ~~~~ELs~~~Gd~i~vl~~~~~~~W~~~~~-~~g~~G~~P~~yve~~~~~~~   68 (71)
T d1k9aa1          18 TAEQDLPFCKGDVLTIVAVTKDPNWYKAKN-KVGREGIIPANYVQKREGVKA   68 (71)
T ss_dssp             SSSSBCCBCTTCEEEEEEECSSTTEEEEEC-TTCCEEEEEGGGEEECCCCCC
T ss_pred             CCCCCccCCCCCEEEEeEeccCCCEEEEEe-CCCCEEEEchHHeEEcccCCC
Confidence            456678999999999998777677888875 577899999999987765444

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.81  E-value=0.045  Score=32.38  Aligned_cols=51  Identities=24%  Similarity=0.563  Sum_probs=40.6

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQPD  245 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  245 (251)
                      .....+.+..++.+.+++... ..||.+++ ...+.|.||.+.+..+...+.+
T Consensus        14 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~-~~g~~G~~P~~yV~~~~~~~~~   64 (67)
T d1gl5a_          14 TEAHDLRLERGQEYIILEKND-LHWWRARD-KYGSEGYIPSNYVTGKKSNNLD   64 (67)
T ss_dssp             SSSSBCCBCTTCEEEEEECSS-SSEEEEEC-SSSCEEEEETTSEESSTTTTTS
T ss_pred             CCcCCcCCCCCCEEEEEEecC-CCcEEEEE-CCCCEEEEEhHHeEEecCCCcc
Confidence            456678999999999998764 56999986 4567899999999887766553

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.55  E-value=0.03  Score=32.04  Aligned_cols=44  Identities=30%  Similarity=0.733  Sum_probs=35.7

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      ..+..+.+..++.+.+++...+ .||.++.  ..+.|.||.+.+.++
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~~~-~Ww~g~~--~g~~G~~P~~yve~i   56 (57)
T d1utia_          13 LEEDELGFRSGEVVEVLDSSNP-SWWTGRL--HNKLGLFPANYVAPM   56 (57)
T ss_dssp             CSTTBCCBCTTCEEEEEECCSS-SEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CCcCCcCCCCCCEEEEeEEcCC-CEEEEEE--CCcEEEEEHHHEEEc
Confidence            4556788999999999987764 6999985  468899999988764

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.35  E-value=0.031  Score=32.91  Aligned_cols=46  Identities=30%  Similarity=0.612  Sum_probs=38.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      ..+..+.+..++.+.+++..  ..||.+.+.++.+.|.||.+.+..+.
T Consensus        16 ~~~~eLs~~~Gd~i~v~~~~--~~ww~~~~~~~g~~G~vP~~yv~~~~   61 (65)
T d1qcfa1          16 IHHEDLSFQKGDQMVVLEES--GEWWKARSLATRKEGYIPSNYVARVD   61 (65)
T ss_dssp             CSTTBCCBCTTCEEEEEECC--TTEEEEEETTTCCEEEEEGGGEEETT
T ss_pred             CCcCccCCCCCCEEEEEEEC--CCCEEEEEccCCCEEEEchHHeEECc
Confidence            45667999999999999754  45999998888999999999887653

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.98  E-value=0.037  Score=32.18  Aligned_cols=45  Identities=33%  Similarity=0.656  Sum_probs=36.7

Q ss_pred             cccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      ...+..+.+..++.+.+++...  .||.+.+..+.+.|.||.+.+..
T Consensus        17 a~~~~eLs~~~Gd~i~v~~~~~--~ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1          17 PSHDGDLGFEKGEQLRILEQSG--EWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             CCSTTBCCBCTTCEEEEEECCS--SEEEEEETTTCCEEEEEGGGEEE
T ss_pred             cCCcCCcCCCCCCEEEEeEEcC--CCEEEEeccCCeEeEEcHHHEEe
Confidence            3456779999999999998764  48888888889999999987653

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.78  E-value=0.02  Score=33.20  Aligned_cols=45  Identities=22%  Similarity=0.433  Sum_probs=37.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      ..+..+.+..++.+.+++.. +..||.+.+.++.+.|.+|.+.++.
T Consensus        15 ~~~~eLs~~~Gd~i~v~~~~-~~~W~~~~~~~~g~~G~vP~nyve~   59 (60)
T d1arka_          15 ADADEVSFKDGDAIINVQAI-DEGWMYGTVQRTGRTGMLPANYVEA   59 (60)
T ss_dssp             SSSSBCCCCTTCEECCSEEC-SSSEEEEECTTTCCEEEEETTTCEE
T ss_pred             CCCCCcCCCCCCEEEEEEEc-CCCEEEEEECCCCCEEEEcHHHEEE
Confidence            35567889999999888765 4679999998999999999998764

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.75  E-value=0.047  Score=31.04  Aligned_cols=44  Identities=39%  Similarity=0.813  Sum_probs=35.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..|+.+.+++... ..||.++.  ..+.|.||.+.++++
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_          13 QEDGELGFRRGDFIHVMDNSD-PNWWKGAC--HGQTGMFPRNYVTPV   56 (56)
T ss_dssp             CSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CCcCCcCCCCCCEEEEEEecC-CCEEEEEE--CCeEEEEEHhHEEEC
Confidence            455678899999999998774 67999986  478899999988764

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.63  E-value=0.043  Score=31.33  Aligned_cols=46  Identities=20%  Similarity=0.453  Sum_probs=36.6

Q ss_pred             cccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      ...+..+.+..|+.+.+++...+.-||.++.  ..+.|.+|.+.++++
T Consensus        11 a~~~~eLs~~~Gd~i~vl~~~~~~~W~~~~~--~g~~G~~P~~yv~~v   56 (57)
T d1opka1          11 ASGDNTLSITKGEKLRVLGYNHNGEWCEAQT--KNGQGWVPSNYITPV   56 (57)
T ss_dssp             CCSTTBCCBCTTCEEEEEEECTTSSEEEEEC--SSCEEEEEGGGEEES
T ss_pred             CCCcCCcCCCCCCEEEEeEecCCCCEEEEEE--CCCEeEEchhheEEC
Confidence            3456788999999999998877777888874  456799999987654

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.59  E-value=0.051  Score=30.81  Aligned_cols=45  Identities=24%  Similarity=0.473  Sum_probs=36.6

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++.....-||.+...++.+.|.||.+-+.
T Consensus        11 ~~~~ELs~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~nyve   55 (56)
T d1zuua1          11 KDDDEITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   55 (56)
T ss_dssp             CSTTBCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             CCCCEeeECCCCEEEEEEEecCCCcEEEeCCCCceEEEEehhhEE
Confidence            445678999999999998877776777777788999999998653

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=92.38  E-value=0.075  Score=32.04  Aligned_cols=51  Identities=12%  Similarity=0.223  Sum_probs=40.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccc----eeeeecccCcccccCcCCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLS----TFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~  244 (251)
                      ..+..+.+..++.+.+++... ..||..++..    ..+.|.+|.+.+.++...++
T Consensus        19 ~~~~eLs~~~Gd~i~vl~~~~-~~Ww~v~~~~~~~~~g~~G~vP~~yve~~~~pss   73 (74)
T d1wfwa_          19 LKENEICVSQGEVVQVLAVNQ-QNMCLVYQPASDHSPAAEGWVPGSILAPFSGPSS   73 (74)
T ss_dssp             CSSSCCCBCTTCEEEEEEECT-TSEEEEEECSCSSSSSEEEEEEGGGCCBCCSTTC
T ss_pred             CCCCCccCccCCEEEEEEEcC-CCCEEEEeCccCCcCCeeeEEchHHeEECCCCCC
Confidence            455679999999999998765 4599887544    35789999999998887654

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=92.16  E-value=0.036  Score=41.88  Aligned_cols=29  Identities=17%  Similarity=0.127  Sum_probs=24.6

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++|+|+.|.|  |++++++.+-|.||+.+.
T Consensus       184 ~l~HgD~~~~N--il~~~~~~~~lIDwe~a~  212 (263)
T d1j7la_         184 VFSHGDLGDSN--IFVKDGKVSGFIDLGRSG  212 (263)
T ss_dssp             EEECSCCCTTS--EEEETTEEEEECCCTTCE
T ss_pred             EEEEeeccCcc--eeecCCceEEEeechhcc
Confidence            38999999999  888877666799998765

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.09  E-value=0.075  Score=31.77  Aligned_cols=49  Identities=24%  Similarity=0.521  Sum_probs=38.7

Q ss_pred             ccCCcccccCCCeEEEecCCCC-CCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPE-CHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+++...+ ..||.+.+. +.+.|.||.+.++.+...
T Consensus        18 ~~~~eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~-~G~~G~vP~~yv~~~~~~   67 (71)
T d1u5sa1          18 VTEEELNFEKGETMEVIEKPENDPEWWKCKNA-RGQVGLVPKNYVVVLSDG   67 (71)
T ss_dssp             CSSSBCCCCSSCCEEEEECCCTTTCEEEEEET-TTEEEEEETTSEEECCCS
T ss_pred             CCCCEeeECCCCEEEEEEcccCCCCeEEEEEC-CCCEEEEChHHEEECCCC
Confidence            4556789999999998876543 469999864 578999999999888654

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.08  E-value=0.067  Score=31.18  Aligned_cols=46  Identities=26%  Similarity=0.541  Sum_probs=36.2

Q ss_pred             cccCCcccccCCCeEEEecCCCC--CCcccccccceeeeecccCcccccC
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPE--CHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      ...+..+.+..++.+.+++...+  ..||.+++  +.+.|.||.+.+..+
T Consensus        15 a~~~~ELs~~~Gd~i~vl~~~~~~~~gW~~g~~--~g~~G~~P~~yv~~~   62 (63)
T d1ycsb2          15 PQNDDELPMKEGDCMTIIHREDEDEIEWWWARL--NDKEGYVPRNLLGLY   62 (63)
T ss_dssp             CSSTTBCCBCSSCEEEECCCCTTSCSSEEEEEE--TTEEEEEEGGGEECC
T ss_pred             CCCCCCcCCCCCCEEEEEEecCCCCCCEEEEEE--CCeEEEEchHHhEeC
Confidence            34566799999999999877643  46999985  578899999987654

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.01  E-value=0.085  Score=30.59  Aligned_cols=46  Identities=20%  Similarity=0.484  Sum_probs=37.2

Q ss_pred             cccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      ......+.+..++.+.+++... ..||.++.  ..+.|.||.+.+.+..
T Consensus        16 a~~~~eLsf~~Gd~i~vl~~~~-~~Ww~g~~--~g~~G~~P~~yVe~~~   61 (62)
T d1k4us_          16 ATQPEDLEFQEGDIILVLSKVN-EEWLEGES--KGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CCSSSBCCBCSSCEEEEEEESS-SSCEEEEC--SSCEEEECGGGCCCSC
T ss_pred             CCCcCCcCCCCCCEEEEeEEcC-CCEEEEEE--CCcEEEEchHHeEECC
Confidence            3456778999999999998775 56999985  5789999999887653

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.91  E-value=0.051  Score=32.65  Aligned_cols=49  Identities=18%  Similarity=0.352  Sum_probs=39.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      ..+..+.+..++.+.+++...+.-||.+..  ..+.|.||.+.+..+...+
T Consensus        22 ~~~~eLs~~~Gd~i~v~~~~~~~~W~~g~~--~g~~G~~P~~yve~i~~ps   70 (72)
T d1ugva_          22 EHDSELSFTAGTVFDNVHPSQEPGWLEGTL--NGKTGLIPENYVEFLSGPS   70 (72)
T ss_dssp             CSSSBCCBCTTCEEBSCCBCSSTTEEEEES--SSCEEEEEGGGEEECCSSC
T ss_pred             CCCCEecCCCCCEEEEeeccCCCCEEEEEe--CCCEEEEchHHEEECCCCC
Confidence            445678999999999888877777888874  4688999999998876554

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.87  E-value=0.09  Score=32.14  Aligned_cols=53  Identities=19%  Similarity=0.436  Sum_probs=42.0

Q ss_pred             cccCCcccccCCCeEEEecCCCCCCcccccc---cceeeeecccCcccccCcCCCCC
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPECHWWKGQN---LSTFNIGMFPRNIMDPMRRKQPD  245 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~~~~~~~~~  245 (251)
                      ...+..+.+..++.+.+++... ..||.+..   .++.+.|.||...++.+.....+
T Consensus        18 ~~~~~eLs~~~Gd~i~Vl~~~~-~~Ww~g~~~~~~~~~~~G~~P~~yv~~~~~~~~~   73 (80)
T d1ue9a_          18 ASGSEQLSLAPGQLILILKKNT-SGWWQGELQARGKKRQKGWFPASHVKLLGPSSER   73 (80)
T ss_dssp             CCSTTBCCCCTTCEEEEEEECS-SSEEEEEECSCCSSCCEEEEETTSEEECCSCCSS
T ss_pred             CCCCCEeeEcCCCEEEEEEEeC-CCeEEEEEccCCCCCCEeEEEheeEEECCCCCCC
Confidence            3456789999999999998764 57999874   56778899999999887766553

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.85  E-value=0.12  Score=32.81  Aligned_cols=50  Identities=20%  Similarity=0.335  Sum_probs=39.3

Q ss_pred             cCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         194 EEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      .+..+.+..++.+.+++...+.-||.+.. ...+.|+||.+.+..+.....
T Consensus        36 ~e~ELsf~~Gd~i~v~~~~~~~gW~~~~~-~~G~~G~~P~nyve~~~~~~~   85 (96)
T d1wiea_          36 PEAELPLTAGKYLYVYGDMDEDGFYEGEL-LDGQRGLVPSNFVDFVQDNES   85 (96)
T ss_dssp             TTTBCCCCTTCEEEEESSCCSSSCCEEEE-TTCCBCBCCTTSEECCCSCCC
T ss_pred             CCcEeeEcCCCEEEEEEeeCCCceEEEEe-CCCCEEEEehHHeEECCCccc
Confidence            35679999999999998777666777653 456789999999998876654

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=91.69  E-value=0.077  Score=29.93  Aligned_cols=43  Identities=16%  Similarity=0.450  Sum_probs=35.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      ..+..+.+..|+.+.+++... ..||.++  .+.+.|.+|.+.+..
T Consensus        12 ~~~~eLs~~~Gd~v~v~~~~~-~~Ww~g~--~~g~~G~~P~~yv~~   54 (55)
T d1u06a1          12 KSPREVTMKKGDILTLLNSTN-KDWWKVE--VNDRQGFVPAAYVKK   54 (55)
T ss_dssp             CSTTBCCBCTTCEEEEEECCS-SSEEEEE--ETTEEEEEEGGGEEE
T ss_pred             CCcCCccCCCCCEEEEeEEcC-CCEEEEE--ECCeEEEEeHHHEEE
Confidence            456778999999999998865 5699998  457889999987764

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.53  E-value=0.13  Score=29.29  Aligned_cols=44  Identities=20%  Similarity=0.570  Sum_probs=35.5

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..|+.+.+++... ..||.++.  +.+.|.||.+.++.+
T Consensus        14 ~~~~eLs~~~Gd~i~vl~~~~-~~Ww~~~~--~g~~G~~P~~yve~l   57 (58)
T d1ng2a1          14 TSGSEMALSTGDVVEVVEKSE-SGWWFCQM--KAKRGWIPASFLEPL   57 (58)
T ss_dssp             SSTTCCCBCTTCEEEEEECCT-TSCCEEEE--CCCCCCCCGGGCCCS
T ss_pred             CCCCCcCCCCCCEEEEEEecC-CCeEEEEE--CCCCcEEcHhHEEEC
Confidence            456788899999999998765 66999884  567899999988764

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=91.32  E-value=0.1  Score=29.17  Aligned_cols=43  Identities=19%  Similarity=0.528  Sum_probs=33.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++.. +..||.+++ .+.+.|.+|.+-+.
T Consensus        10 ~~~~eLs~~~Gd~~~vl~~~-~~~Ww~~~~-~~g~~G~vP~~yv~   52 (53)
T d2rn8a1          10 NDPQELALRCDEEYYLLDSS-EIHWWRVQD-KNGHEGYAPSSYLV   52 (53)
T ss_dssp             SSTTBCCCCTTCEEEECCCS-CSSCEEEEC-TTSCEEEECGGGEE
T ss_pred             CCCCeeeECCCCEEEEeEEc-CCCeEEEEe-CCCCEEEEeHHHEe
Confidence            45677899999999998654 467999986 56788999988653

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.21  E-value=0.13  Score=28.76  Aligned_cols=42  Identities=19%  Similarity=0.382  Sum_probs=33.3

Q ss_pred             cccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccc
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIM  236 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  236 (251)
                      ...+..+.+..++.+.+++...+ -||.+.  ...+.|.||.+.+
T Consensus        11 a~~~~eLs~~~Gd~v~vl~~~~~-gWw~g~--~~g~~G~~P~~yv   52 (53)
T d1wlpb1          11 AVEGDEVSLLEGEAVEVIHKLLD-GWWVIR--KDDVTGYFPSMYL   52 (53)
T ss_dssp             CCSSSBCCBCTTCEEEEEECCTT-SSEEEE--SSSCEEEECSTTE
T ss_pred             CCCCCEecCCCCCEEEEEeecCC-ceEEEE--ECCcEeEecHHhC
Confidence            34566789999999999977654 599998  4578899999865

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=91.17  E-value=0.038  Score=41.50  Aligned_cols=29  Identities=14%  Similarity=0.040  Sum_probs=24.7

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMR   67 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~   67 (251)
                      .++|+|+.|.|  |+++.+..+-|+||+.+.
T Consensus       176 ~liHgD~~~~N--vl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         176 VVTHGDACLPN--IMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             EEECSSCCGGG--EEEETTEEEEECCCTTCE
T ss_pred             eEEeCCCCCcc--eEEeCCceEEEEEchhcc
Confidence            37999999999  888877667899998764

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.22  E-value=0.13  Score=30.19  Aligned_cols=47  Identities=21%  Similarity=0.489  Sum_probs=37.3

Q ss_pred             cccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      ...+..+.+..++.+.+++.. +..||.+.+ ...+.|.||.+.+..+.
T Consensus        19 a~~~~eLs~~~Gd~i~v~~~~-~~~Ww~~~~-~~g~~G~vP~~yv~~~~   65 (67)
T d1awwa_          19 PMNANDLQLRKGDEYFILEES-NLPWWRARD-KNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CSSSSSCCCCSSCEEECCCCC-SSSEECCBC-TTSCBCCEETTTBCCSC
T ss_pred             CCCcCCcCCCCCCEEEEEEEc-CCCeEEEEE-CCCCEEEEcHHHeEECc
Confidence            345667899999999988765 467999975 56788999999987764

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=90.17  E-value=0.12  Score=29.40  Aligned_cols=44  Identities=39%  Similarity=0.767  Sum_probs=35.8

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      ..+..+.+..++.+.+++... ..||.++.  ..+.|.||.+.+.++
T Consensus        14 ~~~~eLsf~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yvep~   57 (58)
T d1sema_          14 QESGELAFKRGDVITLINKDD-PNWWEGQL--NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             SSTTBCCBCTTCEEEEEECSS-SSEEEEEE--TTEEEEEEGGGEEEC
T ss_pred             CCcCCcCCCCCCEEEEeEEcC-CCEEEEEE--CCeEEEEEhhhEEEC
Confidence            456788899999999988775 56999985  468899999988764

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.87  E-value=0.14  Score=29.21  Aligned_cols=42  Identities=29%  Similarity=0.779  Sum_probs=34.2

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++... ..||.+++  ....|.||.+.++
T Consensus        14 ~~~~eLsf~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yV~   55 (58)
T d1uj0a_          14 VEDNELTFKHGELITVLDDSD-ANWWQGEN--HRGTGLFPSNFVT   55 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEECCS-SSEEEEEE--TTEEEEEEGGGEE
T ss_pred             CCcCCcCCCCCCEEEEeEEeC-CCEEEEEE--CCeEEEEehHhEe
Confidence            455678999999999988764 57999996  4678999998775

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=89.67  E-value=0.17  Score=28.67  Aligned_cols=44  Identities=23%  Similarity=0.492  Sum_probs=34.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..|+.+.+++... ..||.+++. ..+.|.+|.+.+++
T Consensus        13 ~~~~eLs~~~Gd~i~v~~~~~-~~Ww~~~~~-~g~~G~vP~~yve~   56 (57)
T d1ckaa_          13 NDEEDLPFKKGDILRIRDKPE-EQWWNAEDS-EGKRGMIPVPYVEK   56 (57)
T ss_dssp             SSTTBCCBCTTCEEEEEECSS-SSEEEEECT-TSCEEEEEGGGEEC
T ss_pred             CCcCCcCCCCCCEEEEEEEcC-CCeEEEEEC-CCCEEEEcHHHeEE
Confidence            455678999999999987764 679999865 35789999987754

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.38  E-value=0.1  Score=29.53  Aligned_cols=43  Identities=19%  Similarity=0.515  Sum_probs=29.4

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMD  237 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  237 (251)
                      .....+.+..++.+.+++...+.-||.+.  ...+.|.||.+.++
T Consensus        12 ~~~~ELs~~~Gd~v~v~~~~~~~~W~~~~--~~g~~G~vP~nyve   54 (56)
T d1gria1          12 TADDELSFKRGDILKVLNEECDQNWYKAE--LNGKDGFIPKNYIE   54 (56)
T ss_dssp             CSSSCCCBCTTCEEEC------CCEEEEE--SSSCEEEEEGGGEE
T ss_pred             CCCCCcCCCCCCEEEEEeccCCCCeEEEE--ECCcEEEEehhhEE
Confidence            45567889999999988877777788776  35678999998763

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.31  E-value=0.022  Score=35.47  Aligned_cols=50  Identities=28%  Similarity=0.488  Sum_probs=39.6

Q ss_pred             ccCCcccccCCCeEEEecCCC--------------CCCcccccccceeeeecccCcccccCcCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDP--------------ECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .....+.+..++.+.+.....              +..||.|.+.++.+.|.||.+-+..+...
T Consensus        15 ~~~~eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~nYVe~i~~~   78 (83)
T d1phta_          15 EREEDIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGRK   78 (83)
T ss_dssp             SSTTBCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEEE
T ss_pred             CCCCcccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEehhhEEEcCCc
Confidence            455678899999999886421              23599999999999999999998876543

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.19  E-value=0.18  Score=30.39  Aligned_cols=46  Identities=26%  Similarity=0.546  Sum_probs=37.0

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      ..+..+.+..++.+.+++... .-||+++.  ..+.|.||.+.++.+..
T Consensus        22 ~~~~eLs~~~Gd~i~v~~~~~-~~W~~g~~--~g~~G~~P~~yv~~i~~   67 (76)
T d1ujya_          22 TNEDELSVCKGDIIYVTRVEE-GGWWEGTL--NGRTGWFPSNYVREIKS   67 (76)
T ss_dssp             SSTTSCCBCSSCCEEESSCCS-SSCEEEEE--TTEEEEECTTTSEECCH
T ss_pred             CCCCCccCCCCCEEEEeEEcC-CCEEEEEE--CCcEEEEchHHEEECCC
Confidence            455678999999999988765 56999985  47789999999887653

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.28  E-value=0.13  Score=29.40  Aligned_cols=46  Identities=30%  Similarity=0.601  Sum_probs=36.4

Q ss_pred             cccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCc
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMR  240 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  240 (251)
                      ...+..+.+..++.+.+++..  ..||.+++. ..+.|.+|.+-++.++
T Consensus        12 a~~~~ELs~~~Gd~i~v~~~~--~~ww~~~~~-~g~~G~~P~nyve~i~   57 (59)
T d1i07a_          12 ARNSSELSVMKDDVLEILDDR--RQWWKVRNA-SGDSGFVPNNILDIMR   57 (59)
T ss_dssp             CSSTTBCCBCTTCEEEECGGG--CCEEEEECT-TSCEEEEEGGGEEEEC
T ss_pred             CCCCCeeeEcCCCEEEEEEEc--CCcEEEEEc-CCCEEEECHHHeEECC
Confidence            345677899999999998864  469999864 4689999999888664

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.89  E-value=0.29  Score=29.66  Aligned_cols=49  Identities=18%  Similarity=0.385  Sum_probs=38.7

Q ss_pred             cccCCcccccCCCeEEEecCC---CCCCcccccccceeeeecccCcccccCcCC
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGD---PECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      ...+..+.+..++.+.+++..   ....||.++  ...+.|.||.+.+..+...
T Consensus        24 a~~~~ELs~~~Gd~i~vl~~~~~~~~~~W~~g~--~~g~~G~vP~~yv~~~~~~   75 (79)
T d1uhca_          24 ARNPNELSVSANQKLKILEFKDVTGNTEWWLAE--VNGKKGYVPSNYIRKTESG   75 (79)
T ss_dssp             CCSSSBCCBCTTCEEEEEESCCTTSCTTEEEEE--SSSCEEEEEGGGEEECCSS
T ss_pred             CCCCCCccCCCCCEEEEEEeecCCCCCCEEEEE--ECCCEEEEehhhEEECCCC
Confidence            355678999999999988753   356799997  4678899999999887654

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.75  E-value=0.16  Score=30.10  Aligned_cols=45  Identities=31%  Similarity=0.691  Sum_probs=35.9

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRR  241 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  241 (251)
                      .....+.+..++.+.+++.+  ..||.++.  +.+.|.||...+..+..
T Consensus        20 ~~~~eLs~~~Gd~v~vl~~~--~~Ww~~~~--~g~~G~vP~~yv~~~~~   64 (69)
T d1uhfa_          20 VEPGDLTFTEGEEILVTQKD--GEWWTGSI--GDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             SSSSBCCBCTTCEEEECEEE--TTEEEECS--TTCCEEECGGGCEECCC
T ss_pred             CCcCCcCCCCCCEEEEEEec--CCEEEEEE--CCcEEEEchhhEEECCC
Confidence            44567899999999888764  45999985  47789999999988754

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=87.71  E-value=0.13  Score=41.57  Aligned_cols=29  Identities=14%  Similarity=0.113  Sum_probs=24.8

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      .++|+|+.+.|  |++++++ ++|.||..|..
T Consensus       224 ~LiHGDl~~gN--Ilv~~~~-~~vID~E~a~~  252 (392)
T d2pula1         224 TLIHGDLHTGS--IFASEHE-TKVIDPEFAFY  252 (392)
T ss_dssp             EEECSCCCGGG--EEECSSC-EEECCCTTCEE
T ss_pred             ceeccCCcCCc--eeEcCCc-eEEechhhccc
Confidence            58999999999  8888665 79999988764

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.01  E-value=0.34  Score=30.32  Aligned_cols=50  Identities=14%  Similarity=0.284  Sum_probs=39.1

Q ss_pred             ccccCCcccccCCCeEEEecCCC---CCCcccccccceeeeecccCcccccCcCC
Q psy2787         191 EIDEEGKLYIDAGDQIVIIEGDP---ECHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      .......+.+..++.+.+++...   ...||.++.  ..+.|.||.+.++.+...
T Consensus        27 ~a~~~~eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~--~g~~G~~P~~yv~~~~~~   79 (92)
T d1ug1a_          27 NAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN--GVTKGFVYSSFLKPYNPR   79 (92)
T ss_dssp             CCCSSSCCCCCTTCEEEEEESCCTTSCSSEEEEEC--SSSEEEEEGGGEEECCCC
T ss_pred             CCCCCCeEEEecccEEEEEEcccccccCCceEEEe--cccEEEEEhhhceecCCc
Confidence            44566789999999999988643   467999985  567899999999876433

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=87.01  E-value=0.13  Score=40.24  Aligned_cols=28  Identities=14%  Similarity=0.024  Sum_probs=22.5

Q ss_pred             CcccCCCCCCCceEEEccCCceEEccCCCCcc
Q psy2787          37 NICSCQFSSSSLLILFFSSSSSSSGDFGMMRY   68 (251)
Q Consensus        37 ~iiHrdlkp~ni~il~~~~~~~kl~DFGla~~   68 (251)
                      ++||+|+.+.|  |+.++ + ..+.||+-+..
T Consensus       193 ~liHgDlh~~N--vL~~~-~-~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGN--ILWRD-G-PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGG--EEESS-S-EEECCCTTCCE
T ss_pred             eeecCCCCccc--EEEeC-C-ceEEechhccc
Confidence            68999999999  88864 3 35899997764

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.36  E-value=0.54  Score=29.24  Aligned_cols=49  Identities=24%  Similarity=0.385  Sum_probs=37.5

Q ss_pred             cccCCcccccCCCeEEEecCCCC-CCcccccccceeeeecccCcccccCcCC
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPE-CHWWKGQNLSTFNIGMFPRNIMDPMRRK  242 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~  242 (251)
                      ...+..+.+..++.+.+++.... ..||.+.  .+.+.|.||.+.++.+...
T Consensus        16 ~~~~~ELs~~~Gd~v~Vl~~~~~~~~w~~~~--~~g~~G~~P~~Yve~~~~~   65 (93)
T d1uffa_          16 ARNHDEMSFNSGDIIQVDEKTVGEPGWLYGS--FQGNFGWFPCNYVEKMPSS   65 (93)
T ss_dssp             CCSSSCCCBCTTCEEEECSSCCCSSSEEEEE--ETTEEEEEETTTEEECCSS
T ss_pred             CCCCCCccCcCCCEEEEEEeccCCCCEEEEE--eCCcEEEEchHHEEECCCC
Confidence            34566799999999999987754 4566665  4788999999988876544

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.89  E-value=0.38  Score=30.41  Aligned_cols=48  Identities=25%  Similarity=0.551  Sum_probs=38.1

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      ..+..+.+..++.+.+++... .-||.++.  ..+.|.||.+.++-+...+
T Consensus        46 ~~~~ELsf~~Gd~i~Vl~~~~-~gWw~g~~--~g~~G~~P~nyVe~~~~~~   93 (98)
T d1udla_          46 NNEDELSFSKGQLINVMNKDD-PDWWQGEI--NGVTGLFPSNYVKMTTDSS   93 (98)
T ss_dssp             SSTTSCCCCTTCEEEECBCCS-SSEEBCBS--SSCBCCEETTSEEECCCCS
T ss_pred             CCCCEeeEcCCCEEEEeEecC-CCeEEEEE--CCeEEEEchHHEEECCCCC
Confidence            455678999999999987764 57999984  5788999999987766543

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.76  E-value=0.11  Score=33.69  Aligned_cols=57  Identities=18%  Similarity=0.331  Sum_probs=41.6

Q ss_pred             cccCCcccccCCCeEEEecCC--CCCCccccc------ccceeeeecccCcccccCcCCCCCCcC
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGD--PECHWWKGQ------NLSTFNIGMFPRNIMDPMRRKQPDDIS  248 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~~~~~~~~~p~~~~~~~~~~~~~~~~  248 (251)
                      ......+.+..++.+.+++..  .+..||.|+      ......+|.||.+.+..+.........
T Consensus        32 ~~~~~eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~~~~~~~~~~e   96 (106)
T d1i1ja_          32 APDCRFLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQTLKPGKVD   96 (106)
T ss_dssp             CSSTTBCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEECSCCCEE
T ss_pred             CCCCCCccCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEEccccCccccc
Confidence            345567899999999998753  446799986      244567899999999877665555443

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.43  E-value=0.35  Score=28.88  Aligned_cols=49  Identities=20%  Similarity=0.480  Sum_probs=38.1

Q ss_pred             cccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCCC
Q psy2787         192 IDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQP  244 (251)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  244 (251)
                      ...+..+.+..++.+.+++..  ..||.+..  ..+.|.||.+.+..+.....
T Consensus        21 a~~~~ELs~~~Gd~i~vl~~~--~~ww~g~~--~g~~G~fP~~yve~i~~~~~   69 (74)
T d1j3ta_          21 AKKDNHLNFSKHDIITVLEQQ--ENWWFGEV--HGGRGWFPKSYVKIIPGSES   69 (74)
T ss_dssp             CCSTTBCCBCTTCEEEEEEEC--SSEEEEES--TTCCCEEEGGGEEECCCSTT
T ss_pred             CCCCCEecCCCCCEEEEEEcc--CCeEEEEE--CCcEEEEchhhEEECCCCCC
Confidence            345567999999999999864  46998875  47889999999988765443

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.89  E-value=0.43  Score=28.18  Aligned_cols=49  Identities=24%  Similarity=0.419  Sum_probs=37.6

Q ss_pred             ccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccCcCCC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPMRRKQ  243 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  243 (251)
                      .....+.+..++.+.+++.. +..||.++. +....|.||.+.++.+....
T Consensus        18 ~~~~eLsf~~Gd~i~v~~~~-~~~Ww~g~~-~~~~~G~fP~~yv~~~~~~~   66 (71)
T d2hspa_          18 QREDELTFIKSAIIQNVEKQ-EGGWWRGDY-GGKKQLWFPSNYVEEMVNPE   66 (71)
T ss_dssp             SSSSSCCCCTTCEEBSCCCB-TTTEECCBC-SSCCSCCEETTTCCSCSCCC
T ss_pred             CCcCCccCCCCCEEEEEEec-CCCEEEEEE-CCeEEEEEchHHeEEcCCcc
Confidence            44567889999999988865 478999984 55566899999998875543

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=82.54  E-value=0.19  Score=29.50  Aligned_cols=42  Identities=26%  Similarity=0.586  Sum_probs=32.4

Q ss_pred             CcccccCCCeEEEecCCC----CCCcccccccceeeeecccCccccc
Q psy2787         196 GKLYIDAGDQIVIIEGDP----ECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      ..+.+..++.+.+++...    ...||.+++ .+.+.|.||.+.++-
T Consensus        21 ~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~-~~G~~G~~P~nyve~   66 (67)
T d2v1ra1          21 MEVALKKGDLMAILSKKDPLGRDSDWWKVRT-KNGNIGYIPYNYIEI   66 (67)
T ss_dssp             TBCCBCTTCEEEEEEEECTTSCEEEEEEEEC-TTSCEEEEEGGGEEE
T ss_pred             CEeCCCCCCEEEEEEeecCCCcCCCeEEEEe-CCCCEEEEEHHHEEE
Confidence            369999999998886532    357999975 467889999987754

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.36  E-value=0.53  Score=30.77  Aligned_cols=46  Identities=17%  Similarity=0.303  Sum_probs=36.5

Q ss_pred             ccccCCcccccCCCeEEEecCCCCCCcccccccceeeeecccCcccccC
Q psy2787         191 EIDEEGKLYIDAGDQIVIIEGDPECHWWKGQNLSTFNIGMFPRNIMDPM  239 (251)
Q Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  239 (251)
                      .......+.+..|+.+.+++... ..||.+..  ..+.|.||.+.+..+
T Consensus        24 ~a~~~dELs~~~Gd~i~Vl~~~~-~gWw~g~~--~g~~G~~P~~yv~~~   69 (118)
T d1ng2a2          24 TAVEGDEVSLLEGEAVEVIHKLL-DGWWVIRK--DDVTGYFPSMYLQKS   69 (118)
T ss_dssp             CCCSTTBCCBCTTCEEEEEECCT-TSEEEEEE--TTEEEEEEGGGEEET
T ss_pred             CCCCCCEecCCCCCEEEEeEecC-CCeEEEEE--CCeEEEEehhhEEEC
Confidence            33456788999999999997654 67999984  578899999988654

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=80.81  E-value=0.76  Score=25.83  Aligned_cols=44  Identities=32%  Similarity=0.690  Sum_probs=33.8

Q ss_pred             ccCCcccccCCCeEEEecCCC-CCCcccccccceeeeecccCccccc
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDP-ECHWWKGQNLSTFNIGMFPRNIMDP  238 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~  238 (251)
                      .....+.+..|+.+.+++... ..-||.++.  ..+.|.+|.+.++-
T Consensus        13 ~~~~ELs~~~Gd~v~vl~~~~~~~~W~~~~~--~g~~G~vP~~yve~   57 (58)
T d1oota_          13 EESGDLPFRKGDVITILKKSDSQNDWWTGRV--NGREGIFPANYVEL   57 (58)
T ss_dssp             CSTTBCCBCTTCEEEEEECCSCTTSEEEEEE--TTEEEEEEGGGEEE
T ss_pred             CCCCCccCCCCCEEEEEEeecCCCCEEEEEE--CCcEEEEcHHHEEE
Confidence            445678999999999987664 456888874  56789999987653

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.05  E-value=0.35  Score=29.63  Aligned_cols=47  Identities=23%  Similarity=0.445  Sum_probs=35.4

Q ss_pred             ccCCcccccCCCeEEEecCCC----CCCccccccc--------ceeeeecccCcccccC
Q psy2787         193 DEEGKLYIDAGDQIVIIEGDP----ECHWWKGQNL--------STFNIGMFPRNIMDPM  239 (251)
Q Consensus       193 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~--------~~~~~~~~p~~~~~~~  239 (251)
                      .....+.+..++.+.+++...    +..||.|...        .+.+.|.||.+.+..+
T Consensus        24 ~~~~ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~nyVe~i   82 (83)
T d1bb9a_          24 TDTDELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV   82 (83)
T ss_dssp             SSTTBCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             CCCCEecCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEchhHeEEc
Confidence            455689999999999987754    3459988643        3567899999987654